data_1IJD # _entry.id 1IJD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IJD pdb_00001ijd 10.2210/pdb1ijd/pdb RCSB RCSB013329 ? ? WWPDB D_1000013329 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-10-17 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2023-08-16 6 'Structure model' 1 5 2024-11-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Refinement description' 12 5 'Structure model' 'Structure summary' 13 6 'Structure model' 'Data collection' 14 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' database_PDB_caveat 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site 10 4 'Structure model' struct_site_gen 11 5 'Structure model' chem_comp 12 5 'Structure model' chem_comp_atom 13 5 'Structure model' chem_comp_bond 14 5 'Structure model' database_2 15 5 'Structure model' pdbx_initial_refinement_model 16 6 'Structure model' chem_comp_atom 17 6 'Structure model' chem_comp_bond 18 6 'Structure model' pdbx_entry_details 19 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.mon_nstd_flag' 2 4 'Structure model' '_chem_comp.name' 3 4 'Structure model' '_chem_comp.type' 4 4 'Structure model' '_entity.pdbx_description' 5 4 'Structure model' '_pdbx_entity_nonpoly.name' 6 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id' 7 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 4 'Structure model' '_struct_ref_seq_dif.details' 9 5 'Structure model' '_chem_comp.pdbx_synonyms' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 6 'Structure model' '_chem_comp_atom.pdbx_aromatic_flag' 13 6 'Structure model' '_chem_comp_bond.pdbx_aromatic_flag' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'BCL A 54 HAS WRONG CHIRALITY AT ATOM C13' 2 'BCL C 54 HAS WRONG CHIRALITY AT ATOM C13' 3 'BCL E 54 HAS WRONG CHIRALITY AT ATOM C13' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IJD _pdbx_database_status.recvd_initial_deposition_date 2001-04-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1KZU '1KZU is a spectroscopic variant of the protein' unspecified PDB 1LGH '1LGH is a spectroscopic variant of the protein from a different species of bacteria' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'McLuskey, K.' 1 'Prince, S.M.' 2 'Cogdell, R.J.' 3 'Isaacs, N.W.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;The crystallographic structure of the B800-820 LH3 light-harvesting complex from the purple bacteria Rhodopseudomonas acidophila strain 7050. ; Biochemistry 40 8783 8789 2001 BICHAW US 0006-2960 0033 ? 11467938 10.1021/bi010309a 1 ;Crystallization and Preliminary X-ray Crystallographic Analysis of the B800-820 Light-harvesting Complex from Rhodopseudomonas acidophila Strain 7050 ; 'Acta Crystallogr.,Sect.D' 55 885 887 1999 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444998016059 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McLuskey, K.' 1 ? primary 'Prince, S.M.' 2 ? primary 'Cogdell, R.J.' 3 ? primary 'Isaacs, N.W.' 4 ? 1 'McLuskey, K.' 5 ? 1 'Prince, S.M.' 6 ? 1 'Cogdell, R.J.' 7 ? 1 'Isaacs, N.W.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'LIGHT-HARVESTING PROTEIN B-800/820, ALPHA CHAIN' 5578.656 3 ? ? ? ? 2 polymer nat 'LIGHT-HARVESTING PROTEIN B-800/820, BETA CHAIN' 4731.449 3 ? ? ? ? 3 non-polymer syn 'BACTERIOCHLOROPHYLL A' 911.504 9 ? ? ? ? 4 non-polymer man 'RHODOPINAL GLUCOSIDE' 731.012 3 ? ? ? ? 5 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 3 ? ? ? ? 6 water nat water 18.015 42 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'ANTENNA PIGMENT PROTEIN, ALPHA CHAIN' 2 'ANTENNA PIGMENT PROTEIN, BETA CHAIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(FME)NQGKIWTVVPPAFGLPLMLGAVAITALLVHAAVLTHTTWYAAFLQGGVKKAA' MNQGKIWTVVPPAFGLPLMLGAVAITALLVHAAVLTHTTWYAAFLQGGVKKAA A,C,E ? 2 'polypeptide(L)' no no AEVLTSEQAEELHKHVIDGTRVFLVIAAIAHFLAFTLTPWLH AEVLTSEQAEELHKHVIDGTRVFLVIAAIAHFLAFTLTPWLH B,D,F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'BACTERIOCHLOROPHYLL A' BCL 4 'RHODOPINAL GLUCOSIDE' RPA 5 'octyl beta-D-glucopyranoside' BOG 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 FME n 1 2 ASN n 1 3 GLN n 1 4 GLY n 1 5 LYS n 1 6 ILE n 1 7 TRP n 1 8 THR n 1 9 VAL n 1 10 VAL n 1 11 PRO n 1 12 PRO n 1 13 ALA n 1 14 PHE n 1 15 GLY n 1 16 LEU n 1 17 PRO n 1 18 LEU n 1 19 MET n 1 20 LEU n 1 21 GLY n 1 22 ALA n 1 23 VAL n 1 24 ALA n 1 25 ILE n 1 26 THR n 1 27 ALA n 1 28 LEU n 1 29 LEU n 1 30 VAL n 1 31 HIS n 1 32 ALA n 1 33 ALA n 1 34 VAL n 1 35 LEU n 1 36 THR n 1 37 HIS n 1 38 THR n 1 39 THR n 1 40 TRP n 1 41 TYR n 1 42 ALA n 1 43 ALA n 1 44 PHE n 1 45 LEU n 1 46 GLN n 1 47 GLY n 1 48 GLY n 1 49 VAL n 1 50 LYS n 1 51 LYS n 1 52 ALA n 1 53 ALA n 2 1 ALA n 2 2 GLU n 2 3 VAL n 2 4 LEU n 2 5 THR n 2 6 SER n 2 7 GLU n 2 8 GLN n 2 9 ALA n 2 10 GLU n 2 11 GLU n 2 12 LEU n 2 13 HIS n 2 14 LYS n 2 15 HIS n 2 16 VAL n 2 17 ILE n 2 18 ASP n 2 19 GLY n 2 20 THR n 2 21 ARG n 2 22 VAL n 2 23 PHE n 2 24 LEU n 2 25 VAL n 2 26 ILE n 2 27 ALA n 2 28 ALA n 2 29 ILE n 2 30 ALA n 2 31 HIS n 2 32 PHE n 2 33 LEU n 2 34 ALA n 2 35 PHE n 2 36 THR n 2 37 LEU n 2 38 THR n 2 39 PRO n 2 40 TRP n 2 41 LEU n 2 42 HIS n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Rhodoblastus acidophilus' 1074 Rhodoblastus ? 7050 ? ? ? ? ? ? ? ? ? ? ? ? ? 'Photosynthetic purple bacteria' 2 1 sample ? ? ? 'Rhodoblastus acidophilus' 1074 Rhodoblastus ? 7050 ? ? ? ? ? ? ? ? ? ? ? ? ? 'Photosynthetic purple bacteria' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BCL non-polymer . 'BACTERIOCHLOROPHYLL A' ? 'C55 H74 Mg N4 O6' 911.504 BOG D-saccharide n 'octyl beta-D-glucopyranoside' 'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369 FME 'L-peptide linking' n N-FORMYLMETHIONINE ? 'C6 H11 N O3 S' 177.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RPA saccharide . 'RHODOPINAL GLUCOSIDE' ? 'C46 H66 O7' 731.012 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 FME 1 1 1 FME FME A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 TRP 7 7 7 TRP TRP A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 MET 19 19 19 MET MET A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 GLY 47 47 ? ? ? A . n A 1 48 GLY 48 48 ? ? ? A . n A 1 49 VAL 49 49 ? ? ? A . n A 1 50 LYS 50 50 ? ? ? A . n A 1 51 LYS 51 51 ? ? ? A . n A 1 52 ALA 52 52 ? ? ? A . n A 1 53 ALA 53 53 ? ? ? A . n B 2 1 ALA 1 1 1 ALA ALA B . n B 2 2 GLU 2 2 2 GLU GLU B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 SER 6 6 6 SER SER B . n B 2 7 GLU 7 7 7 GLU GLU B . n B 2 8 GLN 8 8 8 GLN GLN B . n B 2 9 ALA 9 9 9 ALA ALA B . n B 2 10 GLU 10 10 10 GLU GLU B . n B 2 11 GLU 11 11 11 GLU GLU B . n B 2 12 LEU 12 12 12 LEU LEU B . n B 2 13 HIS 13 13 13 HIS HIS B . n B 2 14 LYS 14 14 14 LYS LYS B . n B 2 15 HIS 15 15 15 HIS HIS B . n B 2 16 VAL 16 16 16 VAL VAL B . n B 2 17 ILE 17 17 17 ILE ILE B . n B 2 18 ASP 18 18 18 ASP ASP B . n B 2 19 GLY 19 19 19 GLY GLY B . n B 2 20 THR 20 20 20 THR THR B . n B 2 21 ARG 21 21 21 ARG ARG B . n B 2 22 VAL 22 22 22 VAL VAL B . n B 2 23 PHE 23 23 23 PHE PHE B . n B 2 24 LEU 24 24 24 LEU LEU B . n B 2 25 VAL 25 25 25 VAL VAL B . n B 2 26 ILE 26 26 26 ILE ILE B . n B 2 27 ALA 27 27 27 ALA ALA B . n B 2 28 ALA 28 28 28 ALA ALA B . n B 2 29 ILE 29 29 29 ILE ILE B . n B 2 30 ALA 30 30 30 ALA ALA B . n B 2 31 HIS 31 31 31 HIS HIS B . n B 2 32 PHE 32 32 32 PHE PHE B . n B 2 33 LEU 33 33 33 LEU LEU B . n B 2 34 ALA 34 34 34 ALA ALA B . n B 2 35 PHE 35 35 35 PHE PHE B . n B 2 36 THR 36 36 36 THR THR B . n B 2 37 LEU 37 37 37 LEU LEU B . n B 2 38 THR 38 38 38 THR THR B . n B 2 39 PRO 39 39 39 PRO PRO B . n B 2 40 TRP 40 40 40 TRP TRP B . n B 2 41 LEU 41 41 ? ? ? B . n B 2 42 HIS 42 42 ? ? ? B . n C 1 1 FME 1 1 1 FME FME C . n C 1 2 ASN 2 2 2 ASN ASN C . n C 1 3 GLN 3 3 3 GLN GLN C . n C 1 4 GLY 4 4 4 GLY GLY C . n C 1 5 LYS 5 5 5 LYS LYS C . n C 1 6 ILE 6 6 6 ILE ILE C . n C 1 7 TRP 7 7 7 TRP TRP C . n C 1 8 THR 8 8 8 THR THR C . n C 1 9 VAL 9 9 9 VAL VAL C . n C 1 10 VAL 10 10 10 VAL VAL C . n C 1 11 PRO 11 11 11 PRO PRO C . n C 1 12 PRO 12 12 12 PRO PRO C . n C 1 13 ALA 13 13 13 ALA ALA C . n C 1 14 PHE 14 14 14 PHE PHE C . n C 1 15 GLY 15 15 15 GLY GLY C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 PRO 17 17 17 PRO PRO C . n C 1 18 LEU 18 18 18 LEU LEU C . n C 1 19 MET 19 19 19 MET MET C . n C 1 20 LEU 20 20 20 LEU LEU C . n C 1 21 GLY 21 21 21 GLY GLY C . n C 1 22 ALA 22 22 22 ALA ALA C . n C 1 23 VAL 23 23 23 VAL VAL C . n C 1 24 ALA 24 24 24 ALA ALA C . n C 1 25 ILE 25 25 25 ILE ILE C . n C 1 26 THR 26 26 26 THR THR C . n C 1 27 ALA 27 27 27 ALA ALA C . n C 1 28 LEU 28 28 28 LEU LEU C . n C 1 29 LEU 29 29 29 LEU LEU C . n C 1 30 VAL 30 30 30 VAL VAL C . n C 1 31 HIS 31 31 31 HIS HIS C . n C 1 32 ALA 32 32 32 ALA ALA C . n C 1 33 ALA 33 33 33 ALA ALA C . n C 1 34 VAL 34 34 34 VAL VAL C . n C 1 35 LEU 35 35 35 LEU LEU C . n C 1 36 THR 36 36 36 THR THR C . n C 1 37 HIS 37 37 37 HIS HIS C . n C 1 38 THR 38 38 38 THR THR C . n C 1 39 THR 39 39 39 THR THR C . n C 1 40 TRP 40 40 40 TRP TRP C . n C 1 41 TYR 41 41 41 TYR TYR C . n C 1 42 ALA 42 42 42 ALA ALA C . n C 1 43 ALA 43 43 43 ALA ALA C . n C 1 44 PHE 44 44 44 PHE PHE C . n C 1 45 LEU 45 45 45 LEU LEU C . n C 1 46 GLN 46 46 46 GLN GLN C . n C 1 47 GLY 47 47 ? ? ? C . n C 1 48 GLY 48 48 ? ? ? C . n C 1 49 VAL 49 49 ? ? ? C . n C 1 50 LYS 50 50 ? ? ? C . n C 1 51 LYS 51 51 ? ? ? C . n C 1 52 ALA 52 52 ? ? ? C . n C 1 53 ALA 53 53 ? ? ? C . n D 2 1 ALA 1 1 1 ALA ALA D . n D 2 2 GLU 2 2 2 GLU GLU D . n D 2 3 VAL 3 3 3 VAL VAL D . n D 2 4 LEU 4 4 4 LEU LEU D . n D 2 5 THR 5 5 5 THR THR D . n D 2 6 SER 6 6 6 SER SER D . n D 2 7 GLU 7 7 7 GLU GLU D . n D 2 8 GLN 8 8 8 GLN GLN D . n D 2 9 ALA 9 9 9 ALA ALA D . n D 2 10 GLU 10 10 10 GLU GLU D . n D 2 11 GLU 11 11 11 GLU GLU D . n D 2 12 LEU 12 12 12 LEU LEU D . n D 2 13 HIS 13 13 13 HIS HIS D . n D 2 14 LYS 14 14 14 LYS LYS D . n D 2 15 HIS 15 15 15 HIS HIS D . n D 2 16 VAL 16 16 16 VAL VAL D . n D 2 17 ILE 17 17 17 ILE ILE D . n D 2 18 ASP 18 18 18 ASP ASP D . n D 2 19 GLY 19 19 19 GLY GLY D . n D 2 20 THR 20 20 20 THR THR D . n D 2 21 ARG 21 21 21 ARG ARG D . n D 2 22 VAL 22 22 22 VAL VAL D . n D 2 23 PHE 23 23 23 PHE PHE D . n D 2 24 LEU 24 24 24 LEU LEU D . n D 2 25 VAL 25 25 25 VAL VAL D . n D 2 26 ILE 26 26 26 ILE ILE D . n D 2 27 ALA 27 27 27 ALA ALA D . n D 2 28 ALA 28 28 28 ALA ALA D . n D 2 29 ILE 29 29 29 ILE ILE D . n D 2 30 ALA 30 30 30 ALA ALA D . n D 2 31 HIS 31 31 31 HIS HIS D . n D 2 32 PHE 32 32 32 PHE PHE D . n D 2 33 LEU 33 33 33 LEU LEU D . n D 2 34 ALA 34 34 34 ALA ALA D . n D 2 35 PHE 35 35 35 PHE PHE D . n D 2 36 THR 36 36 36 THR THR D . n D 2 37 LEU 37 37 37 LEU LEU D . n D 2 38 THR 38 38 38 THR THR D . n D 2 39 PRO 39 39 39 PRO PRO D . n D 2 40 TRP 40 40 40 TRP TRP D . n D 2 41 LEU 41 41 ? ? ? D . n D 2 42 HIS 42 42 ? ? ? D . n E 1 1 FME 1 1 1 FME FME E . n E 1 2 ASN 2 2 2 ASN ASN E . n E 1 3 GLN 3 3 3 GLN GLN E . n E 1 4 GLY 4 4 4 GLY GLY E . n E 1 5 LYS 5 5 5 LYS LYS E . n E 1 6 ILE 6 6 6 ILE ILE E . n E 1 7 TRP 7 7 7 TRP TRP E . n E 1 8 THR 8 8 8 THR THR E . n E 1 9 VAL 9 9 9 VAL VAL E . n E 1 10 VAL 10 10 10 VAL VAL E . n E 1 11 PRO 11 11 11 PRO PRO E . n E 1 12 PRO 12 12 12 PRO PRO E . n E 1 13 ALA 13 13 13 ALA ALA E . n E 1 14 PHE 14 14 14 PHE PHE E . n E 1 15 GLY 15 15 15 GLY GLY E . n E 1 16 LEU 16 16 16 LEU LEU E . n E 1 17 PRO 17 17 17 PRO PRO E . n E 1 18 LEU 18 18 18 LEU LEU E . n E 1 19 MET 19 19 19 MET MET E . n E 1 20 LEU 20 20 20 LEU LEU E . n E 1 21 GLY 21 21 21 GLY GLY E . n E 1 22 ALA 22 22 22 ALA ALA E . n E 1 23 VAL 23 23 23 VAL VAL E . n E 1 24 ALA 24 24 24 ALA ALA E . n E 1 25 ILE 25 25 25 ILE ILE E . n E 1 26 THR 26 26 26 THR THR E . n E 1 27 ALA 27 27 27 ALA ALA E . n E 1 28 LEU 28 28 28 LEU LEU E . n E 1 29 LEU 29 29 29 LEU LEU E . n E 1 30 VAL 30 30 30 VAL VAL E . n E 1 31 HIS 31 31 31 HIS HIS E . n E 1 32 ALA 32 32 32 ALA ALA E . n E 1 33 ALA 33 33 33 ALA ALA E . n E 1 34 VAL 34 34 34 VAL VAL E . n E 1 35 LEU 35 35 35 LEU LEU E . n E 1 36 THR 36 36 36 THR THR E . n E 1 37 HIS 37 37 37 HIS HIS E . n E 1 38 THR 38 38 38 THR THR E . n E 1 39 THR 39 39 39 THR THR E . n E 1 40 TRP 40 40 40 TRP TRP E . n E 1 41 TYR 41 41 41 TYR TYR E . n E 1 42 ALA 42 42 42 ALA ALA E . n E 1 43 ALA 43 43 43 ALA ALA E . n E 1 44 PHE 44 44 44 PHE PHE E . n E 1 45 LEU 45 45 45 LEU LEU E . n E 1 46 GLN 46 46 46 GLN GLN E . n E 1 47 GLY 47 47 ? ? ? E . n E 1 48 GLY 48 48 ? ? ? E . n E 1 49 VAL 49 49 ? ? ? E . n E 1 50 LYS 50 50 ? ? ? E . n E 1 51 LYS 51 51 ? ? ? E . n E 1 52 ALA 52 52 ? ? ? E . n E 1 53 ALA 53 53 ? ? ? E . n F 2 1 ALA 1 1 1 ALA ALA F . n F 2 2 GLU 2 2 2 GLU GLU F . n F 2 3 VAL 3 3 3 VAL VAL F . n F 2 4 LEU 4 4 4 LEU LEU F . n F 2 5 THR 5 5 5 THR THR F . n F 2 6 SER 6 6 6 SER SER F . n F 2 7 GLU 7 7 7 GLU GLU F . n F 2 8 GLN 8 8 8 GLN GLN F . n F 2 9 ALA 9 9 9 ALA ALA F . n F 2 10 GLU 10 10 10 GLU GLU F . n F 2 11 GLU 11 11 11 GLU GLU F . n F 2 12 LEU 12 12 12 LEU LEU F . n F 2 13 HIS 13 13 13 HIS HIS F . n F 2 14 LYS 14 14 14 LYS LYS F . n F 2 15 HIS 15 15 15 HIS HIS F . n F 2 16 VAL 16 16 16 VAL VAL F . n F 2 17 ILE 17 17 17 ILE ILE F . n F 2 18 ASP 18 18 18 ASP ASP F . n F 2 19 GLY 19 19 19 GLY GLY F . n F 2 20 THR 20 20 20 THR THR F . n F 2 21 ARG 21 21 21 ARG ARG F . n F 2 22 VAL 22 22 22 VAL VAL F . n F 2 23 PHE 23 23 23 PHE PHE F . n F 2 24 LEU 24 24 24 LEU LEU F . n F 2 25 VAL 25 25 25 VAL VAL F . n F 2 26 ILE 26 26 26 ILE ILE F . n F 2 27 ALA 27 27 27 ALA ALA F . n F 2 28 ALA 28 28 28 ALA ALA F . n F 2 29 ILE 29 29 29 ILE ILE F . n F 2 30 ALA 30 30 30 ALA ALA F . n F 2 31 HIS 31 31 31 HIS HIS F . n F 2 32 PHE 32 32 32 PHE PHE F . n F 2 33 LEU 33 33 33 LEU LEU F . n F 2 34 ALA 34 34 34 ALA ALA F . n F 2 35 PHE 35 35 35 PHE PHE F . n F 2 36 THR 36 36 36 THR THR F . n F 2 37 LEU 37 37 37 LEU LEU F . n F 2 38 THR 38 38 38 THR THR F . n F 2 39 PRO 39 39 39 PRO PRO F . n F 2 40 TRP 40 40 40 TRP TRP F . n F 2 41 LEU 41 41 ? ? ? F . n F 2 42 HIS 42 42 ? ? ? F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 BCL 1 54 1 BCL BCL A . H 3 BCL 1 55 7 BCL BCL A . I 4 RPA 1 43 10 RPA RPA B . J 5 BOG 1 44 13 BOG BOG B . K 3 BCL 1 45 2 BCL BCL B . L 3 BCL 1 54 3 BCL BCL C . M 3 BCL 1 55 8 BCL BCL C . N 4 RPA 1 43 11 RPA RPA D . O 5 BOG 1 44 14 BOG BOG D . P 3 BCL 1 45 4 BCL BCL D . Q 3 BCL 1 54 5 BCL BCL E . R 3 BCL 1 55 9 BCL BCL E . S 4 RPA 1 43 12 RPA RPA F . T 5 BOG 1 44 15 BOG BOG F . U 3 BCL 1 45 6 BCL BCL F . V 6 HOH 1 102 102 HOH HOH A . V 6 HOH 2 105 105 HOH HOH A . V 6 HOH 3 108 108 HOH HOH A . V 6 HOH 4 109 109 HOH HOH A . V 6 HOH 5 110 100 HOH HOH A . V 6 HOH 6 111 111 HOH HOH A . V 6 HOH 7 112 112 HOH HOH A . V 6 HOH 8 113 113 HOH HOH A . V 6 HOH 9 123 123 HOH HOH A . W 6 HOH 1 100 100 HOH HOH B . W 6 HOH 2 101 101 HOH HOH B . W 6 HOH 3 104 104 HOH HOH B . W 6 HOH 4 106 106 HOH HOH B . W 6 HOH 5 107 107 HOH HOH B . W 6 HOH 6 121 121 HOH HOH B . W 6 HOH 7 137 137 HOH HOH B . X 6 HOH 1 103 103 HOH HOH C . X 6 HOH 2 114 114 HOH HOH C . X 6 HOH 3 116 116 HOH HOH C . X 6 HOH 4 119 119 HOH HOH C . X 6 HOH 5 122 122 HOH HOH C . X 6 HOH 6 124 124 HOH HOH C . X 6 HOH 7 125 125 HOH HOH C . X 6 HOH 8 126 126 HOH HOH C . X 6 HOH 9 127 127 HOH HOH C . Y 6 HOH 1 115 115 HOH HOH D . Y 6 HOH 2 118 118 HOH HOH D . Y 6 HOH 3 120 120 HOH HOH D . Y 6 HOH 4 135 135 HOH HOH D . Z 6 HOH 1 117 117 HOH HOH E . Z 6 HOH 2 128 128 HOH HOH E . Z 6 HOH 3 130 130 HOH HOH E . Z 6 HOH 4 131 131 HOH HOH E . Z 6 HOH 5 133 133 HOH HOH E . Z 6 HOH 6 136 136 HOH HOH E . Z 6 HOH 7 138 138 HOH HOH E . Z 6 HOH 8 139 139 HOH HOH E . Z 6 HOH 9 140 140 HOH HOH E . Z 6 HOH 10 141 141 HOH HOH E . AA 6 HOH 1 129 129 HOH HOH F . AA 6 HOH 2 132 132 HOH HOH F . AA 6 HOH 3 134 134 HOH HOH F . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 B BOG 44 ? C1 ? J BOG 1 C1 2 1 N 1 B BOG 44 ? C2 ? J BOG 1 C2 3 1 N 1 B BOG 44 ? O2 ? J BOG 1 O2 4 1 N 1 B BOG 44 ? C3 ? J BOG 1 C3 5 1 N 1 B BOG 44 ? O3 ? J BOG 1 O3 6 1 N 1 B BOG 44 ? C4 ? J BOG 1 C4 7 1 N 1 B BOG 44 ? O4 ? J BOG 1 O4 8 1 N 1 B BOG 44 ? C5 ? J BOG 1 C5 9 1 N 1 B BOG 44 ? O5 ? J BOG 1 O5 10 1 N 1 B BOG 44 ? C6 ? J BOG 1 C6 11 1 N 1 B BOG 44 ? O6 ? J BOG 1 O6 12 1 N 1 D BOG 44 ? C1 ? O BOG 1 C1 13 1 N 1 D BOG 44 ? C2 ? O BOG 1 C2 14 1 N 1 D BOG 44 ? O2 ? O BOG 1 O2 15 1 N 1 D BOG 44 ? C3 ? O BOG 1 C3 16 1 N 1 D BOG 44 ? O3 ? O BOG 1 O3 17 1 N 1 D BOG 44 ? C4 ? O BOG 1 C4 18 1 N 1 D BOG 44 ? O4 ? O BOG 1 O4 19 1 N 1 D BOG 44 ? C5 ? O BOG 1 C5 20 1 N 1 D BOG 44 ? O5 ? O BOG 1 O5 21 1 N 1 D BOG 44 ? C6 ? O BOG 1 C6 22 1 N 1 D BOG 44 ? O6 ? O BOG 1 O6 23 1 N 1 F BOG 44 ? C1 ? T BOG 1 C1 24 1 N 1 F BOG 44 ? C2 ? T BOG 1 C2 25 1 N 1 F BOG 44 ? O2 ? T BOG 1 O2 26 1 N 1 F BOG 44 ? C3 ? T BOG 1 C3 27 1 N 1 F BOG 44 ? O3 ? T BOG 1 O3 28 1 N 1 F BOG 44 ? C4 ? T BOG 1 C4 29 1 N 1 F BOG 44 ? O4 ? T BOG 1 O4 30 1 N 1 F BOG 44 ? C5 ? T BOG 1 C5 31 1 N 1 F BOG 44 ? O5 ? T BOG 1 O5 32 1 N 1 F BOG 44 ? C6 ? T BOG 1 C6 33 1 N 1 F BOG 44 ? O6 ? T BOG 1 O6 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 RESTRAIN refinement . ? 2 MOSFLM 'data reduction' . ? 3 CCP4 'data scaling' '(TRUNCATE)' ? 4 # _cell.entry_id 1IJD _cell.length_a 117.260 _cell.length_b 117.260 _cell.length_c 295.920 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 54 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IJD _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # _exptl.entry_id 1IJD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.89 _exptl_crystal.density_percent_sol 74 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.2 _exptl_crystal_grow.pdbx_details 'potassium phosphate, benzamidine HCl, B-Octyl glucoside, sodium chloride, pH 9.2, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 1,2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' MARRESEARCH 1999-08-29 'vertically focussing Rh coated Si mirror' 2 'IMAGE PLATE' MARRESEARCH 1999-11-23 'vertically focussing Rh coated Si mirror' # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'triangular single crystal Si monochromator' 'SINGLE WAVELENGTH' x-ray 2 1 M 'triangular single crystal Si monochromator' 'SINGLE WAVELENGTH' x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.87 _diffrn_radiation_wavelength.wt 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SRS BEAMLINE PX9.6' SRS PX9.6 ? 0.87 2 SYNCHROTRON 'SRS BEAMLINE PX9.6' SRS PX9.6 ? 0.87 # _reflns.entry_id 1IJD _reflns.observed_criterion_sigma_I -5.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 42.0 _reflns.d_resolution_high 2.8 _reflns.number_obs 18970 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.0900000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.6 _reflns.B_iso_Wilson_estimate 47 _reflns.pdbx_redundancy 3.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.87 _reflns_shell.percent_possible_all 94.7 _reflns_shell.Rmerge_I_obs 0.6100000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 1IJD _refine.ls_number_reflns_obs 15220 _refine.ls_number_reflns_all 16042 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 42.0 _refine.ls_d_res_high 3.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2430000 _refine.ls_R_factor_R_free 0.2560000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 770 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 46.4 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model '1KZU (LH2 complex from Rps. acidophila strain 10050)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber for protein, for cofactors; geometry derived from small molecule structures' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ;equivalent hkl's as for 1KZU ; _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1IJD _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs 0.36 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2001 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 780 _refine_hist.number_atoms_solvent 42 _refine_hist.number_atoms_total 2823 _refine_hist.d_res_high 3.0 _refine_hist.d_res_low 42.0 # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 3.0 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.3360000 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3760000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 110 _refine_ls_shell.number_reflns_obs 2324 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1IJD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IJD _struct.title 'Crystallographic Structure of the LH3 Complex from Rhodopseudomonas acidophila strain 7050' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IJD _struct_keywords.pdbx_keywords PHOTOSYNTHESIS _struct_keywords.text 'Pigment-protein complex, alpha-helix apoproteins, intergral membrane protein, light harvesting, PHOTOSYNTHESIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 5 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 4 ? O N N 5 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 4 ? T N N 5 ? U N N 3 ? V N N 6 ? W N N 6 ? X N N 6 ? Y N N 6 ? Z N N 6 ? AA N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP LHA1_RHOAC 1 P35089 1 MNQGKIWTVVPPAFGLPLMLGAVAITALLVHAAVLTHTTWYAAFLQGGVKKAA ? 2 UNP LHB1_RHOAC 2 P35094 1 AEVLTSEQAEELHKHVIDGTRVFLVIAAIAHFLAFTLTPWLH ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1IJD A 1 ? 53 ? P35089 1 ? 53 ? 1 53 2 1 1IJD C 1 ? 53 ? P35089 1 ? 53 ? 1 53 3 1 1IJD E 1 ? 53 ? P35089 1 ? 53 ? 1 53 4 2 1IJD B 1 ? 42 ? P35094 1 ? 42 ? 1 42 5 2 1IJD D 1 ? 42 ? P35094 1 ? 42 ? 1 42 6 2 1IJD F 1 ? 42 ? P35094 1 ? 42 ? 1 42 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1IJD FME A 1 ? UNP P35089 MET 1 'modified residue' 1 1 2 1IJD FME C 1 ? UNP P35089 MET 1 'modified residue' 1 2 3 1IJD FME E 1 ? UNP P35089 MET 1 'modified residue' 1 3 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? hexameric 6 2 software_defined_assembly PISA,PQS octadecameric 18 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 98360 ? 2 MORE -618 ? 2 'SSA (A^2)' 26720 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 2 1,2,3 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 3 ? VAL A 9 ? GLN A 3 VAL A 9 5 ? 7 HELX_P HELX_P2 2 PRO A 11 ? HIS A 37 ? PRO A 11 HIS A 37 1 ? 27 HELX_P HELX_P3 3 THR A 39 ? LEU A 45 ? THR A 39 LEU A 45 1 ? 7 HELX_P HELX_P4 4 THR B 5 ? LEU B 37 ? THR B 5 LEU B 37 1 ? 33 HELX_P HELX_P5 5 GLN C 3 ? VAL C 9 ? GLN C 3 VAL C 9 5 ? 7 HELX_P HELX_P6 6 PRO C 11 ? HIS C 37 ? PRO C 11 HIS C 37 1 ? 27 HELX_P HELX_P7 7 THR C 39 ? LEU C 45 ? THR C 39 LEU C 45 1 ? 7 HELX_P HELX_P8 8 THR D 5 ? LEU D 37 ? THR D 5 LEU D 37 1 ? 33 HELX_P HELX_P9 9 GLN E 3 ? VAL E 9 ? GLN E 3 VAL E 9 5 ? 7 HELX_P HELX_P10 10 PRO E 11 ? HIS E 37 ? PRO E 11 HIS E 37 1 ? 27 HELX_P HELX_P11 11 THR E 39 ? LEU E 45 ? THR E 39 LEU E 45 1 ? 7 HELX_P HELX_P12 12 THR F 5 ? LEU F 37 ? THR F 5 LEU F 37 1 ? 33 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A FME 1 C ? ? ? 1_555 A ASN 2 N ? ? A FME 1 A ASN 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? C FME 1 C ? ? ? 1_555 C ASN 2 N ? ? C FME 1 C ASN 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? E FME 1 C ? ? ? 1_555 E ASN 2 N ? ? E FME 1 E ASN 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? metalc1 metalc ? ? A FME 1 O1 ? ? ? 1_555 H BCL . MG ? ? A FME 1 A BCL 55 1_555 ? ? ? ? ? ? ? 2.490 ? ? metalc2 metalc ? ? A HIS 31 NE2 ? ? ? 1_555 G BCL . MG ? ? A HIS 31 A BCL 54 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc3 metalc ? ? B HIS 31 NE2 ? ? ? 1_555 K BCL . MG ? ? B HIS 31 B BCL 45 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc4 metalc ? ? C FME 1 O1 ? ? ? 1_555 M BCL . MG ? ? C FME 1 C BCL 55 1_555 ? ? ? ? ? ? ? 2.490 ? ? metalc5 metalc ? ? C HIS 31 NE2 ? ? ? 1_555 L BCL . MG ? ? C HIS 31 C BCL 54 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc6 metalc ? ? D HIS 31 NE2 ? ? ? 1_555 P BCL . MG ? ? D HIS 31 D BCL 45 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc7 metalc ? ? E FME 1 O1 ? ? ? 1_555 R BCL . MG ? ? E FME 1 E BCL 55 1_555 ? ? ? ? ? ? ? 2.490 ? ? metalc8 metalc ? ? E HIS 31 NE2 ? ? ? 1_555 Q BCL . MG ? ? E HIS 31 E BCL 54 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc9 metalc ? ? F HIS 31 NE2 ? ? ? 1_555 U BCL . MG ? ? F HIS 31 F BCL 45 1_555 ? ? ? ? ? ? ? 2.432 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O1 ? A FME 1 ? A FME 1 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 NA ? H BCL . ? A BCL 55 ? 1_555 95.1 ? 2 O1 ? A FME 1 ? A FME 1 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 NB ? H BCL . ? A BCL 55 ? 1_555 119.9 ? 3 NA ? H BCL . ? A BCL 55 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 NB ? H BCL . ? A BCL 55 ? 1_555 82.4 ? 4 O1 ? A FME 1 ? A FME 1 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 NC ? H BCL . ? A BCL 55 ? 1_555 104.9 ? 5 NA ? H BCL . ? A BCL 55 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 NC ? H BCL . ? A BCL 55 ? 1_555 158.1 ? 6 NB ? H BCL . ? A BCL 55 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 NC ? H BCL . ? A BCL 55 ? 1_555 94.9 ? 7 O1 ? A FME 1 ? A FME 1 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 ND ? H BCL . ? A BCL 55 ? 1_555 83.0 ? 8 NA ? H BCL . ? A BCL 55 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 ND ? H BCL . ? A BCL 55 ? 1_555 96.2 ? 9 NB ? H BCL . ? A BCL 55 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 ND ? H BCL . ? A BCL 55 ? 1_555 157.1 ? 10 NC ? H BCL . ? A BCL 55 ? 1_555 MG ? H BCL . ? A BCL 55 ? 1_555 ND ? H BCL . ? A BCL 55 ? 1_555 77.8 ? 11 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 NA ? G BCL . ? A BCL 54 ? 1_555 88.6 ? 12 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 NB ? G BCL . ? A BCL 54 ? 1_555 89.9 ? 13 NA ? G BCL . ? A BCL 54 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 NB ? G BCL . ? A BCL 54 ? 1_555 89.1 ? 14 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 NC ? G BCL . ? A BCL 54 ? 1_555 107.3 ? 15 NA ? G BCL . ? A BCL 54 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 NC ? G BCL . ? A BCL 54 ? 1_555 164.0 ? 16 NB ? G BCL . ? A BCL 54 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 NC ? G BCL . ? A BCL 54 ? 1_555 93.0 ? 17 NE2 ? A HIS 31 ? A HIS 31 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 ND ? G BCL . ? A BCL 54 ? 1_555 105.4 ? 18 NA ? G BCL . ? A BCL 54 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 ND ? G BCL . ? A BCL 54 ? 1_555 92.8 ? 19 NB ? G BCL . ? A BCL 54 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 ND ? G BCL . ? A BCL 54 ? 1_555 164.7 ? 20 NC ? G BCL . ? A BCL 54 ? 1_555 MG ? G BCL . ? A BCL 54 ? 1_555 ND ? G BCL . ? A BCL 54 ? 1_555 81.1 ? 21 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 NA ? K BCL . ? B BCL 45 ? 1_555 81.4 ? 22 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 NB ? K BCL . ? B BCL 45 ? 1_555 95.8 ? 23 NA ? K BCL . ? B BCL 45 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 NB ? K BCL . ? B BCL 45 ? 1_555 89.2 ? 24 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 NC ? K BCL . ? B BCL 45 ? 1_555 101.2 ? 25 NA ? K BCL . ? B BCL 45 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 NC ? K BCL . ? B BCL 45 ? 1_555 175.2 ? 26 NB ? K BCL . ? B BCL 45 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 NC ? K BCL . ? B BCL 45 ? 1_555 94.4 ? 27 NE2 ? B HIS 31 ? B HIS 31 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 ND ? K BCL . ? B BCL 45 ? 1_555 84.3 ? 28 NA ? K BCL . ? B BCL 45 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 ND ? K BCL . ? B BCL 45 ? 1_555 94.0 ? 29 NB ? K BCL . ? B BCL 45 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 ND ? K BCL . ? B BCL 45 ? 1_555 176.7 ? 30 NC ? K BCL . ? B BCL 45 ? 1_555 MG ? K BCL . ? B BCL 45 ? 1_555 ND ? K BCL . ? B BCL 45 ? 1_555 82.4 ? 31 O1 ? C FME 1 ? C FME 1 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 NA ? M BCL . ? C BCL 55 ? 1_555 95.1 ? 32 O1 ? C FME 1 ? C FME 1 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 NB ? M BCL . ? C BCL 55 ? 1_555 119.9 ? 33 NA ? M BCL . ? C BCL 55 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 NB ? M BCL . ? C BCL 55 ? 1_555 82.3 ? 34 O1 ? C FME 1 ? C FME 1 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 NC ? M BCL . ? C BCL 55 ? 1_555 104.9 ? 35 NA ? M BCL . ? C BCL 55 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 NC ? M BCL . ? C BCL 55 ? 1_555 158.1 ? 36 NB ? M BCL . ? C BCL 55 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 NC ? M BCL . ? C BCL 55 ? 1_555 94.9 ? 37 O1 ? C FME 1 ? C FME 1 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 ND ? M BCL . ? C BCL 55 ? 1_555 83.0 ? 38 NA ? M BCL . ? C BCL 55 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 ND ? M BCL . ? C BCL 55 ? 1_555 96.2 ? 39 NB ? M BCL . ? C BCL 55 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 ND ? M BCL . ? C BCL 55 ? 1_555 157.1 ? 40 NC ? M BCL . ? C BCL 55 ? 1_555 MG ? M BCL . ? C BCL 55 ? 1_555 ND ? M BCL . ? C BCL 55 ? 1_555 77.9 ? 41 NE2 ? C HIS 31 ? C HIS 31 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 NA ? L BCL . ? C BCL 54 ? 1_555 88.6 ? 42 NE2 ? C HIS 31 ? C HIS 31 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 NB ? L BCL . ? C BCL 54 ? 1_555 89.9 ? 43 NA ? L BCL . ? C BCL 54 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 NB ? L BCL . ? C BCL 54 ? 1_555 89.1 ? 44 NE2 ? C HIS 31 ? C HIS 31 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 NC ? L BCL . ? C BCL 54 ? 1_555 107.3 ? 45 NA ? L BCL . ? C BCL 54 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 NC ? L BCL . ? C BCL 54 ? 1_555 163.9 ? 46 NB ? L BCL . ? C BCL 54 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 NC ? L BCL . ? C BCL 54 ? 1_555 93.0 ? 47 NE2 ? C HIS 31 ? C HIS 31 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 ND ? L BCL . ? C BCL 54 ? 1_555 105.3 ? 48 NA ? L BCL . ? C BCL 54 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 ND ? L BCL . ? C BCL 54 ? 1_555 92.8 ? 49 NB ? L BCL . ? C BCL 54 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 ND ? L BCL . ? C BCL 54 ? 1_555 164.7 ? 50 NC ? L BCL . ? C BCL 54 ? 1_555 MG ? L BCL . ? C BCL 54 ? 1_555 ND ? L BCL . ? C BCL 54 ? 1_555 81.1 ? 51 NE2 ? D HIS 31 ? D HIS 31 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 NA ? P BCL . ? D BCL 45 ? 1_555 81.4 ? 52 NE2 ? D HIS 31 ? D HIS 31 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 NB ? P BCL . ? D BCL 45 ? 1_555 95.7 ? 53 NA ? P BCL . ? D BCL 45 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 NB ? P BCL . ? D BCL 45 ? 1_555 89.2 ? 54 NE2 ? D HIS 31 ? D HIS 31 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 NC ? P BCL . ? D BCL 45 ? 1_555 101.3 ? 55 NA ? P BCL . ? D BCL 45 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 NC ? P BCL . ? D BCL 45 ? 1_555 175.2 ? 56 NB ? P BCL . ? D BCL 45 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 NC ? P BCL . ? D BCL 45 ? 1_555 94.4 ? 57 NE2 ? D HIS 31 ? D HIS 31 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 ND ? P BCL . ? D BCL 45 ? 1_555 84.3 ? 58 NA ? P BCL . ? D BCL 45 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 ND ? P BCL . ? D BCL 45 ? 1_555 94.0 ? 59 NB ? P BCL . ? D BCL 45 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 ND ? P BCL . ? D BCL 45 ? 1_555 176.7 ? 60 NC ? P BCL . ? D BCL 45 ? 1_555 MG ? P BCL . ? D BCL 45 ? 1_555 ND ? P BCL . ? D BCL 45 ? 1_555 82.4 ? 61 O1 ? E FME 1 ? E FME 1 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 NA ? R BCL . ? E BCL 55 ? 1_555 95.2 ? 62 O1 ? E FME 1 ? E FME 1 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 NB ? R BCL . ? E BCL 55 ? 1_555 119.9 ? 63 NA ? R BCL . ? E BCL 55 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 NB ? R BCL . ? E BCL 55 ? 1_555 82.4 ? 64 O1 ? E FME 1 ? E FME 1 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 NC ? R BCL . ? E BCL 55 ? 1_555 104.9 ? 65 NA ? R BCL . ? E BCL 55 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 NC ? R BCL . ? E BCL 55 ? 1_555 158.1 ? 66 NB ? R BCL . ? E BCL 55 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 NC ? R BCL . ? E BCL 55 ? 1_555 94.9 ? 67 O1 ? E FME 1 ? E FME 1 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 ND ? R BCL . ? E BCL 55 ? 1_555 83.0 ? 68 NA ? R BCL . ? E BCL 55 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 ND ? R BCL . ? E BCL 55 ? 1_555 96.2 ? 69 NB ? R BCL . ? E BCL 55 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 ND ? R BCL . ? E BCL 55 ? 1_555 157.1 ? 70 NC ? R BCL . ? E BCL 55 ? 1_555 MG ? R BCL . ? E BCL 55 ? 1_555 ND ? R BCL . ? E BCL 55 ? 1_555 77.8 ? 71 NE2 ? E HIS 31 ? E HIS 31 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 NA ? Q BCL . ? E BCL 54 ? 1_555 88.6 ? 72 NE2 ? E HIS 31 ? E HIS 31 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 NB ? Q BCL . ? E BCL 54 ? 1_555 89.9 ? 73 NA ? Q BCL . ? E BCL 54 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 NB ? Q BCL . ? E BCL 54 ? 1_555 89.1 ? 74 NE2 ? E HIS 31 ? E HIS 31 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 NC ? Q BCL . ? E BCL 54 ? 1_555 107.3 ? 75 NA ? Q BCL . ? E BCL 54 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 NC ? Q BCL . ? E BCL 54 ? 1_555 163.9 ? 76 NB ? Q BCL . ? E BCL 54 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 NC ? Q BCL . ? E BCL 54 ? 1_555 93.0 ? 77 NE2 ? E HIS 31 ? E HIS 31 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 ND ? Q BCL . ? E BCL 54 ? 1_555 105.4 ? 78 NA ? Q BCL . ? E BCL 54 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 ND ? Q BCL . ? E BCL 54 ? 1_555 92.8 ? 79 NB ? Q BCL . ? E BCL 54 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 ND ? Q BCL . ? E BCL 54 ? 1_555 164.7 ? 80 NC ? Q BCL . ? E BCL 54 ? 1_555 MG ? Q BCL . ? E BCL 54 ? 1_555 ND ? Q BCL . ? E BCL 54 ? 1_555 81.1 ? 81 NE2 ? F HIS 31 ? F HIS 31 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 NA ? U BCL . ? F BCL 45 ? 1_555 81.4 ? 82 NE2 ? F HIS 31 ? F HIS 31 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 NB ? U BCL . ? F BCL 45 ? 1_555 95.7 ? 83 NA ? U BCL . ? F BCL 45 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 NB ? U BCL . ? F BCL 45 ? 1_555 89.2 ? 84 NE2 ? F HIS 31 ? F HIS 31 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 NC ? U BCL . ? F BCL 45 ? 1_555 101.3 ? 85 NA ? U BCL . ? F BCL 45 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 NC ? U BCL . ? F BCL 45 ? 1_555 175.2 ? 86 NB ? U BCL . ? F BCL 45 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 NC ? U BCL . ? F BCL 45 ? 1_555 94.4 ? 87 NE2 ? F HIS 31 ? F HIS 31 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 ND ? U BCL . ? F BCL 45 ? 1_555 84.3 ? 88 NA ? U BCL . ? F BCL 45 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 ND ? U BCL . ? F BCL 45 ? 1_555 94.0 ? 89 NB ? U BCL . ? F BCL 45 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 ND ? U BCL . ? F BCL 45 ? 1_555 176.7 ? 90 NC ? U BCL . ? F BCL 45 ? 1_555 MG ? U BCL . ? F BCL 45 ? 1_555 ND ? U BCL . ? F BCL 45 ? 1_555 82.4 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 FME A 1 ? . . . . FME A 1 ? 1_555 . . . . . . . MET 1 FME Formylation 'Named protein modification' 2 FME C 1 ? . . . . FME C 1 ? 1_555 . . . . . . . MET 1 FME Formylation 'Named protein modification' 3 FME E 1 ? . . . . FME E 1 ? 1_555 . . . . . . . MET 1 FME Formylation 'Named protein modification' # _pdbx_entry_details.entry_id 1IJD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 E GLN 46 ? ? O E HOH 117 ? ? 0.82 2 1 OE1 C GLN 46 ? ? O C HOH 103 ? ? 0.82 3 1 CD C GLN 46 ? ? O C HOH 103 ? ? 0.85 4 1 CD E GLN 46 ? ? O E HOH 117 ? ? 0.85 5 1 CG E GLN 46 ? ? O E HOH 117 ? ? 1.60 6 1 CG C GLN 46 ? ? O C HOH 103 ? ? 1.60 7 1 NE2 C GLN 46 ? ? O C HOH 103 ? ? 2.14 8 1 NE2 E GLN 46 ? ? O E HOH 117 ? ? 2.14 9 1 O1 E FME 1 ? ? O E HOH 128 ? ? 2.15 10 1 O1 C FME 1 ? ? O C HOH 114 ? ? 2.15 11 1 O1 A FME 1 ? ? O B HOH 100 ? ? 2.15 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OE1 A GLN 46 ? ? 1_555 O E HOH 131 ? ? 3_555 0.82 2 1 CD A GLN 46 ? ? 1_555 O E HOH 131 ? ? 3_555 0.85 3 1 CG A GLN 46 ? ? 1_555 O E HOH 131 ? ? 3_555 1.60 4 1 NE2 A GLN 46 ? ? 1_555 O E HOH 131 ? ? 3_555 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 11 ? ? -58.48 90.94 2 1 PRO A 12 ? ? -37.19 -14.24 3 1 TYR A 41 ? ? -46.89 -70.18 4 1 VAL B 3 ? ? -61.12 -179.45 5 1 LEU B 33 ? ? -38.45 -36.49 6 1 ALA B 34 ? ? -68.86 -81.74 7 1 PHE B 35 ? ? -13.59 -47.23 8 1 LEU B 37 ? ? -88.03 37.90 9 1 PRO C 11 ? ? -58.45 90.93 10 1 PRO C 12 ? ? -37.18 -14.26 11 1 TYR C 41 ? ? -46.93 -70.17 12 1 VAL D 3 ? ? -61.10 -179.46 13 1 LEU D 33 ? ? -38.46 -36.46 14 1 ALA D 34 ? ? -68.87 -81.75 15 1 PHE D 35 ? ? -13.63 -47.20 16 1 LEU D 37 ? ? -88.03 37.86 17 1 PRO E 11 ? ? -58.41 90.90 18 1 PRO E 12 ? ? -37.15 -14.30 19 1 TYR E 41 ? ? -46.94 -70.18 20 1 VAL F 3 ? ? -61.11 -179.45 21 1 LEU F 33 ? ? -38.44 -36.42 22 1 ALA F 34 ? ? -68.95 -81.71 23 1 PHE F 35 ? ? -13.59 -47.24 24 1 LEU F 37 ? ? -88.02 37.86 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C13 ? A BCL 54 ? 'WRONG HAND' . 2 1 C13 ? C BCL 54 ? 'WRONG HAND' . 3 1 C13 ? E BCL 54 ? 'WRONG HAND' . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A FME 1 A FME 1 ? MET N-FORMYLMETHIONINE 2 C FME 1 C FME 1 ? MET N-FORMYLMETHIONINE 3 E FME 1 E FME 1 ? MET N-FORMYLMETHIONINE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 47 ? A GLY 47 2 1 Y 1 A GLY 48 ? A GLY 48 3 1 Y 1 A VAL 49 ? A VAL 49 4 1 Y 1 A LYS 50 ? A LYS 50 5 1 Y 1 A LYS 51 ? A LYS 51 6 1 Y 1 A ALA 52 ? A ALA 52 7 1 Y 1 A ALA 53 ? A ALA 53 8 1 Y 1 B LEU 41 ? B LEU 41 9 1 Y 1 B HIS 42 ? B HIS 42 10 1 Y 1 C GLY 47 ? C GLY 47 11 1 Y 1 C GLY 48 ? C GLY 48 12 1 Y 1 C VAL 49 ? C VAL 49 13 1 Y 1 C LYS 50 ? C LYS 50 14 1 Y 1 C LYS 51 ? C LYS 51 15 1 Y 1 C ALA 52 ? C ALA 52 16 1 Y 1 C ALA 53 ? C ALA 53 17 1 Y 1 D LEU 41 ? D LEU 41 18 1 Y 1 D HIS 42 ? D HIS 42 19 1 Y 1 E GLY 47 ? E GLY 47 20 1 Y 1 E GLY 48 ? E GLY 48 21 1 Y 1 E VAL 49 ? E VAL 49 22 1 Y 1 E LYS 50 ? E LYS 50 23 1 Y 1 E LYS 51 ? E LYS 51 24 1 Y 1 E ALA 52 ? E ALA 52 25 1 Y 1 E ALA 53 ? E ALA 53 26 1 Y 1 F LEU 41 ? F LEU 41 27 1 Y 1 F HIS 42 ? F HIS 42 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BCL MG MG N N 74 BCL CHA C N N 75 BCL CHB C N N 76 BCL CHC C N N 77 BCL CHD C N N 78 BCL NA N N N 79 BCL C1A C N N 80 BCL C2A C N S 81 BCL C3A C N S 82 BCL C4A C N N 83 BCL CMA C N N 84 BCL CAA C N N 85 BCL CBA C N N 86 BCL CGA C N N 87 BCL O1A O N N 88 BCL O2A O N N 89 BCL NB N Y N 90 BCL C1B C Y N 91 BCL C2B C Y N 92 BCL C3B C Y N 93 BCL C4B C Y N 94 BCL CMB C N N 95 BCL CAB C N N 96 BCL OBB O N N 97 BCL CBB C N N 98 BCL NC N N N 99 BCL C1C C N N 100 BCL C2C C N R 101 BCL C3C C N R 102 BCL C4C C N N 103 BCL CMC C N N 104 BCL CAC C N N 105 BCL CBC C N N 106 BCL ND N N N 107 BCL C1D C N N 108 BCL C2D C N N 109 BCL C3D C N N 110 BCL C4D C N N 111 BCL CMD C N N 112 BCL CAD C N N 113 BCL OBD O N N 114 BCL CBD C N R 115 BCL CGD C N N 116 BCL O1D O N N 117 BCL O2D O N N 118 BCL CED C N N 119 BCL C1 C N N 120 BCL C2 C N N 121 BCL C3 C N N 122 BCL C4 C N N 123 BCL C5 C N N 124 BCL C6 C N N 125 BCL C7 C N N 126 BCL C8 C N R 127 BCL C9 C N N 128 BCL C10 C N N 129 BCL C11 C N N 130 BCL C12 C N N 131 BCL C13 C N R 132 BCL C14 C N N 133 BCL C15 C N N 134 BCL C16 C N N 135 BCL C17 C N N 136 BCL C18 C N N 137 BCL C19 C N N 138 BCL C20 C N N 139 BCL HHB H N N 140 BCL HHC H N N 141 BCL HHD H N N 142 BCL H2A H N N 143 BCL H3A H N N 144 BCL HMA1 H N N 145 BCL HMA2 H N N 146 BCL HMA3 H N N 147 BCL HAA1 H N N 148 BCL HAA2 H N N 149 BCL HBA1 H N N 150 BCL HBA2 H N N 151 BCL HMB1 H N N 152 BCL HMB2 H N N 153 BCL HMB3 H N N 154 BCL HBB1 H N N 155 BCL HBB2 H N N 156 BCL HBB3 H N N 157 BCL H2C H N N 158 BCL H3C H N N 159 BCL HMC1 H N N 160 BCL HMC2 H N N 161 BCL HMC3 H N N 162 BCL HAC1 H N N 163 BCL HAC2 H N N 164 BCL HBC1 H N N 165 BCL HBC2 H N N 166 BCL HBC3 H N N 167 BCL HMD1 H N N 168 BCL HMD2 H N N 169 BCL HMD3 H N N 170 BCL HBD H N N 171 BCL HED1 H N N 172 BCL HED2 H N N 173 BCL HED3 H N N 174 BCL H11 H N N 175 BCL H12 H N N 176 BCL H2 H N N 177 BCL H41 H N N 178 BCL H42 H N N 179 BCL H43 H N N 180 BCL H51 H N N 181 BCL H52 H N N 182 BCL H61 H N N 183 BCL H62 H N N 184 BCL H71 H N N 185 BCL H72 H N N 186 BCL H8 H N N 187 BCL H91 H N N 188 BCL H92 H N N 189 BCL H93 H N N 190 BCL H101 H N N 191 BCL H102 H N N 192 BCL H111 H N N 193 BCL H112 H N N 194 BCL H121 H N N 195 BCL H122 H N N 196 BCL H13 H N N 197 BCL H141 H N N 198 BCL H142 H N N 199 BCL H143 H N N 200 BCL H151 H N N 201 BCL H152 H N N 202 BCL H161 H N N 203 BCL H162 H N N 204 BCL H171 H N N 205 BCL H172 H N N 206 BCL H18 H N N 207 BCL H191 H N N 208 BCL H192 H N N 209 BCL H193 H N N 210 BCL H201 H N N 211 BCL H202 H N N 212 BCL H203 H N N 213 BOG C1 C N R 214 BOG O1 O N N 215 BOG C2 C N R 216 BOG O2 O N N 217 BOG C3 C N S 218 BOG O3 O N N 219 BOG C4 C N S 220 BOG O4 O N N 221 BOG C5 C N R 222 BOG O5 O N N 223 BOG C6 C N N 224 BOG O6 O N N 225 BOG "C1'" C N N 226 BOG "C2'" C N N 227 BOG "C3'" C N N 228 BOG "C4'" C N N 229 BOG "C5'" C N N 230 BOG "C6'" C N N 231 BOG "C7'" C N N 232 BOG "C8'" C N N 233 BOG H1 H N N 234 BOG H2 H N N 235 BOG HO2 H N N 236 BOG H3 H N N 237 BOG HO3 H N N 238 BOG H4 H N N 239 BOG HO4 H N N 240 BOG H5 H N N 241 BOG H61 H N N 242 BOG H62 H N N 243 BOG HO6 H N N 244 BOG "H1'1" H N N 245 BOG "H1'2" H N N 246 BOG "H2'1" H N N 247 BOG "H2'2" H N N 248 BOG "H3'1" H N N 249 BOG "H3'2" H N N 250 BOG "H4'1" H N N 251 BOG "H4'2" H N N 252 BOG "H5'1" H N N 253 BOG "H5'2" H N N 254 BOG "H6'1" H N N 255 BOG "H6'2" H N N 256 BOG "H7'1" H N N 257 BOG "H7'2" H N N 258 BOG "H8'1" H N N 259 BOG "H8'2" H N N 260 BOG "H8'3" H N N 261 FME N N N N 262 FME CN C N N 263 FME O1 O N N 264 FME CA C N S 265 FME CB C N N 266 FME CG C N N 267 FME SD S N N 268 FME CE C N N 269 FME C C N N 270 FME O O N N 271 FME OXT O N N 272 FME H H N N 273 FME HCN H N N 274 FME HA H N N 275 FME HB2 H N N 276 FME HB3 H N N 277 FME HG2 H N N 278 FME HG3 H N N 279 FME HE1 H N N 280 FME HE2 H N N 281 FME HE3 H N N 282 FME HXT H N N 283 GLN N N N N 284 GLN CA C N S 285 GLN C C N N 286 GLN O O N N 287 GLN CB C N N 288 GLN CG C N N 289 GLN CD C N N 290 GLN OE1 O N N 291 GLN NE2 N N N 292 GLN OXT O N N 293 GLN H H N N 294 GLN H2 H N N 295 GLN HA H N N 296 GLN HB2 H N N 297 GLN HB3 H N N 298 GLN HG2 H N N 299 GLN HG3 H N N 300 GLN HE21 H N N 301 GLN HE22 H N N 302 GLN HXT H N N 303 GLU N N N N 304 GLU CA C N S 305 GLU C C N N 306 GLU O O N N 307 GLU CB C N N 308 GLU CG C N N 309 GLU CD C N N 310 GLU OE1 O N N 311 GLU OE2 O N N 312 GLU OXT O N N 313 GLU H H N N 314 GLU H2 H N N 315 GLU HA H N N 316 GLU HB2 H N N 317 GLU HB3 H N N 318 GLU HG2 H N N 319 GLU HG3 H N N 320 GLU HE2 H N N 321 GLU HXT H N N 322 GLY N N N N 323 GLY CA C N N 324 GLY C C N N 325 GLY O O N N 326 GLY OXT O N N 327 GLY H H N N 328 GLY H2 H N N 329 GLY HA2 H N N 330 GLY HA3 H N N 331 GLY HXT H N N 332 HIS N N N N 333 HIS CA C N S 334 HIS C C N N 335 HIS O O N N 336 HIS CB C N N 337 HIS CG C Y N 338 HIS ND1 N Y N 339 HIS CD2 C Y N 340 HIS CE1 C Y N 341 HIS NE2 N Y N 342 HIS OXT O N N 343 HIS H H N N 344 HIS H2 H N N 345 HIS HA H N N 346 HIS HB2 H N N 347 HIS HB3 H N N 348 HIS HD1 H N N 349 HIS HD2 H N N 350 HIS HE1 H N N 351 HIS HE2 H N N 352 HIS HXT H N N 353 HOH O O N N 354 HOH H1 H N N 355 HOH H2 H N N 356 ILE N N N N 357 ILE CA C N S 358 ILE C C N N 359 ILE O O N N 360 ILE CB C N S 361 ILE CG1 C N N 362 ILE CG2 C N N 363 ILE CD1 C N N 364 ILE OXT O N N 365 ILE H H N N 366 ILE H2 H N N 367 ILE HA H N N 368 ILE HB H N N 369 ILE HG12 H N N 370 ILE HG13 H N N 371 ILE HG21 H N N 372 ILE HG22 H N N 373 ILE HG23 H N N 374 ILE HD11 H N N 375 ILE HD12 H N N 376 ILE HD13 H N N 377 ILE HXT H N N 378 LEU N N N N 379 LEU CA C N S 380 LEU C C N N 381 LEU O O N N 382 LEU CB C N N 383 LEU CG C N N 384 LEU CD1 C N N 385 LEU CD2 C N N 386 LEU OXT O N N 387 LEU H H N N 388 LEU H2 H N N 389 LEU HA H N N 390 LEU HB2 H N N 391 LEU HB3 H N N 392 LEU HG H N N 393 LEU HD11 H N N 394 LEU HD12 H N N 395 LEU HD13 H N N 396 LEU HD21 H N N 397 LEU HD22 H N N 398 LEU HD23 H N N 399 LEU HXT H N N 400 LYS N N N N 401 LYS CA C N S 402 LYS C C N N 403 LYS O O N N 404 LYS CB C N N 405 LYS CG C N N 406 LYS CD C N N 407 LYS CE C N N 408 LYS NZ N N N 409 LYS OXT O N N 410 LYS H H N N 411 LYS H2 H N N 412 LYS HA H N N 413 LYS HB2 H N N 414 LYS HB3 H N N 415 LYS HG2 H N N 416 LYS HG3 H N N 417 LYS HD2 H N N 418 LYS HD3 H N N 419 LYS HE2 H N N 420 LYS HE3 H N N 421 LYS HZ1 H N N 422 LYS HZ2 H N N 423 LYS HZ3 H N N 424 LYS HXT H N N 425 MET N N N N 426 MET CA C N S 427 MET C C N N 428 MET O O N N 429 MET CB C N N 430 MET CG C N N 431 MET SD S N N 432 MET CE C N N 433 MET OXT O N N 434 MET H H N N 435 MET H2 H N N 436 MET HA H N N 437 MET HB2 H N N 438 MET HB3 H N N 439 MET HG2 H N N 440 MET HG3 H N N 441 MET HE1 H N N 442 MET HE2 H N N 443 MET HE3 H N N 444 MET HXT H N N 445 PHE N N N N 446 PHE CA C N S 447 PHE C C N N 448 PHE O O N N 449 PHE CB C N N 450 PHE CG C Y N 451 PHE CD1 C Y N 452 PHE CD2 C Y N 453 PHE CE1 C Y N 454 PHE CE2 C Y N 455 PHE CZ C Y N 456 PHE OXT O N N 457 PHE H H N N 458 PHE H2 H N N 459 PHE HA H N N 460 PHE HB2 H N N 461 PHE HB3 H N N 462 PHE HD1 H N N 463 PHE HD2 H N N 464 PHE HE1 H N N 465 PHE HE2 H N N 466 PHE HZ H N N 467 PHE HXT H N N 468 PRO N N N N 469 PRO CA C N S 470 PRO C C N N 471 PRO O O N N 472 PRO CB C N N 473 PRO CG C N N 474 PRO CD C N N 475 PRO OXT O N N 476 PRO H H N N 477 PRO HA H N N 478 PRO HB2 H N N 479 PRO HB3 H N N 480 PRO HG2 H N N 481 PRO HG3 H N N 482 PRO HD2 H N N 483 PRO HD3 H N N 484 PRO HXT H N N 485 RPA "C1'" C N S 486 RPA "C2'" C N R 487 RPA "C3'" C N S 488 RPA "C4'" C N S 489 RPA "C5'" C N R 490 RPA "C6'" C N N 491 RPA "O1'" O N N 492 RPA "O2'" O N N 493 RPA "O3'" O N N 494 RPA "O4'" O N N 495 RPA "O5'" O N N 496 RPA "O6'" O N N 497 RPA C1 C N N 498 RPA CM1 C N N 499 RPA CM2 C N N 500 RPA C2 C N N 501 RPA C3 C N N 502 RPA C4 C N N 503 RPA C5 C N N 504 RPA CM3 C N N 505 RPA C6 C N N 506 RPA C7 C N N 507 RPA C8 C N N 508 RPA C9 C N N 509 RPA CM4 C N N 510 RPA C10 C N N 511 RPA C11 C N N 512 RPA C12 C N N 513 RPA C13 C N N 514 RPA CM5 C N N 515 RPA C14 C N N 516 RPA C15 C N N 517 RPA C16 C N N 518 RPA C17 C N N 519 RPA C18 C N N 520 RPA CM6 C N N 521 RPA C19 C N N 522 RPA C20 C N N 523 RPA C21 C N N 524 RPA C22 C N N 525 RPA CM7 C N N 526 RPA C23 C N N 527 RPA C24 C N N 528 RPA C25 C N N 529 RPA C26 C N N 530 RPA CM8 C N N 531 RPA C27 C N N 532 RPA C28 C N N 533 RPA C29 C N N 534 RPA C30 C N N 535 RPA CM9 C N N 536 RPA CM0 C N N 537 RPA O11 O N N 538 RPA "H1'" H N N 539 RPA "H2'" H N N 540 RPA "H3'" H N N 541 RPA "H4'" H N N 542 RPA "H5'" H N N 543 RPA "H6'1" H N N 544 RPA "H6'2" H N N 545 RPA "HO2'" H N N 546 RPA "HO3'" H N N 547 RPA "HO4'" H N N 548 RPA "HO6'" H N N 549 RPA HM11 H N N 550 RPA HM12 H N N 551 RPA HM13 H N N 552 RPA HM21 H N N 553 RPA HM22 H N N 554 RPA HM23 H N N 555 RPA H21A H N N 556 RPA H22 H N N 557 RPA H31 H N N 558 RPA H32 H N N 559 RPA H41 H N N 560 RPA H42 H N N 561 RPA HM31 H N N 562 RPA HM32 H N N 563 RPA HM33 H N N 564 RPA H6 H N N 565 RPA H7 H N N 566 RPA H8 H N N 567 RPA HM41 H N N 568 RPA HM42 H N N 569 RPA HM43 H N N 570 RPA H10 H N N 571 RPA H11 H N N 572 RPA H12 H N N 573 RPA HM51 H N N 574 RPA HM52 H N N 575 RPA HM53 H N N 576 RPA H14 H N N 577 RPA H15 H N N 578 RPA H16 H N N 579 RPA H17 H N N 580 RPA HM62 H N N 581 RPA HM63 H N N 582 RPA H19 H N N 583 RPA H20 H N N 584 RPA H21 H N N 585 RPA HM71 H N N 586 RPA HM72 H N N 587 RPA HM73 H N N 588 RPA H23 H N N 589 RPA H24 H N N 590 RPA H25 H N N 591 RPA HM81 H N N 592 RPA HM82 H N N 593 RPA HM83 H N N 594 RPA H27 H N N 595 RPA H28 H N N 596 RPA H29 H N N 597 RPA HM91 H N N 598 RPA HM92 H N N 599 RPA HM93 H N N 600 RPA HM01 H N N 601 RPA HM02 H N N 602 RPA HM03 H N N 603 RPA HM61 H N N 604 SER N N N N 605 SER CA C N S 606 SER C C N N 607 SER O O N N 608 SER CB C N N 609 SER OG O N N 610 SER OXT O N N 611 SER H H N N 612 SER H2 H N N 613 SER HA H N N 614 SER HB2 H N N 615 SER HB3 H N N 616 SER HG H N N 617 SER HXT H N N 618 THR N N N N 619 THR CA C N S 620 THR C C N N 621 THR O O N N 622 THR CB C N R 623 THR OG1 O N N 624 THR CG2 C N N 625 THR OXT O N N 626 THR H H N N 627 THR H2 H N N 628 THR HA H N N 629 THR HB H N N 630 THR HG1 H N N 631 THR HG21 H N N 632 THR HG22 H N N 633 THR HG23 H N N 634 THR HXT H N N 635 TRP N N N N 636 TRP CA C N S 637 TRP C C N N 638 TRP O O N N 639 TRP CB C N N 640 TRP CG C Y N 641 TRP CD1 C Y N 642 TRP CD2 C Y N 643 TRP NE1 N Y N 644 TRP CE2 C Y N 645 TRP CE3 C Y N 646 TRP CZ2 C Y N 647 TRP CZ3 C Y N 648 TRP CH2 C Y N 649 TRP OXT O N N 650 TRP H H N N 651 TRP H2 H N N 652 TRP HA H N N 653 TRP HB2 H N N 654 TRP HB3 H N N 655 TRP HD1 H N N 656 TRP HE1 H N N 657 TRP HE3 H N N 658 TRP HZ2 H N N 659 TRP HZ3 H N N 660 TRP HH2 H N N 661 TRP HXT H N N 662 TYR N N N N 663 TYR CA C N S 664 TYR C C N N 665 TYR O O N N 666 TYR CB C N N 667 TYR CG C Y N 668 TYR CD1 C Y N 669 TYR CD2 C Y N 670 TYR CE1 C Y N 671 TYR CE2 C Y N 672 TYR CZ C Y N 673 TYR OH O N N 674 TYR OXT O N N 675 TYR H H N N 676 TYR H2 H N N 677 TYR HA H N N 678 TYR HB2 H N N 679 TYR HB3 H N N 680 TYR HD1 H N N 681 TYR HD2 H N N 682 TYR HE1 H N N 683 TYR HE2 H N N 684 TYR HH H N N 685 TYR HXT H N N 686 VAL N N N N 687 VAL CA C N S 688 VAL C C N N 689 VAL O O N N 690 VAL CB C N N 691 VAL CG1 C N N 692 VAL CG2 C N N 693 VAL OXT O N N 694 VAL H H N N 695 VAL H2 H N N 696 VAL HA H N N 697 VAL HB H N N 698 VAL HG11 H N N 699 VAL HG12 H N N 700 VAL HG13 H N N 701 VAL HG21 H N N 702 VAL HG22 H N N 703 VAL HG23 H N N 704 VAL HXT H N N 705 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BCL MG NA sing N N 70 BCL MG NB sing N N 71 BCL MG NC sing N N 72 BCL MG ND sing N N 73 BCL CHA C1A sing N N 74 BCL CHA C4D doub N N 75 BCL CHA CBD sing N N 76 BCL CHB C4A doub N N 77 BCL CHB C1B sing N N 78 BCL CHB HHB sing N N 79 BCL CHC C4B sing N N 80 BCL CHC C1C doub N N 81 BCL CHC HHC sing N N 82 BCL CHD C4C sing N N 83 BCL CHD C1D doub N N 84 BCL CHD HHD sing N N 85 BCL NA C1A doub N N 86 BCL NA C4A sing N N 87 BCL C1A C2A sing N N 88 BCL C2A C3A sing N N 89 BCL C2A CAA sing N N 90 BCL C2A H2A sing N N 91 BCL C3A C4A sing N N 92 BCL C3A CMA sing N N 93 BCL C3A H3A sing N N 94 BCL CMA HMA1 sing N N 95 BCL CMA HMA2 sing N N 96 BCL CMA HMA3 sing N N 97 BCL CAA CBA sing N N 98 BCL CAA HAA1 sing N N 99 BCL CAA HAA2 sing N N 100 BCL CBA CGA sing N N 101 BCL CBA HBA1 sing N N 102 BCL CBA HBA2 sing N N 103 BCL CGA O1A doub N N 104 BCL CGA O2A sing N N 105 BCL O2A C1 sing N N 106 BCL NB C1B sing Y N 107 BCL NB C4B sing Y N 108 BCL C1B C2B doub Y N 109 BCL C2B C3B sing Y N 110 BCL C2B CMB sing N N 111 BCL C3B C4B doub Y N 112 BCL C3B CAB sing N N 113 BCL CMB HMB1 sing N N 114 BCL CMB HMB2 sing N N 115 BCL CMB HMB3 sing N N 116 BCL CAB OBB doub N N 117 BCL CAB CBB sing N N 118 BCL CBB HBB1 sing N N 119 BCL CBB HBB2 sing N N 120 BCL CBB HBB3 sing N N 121 BCL NC C1C sing N N 122 BCL NC C4C doub N N 123 BCL C1C C2C sing N N 124 BCL C2C C3C sing N N 125 BCL C2C CMC sing N N 126 BCL C2C H2C sing N N 127 BCL C3C C4C sing N N 128 BCL C3C CAC sing N N 129 BCL C3C H3C sing N N 130 BCL CMC HMC1 sing N N 131 BCL CMC HMC2 sing N N 132 BCL CMC HMC3 sing N N 133 BCL CAC CBC sing N N 134 BCL CAC HAC1 sing N N 135 BCL CAC HAC2 sing N N 136 BCL CBC HBC1 sing N N 137 BCL CBC HBC2 sing N N 138 BCL CBC HBC3 sing N N 139 BCL ND C1D sing N N 140 BCL ND C4D sing N N 141 BCL C1D C2D sing N N 142 BCL C2D C3D doub N N 143 BCL C2D CMD sing N N 144 BCL C3D C4D sing N N 145 BCL C3D CAD sing N N 146 BCL CMD HMD1 sing N N 147 BCL CMD HMD2 sing N N 148 BCL CMD HMD3 sing N N 149 BCL CAD OBD doub N N 150 BCL CAD CBD sing N N 151 BCL CBD CGD sing N N 152 BCL CBD HBD sing N N 153 BCL CGD O1D doub N N 154 BCL CGD O2D sing N N 155 BCL O2D CED sing N N 156 BCL CED HED1 sing N N 157 BCL CED HED2 sing N N 158 BCL CED HED3 sing N N 159 BCL C1 C2 sing N N 160 BCL C1 H11 sing N N 161 BCL C1 H12 sing N N 162 BCL C2 C3 doub N E 163 BCL C2 H2 sing N N 164 BCL C3 C4 sing N N 165 BCL C3 C5 sing N N 166 BCL C4 H41 sing N N 167 BCL C4 H42 sing N N 168 BCL C4 H43 sing N N 169 BCL C5 C6 sing N N 170 BCL C5 H51 sing N N 171 BCL C5 H52 sing N N 172 BCL C6 C7 sing N N 173 BCL C6 H61 sing N N 174 BCL C6 H62 sing N N 175 BCL C7 C8 sing N N 176 BCL C7 H71 sing N N 177 BCL C7 H72 sing N N 178 BCL C8 C9 sing N N 179 BCL C8 C10 sing N N 180 BCL C8 H8 sing N N 181 BCL C9 H91 sing N N 182 BCL C9 H92 sing N N 183 BCL C9 H93 sing N N 184 BCL C10 C11 sing N N 185 BCL C10 H101 sing N N 186 BCL C10 H102 sing N N 187 BCL C11 C12 sing N N 188 BCL C11 H111 sing N N 189 BCL C11 H112 sing N N 190 BCL C12 C13 sing N N 191 BCL C12 H121 sing N N 192 BCL C12 H122 sing N N 193 BCL C13 C14 sing N N 194 BCL C13 C15 sing N N 195 BCL C13 H13 sing N N 196 BCL C14 H141 sing N N 197 BCL C14 H142 sing N N 198 BCL C14 H143 sing N N 199 BCL C15 C16 sing N N 200 BCL C15 H151 sing N N 201 BCL C15 H152 sing N N 202 BCL C16 C17 sing N N 203 BCL C16 H161 sing N N 204 BCL C16 H162 sing N N 205 BCL C17 C18 sing N N 206 BCL C17 H171 sing N N 207 BCL C17 H172 sing N N 208 BCL C18 C19 sing N N 209 BCL C18 C20 sing N N 210 BCL C18 H18 sing N N 211 BCL C19 H191 sing N N 212 BCL C19 H192 sing N N 213 BCL C19 H193 sing N N 214 BCL C20 H201 sing N N 215 BCL C20 H202 sing N N 216 BCL C20 H203 sing N N 217 BOG C1 O1 sing N N 218 BOG C1 C2 sing N N 219 BOG C1 O5 sing N N 220 BOG C1 H1 sing N N 221 BOG O1 "C1'" sing N N 222 BOG C2 O2 sing N N 223 BOG C2 C3 sing N N 224 BOG C2 H2 sing N N 225 BOG O2 HO2 sing N N 226 BOG C3 O3 sing N N 227 BOG C3 C4 sing N N 228 BOG C3 H3 sing N N 229 BOG O3 HO3 sing N N 230 BOG C4 O4 sing N N 231 BOG C4 C5 sing N N 232 BOG C4 H4 sing N N 233 BOG O4 HO4 sing N N 234 BOG C5 O5 sing N N 235 BOG C5 C6 sing N N 236 BOG C5 H5 sing N N 237 BOG C6 O6 sing N N 238 BOG C6 H61 sing N N 239 BOG C6 H62 sing N N 240 BOG O6 HO6 sing N N 241 BOG "C1'" "C2'" sing N N 242 BOG "C1'" "H1'1" sing N N 243 BOG "C1'" "H1'2" sing N N 244 BOG "C2'" "C3'" sing N N 245 BOG "C2'" "H2'1" sing N N 246 BOG "C2'" "H2'2" sing N N 247 BOG "C3'" "C4'" sing N N 248 BOG "C3'" "H3'1" sing N N 249 BOG "C3'" "H3'2" sing N N 250 BOG "C4'" "C5'" sing N N 251 BOG "C4'" "H4'1" sing N N 252 BOG "C4'" "H4'2" sing N N 253 BOG "C5'" "C6'" sing N N 254 BOG "C5'" "H5'1" sing N N 255 BOG "C5'" "H5'2" sing N N 256 BOG "C6'" "C7'" sing N N 257 BOG "C6'" "H6'1" sing N N 258 BOG "C6'" "H6'2" sing N N 259 BOG "C7'" "C8'" sing N N 260 BOG "C7'" "H7'1" sing N N 261 BOG "C7'" "H7'2" sing N N 262 BOG "C8'" "H8'1" sing N N 263 BOG "C8'" "H8'2" sing N N 264 BOG "C8'" "H8'3" sing N N 265 FME N CN sing N N 266 FME N CA sing N N 267 FME N H sing N N 268 FME CN O1 doub N N 269 FME CN HCN sing N N 270 FME CA CB sing N N 271 FME CA C sing N N 272 FME CA HA sing N N 273 FME CB CG sing N N 274 FME CB HB2 sing N N 275 FME CB HB3 sing N N 276 FME CG SD sing N N 277 FME CG HG2 sing N N 278 FME CG HG3 sing N N 279 FME SD CE sing N N 280 FME CE HE1 sing N N 281 FME CE HE2 sing N N 282 FME CE HE3 sing N N 283 FME C O doub N N 284 FME C OXT sing N N 285 FME OXT HXT sing N N 286 GLN N CA sing N N 287 GLN N H sing N N 288 GLN N H2 sing N N 289 GLN CA C sing N N 290 GLN CA CB sing N N 291 GLN CA HA sing N N 292 GLN C O doub N N 293 GLN C OXT sing N N 294 GLN CB CG sing N N 295 GLN CB HB2 sing N N 296 GLN CB HB3 sing N N 297 GLN CG CD sing N N 298 GLN CG HG2 sing N N 299 GLN CG HG3 sing N N 300 GLN CD OE1 doub N N 301 GLN CD NE2 sing N N 302 GLN NE2 HE21 sing N N 303 GLN NE2 HE22 sing N N 304 GLN OXT HXT sing N N 305 GLU N CA sing N N 306 GLU N H sing N N 307 GLU N H2 sing N N 308 GLU CA C sing N N 309 GLU CA CB sing N N 310 GLU CA HA sing N N 311 GLU C O doub N N 312 GLU C OXT sing N N 313 GLU CB CG sing N N 314 GLU CB HB2 sing N N 315 GLU CB HB3 sing N N 316 GLU CG CD sing N N 317 GLU CG HG2 sing N N 318 GLU CG HG3 sing N N 319 GLU CD OE1 doub N N 320 GLU CD OE2 sing N N 321 GLU OE2 HE2 sing N N 322 GLU OXT HXT sing N N 323 GLY N CA sing N N 324 GLY N H sing N N 325 GLY N H2 sing N N 326 GLY CA C sing N N 327 GLY CA HA2 sing N N 328 GLY CA HA3 sing N N 329 GLY C O doub N N 330 GLY C OXT sing N N 331 GLY OXT HXT sing N N 332 HIS N CA sing N N 333 HIS N H sing N N 334 HIS N H2 sing N N 335 HIS CA C sing N N 336 HIS CA CB sing N N 337 HIS CA HA sing N N 338 HIS C O doub N N 339 HIS C OXT sing N N 340 HIS CB CG sing N N 341 HIS CB HB2 sing N N 342 HIS CB HB3 sing N N 343 HIS CG ND1 sing Y N 344 HIS CG CD2 doub Y N 345 HIS ND1 CE1 doub Y N 346 HIS ND1 HD1 sing N N 347 HIS CD2 NE2 sing Y N 348 HIS CD2 HD2 sing N N 349 HIS CE1 NE2 sing Y N 350 HIS CE1 HE1 sing N N 351 HIS NE2 HE2 sing N N 352 HIS OXT HXT sing N N 353 HOH O H1 sing N N 354 HOH O H2 sing N N 355 ILE N CA sing N N 356 ILE N H sing N N 357 ILE N H2 sing N N 358 ILE CA C sing N N 359 ILE CA CB sing N N 360 ILE CA HA sing N N 361 ILE C O doub N N 362 ILE C OXT sing N N 363 ILE CB CG1 sing N N 364 ILE CB CG2 sing N N 365 ILE CB HB sing N N 366 ILE CG1 CD1 sing N N 367 ILE CG1 HG12 sing N N 368 ILE CG1 HG13 sing N N 369 ILE CG2 HG21 sing N N 370 ILE CG2 HG22 sing N N 371 ILE CG2 HG23 sing N N 372 ILE CD1 HD11 sing N N 373 ILE CD1 HD12 sing N N 374 ILE CD1 HD13 sing N N 375 ILE OXT HXT sing N N 376 LEU N CA sing N N 377 LEU N H sing N N 378 LEU N H2 sing N N 379 LEU CA C sing N N 380 LEU CA CB sing N N 381 LEU CA HA sing N N 382 LEU C O doub N N 383 LEU C OXT sing N N 384 LEU CB CG sing N N 385 LEU CB HB2 sing N N 386 LEU CB HB3 sing N N 387 LEU CG CD1 sing N N 388 LEU CG CD2 sing N N 389 LEU CG HG sing N N 390 LEU CD1 HD11 sing N N 391 LEU CD1 HD12 sing N N 392 LEU CD1 HD13 sing N N 393 LEU CD2 HD21 sing N N 394 LEU CD2 HD22 sing N N 395 LEU CD2 HD23 sing N N 396 LEU OXT HXT sing N N 397 LYS N CA sing N N 398 LYS N H sing N N 399 LYS N H2 sing N N 400 LYS CA C sing N N 401 LYS CA CB sing N N 402 LYS CA HA sing N N 403 LYS C O doub N N 404 LYS C OXT sing N N 405 LYS CB CG sing N N 406 LYS CB HB2 sing N N 407 LYS CB HB3 sing N N 408 LYS CG CD sing N N 409 LYS CG HG2 sing N N 410 LYS CG HG3 sing N N 411 LYS CD CE sing N N 412 LYS CD HD2 sing N N 413 LYS CD HD3 sing N N 414 LYS CE NZ sing N N 415 LYS CE HE2 sing N N 416 LYS CE HE3 sing N N 417 LYS NZ HZ1 sing N N 418 LYS NZ HZ2 sing N N 419 LYS NZ HZ3 sing N N 420 LYS OXT HXT sing N N 421 MET N CA sing N N 422 MET N H sing N N 423 MET N H2 sing N N 424 MET CA C sing N N 425 MET CA CB sing N N 426 MET CA HA sing N N 427 MET C O doub N N 428 MET C OXT sing N N 429 MET CB CG sing N N 430 MET CB HB2 sing N N 431 MET CB HB3 sing N N 432 MET CG SD sing N N 433 MET CG HG2 sing N N 434 MET CG HG3 sing N N 435 MET SD CE sing N N 436 MET CE HE1 sing N N 437 MET CE HE2 sing N N 438 MET CE HE3 sing N N 439 MET OXT HXT sing N N 440 PHE N CA sing N N 441 PHE N H sing N N 442 PHE N H2 sing N N 443 PHE CA C sing N N 444 PHE CA CB sing N N 445 PHE CA HA sing N N 446 PHE C O doub N N 447 PHE C OXT sing N N 448 PHE CB CG sing N N 449 PHE CB HB2 sing N N 450 PHE CB HB3 sing N N 451 PHE CG CD1 doub Y N 452 PHE CG CD2 sing Y N 453 PHE CD1 CE1 sing Y N 454 PHE CD1 HD1 sing N N 455 PHE CD2 CE2 doub Y N 456 PHE CD2 HD2 sing N N 457 PHE CE1 CZ doub Y N 458 PHE CE1 HE1 sing N N 459 PHE CE2 CZ sing Y N 460 PHE CE2 HE2 sing N N 461 PHE CZ HZ sing N N 462 PHE OXT HXT sing N N 463 PRO N CA sing N N 464 PRO N CD sing N N 465 PRO N H sing N N 466 PRO CA C sing N N 467 PRO CA CB sing N N 468 PRO CA HA sing N N 469 PRO C O doub N N 470 PRO C OXT sing N N 471 PRO CB CG sing N N 472 PRO CB HB2 sing N N 473 PRO CB HB3 sing N N 474 PRO CG CD sing N N 475 PRO CG HG2 sing N N 476 PRO CG HG3 sing N N 477 PRO CD HD2 sing N N 478 PRO CD HD3 sing N N 479 PRO OXT HXT sing N N 480 RPA "C1'" "C2'" sing N N 481 RPA "C1'" "O1'" sing N N 482 RPA "C1'" "O5'" sing N N 483 RPA "C1'" "H1'" sing N N 484 RPA "C2'" "C3'" sing N N 485 RPA "C2'" "O2'" sing N N 486 RPA "C2'" "H2'" sing N N 487 RPA "C3'" "C4'" sing N N 488 RPA "C3'" "O3'" sing N N 489 RPA "C3'" "H3'" sing N N 490 RPA "C4'" "C5'" sing N N 491 RPA "C4'" "O4'" sing N N 492 RPA "C4'" "H4'" sing N N 493 RPA "C5'" "C6'" sing N N 494 RPA "C5'" "O5'" sing N N 495 RPA "C5'" "H5'" sing N N 496 RPA "C6'" "O6'" sing N N 497 RPA "C6'" "H6'1" sing N N 498 RPA "C6'" "H6'2" sing N N 499 RPA "O1'" C1 sing N N 500 RPA "O2'" "HO2'" sing N N 501 RPA "O3'" "HO3'" sing N N 502 RPA "O4'" "HO4'" sing N N 503 RPA "O6'" "HO6'" sing N N 504 RPA C1 CM1 sing N N 505 RPA C1 CM2 sing N N 506 RPA C1 C2 sing N N 507 RPA CM1 HM11 sing N N 508 RPA CM1 HM12 sing N N 509 RPA CM1 HM13 sing N N 510 RPA CM2 HM21 sing N N 511 RPA CM2 HM22 sing N N 512 RPA CM2 HM23 sing N N 513 RPA C2 C3 sing N N 514 RPA C2 H21A sing N N 515 RPA C2 H22 sing N N 516 RPA C3 C4 sing N N 517 RPA C3 H31 sing N N 518 RPA C3 H32 sing N N 519 RPA C4 C5 sing N N 520 RPA C4 H41 sing N N 521 RPA C4 H42 sing N N 522 RPA C5 CM3 sing N N 523 RPA C5 C6 doub N E 524 RPA CM3 HM31 sing N N 525 RPA CM3 HM32 sing N N 526 RPA CM3 HM33 sing N N 527 RPA C6 C7 sing N N 528 RPA C6 H6 sing N N 529 RPA C7 C8 doub N E 530 RPA C7 H7 sing N N 531 RPA C8 C9 sing N N 532 RPA C8 H8 sing N N 533 RPA C9 CM4 sing N N 534 RPA C9 C10 doub N E 535 RPA CM4 HM41 sing N N 536 RPA CM4 HM42 sing N N 537 RPA CM4 HM43 sing N N 538 RPA C10 C11 sing N N 539 RPA C10 H10 sing N N 540 RPA C11 C12 doub N E 541 RPA C11 H11 sing N N 542 RPA C12 C13 sing N N 543 RPA C12 H12 sing N N 544 RPA C13 CM5 sing N N 545 RPA C13 C14 doub N E 546 RPA CM5 HM51 sing N N 547 RPA CM5 HM52 sing N N 548 RPA CM5 HM53 sing N N 549 RPA C14 C15 sing N N 550 RPA C14 H14 sing N N 551 RPA C15 C16 doub N E 552 RPA C15 H15 sing N N 553 RPA C16 C17 sing N N 554 RPA C16 H16 sing N N 555 RPA C17 C18 doub N Z 556 RPA C17 H17 sing N N 557 RPA C18 CM6 sing N N 558 RPA C18 C19 sing N N 559 RPA CM6 O11 sing N N 560 RPA CM6 HM62 sing N N 561 RPA CM6 HM63 sing N N 562 RPA C19 C20 doub N E 563 RPA C19 H19 sing N N 564 RPA C20 C21 sing N N 565 RPA C20 H20 sing N N 566 RPA C21 C22 doub N E 567 RPA C21 H21 sing N N 568 RPA C22 CM7 sing N N 569 RPA C22 C23 sing N N 570 RPA CM7 HM71 sing N N 571 RPA CM7 HM72 sing N N 572 RPA CM7 HM73 sing N N 573 RPA C23 C24 doub N E 574 RPA C23 H23 sing N N 575 RPA C24 C25 sing N N 576 RPA C24 H24 sing N N 577 RPA C25 C26 doub N E 578 RPA C25 H25 sing N N 579 RPA C26 CM8 sing N N 580 RPA C26 C27 sing N N 581 RPA CM8 HM81 sing N N 582 RPA CM8 HM82 sing N N 583 RPA CM8 HM83 sing N N 584 RPA C27 C28 doub N E 585 RPA C27 H27 sing N N 586 RPA C28 C29 sing N N 587 RPA C28 H28 sing N N 588 RPA C29 C30 doub N N 589 RPA C29 H29 sing N N 590 RPA C30 CM9 sing N N 591 RPA C30 CM0 sing N N 592 RPA CM9 HM91 sing N N 593 RPA CM9 HM92 sing N N 594 RPA CM9 HM93 sing N N 595 RPA CM0 HM01 sing N N 596 RPA CM0 HM02 sing N N 597 RPA CM0 HM03 sing N N 598 RPA O11 HM61 sing N N 599 SER N CA sing N N 600 SER N H sing N N 601 SER N H2 sing N N 602 SER CA C sing N N 603 SER CA CB sing N N 604 SER CA HA sing N N 605 SER C O doub N N 606 SER C OXT sing N N 607 SER CB OG sing N N 608 SER CB HB2 sing N N 609 SER CB HB3 sing N N 610 SER OG HG sing N N 611 SER OXT HXT sing N N 612 THR N CA sing N N 613 THR N H sing N N 614 THR N H2 sing N N 615 THR CA C sing N N 616 THR CA CB sing N N 617 THR CA HA sing N N 618 THR C O doub N N 619 THR C OXT sing N N 620 THR CB OG1 sing N N 621 THR CB CG2 sing N N 622 THR CB HB sing N N 623 THR OG1 HG1 sing N N 624 THR CG2 HG21 sing N N 625 THR CG2 HG22 sing N N 626 THR CG2 HG23 sing N N 627 THR OXT HXT sing N N 628 TRP N CA sing N N 629 TRP N H sing N N 630 TRP N H2 sing N N 631 TRP CA C sing N N 632 TRP CA CB sing N N 633 TRP CA HA sing N N 634 TRP C O doub N N 635 TRP C OXT sing N N 636 TRP CB CG sing N N 637 TRP CB HB2 sing N N 638 TRP CB HB3 sing N N 639 TRP CG CD1 doub Y N 640 TRP CG CD2 sing Y N 641 TRP CD1 NE1 sing Y N 642 TRP CD1 HD1 sing N N 643 TRP CD2 CE2 doub Y N 644 TRP CD2 CE3 sing Y N 645 TRP NE1 CE2 sing Y N 646 TRP NE1 HE1 sing N N 647 TRP CE2 CZ2 sing Y N 648 TRP CE3 CZ3 doub Y N 649 TRP CE3 HE3 sing N N 650 TRP CZ2 CH2 doub Y N 651 TRP CZ2 HZ2 sing N N 652 TRP CZ3 CH2 sing Y N 653 TRP CZ3 HZ3 sing N N 654 TRP CH2 HH2 sing N N 655 TRP OXT HXT sing N N 656 TYR N CA sing N N 657 TYR N H sing N N 658 TYR N H2 sing N N 659 TYR CA C sing N N 660 TYR CA CB sing N N 661 TYR CA HA sing N N 662 TYR C O doub N N 663 TYR C OXT sing N N 664 TYR CB CG sing N N 665 TYR CB HB2 sing N N 666 TYR CB HB3 sing N N 667 TYR CG CD1 doub Y N 668 TYR CG CD2 sing Y N 669 TYR CD1 CE1 sing Y N 670 TYR CD1 HD1 sing N N 671 TYR CD2 CE2 doub Y N 672 TYR CD2 HD2 sing N N 673 TYR CE1 CZ doub Y N 674 TYR CE1 HE1 sing N N 675 TYR CE2 CZ sing Y N 676 TYR CE2 HE2 sing N N 677 TYR CZ OH sing N N 678 TYR OH HH sing N N 679 TYR OXT HXT sing N N 680 VAL N CA sing N N 681 VAL N H sing N N 682 VAL N H2 sing N N 683 VAL CA C sing N N 684 VAL CA CB sing N N 685 VAL CA HA sing N N 686 VAL C O doub N N 687 VAL C OXT sing N N 688 VAL CB CG1 sing N N 689 VAL CB CG2 sing N N 690 VAL CB HB sing N N 691 VAL CG1 HG11 sing N N 692 VAL CG1 HG12 sing N N 693 VAL CG1 HG13 sing N N 694 VAL CG2 HG21 sing N N 695 VAL CG2 HG22 sing N N 696 VAL CG2 HG23 sing N N 697 VAL OXT HXT sing N N 698 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KZU _pdbx_initial_refinement_model.details '1KZU (LH2 complex from Rps. acidophila strain 10050)' # _atom_sites.entry_id 1IJD _atom_sites.fract_transf_matrix[1][1] 0.008528 _atom_sites.fract_transf_matrix[1][2] 0.004923 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009847 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003379 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_