data_1IO2 # _entry.id 1IO2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IO2 pdb_00001io2 10.2210/pdb1io2/pdb RCSB RCSB005109 ? ? WWPDB D_1000005109 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-04-18 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IO2 _pdbx_database_status.recvd_initial_deposition_date 2000-12-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Muroya, A.' 1 'Tsuchiya, D.' 2 'Ishikawa, M.' 3 'Haruki, M.' 4 'Morikawa, M.' 5 # _citation.id primary _citation.title 'Catalytic center of an archaeal type 2 ribonuclease H as revealed by X-ray crystallographic and mutational analyses.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 10 _citation.page_first 707 _citation.page_last 714 _citation.year 2001 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11274461 _citation.pdbx_database_id_DOI 10.1110/ps.48001 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Muroya, A.' 1 ? primary 'Tsuchiya, D.' 2 ? primary 'Ishikawa, M.' 3 ? primary 'Haruki, M.' 4 ? primary 'Morikawa, M.' 5 ? primary 'Kanaya, S.' 6 ? primary 'Morikawa, K.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RIBONUCLEASE HII' 23974.449 1 3.1.26.4 ? 'RESIDUES 1-213' ? 2 water nat water 18.015 216 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKIAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDDYVILELPPDVIGSREGTL NEFEVENFAKALNSLKVKPDVIYADAADVDEERFARELGERLNFEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLK EEYGEIGSGYPSDPRTRAFLENYYREHGEFPPIVRKGWKTLKKIAEKVESEKK ; _entity_poly.pdbx_seq_one_letter_code_can ;MKIAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDDYVILELPPDVIGSREGTL NEFEVENFAKALNSLKVKPDVIYADAADVDEERFARELGERLNFEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLK EEYGEIGSGYPSDPRTRAFLENYYREHGEFPPIVRKGWKTLKKIAEKVESEKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 ILE n 1 4 ALA n 1 5 GLY n 1 6 ILE n 1 7 ASP n 1 8 GLU n 1 9 ALA n 1 10 GLY n 1 11 ARG n 1 12 GLY n 1 13 PRO n 1 14 VAL n 1 15 ILE n 1 16 GLY n 1 17 PRO n 1 18 MET n 1 19 VAL n 1 20 ILE n 1 21 ALA n 1 22 ALA n 1 23 VAL n 1 24 VAL n 1 25 VAL n 1 26 ASP n 1 27 GLU n 1 28 ASN n 1 29 SER n 1 30 LEU n 1 31 PRO n 1 32 LYS n 1 33 LEU n 1 34 GLU n 1 35 GLU n 1 36 LEU n 1 37 LYS n 1 38 VAL n 1 39 ARG n 1 40 ASP n 1 41 SER n 1 42 LYS n 1 43 LYS n 1 44 LEU n 1 45 THR n 1 46 PRO n 1 47 LYS n 1 48 ARG n 1 49 ARG n 1 50 GLU n 1 51 LYS n 1 52 LEU n 1 53 PHE n 1 54 ASN n 1 55 GLU n 1 56 ILE n 1 57 LEU n 1 58 GLY n 1 59 VAL n 1 60 LEU n 1 61 ASP n 1 62 ASP n 1 63 TYR n 1 64 VAL n 1 65 ILE n 1 66 LEU n 1 67 GLU n 1 68 LEU n 1 69 PRO n 1 70 PRO n 1 71 ASP n 1 72 VAL n 1 73 ILE n 1 74 GLY n 1 75 SER n 1 76 ARG n 1 77 GLU n 1 78 GLY n 1 79 THR n 1 80 LEU n 1 81 ASN n 1 82 GLU n 1 83 PHE n 1 84 GLU n 1 85 VAL n 1 86 GLU n 1 87 ASN n 1 88 PHE n 1 89 ALA n 1 90 LYS n 1 91 ALA n 1 92 LEU n 1 93 ASN n 1 94 SER n 1 95 LEU n 1 96 LYS n 1 97 VAL n 1 98 LYS n 1 99 PRO n 1 100 ASP n 1 101 VAL n 1 102 ILE n 1 103 TYR n 1 104 ALA n 1 105 ASP n 1 106 ALA n 1 107 ALA n 1 108 ASP n 1 109 VAL n 1 110 ASP n 1 111 GLU n 1 112 GLU n 1 113 ARG n 1 114 PHE n 1 115 ALA n 1 116 ARG n 1 117 GLU n 1 118 LEU n 1 119 GLY n 1 120 GLU n 1 121 ARG n 1 122 LEU n 1 123 ASN n 1 124 PHE n 1 125 GLU n 1 126 ALA n 1 127 GLU n 1 128 VAL n 1 129 VAL n 1 130 ALA n 1 131 LYS n 1 132 HIS n 1 133 LYS n 1 134 ALA n 1 135 ASP n 1 136 ASP n 1 137 ILE n 1 138 PHE n 1 139 PRO n 1 140 VAL n 1 141 VAL n 1 142 SER n 1 143 ALA n 1 144 ALA n 1 145 SER n 1 146 ILE n 1 147 LEU n 1 148 ALA n 1 149 LYS n 1 150 VAL n 1 151 THR n 1 152 ARG n 1 153 ASP n 1 154 ARG n 1 155 ALA n 1 156 VAL n 1 157 GLU n 1 158 LYS n 1 159 LEU n 1 160 LYS n 1 161 GLU n 1 162 GLU n 1 163 TYR n 1 164 GLY n 1 165 GLU n 1 166 ILE n 1 167 GLY n 1 168 SER n 1 169 GLY n 1 170 TYR n 1 171 PRO n 1 172 SER n 1 173 ASP n 1 174 PRO n 1 175 ARG n 1 176 THR n 1 177 ARG n 1 178 ALA n 1 179 PHE n 1 180 LEU n 1 181 GLU n 1 182 ASN n 1 183 TYR n 1 184 TYR n 1 185 ARG n 1 186 GLU n 1 187 HIS n 1 188 GLY n 1 189 GLU n 1 190 PHE n 1 191 PRO n 1 192 PRO n 1 193 ILE n 1 194 VAL n 1 195 ARG n 1 196 LYS n 1 197 GLY n 1 198 TRP n 1 199 LYS n 1 200 THR n 1 201 LEU n 1 202 LYS n 1 203 LYS n 1 204 ILE n 1 205 ALA n 1 206 GLU n 1 207 LYS n 1 208 VAL n 1 209 GLU n 1 210 SER n 1 211 GLU n 1 212 LYS n 1 213 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermococcus _entity_src_gen.pdbx_gene_src_gene RNHB _entity_src_gen.gene_src_species 'Thermococcus kodakarensis' _entity_src_gen.gene_src_strain KOD1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermococcus kodakarensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 69014 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HB101 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PJAL700K _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 TYR 103 103 103 TYR TYR A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 PHE 124 124 124 PHE PHE A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 HIS 132 132 132 HIS HIS A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 PHE 138 138 138 PHE PHE A . n A 1 139 PRO 139 139 139 PRO PRO A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 ARG 154 154 154 ARG ARG A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 TYR 163 163 163 TYR TYR A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 TYR 170 170 170 TYR TYR A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 SER 172 172 172 SER SER A . n A 1 173 ASP 173 173 173 ASP ASP A . n A 1 174 PRO 174 174 174 PRO PRO A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 PHE 179 179 179 PHE PHE A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 ASN 182 182 182 ASN ASN A . n A 1 183 TYR 183 183 183 TYR TYR A . n A 1 184 TYR 184 184 184 TYR TYR A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 HIS 187 187 187 HIS HIS A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 PHE 190 190 190 PHE PHE A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 PRO 192 192 192 PRO PRO A . n A 1 193 ILE 193 193 193 ILE ILE A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 ARG 195 195 195 ARG ARG A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 TRP 198 198 198 TRP TRP A . n A 1 199 LYS 199 199 199 LYS LYS A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 ILE 204 204 204 ILE ILE A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 GLU 209 209 209 GLU GLU A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 GLU 211 211 211 GLU GLU A . n A 1 212 LYS 212 212 212 LYS LYS A . n A 1 213 LYS 213 213 213 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 301 HOH WAT A . B 2 HOH 2 302 302 HOH WAT A . B 2 HOH 3 303 303 HOH WAT A . B 2 HOH 4 304 304 HOH WAT A . B 2 HOH 5 305 305 HOH WAT A . B 2 HOH 6 306 306 HOH WAT A . B 2 HOH 7 307 307 HOH WAT A . B 2 HOH 8 308 308 HOH WAT A . B 2 HOH 9 309 309 HOH WAT A . B 2 HOH 10 310 310 HOH WAT A . B 2 HOH 11 311 311 HOH WAT A . B 2 HOH 12 312 312 HOH WAT A . B 2 HOH 13 313 313 HOH WAT A . B 2 HOH 14 314 314 HOH WAT A . B 2 HOH 15 315 315 HOH WAT A . B 2 HOH 16 316 316 HOH WAT A . B 2 HOH 17 317 317 HOH WAT A . B 2 HOH 18 318 318 HOH WAT A . B 2 HOH 19 319 319 HOH WAT A . B 2 HOH 20 320 320 HOH WAT A . B 2 HOH 21 321 321 HOH WAT A . B 2 HOH 22 322 322 HOH WAT A . B 2 HOH 23 323 323 HOH WAT A . B 2 HOH 24 324 324 HOH WAT A . B 2 HOH 25 325 325 HOH WAT A . B 2 HOH 26 326 326 HOH WAT A . B 2 HOH 27 327 327 HOH WAT A . B 2 HOH 28 328 328 HOH WAT A . B 2 HOH 29 329 329 HOH WAT A . B 2 HOH 30 330 330 HOH WAT A . B 2 HOH 31 331 331 HOH WAT A . B 2 HOH 32 332 332 HOH WAT A . B 2 HOH 33 333 333 HOH WAT A . B 2 HOH 34 334 334 HOH WAT A . B 2 HOH 35 335 335 HOH WAT A . B 2 HOH 36 336 336 HOH WAT A . B 2 HOH 37 337 337 HOH WAT A . B 2 HOH 38 338 338 HOH WAT A . B 2 HOH 39 339 339 HOH WAT A . B 2 HOH 40 340 340 HOH WAT A . B 2 HOH 41 341 341 HOH WAT A . B 2 HOH 42 342 342 HOH WAT A . B 2 HOH 43 343 343 HOH WAT A . B 2 HOH 44 344 344 HOH WAT A . B 2 HOH 45 345 345 HOH WAT A . B 2 HOH 46 346 346 HOH WAT A . B 2 HOH 47 347 347 HOH WAT A . B 2 HOH 48 348 348 HOH WAT A . B 2 HOH 49 349 349 HOH WAT A . B 2 HOH 50 350 350 HOH WAT A . B 2 HOH 51 351 351 HOH WAT A . B 2 HOH 52 352 352 HOH WAT A . B 2 HOH 53 353 353 HOH WAT A . B 2 HOH 54 354 354 HOH WAT A . B 2 HOH 55 355 355 HOH WAT A . B 2 HOH 56 356 356 HOH WAT A . B 2 HOH 57 357 357 HOH WAT A . B 2 HOH 58 358 358 HOH WAT A . B 2 HOH 59 359 359 HOH WAT A . B 2 HOH 60 360 360 HOH WAT A . B 2 HOH 61 361 361 HOH WAT A . B 2 HOH 62 362 362 HOH WAT A . B 2 HOH 63 363 363 HOH WAT A . B 2 HOH 64 364 364 HOH WAT A . B 2 HOH 65 365 365 HOH WAT A . B 2 HOH 66 366 366 HOH WAT A . B 2 HOH 67 367 367 HOH WAT A . B 2 HOH 68 368 368 HOH WAT A . B 2 HOH 69 369 369 HOH WAT A . B 2 HOH 70 370 370 HOH WAT A . B 2 HOH 71 371 371 HOH WAT A . B 2 HOH 72 372 372 HOH WAT A . B 2 HOH 73 373 373 HOH WAT A . B 2 HOH 74 374 374 HOH WAT A . B 2 HOH 75 375 375 HOH WAT A . B 2 HOH 76 376 376 HOH WAT A . B 2 HOH 77 377 377 HOH WAT A . B 2 HOH 78 378 378 HOH WAT A . B 2 HOH 79 379 379 HOH WAT A . B 2 HOH 80 380 380 HOH WAT A . B 2 HOH 81 381 381 HOH WAT A . B 2 HOH 82 382 382 HOH WAT A . B 2 HOH 83 383 383 HOH WAT A . B 2 HOH 84 384 384 HOH WAT A . B 2 HOH 85 385 385 HOH WAT A . B 2 HOH 86 386 386 HOH WAT A . B 2 HOH 87 387 387 HOH WAT A . B 2 HOH 88 388 388 HOH WAT A . B 2 HOH 89 389 389 HOH WAT A . B 2 HOH 90 390 390 HOH WAT A . B 2 HOH 91 391 391 HOH WAT A . B 2 HOH 92 392 392 HOH WAT A . B 2 HOH 93 393 393 HOH WAT A . B 2 HOH 94 394 394 HOH WAT A . B 2 HOH 95 395 395 HOH WAT A . B 2 HOH 96 396 396 HOH WAT A . B 2 HOH 97 397 397 HOH WAT A . B 2 HOH 98 398 398 HOH WAT A . B 2 HOH 99 399 399 HOH WAT A . B 2 HOH 100 400 400 HOH WAT A . B 2 HOH 101 401 401 HOH WAT A . B 2 HOH 102 402 402 HOH WAT A . B 2 HOH 103 403 403 HOH WAT A . B 2 HOH 104 404 404 HOH WAT A . B 2 HOH 105 405 405 HOH WAT A . B 2 HOH 106 406 406 HOH WAT A . B 2 HOH 107 407 407 HOH WAT A . B 2 HOH 108 408 408 HOH WAT A . B 2 HOH 109 409 409 HOH WAT A . B 2 HOH 110 410 410 HOH WAT A . B 2 HOH 111 411 411 HOH WAT A . B 2 HOH 112 412 412 HOH WAT A . B 2 HOH 113 413 413 HOH WAT A . B 2 HOH 114 414 414 HOH WAT A . B 2 HOH 115 415 415 HOH WAT A . B 2 HOH 116 416 416 HOH WAT A . B 2 HOH 117 417 417 HOH WAT A . B 2 HOH 118 418 418 HOH WAT A . B 2 HOH 119 419 419 HOH WAT A . B 2 HOH 120 420 420 HOH WAT A . B 2 HOH 121 421 421 HOH WAT A . B 2 HOH 122 422 422 HOH WAT A . B 2 HOH 123 423 423 HOH WAT A . B 2 HOH 124 424 424 HOH WAT A . B 2 HOH 125 425 425 HOH WAT A . B 2 HOH 126 426 426 HOH WAT A . B 2 HOH 127 427 427 HOH WAT A . B 2 HOH 128 428 428 HOH WAT A . B 2 HOH 129 429 429 HOH WAT A . B 2 HOH 130 430 430 HOH WAT A . B 2 HOH 131 431 431 HOH WAT A . B 2 HOH 132 432 432 HOH WAT A . B 2 HOH 133 433 433 HOH WAT A . B 2 HOH 134 434 434 HOH WAT A . B 2 HOH 135 435 435 HOH WAT A . B 2 HOH 136 436 436 HOH WAT A . B 2 HOH 137 437 437 HOH WAT A . B 2 HOH 138 438 438 HOH WAT A . B 2 HOH 139 439 439 HOH WAT A . B 2 HOH 140 440 440 HOH WAT A . B 2 HOH 141 441 441 HOH WAT A . B 2 HOH 142 442 442 HOH WAT A . B 2 HOH 143 443 443 HOH WAT A . B 2 HOH 144 444 444 HOH WAT A . B 2 HOH 145 445 445 HOH WAT A . B 2 HOH 146 446 446 HOH WAT A . B 2 HOH 147 447 447 HOH WAT A . B 2 HOH 148 448 448 HOH WAT A . B 2 HOH 149 449 449 HOH WAT A . B 2 HOH 150 450 450 HOH WAT A . B 2 HOH 151 451 451 HOH WAT A . B 2 HOH 152 452 452 HOH WAT A . B 2 HOH 153 453 453 HOH WAT A . B 2 HOH 154 454 454 HOH WAT A . B 2 HOH 155 455 455 HOH WAT A . B 2 HOH 156 456 456 HOH WAT A . B 2 HOH 157 457 457 HOH WAT A . B 2 HOH 158 458 458 HOH WAT A . B 2 HOH 159 459 459 HOH WAT A . B 2 HOH 160 460 460 HOH WAT A . B 2 HOH 161 461 461 HOH WAT A . B 2 HOH 162 462 462 HOH WAT A . B 2 HOH 163 463 463 HOH WAT A . B 2 HOH 164 464 464 HOH WAT A . B 2 HOH 165 465 465 HOH WAT A . B 2 HOH 166 466 466 HOH WAT A . B 2 HOH 167 467 467 HOH WAT A . B 2 HOH 168 468 468 HOH WAT A . B 2 HOH 169 469 469 HOH WAT A . B 2 HOH 170 470 470 HOH WAT A . B 2 HOH 171 471 471 HOH WAT A . B 2 HOH 172 472 472 HOH WAT A . B 2 HOH 173 473 473 HOH WAT A . B 2 HOH 174 474 474 HOH WAT A . B 2 HOH 175 475 475 HOH WAT A . B 2 HOH 176 476 476 HOH WAT A . B 2 HOH 177 477 477 HOH WAT A . B 2 HOH 178 478 478 HOH WAT A . B 2 HOH 179 479 479 HOH WAT A . B 2 HOH 180 480 480 HOH WAT A . B 2 HOH 181 481 481 HOH WAT A . B 2 HOH 182 482 482 HOH WAT A . B 2 HOH 183 483 483 HOH WAT A . B 2 HOH 184 484 484 HOH WAT A . B 2 HOH 185 485 485 HOH WAT A . B 2 HOH 186 486 486 HOH WAT A . B 2 HOH 187 487 487 HOH WAT A . B 2 HOH 188 488 488 HOH WAT A . B 2 HOH 189 489 489 HOH WAT A . B 2 HOH 190 490 490 HOH WAT A . B 2 HOH 191 491 491 HOH WAT A . B 2 HOH 192 492 492 HOH WAT A . B 2 HOH 193 493 493 HOH WAT A . B 2 HOH 194 494 494 HOH WAT A . B 2 HOH 195 495 495 HOH WAT A . B 2 HOH 196 496 496 HOH WAT A . B 2 HOH 197 497 497 HOH WAT A . B 2 HOH 198 498 498 HOH WAT A . B 2 HOH 199 499 499 HOH WAT A . B 2 HOH 200 500 500 HOH WAT A . B 2 HOH 201 501 501 HOH WAT A . B 2 HOH 202 502 502 HOH WAT A . B 2 HOH 203 503 503 HOH WAT A . B 2 HOH 204 504 504 HOH WAT A . B 2 HOH 205 505 505 HOH WAT A . B 2 HOH 206 506 506 HOH WAT A . B 2 HOH 207 507 507 HOH WAT A . B 2 HOH 208 508 508 HOH WAT A . B 2 HOH 209 509 509 HOH WAT A . B 2 HOH 210 510 510 HOH WAT A . B 2 HOH 211 511 511 HOH WAT A . B 2 HOH 212 512 512 HOH WAT A . B 2 HOH 213 513 513 HOH WAT A . B 2 HOH 214 514 514 HOH WAT A . B 2 HOH 215 515 515 HOH WAT A . B 2 HOH 216 516 516 HOH WAT A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 34 ? CG ? A GLU 34 CG 2 1 Y 1 A GLU 34 ? CD ? A GLU 34 CD 3 1 Y 1 A GLU 34 ? OE1 ? A GLU 34 OE1 4 1 Y 1 A GLU 34 ? OE2 ? A GLU 34 OE2 5 1 Y 1 A LYS 37 ? CG ? A LYS 37 CG 6 1 Y 1 A LYS 37 ? CD ? A LYS 37 CD 7 1 Y 1 A LYS 37 ? CE ? A LYS 37 CE 8 1 Y 1 A LYS 37 ? NZ ? A LYS 37 NZ 9 1 Y 1 A ARG 39 ? CG ? A ARG 39 CG 10 1 Y 1 A ARG 39 ? CD ? A ARG 39 CD 11 1 Y 1 A ARG 39 ? NE ? A ARG 39 NE 12 1 Y 1 A ARG 39 ? CZ ? A ARG 39 CZ 13 1 Y 1 A ARG 39 ? NH1 ? A ARG 39 NH1 14 1 Y 1 A ARG 39 ? NH2 ? A ARG 39 NH2 15 1 Y 1 A ASP 40 ? CG ? A ASP 40 CG 16 1 Y 1 A ASP 40 ? OD1 ? A ASP 40 OD1 17 1 Y 1 A ASP 40 ? OD2 ? A ASP 40 OD2 18 1 Y 1 A LYS 43 ? CG ? A LYS 43 CG 19 1 Y 1 A LYS 43 ? CD ? A LYS 43 CD 20 1 Y 1 A LYS 43 ? CE ? A LYS 43 CE 21 1 Y 1 A LYS 43 ? NZ ? A LYS 43 NZ 22 1 Y 1 A LYS 158 ? CG ? A LYS 158 CG 23 1 Y 1 A LYS 158 ? CD ? A LYS 158 CD 24 1 Y 1 A LYS 158 ? CE ? A LYS 158 CE 25 1 Y 1 A LYS 158 ? NZ ? A LYS 158 NZ 26 1 Y 1 A LYS 196 ? CG ? A LYS 196 CG 27 1 Y 1 A LYS 196 ? CD ? A LYS 196 CD 28 1 Y 1 A LYS 196 ? CE ? A LYS 196 CE 29 1 Y 1 A LYS 196 ? NZ ? A LYS 196 NZ 30 1 Y 1 A LYS 202 ? CG ? A LYS 202 CG 31 1 Y 1 A LYS 202 ? CD ? A LYS 202 CD 32 1 Y 1 A LYS 202 ? CE ? A LYS 202 CE 33 1 Y 1 A LYS 202 ? NZ ? A LYS 202 NZ 34 1 Y 1 A LYS 213 ? CG ? A LYS 213 CG 35 1 Y 1 A LYS 213 ? CD ? A LYS 213 CD 36 1 Y 1 A LYS 213 ? CE ? A LYS 213 CE 37 1 Y 1 A LYS 213 ? NZ ? A LYS 213 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 1IO2 _cell.length_a 43.540 _cell.length_b 72.990 _cell.length_c 78.320 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IO2 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1IO2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_percent_sol 52.59 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.50 _exptl_crystal_grow.pdbx_details 'PEG 6000, pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type FUJI _diffrn_detector.pdbx_collection_date 1999-11-19 _diffrn_detector.details MONOCHROMETER # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator SI _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-6A _diffrn_source.pdbx_wavelength 1.0000 _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 1IO2 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.000 _reflns.number_obs 15205 _reflns.number_all 52662 _reflns.percent_possible_obs 86.6 _reflns.pdbx_Rmerge_I_obs 0.0540000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.8000 _reflns.B_iso_Wilson_estimate 17.30 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 73.7 _reflns_shell.Rmerge_I_obs 0.2540000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.600 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1IO2 _refine.ls_number_reflns_obs 14723 _refine.ls_number_reflns_all 15068 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF 10000 _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 84.5 _refine.ls_R_factor_obs 0.2230000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2230000 _refine.ls_R_factor_R_free 0.2740000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.8 _refine.ls_number_reflns_R_free 1011 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 22.80 _refine.aniso_B[1][1] 0.150 _refine.aniso_B[2][2] -0.1396 _refine.aniso_B[3][3] 1.246 _refine.aniso_B[1][2] 0.0 _refine.aniso_B[1][3] 0.0 _refine.aniso_B[2][3] 0.0 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.435 _refine.solvent_model_param_bsol 66.4 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1IO2 _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.13 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.34 _refine_analyze.Luzzati_sigma_a_free 0.21 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1652 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 216 _refine_hist.number_atoms_total 1868 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.16 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.9 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.697 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.320 1.5 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 0.597 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 0.297 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 0.502 2.5 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.03 _refine_ls_shell.number_reflns_R_work 546 _refine_ls_shell.R_factor_R_work 0.2180000 _refine_ls_shell.percent_reflns_obs 68.4 _refine_ls_shell.R_factor_R_free 0.2750000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.3 _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1IO2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IO2 _struct.title 'Crystal structure of type 2 ribonuclease h from hyperthermophilic archaeon, thermococcus kodakaraensis kod1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IO2 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'endonuclease, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNH2_PYRKO _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession O74035 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1IO2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 213 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O74035 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 213 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 213 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 29 ? LEU A 36 ? SER A 29 LEU A 36 1 ? 8 HELX_P HELX_P2 2 LYS A 37 ? SER A 41 ? LYS A 37 SER A 41 5 ? 5 HELX_P HELX_P3 3 THR A 45 ? GLY A 58 ? THR A 45 GLY A 58 1 ? 14 HELX_P HELX_P4 4 PRO A 69 ? SER A 75 ? PRO A 69 SER A 75 1 ? 7 HELX_P HELX_P5 5 THR A 79 ? LEU A 95 ? THR A 79 LEU A 95 1 ? 17 HELX_P HELX_P6 6 ASP A 110 ? ARG A 121 ? ASP A 110 ARG A 121 1 ? 12 HELX_P HELX_P7 7 LYS A 133 ? PHE A 138 ? LYS A 133 PHE A 138 1 ? 6 HELX_P HELX_P8 8 PHE A 138 ? GLY A 164 ? PHE A 138 GLY A 164 1 ? 27 HELX_P HELX_P9 9 ASP A 173 ? GLY A 188 ? ASP A 173 GLY A 188 1 ? 16 HELX_P HELX_P10 10 TRP A 198 ? LYS A 212 ? TRP A 198 LYS A 212 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 62 ? LEU A 68 ? ASP A 62 LEU A 68 A 2 MET A 18 ? ASP A 26 ? MET A 18 ASP A 26 A 3 LYS A 2 ? ALA A 9 ? LYS A 2 ALA A 9 A 4 VAL A 101 ? ASP A 105 ? VAL A 101 ASP A 105 A 5 GLU A 127 ? LYS A 131 ? GLU A 127 LYS A 131 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 68 ? N LEU A 68 O MET A 18 ? O MET A 18 A 2 3 O VAL A 25 ? O VAL A 25 N ILE A 3 ? N ILE A 3 A 3 4 N ALA A 4 ? N ALA A 4 O VAL A 101 ? O VAL A 101 A 4 5 N ILE A 102 ? N ILE A 102 O GLU A 127 ? O GLU A 127 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 40 ? ? -106.19 51.86 2 1 PRO A 192 ? ? -76.88 43.50 3 1 LYS A 196 ? ? -38.18 -33.47 4 1 LYS A 212 ? ? -22.76 129.66 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLU N N N N 74 GLU CA C N S 75 GLU C C N N 76 GLU O O N N 77 GLU CB C N N 78 GLU CG C N N 79 GLU CD C N N 80 GLU OE1 O N N 81 GLU OE2 O N N 82 GLU OXT O N N 83 GLU H H N N 84 GLU H2 H N N 85 GLU HA H N N 86 GLU HB2 H N N 87 GLU HB3 H N N 88 GLU HG2 H N N 89 GLU HG3 H N N 90 GLU HE2 H N N 91 GLU HXT H N N 92 GLY N N N N 93 GLY CA C N N 94 GLY C C N N 95 GLY O O N N 96 GLY OXT O N N 97 GLY H H N N 98 GLY H2 H N N 99 GLY HA2 H N N 100 GLY HA3 H N N 101 GLY HXT H N N 102 HIS N N N N 103 HIS CA C N S 104 HIS C C N N 105 HIS O O N N 106 HIS CB C N N 107 HIS CG C Y N 108 HIS ND1 N Y N 109 HIS CD2 C Y N 110 HIS CE1 C Y N 111 HIS NE2 N Y N 112 HIS OXT O N N 113 HIS H H N N 114 HIS H2 H N N 115 HIS HA H N N 116 HIS HB2 H N N 117 HIS HB3 H N N 118 HIS HD1 H N N 119 HIS HD2 H N N 120 HIS HE1 H N N 121 HIS HE2 H N N 122 HIS HXT H N N 123 HOH O O N N 124 HOH H1 H N N 125 HOH H2 H N N 126 ILE N N N N 127 ILE CA C N S 128 ILE C C N N 129 ILE O O N N 130 ILE CB C N S 131 ILE CG1 C N N 132 ILE CG2 C N N 133 ILE CD1 C N N 134 ILE OXT O N N 135 ILE H H N N 136 ILE H2 H N N 137 ILE HA H N N 138 ILE HB H N N 139 ILE HG12 H N N 140 ILE HG13 H N N 141 ILE HG21 H N N 142 ILE HG22 H N N 143 ILE HG23 H N N 144 ILE HD11 H N N 145 ILE HD12 H N N 146 ILE HD13 H N N 147 ILE HXT H N N 148 LEU N N N N 149 LEU CA C N S 150 LEU C C N N 151 LEU O O N N 152 LEU CB C N N 153 LEU CG C N N 154 LEU CD1 C N N 155 LEU CD2 C N N 156 LEU OXT O N N 157 LEU H H N N 158 LEU H2 H N N 159 LEU HA H N N 160 LEU HB2 H N N 161 LEU HB3 H N N 162 LEU HG H N N 163 LEU HD11 H N N 164 LEU HD12 H N N 165 LEU HD13 H N N 166 LEU HD21 H N N 167 LEU HD22 H N N 168 LEU HD23 H N N 169 LEU HXT H N N 170 LYS N N N N 171 LYS CA C N S 172 LYS C C N N 173 LYS O O N N 174 LYS CB C N N 175 LYS CG C N N 176 LYS CD C N N 177 LYS CE C N N 178 LYS NZ N N N 179 LYS OXT O N N 180 LYS H H N N 181 LYS H2 H N N 182 LYS HA H N N 183 LYS HB2 H N N 184 LYS HB3 H N N 185 LYS HG2 H N N 186 LYS HG3 H N N 187 LYS HD2 H N N 188 LYS HD3 H N N 189 LYS HE2 H N N 190 LYS HE3 H N N 191 LYS HZ1 H N N 192 LYS HZ2 H N N 193 LYS HZ3 H N N 194 LYS HXT H N N 195 MET N N N N 196 MET CA C N S 197 MET C C N N 198 MET O O N N 199 MET CB C N N 200 MET CG C N N 201 MET SD S N N 202 MET CE C N N 203 MET OXT O N N 204 MET H H N N 205 MET H2 H N N 206 MET HA H N N 207 MET HB2 H N N 208 MET HB3 H N N 209 MET HG2 H N N 210 MET HG3 H N N 211 MET HE1 H N N 212 MET HE2 H N N 213 MET HE3 H N N 214 MET HXT H N N 215 PHE N N N N 216 PHE CA C N S 217 PHE C C N N 218 PHE O O N N 219 PHE CB C N N 220 PHE CG C Y N 221 PHE CD1 C Y N 222 PHE CD2 C Y N 223 PHE CE1 C Y N 224 PHE CE2 C Y N 225 PHE CZ C Y N 226 PHE OXT O N N 227 PHE H H N N 228 PHE H2 H N N 229 PHE HA H N N 230 PHE HB2 H N N 231 PHE HB3 H N N 232 PHE HD1 H N N 233 PHE HD2 H N N 234 PHE HE1 H N N 235 PHE HE2 H N N 236 PHE HZ H N N 237 PHE HXT H N N 238 PRO N N N N 239 PRO CA C N S 240 PRO C C N N 241 PRO O O N N 242 PRO CB C N N 243 PRO CG C N N 244 PRO CD C N N 245 PRO OXT O N N 246 PRO H H N N 247 PRO HA H N N 248 PRO HB2 H N N 249 PRO HB3 H N N 250 PRO HG2 H N N 251 PRO HG3 H N N 252 PRO HD2 H N N 253 PRO HD3 H N N 254 PRO HXT H N N 255 SER N N N N 256 SER CA C N S 257 SER C C N N 258 SER O O N N 259 SER CB C N N 260 SER OG O N N 261 SER OXT O N N 262 SER H H N N 263 SER H2 H N N 264 SER HA H N N 265 SER HB2 H N N 266 SER HB3 H N N 267 SER HG H N N 268 SER HXT H N N 269 THR N N N N 270 THR CA C N S 271 THR C C N N 272 THR O O N N 273 THR CB C N R 274 THR OG1 O N N 275 THR CG2 C N N 276 THR OXT O N N 277 THR H H N N 278 THR H2 H N N 279 THR HA H N N 280 THR HB H N N 281 THR HG1 H N N 282 THR HG21 H N N 283 THR HG22 H N N 284 THR HG23 H N N 285 THR HXT H N N 286 TRP N N N N 287 TRP CA C N S 288 TRP C C N N 289 TRP O O N N 290 TRP CB C N N 291 TRP CG C Y N 292 TRP CD1 C Y N 293 TRP CD2 C Y N 294 TRP NE1 N Y N 295 TRP CE2 C Y N 296 TRP CE3 C Y N 297 TRP CZ2 C Y N 298 TRP CZ3 C Y N 299 TRP CH2 C Y N 300 TRP OXT O N N 301 TRP H H N N 302 TRP H2 H N N 303 TRP HA H N N 304 TRP HB2 H N N 305 TRP HB3 H N N 306 TRP HD1 H N N 307 TRP HE1 H N N 308 TRP HE3 H N N 309 TRP HZ2 H N N 310 TRP HZ3 H N N 311 TRP HH2 H N N 312 TRP HXT H N N 313 TYR N N N N 314 TYR CA C N S 315 TYR C C N N 316 TYR O O N N 317 TYR CB C N N 318 TYR CG C Y N 319 TYR CD1 C Y N 320 TYR CD2 C Y N 321 TYR CE1 C Y N 322 TYR CE2 C Y N 323 TYR CZ C Y N 324 TYR OH O N N 325 TYR OXT O N N 326 TYR H H N N 327 TYR H2 H N N 328 TYR HA H N N 329 TYR HB2 H N N 330 TYR HB3 H N N 331 TYR HD1 H N N 332 TYR HD2 H N N 333 TYR HE1 H N N 334 TYR HE2 H N N 335 TYR HH H N N 336 TYR HXT H N N 337 VAL N N N N 338 VAL CA C N S 339 VAL C C N N 340 VAL O O N N 341 VAL CB C N N 342 VAL CG1 C N N 343 VAL CG2 C N N 344 VAL OXT O N N 345 VAL H H N N 346 VAL H2 H N N 347 VAL HA H N N 348 VAL HB H N N 349 VAL HG11 H N N 350 VAL HG12 H N N 351 VAL HG13 H N N 352 VAL HG21 H N N 353 VAL HG22 H N N 354 VAL HG23 H N N 355 VAL HXT H N N 356 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLU N CA sing N N 70 GLU N H sing N N 71 GLU N H2 sing N N 72 GLU CA C sing N N 73 GLU CA CB sing N N 74 GLU CA HA sing N N 75 GLU C O doub N N 76 GLU C OXT sing N N 77 GLU CB CG sing N N 78 GLU CB HB2 sing N N 79 GLU CB HB3 sing N N 80 GLU CG CD sing N N 81 GLU CG HG2 sing N N 82 GLU CG HG3 sing N N 83 GLU CD OE1 doub N N 84 GLU CD OE2 sing N N 85 GLU OE2 HE2 sing N N 86 GLU OXT HXT sing N N 87 GLY N CA sing N N 88 GLY N H sing N N 89 GLY N H2 sing N N 90 GLY CA C sing N N 91 GLY CA HA2 sing N N 92 GLY CA HA3 sing N N 93 GLY C O doub N N 94 GLY C OXT sing N N 95 GLY OXT HXT sing N N 96 HIS N CA sing N N 97 HIS N H sing N N 98 HIS N H2 sing N N 99 HIS CA C sing N N 100 HIS CA CB sing N N 101 HIS CA HA sing N N 102 HIS C O doub N N 103 HIS C OXT sing N N 104 HIS CB CG sing N N 105 HIS CB HB2 sing N N 106 HIS CB HB3 sing N N 107 HIS CG ND1 sing Y N 108 HIS CG CD2 doub Y N 109 HIS ND1 CE1 doub Y N 110 HIS ND1 HD1 sing N N 111 HIS CD2 NE2 sing Y N 112 HIS CD2 HD2 sing N N 113 HIS CE1 NE2 sing Y N 114 HIS CE1 HE1 sing N N 115 HIS NE2 HE2 sing N N 116 HIS OXT HXT sing N N 117 HOH O H1 sing N N 118 HOH O H2 sing N N 119 ILE N CA sing N N 120 ILE N H sing N N 121 ILE N H2 sing N N 122 ILE CA C sing N N 123 ILE CA CB sing N N 124 ILE CA HA sing N N 125 ILE C O doub N N 126 ILE C OXT sing N N 127 ILE CB CG1 sing N N 128 ILE CB CG2 sing N N 129 ILE CB HB sing N N 130 ILE CG1 CD1 sing N N 131 ILE CG1 HG12 sing N N 132 ILE CG1 HG13 sing N N 133 ILE CG2 HG21 sing N N 134 ILE CG2 HG22 sing N N 135 ILE CG2 HG23 sing N N 136 ILE CD1 HD11 sing N N 137 ILE CD1 HD12 sing N N 138 ILE CD1 HD13 sing N N 139 ILE OXT HXT sing N N 140 LEU N CA sing N N 141 LEU N H sing N N 142 LEU N H2 sing N N 143 LEU CA C sing N N 144 LEU CA CB sing N N 145 LEU CA HA sing N N 146 LEU C O doub N N 147 LEU C OXT sing N N 148 LEU CB CG sing N N 149 LEU CB HB2 sing N N 150 LEU CB HB3 sing N N 151 LEU CG CD1 sing N N 152 LEU CG CD2 sing N N 153 LEU CG HG sing N N 154 LEU CD1 HD11 sing N N 155 LEU CD1 HD12 sing N N 156 LEU CD1 HD13 sing N N 157 LEU CD2 HD21 sing N N 158 LEU CD2 HD22 sing N N 159 LEU CD2 HD23 sing N N 160 LEU OXT HXT sing N N 161 LYS N CA sing N N 162 LYS N H sing N N 163 LYS N H2 sing N N 164 LYS CA C sing N N 165 LYS CA CB sing N N 166 LYS CA HA sing N N 167 LYS C O doub N N 168 LYS C OXT sing N N 169 LYS CB CG sing N N 170 LYS CB HB2 sing N N 171 LYS CB HB3 sing N N 172 LYS CG CD sing N N 173 LYS CG HG2 sing N N 174 LYS CG HG3 sing N N 175 LYS CD CE sing N N 176 LYS CD HD2 sing N N 177 LYS CD HD3 sing N N 178 LYS CE NZ sing N N 179 LYS CE HE2 sing N N 180 LYS CE HE3 sing N N 181 LYS NZ HZ1 sing N N 182 LYS NZ HZ2 sing N N 183 LYS NZ HZ3 sing N N 184 LYS OXT HXT sing N N 185 MET N CA sing N N 186 MET N H sing N N 187 MET N H2 sing N N 188 MET CA C sing N N 189 MET CA CB sing N N 190 MET CA HA sing N N 191 MET C O doub N N 192 MET C OXT sing N N 193 MET CB CG sing N N 194 MET CB HB2 sing N N 195 MET CB HB3 sing N N 196 MET CG SD sing N N 197 MET CG HG2 sing N N 198 MET CG HG3 sing N N 199 MET SD CE sing N N 200 MET CE HE1 sing N N 201 MET CE HE2 sing N N 202 MET CE HE3 sing N N 203 MET OXT HXT sing N N 204 PHE N CA sing N N 205 PHE N H sing N N 206 PHE N H2 sing N N 207 PHE CA C sing N N 208 PHE CA CB sing N N 209 PHE CA HA sing N N 210 PHE C O doub N N 211 PHE C OXT sing N N 212 PHE CB CG sing N N 213 PHE CB HB2 sing N N 214 PHE CB HB3 sing N N 215 PHE CG CD1 doub Y N 216 PHE CG CD2 sing Y N 217 PHE CD1 CE1 sing Y N 218 PHE CD1 HD1 sing N N 219 PHE CD2 CE2 doub Y N 220 PHE CD2 HD2 sing N N 221 PHE CE1 CZ doub Y N 222 PHE CE1 HE1 sing N N 223 PHE CE2 CZ sing Y N 224 PHE CE2 HE2 sing N N 225 PHE CZ HZ sing N N 226 PHE OXT HXT sing N N 227 PRO N CA sing N N 228 PRO N CD sing N N 229 PRO N H sing N N 230 PRO CA C sing N N 231 PRO CA CB sing N N 232 PRO CA HA sing N N 233 PRO C O doub N N 234 PRO C OXT sing N N 235 PRO CB CG sing N N 236 PRO CB HB2 sing N N 237 PRO CB HB3 sing N N 238 PRO CG CD sing N N 239 PRO CG HG2 sing N N 240 PRO CG HG3 sing N N 241 PRO CD HD2 sing N N 242 PRO CD HD3 sing N N 243 PRO OXT HXT sing N N 244 SER N CA sing N N 245 SER N H sing N N 246 SER N H2 sing N N 247 SER CA C sing N N 248 SER CA CB sing N N 249 SER CA HA sing N N 250 SER C O doub N N 251 SER C OXT sing N N 252 SER CB OG sing N N 253 SER CB HB2 sing N N 254 SER CB HB3 sing N N 255 SER OG HG sing N N 256 SER OXT HXT sing N N 257 THR N CA sing N N 258 THR N H sing N N 259 THR N H2 sing N N 260 THR CA C sing N N 261 THR CA CB sing N N 262 THR CA HA sing N N 263 THR C O doub N N 264 THR C OXT sing N N 265 THR CB OG1 sing N N 266 THR CB CG2 sing N N 267 THR CB HB sing N N 268 THR OG1 HG1 sing N N 269 THR CG2 HG21 sing N N 270 THR CG2 HG22 sing N N 271 THR CG2 HG23 sing N N 272 THR OXT HXT sing N N 273 TRP N CA sing N N 274 TRP N H sing N N 275 TRP N H2 sing N N 276 TRP CA C sing N N 277 TRP CA CB sing N N 278 TRP CA HA sing N N 279 TRP C O doub N N 280 TRP C OXT sing N N 281 TRP CB CG sing N N 282 TRP CB HB2 sing N N 283 TRP CB HB3 sing N N 284 TRP CG CD1 doub Y N 285 TRP CG CD2 sing Y N 286 TRP CD1 NE1 sing Y N 287 TRP CD1 HD1 sing N N 288 TRP CD2 CE2 doub Y N 289 TRP CD2 CE3 sing Y N 290 TRP NE1 CE2 sing Y N 291 TRP NE1 HE1 sing N N 292 TRP CE2 CZ2 sing Y N 293 TRP CE3 CZ3 doub Y N 294 TRP CE3 HE3 sing N N 295 TRP CZ2 CH2 doub Y N 296 TRP CZ2 HZ2 sing N N 297 TRP CZ3 CH2 sing Y N 298 TRP CZ3 HZ3 sing N N 299 TRP CH2 HH2 sing N N 300 TRP OXT HXT sing N N 301 TYR N CA sing N N 302 TYR N H sing N N 303 TYR N H2 sing N N 304 TYR CA C sing N N 305 TYR CA CB sing N N 306 TYR CA HA sing N N 307 TYR C O doub N N 308 TYR C OXT sing N N 309 TYR CB CG sing N N 310 TYR CB HB2 sing N N 311 TYR CB HB3 sing N N 312 TYR CG CD1 doub Y N 313 TYR CG CD2 sing Y N 314 TYR CD1 CE1 sing Y N 315 TYR CD1 HD1 sing N N 316 TYR CD2 CE2 doub Y N 317 TYR CD2 HD2 sing N N 318 TYR CE1 CZ doub Y N 319 TYR CE1 HE1 sing N N 320 TYR CE2 CZ sing Y N 321 TYR CE2 HE2 sing N N 322 TYR CZ OH sing N N 323 TYR OH HH sing N N 324 TYR OXT HXT sing N N 325 VAL N CA sing N N 326 VAL N H sing N N 327 VAL N H2 sing N N 328 VAL CA C sing N N 329 VAL CA CB sing N N 330 VAL CA HA sing N N 331 VAL C O doub N N 332 VAL C OXT sing N N 333 VAL CB CG1 sing N N 334 VAL CB CG2 sing N N 335 VAL CB HB sing N N 336 VAL CG1 HG11 sing N N 337 VAL CG1 HG12 sing N N 338 VAL CG1 HG13 sing N N 339 VAL CG2 HG21 sing N N 340 VAL CG2 HG22 sing N N 341 VAL CG2 HG23 sing N N 342 VAL OXT HXT sing N N 343 # _atom_sites.entry_id 1IO2 _atom_sites.fract_transf_matrix[1][1] 0.022967 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012768 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_