HEADER TRANSLATION 26-APR-01 1IJF TITLE NUCLEOTIDE EXCHANGE MECHANISMS IN THE EEF1A-EEF1BA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGATION FACTOR 1-ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EEF1A; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ELONGATION FACTOR 1-BETA; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: CATALYTICAL C-TERMINAL FRAGMENT; COMPND 9 SYNONYM: EEF1BA; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 7 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 8 ORGANISM_TAXID: 4932; SOURCE 9 GENE: TEF5; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: 834 DE3; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PET11D KEYWDS PROTEIN COMPLEX, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR G.R.ANDERSEN,L.VALENTE,L.PEDERSEN,T.G.KINZY,J.NYBORG REVDAT 4 16-AUG-23 1IJF 1 REMARK LINK REVDAT 3 24-FEB-09 1IJF 1 VERSN REVDAT 2 06-JUN-01 1IJF 1 JRNL REVDAT 1 09-MAY-01 1IJF 0 JRNL AUTH G.R.ANDERSEN,L.VALENTE,L.PEDERSEN,T.G.KINZY,J.NYBORG JRNL TITL CRYSTAL STRUCTURES OF NUCLEOTIDE EXCHANGE INTERMEDIATES IN JRNL TITL 2 THE EEF1A-EEF1BALPHA COMPLEX. JRNL REF NAT.STRUCT.BIOL. V. 8 531 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11373622 JRNL DOI 10.1038/88598 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.R.ANDERSEN,L.PEDERSEN,L.VALENTE,I.I.CHATTERJEE,T.G.KINZY, REMARK 1 AUTH 2 M.KJELDGAARD,J.NYBORG REMARK 1 TITL STRUCTURAL BASIS FOR NUCLEOTIDE EXCHANGE AND COMPETITION REMARK 1 TITL 2 WITH TRNA IN THE YEAST ELONGATION FACTOR COMPLEX REMARK 1 TITL 3 EEF1A:EEF1BALPHA REMARK 1 REF MOL.CELL V. 6 1261 2000 REMARK 1 REFN ISSN 1097-2765 REMARK 1 DOI 10.1016/S1097-2765(00)00122-2 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH AND HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 13.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 133306.040 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 10866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 573 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1457 REMARK 3 BIN R VALUE (WORKING SET) : 0.3350 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 87 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.042 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4091 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 14.06000 REMARK 3 B22 (A**2) : -1.98000 REMARK 3 B33 (A**2) : -12.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM SIGMAA (A) : 0.44 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.56 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.010 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.360 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.020 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.020 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.960 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 10.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : 5GP_PAR500 REMARK 3 PARAMETER FILE 4 : MG135.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : 5GP_TOP REMARK 3 TOPOLOGY FILE 4 : MG_XPLOR_TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-APR-01. REMARK 100 THE DEPOSITION ID IS D_1000013331. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10905 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 14.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.17200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1F60 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MME2K, TRIS, HEPES, KCL, DTT, PH 8.2, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.12350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.35650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.86400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.35650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.12350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.86400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 442 REMARK 465 GLU A 443 REMARK 465 LYS A 444 REMARK 465 ALA A 445 REMARK 465 ALA A 446 REMARK 465 LYS A 447 REMARK 465 VAL A 448 REMARK 465 THR A 449 REMARK 465 LYS A 450 REMARK 465 ALA A 451 REMARK 465 ALA A 452 REMARK 465 GLN A 453 REMARK 465 LYS A 454 REMARK 465 ALA A 455 REMARK 465 ALA A 456 REMARK 465 LYS A 457 REMARK 465 LYS A 458 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 279 CA - C - O ANGL. DEV. = -18.8 DEGREES REMARK 500 PRO A 280 CA - N - CD ANGL. DEV. = -11.2 DEGREES REMARK 500 PRO A 280 N - CA - CB ANGL. DEV. = 10.1 DEGREES REMARK 500 PRO A 280 N - CD - CG ANGL. DEV. = 9.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 199 -64.42 -90.37 REMARK 500 PRO A 239 37.03 -74.15 REMARK 500 HIS A 293 -122.09 55.33 REMARK 500 ASN A 329 87.92 -166.53 REMARK 500 HIS A 362 -122.02 44.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 279 PRO A 280 56.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ALA A 279 22.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GDP A 507 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 507 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1F60 RELATED DB: PDB REMARK 900 1F60 IS YEAST ELONGATION FACTOR COMPLEX EEF1A: EEF1BA, NUCLEOTIDE REMARK 900 FREE COMPLEX REMARK 900 RELATED ID: 1G7C RELATED DB: PDB REMARK 900 1G7C IS YEAST EEF1A: EEF1BA IN COMPLEX WITH GDPNP REMARK 900 RELATED ID: 1IJE RELATED DB: PDB REMARK 900 1IJE IS YEAST EEF1A: EEF1BA IN COMPLEX WITH GDP DBREF 1IJF A 1 458 UNP P02994 EF1A_YEAST 1 458 DBREF 1IJF B 1117 1206 UNP P32471 EF1B_YEAST 117 206 SEQRES 1 A 458 MET GLY LYS GLU LYS SER HIS ILE ASN VAL VAL VAL ILE SEQRES 2 A 458 GLY HIS VAL ASP SER GLY LYS SER THR THR THR GLY HIS SEQRES 3 A 458 LEU ILE TYR LYS CYS GLY GLY ILE ASP LYS ARG THR ILE SEQRES 4 A 458 GLU LYS PHE GLU LYS GLU ALA ALA GLU LEU GLY LYS GLY SEQRES 5 A 458 SER PHE LYS TYR ALA TRP VAL LEU ASP LYS LEU LYS ALA SEQRES 6 A 458 GLU ARG GLU ARG GLY ILE THR ILE ASP ILE ALA LEU TRP SEQRES 7 A 458 LYS PHE GLU THR PRO LYS TYR GLN VAL THR VAL ILE ASP SEQRES 8 A 458 ALA PRO GLY HIS ARG ASP PHE ILE LYS ASN MET ILE THR SEQRES 9 A 458 GLY THR SER GLN ALA ASP CYS ALA ILE LEU ILE ILE ALA SEQRES 10 A 458 GLY GLY VAL GLY GLU PHE GLU ALA GLY ILE SER LYS ASP SEQRES 11 A 458 GLY GLN THR ARG GLU HIS ALA LEU LEU ALA PHE THR LEU SEQRES 12 A 458 GLY VAL ARG GLN LEU ILE VAL ALA VAL ASN LYS MET ASP SEQRES 13 A 458 SER VAL LYS TRP ASP GLU SER ARG PHE GLN GLU ILE VAL SEQRES 14 A 458 LYS GLU THR SER ASN PHE ILE LYS LYS VAL GLY TYR ASN SEQRES 15 A 458 PRO LYS THR VAL PRO PHE VAL PRO ILE SER GLY TRP ASN SEQRES 16 A 458 GLY ASP ASN MET ILE GLU ALA THR THR ASN ALA PRO TRP SEQRES 17 A 458 TYR LYS GLY TRP GLU LYS GLU THR LYS ALA GLY VAL VAL SEQRES 18 A 458 LYS GLY LYS THR LEU LEU GLU ALA ILE ASP ALA ILE GLU SEQRES 19 A 458 GLN PRO SER ARG PRO THR ASP LYS PRO LEU ARG LEU PRO SEQRES 20 A 458 LEU GLN ASP VAL TYR LYS ILE GLY GLY ILE GLY THR VAL SEQRES 21 A 458 PRO VAL GLY ARG VAL GLU THR GLY VAL ILE LYS PRO GLY SEQRES 22 A 458 MET VAL VAL THR PHE ALA PRO ALA GLY VAL THR THR GLU SEQRES 23 A 458 VAL LYS SER VAL GLU MET HIS HIS GLU GLN LEU GLU GLN SEQRES 24 A 458 GLY VAL PRO GLY ASP ASN VAL GLY PHE ASN VAL LYS ASN SEQRES 25 A 458 VAL SER VAL LYS GLU ILE ARG ARG GLY ASN VAL CYS GLY SEQRES 26 A 458 ASP ALA LYS ASN ASP PRO PRO LYS GLY CYS ALA SER PHE SEQRES 27 A 458 ASN ALA THR VAL ILE VAL LEU ASN HIS PRO GLY GLN ILE SEQRES 28 A 458 SER ALA GLY TYR SER PRO VAL LEU ASP CYS HIS THR ALA SEQRES 29 A 458 HIS ILE ALA CYS ARG PHE ASP GLU LEU LEU GLU LYS ASN SEQRES 30 A 458 ASP ARG ARG SER GLY LYS LYS LEU GLU ASP HIS PRO LYS SEQRES 31 A 458 PHE LEU LYS SER GLY ASP ALA ALA LEU VAL LYS PHE VAL SEQRES 32 A 458 PRO SER LYS PRO MET CYS VAL GLU ALA PHE SER GLU TYR SEQRES 33 A 458 PRO PRO LEU GLY ARG PHE ALA VAL ARG ASP MET ARG GLN SEQRES 34 A 458 THR VAL ALA VAL GLY VAL ILE LYS SER VAL ASP LYS THR SEQRES 35 A 458 GLU LYS ALA ALA LYS VAL THR LYS ALA ALA GLN LYS ALA SEQRES 36 A 458 ALA LYS LYS SEQRES 1 B 90 PRO ALA ALA LYS SER ILE VAL THR LEU ASP VAL LYS PRO SEQRES 2 B 90 TRP ASP ASP GLU THR ASN LEU GLU GLU MET VAL ALA ASN SEQRES 3 B 90 VAL LYS ALA ILE GLU MET GLU GLY LEU THR TRP GLY ALA SEQRES 4 B 90 HIS GLN PHE ILE PRO ILE GLY PHE GLY ILE LYS LYS LEU SEQRES 5 B 90 GLN ILE ASN CYS VAL VAL GLU ASP ASP LYS VAL SER LEU SEQRES 6 B 90 ASP ASP LEU GLN GLN SER ILE GLU GLU ASP GLU ASP HIS SEQRES 7 B 90 VAL GLN SER THR ASP ILE ALA ALA MET GLN LYS LEU HET GDP A 507 24 HET MG B 508 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 MG MG 2+ HELIX 1 1 GLY A 19 GLY A 32 1 14 HELIX 2 2 ASP A 35 ALA A 46 1 12 HELIX 3 3 ALA A 47 GLY A 50 5 4 HELIX 4 4 LYS A 55 ARG A 69 1 15 HELIX 5 5 ASP A 97 GLY A 105 1 9 HELIX 6 6 GLY A 119 ILE A 127 1 9 HELIX 7 7 GLY A 131 LEU A 143 1 13 HELIX 8 8 LYS A 154 LYS A 159 5 6 HELIX 9 9 ASP A 161 GLY A 180 1 20 HELIX 10 10 ASN A 182 VAL A 186 5 5 HELIX 11 11 THR A 225 ALA A 232 1 8 HELIX 12 12 TYR A 416 LEU A 419 5 4 HELIX 13 13 ASN B 1135 ALA B 1145 1 11 HELIX 14 14 SER B 1180 GLU B 1189 1 10 SHEET 1 A 6 PHE A 188 PRO A 190 0 SHEET 2 A 6 GLN A 147 ASN A 153 1 O VAL A 150 N VAL A 189 SHEET 3 A 6 CYS A 111 ALA A 117 1 N ALA A 112 O GLN A 147 SHEET 4 A 6 SER A 6 ILE A 13 1 O ASN A 9 N CYS A 111 SHEET 5 A 6 TYR A 85 ASP A 91 1 N GLN A 86 O SER A 6 SHEET 6 A 6 TRP A 78 GLU A 81 -1 O TRP A 78 N VAL A 89 SHEET 1 B 2 TRP A 212 GLU A 215 0 SHEET 2 B 2 VAL A 220 GLY A 223 -1 N VAL A 221 O LYS A 214 SHEET 1 C 8 GLU A 295 GLN A 296 0 SHEET 2 C 8 VAL A 283 MET A 292 -1 N MET A 292 O GLU A 295 SHEET 3 C 8 VAL A 275 ALA A 279 -1 N VAL A 276 O THR A 285 SHEET 4 C 8 VAL A 323 ASP A 326 -1 O VAL A 323 N ALA A 279 SHEET 5 C 8 ARG A 245 ILE A 254 -1 O LEU A 246 N CYS A 324 SHEET 6 C 8 GLY A 258 ARG A 264 -1 N GLY A 258 O ILE A 254 SHEET 7 C 8 ASN A 305 VAL A 310 -1 N VAL A 306 O GLY A 263 SHEET 8 C 8 VAL A 283 MET A 292 -1 N LYS A 288 O ASN A 309 SHEET 1 D 8 LYS A 384 ASP A 387 0 SHEET 2 D 8 ALA A 364 ASN A 377 -1 O LYS A 376 N LEU A 385 SHEET 3 D 8 VAL A 358 CYS A 361 -1 N LEU A 359 O ILE A 366 SHEET 4 D 8 ARG A 421 ASP A 426 -1 O ALA A 423 N ASP A 360 SHEET 5 D 8 GLN A 429 ASP A 440 -1 O GLN A 429 N ASP A 426 SHEET 6 D 8 SER A 337 VAL A 344 -1 O SER A 337 N ASP A 440 SHEET 7 D 8 ALA A 397 PRO A 404 -1 O ALA A 398 N VAL A 342 SHEET 8 D 8 ALA A 364 ASN A 377 -1 N ARG A 369 O VAL A 403 SHEET 1 E 4 VAL B1195 LYS B1205 0 SHEET 2 E 4 LYS B1120 PRO B1129 -1 N ILE B1122 O GLN B1204 SHEET 3 E 4 ILE B1165 GLU B1175 -1 O LEU B1168 N VAL B1127 SHEET 4 E 4 LEU B1151 GLY B1162 -1 O THR B1152 N VAL B1173 LINK O2A GDP A 507 MG MG B 508 1555 1555 2.18 SITE 1 AC1 2 GDP A 507 LYS B1205 SITE 1 AC2 12 VAL A 16 GLY A 19 SER A 21 THR A 22 SITE 2 AC2 12 ASN A 153 LYS A 154 ASP A 156 SER A 192 SITE 3 AC2 12 GLY A 193 TRP A 194 MG B 508 LYS B1205 CRYST1 64.247 91.728 92.713 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015565 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010902 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010786 0.00000