HEADER LIGASE 25-OCT-01 1IRX TITLE CRYSTAL STRUCTURE OF CLASS I LYSYL-TRNA SYNTHETASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 6.1.1.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; SOURCE 3 ORGANISM_TAXID: 53953; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA SANDWITCH, ZINC-BINDING STRUCTURE, ROSSMANN FOLD, ALPHA-HELIX KEYWDS 2 CAGE, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 3 STRUCTURAL GENOMICS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR O.NUREKI,T.TERADA,R.ISHITANI,A.AMBROGELLY,M.IBBA,D.SOLL,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 27-DEC-23 1IRX 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1IRX 1 VERSN REVDAT 2 14-JAN-03 1IRX 1 REMARK REVDAT 1 17-APR-02 1IRX 0 JRNL AUTH T.TERADA,O.NUREKI,R.ISHITANI,A.AMBROGELLY,M.IBBA,D.SOLL, JRNL AUTH 2 S.YOKOYAMA JRNL TITL FUNCTIONAL CONVERGENCE OF TWO LYSYL-TRNA SYNTHETASES WITH JRNL TITL 2 UNRELATED TOPOLOGIES. JRNL REF NAT.STRUCT.BIOL. V. 9 257 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 11887185 JRNL DOI 10.1038/NSB777 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 13821 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 15.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2073 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8502 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 248 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.92 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IRX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-OCT-01. REMARK 100 THE DEPOSITION ID IS D_1000005218. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792, 0.9795, 0.9824, 0.9724 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13821 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.17400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.38350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 LYS A 277 REMARK 465 GLY A 278 REMARK 465 LYS A 279 REMARK 465 MET A 280 REMARK 465 SER A 281 REMARK 465 GLY A 282 REMARK 465 SER A 283 REMARK 465 LYS A 284 REMARK 465 GLY A 285 REMARK 465 GLY A 343 REMARK 465 LYS A 344 REMARK 465 GLY A 345 REMARK 465 ASP A 346 REMARK 465 ASP A 347 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 LYS B 277 REMARK 465 GLY B 278 REMARK 465 LYS B 279 REMARK 465 MET B 280 REMARK 465 SER B 281 REMARK 465 GLY B 282 REMARK 465 SER B 283 REMARK 465 LYS B 284 REMARK 465 GLY B 285 REMARK 465 GLY B 343 REMARK 465 LYS B 344 REMARK 465 GLY B 345 REMARK 465 ASP B 346 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU B 434 NH2 ARG B 518 2.15 REMARK 500 O ALA A 243 OD1 ASP A 248 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 14 -77.21 -74.92 REMARK 500 GLU A 15 -74.20 -40.65 REMARK 500 ARG A 72 -73.03 -70.51 REMARK 500 PRO A 75 -170.26 -56.27 REMARK 500 ASN A 77 -19.46 70.83 REMARK 500 GLU A 81 9.31 -65.32 REMARK 500 SER A 91 2.41 -70.00 REMARK 500 PRO A 94 -179.19 -60.36 REMARK 500 ASN A 169 55.74 -96.01 REMARK 500 PRO A 172 22.82 -77.10 REMARK 500 HIS A 180 -6.62 -145.77 REMARK 500 ASP A 190 -126.62 -97.69 REMARK 500 TRP A 193 -150.90 37.07 REMARK 500 LYS A 194 122.79 30.96 REMARK 500 LYS A 198 79.29 -112.71 REMARK 500 CYS A 199 142.50 -38.00 REMARK 500 GLU A 201 -104.41 89.33 REMARK 500 HIS A 203 169.89 176.16 REMARK 500 SER A 211 -143.28 -83.21 REMARK 500 VAL A 231 119.90 -33.62 REMARK 500 GLU A 234 103.96 -162.18 REMARK 500 ALA A 243 -83.56 -4.22 REMARK 500 VAL A 340 11.04 -69.10 REMARK 500 GLU A 363 -62.80 -94.12 REMARK 500 ALA A 367 123.05 -30.59 REMARK 500 HIS A 382 12.74 -69.52 REMARK 500 SER A 403 -161.52 -71.05 REMARK 500 PHE A 463 165.83 179.49 REMARK 500 GLU A 522 23.08 -143.35 REMARK 500 PRO B 30 59.52 -68.50 REMARK 500 PHE B 71 80.43 -68.69 REMARK 500 PRO B 75 158.86 -45.99 REMARK 500 ASN B 77 -27.78 178.04 REMARK 500 GLU B 81 31.39 -73.52 REMARK 500 TRP B 82 47.31 -99.54 REMARK 500 PRO B 96 9.32 -58.78 REMARK 500 GLU B 101 -72.24 -53.75 REMARK 500 LEU B 130 -37.40 64.41 REMARK 500 GLU B 138 16.14 -57.57 REMARK 500 PRO B 172 34.25 -65.17 REMARK 500 GLU B 179 43.51 -97.72 REMARK 500 HIS B 180 -15.27 178.48 REMARK 500 ARG B 181 -128.14 63.00 REMARK 500 ARG B 182 157.72 54.20 REMARK 500 ASP B 190 -162.99 -78.58 REMARK 500 TRP B 193 -32.31 85.23 REMARK 500 PRO B 200 84.55 -52.40 REMARK 500 GLU B 201 -14.58 -174.06 REMARK 500 GLU B 204 -135.83 -129.75 REMARK 500 HIS B 228 -77.93 -49.53 REMARK 500 REMARK 500 THIS ENTRY HAS 64 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 600 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 95 OD1 REMARK 620 2 CYS A 99 SG 116.9 REMARK 620 3 HIS A 100 ND1 109.9 105.5 REMARK 620 4 HIS A 106 ND1 120.9 98.0 103.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 177 SG REMARK 620 2 CYS A 199 SG 149.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 600 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 95 OD1 REMARK 620 2 CYS B 99 SG 63.8 REMARK 620 3 HIS B 100 N 71.4 89.0 REMARK 620 4 HIS B 100 ND1 145.9 140.7 83.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TRT001000216.1 RELATED DB: TARGETDB DBREF 1IRX A 1 523 UNP O57963 SYK_PYRHO 1 523 DBREF 1IRX B 1 523 UNP O57963 SYK_PYRHO 1 523 SEQADV 1IRX LEU A 124 UNP O57963 PHE 124 CONFLICT SEQADV 1IRX GLU A 331 UNP O57963 ASP 331 CONFLICT SEQADV 1IRX LEU B 124 UNP O57963 PHE 124 CONFLICT SEQADV 1IRX GLU B 331 UNP O57963 ASP 331 CONFLICT SEQRES 1 A 523 MET VAL HIS TRP ALA ASP TYR ILE ALA ASP LYS ILE ILE SEQRES 2 A 523 ARG GLU ARG GLY GLU LYS GLU LYS TYR VAL VAL GLU SER SEQRES 3 A 523 GLY ILE THR PRO SER GLY TYR VAL HIS VAL GLY ASN PHE SEQRES 4 A 523 ARG GLU LEU PHE THR ALA TYR ILE VAL GLY HIS ALA LEU SEQRES 5 A 523 ARG ASP LYS GLY TYR GLU VAL ARG HIS ILE HIS MET TRP SEQRES 6 A 523 ASP ASP TYR ASP ARG PHE ARG LYS VAL PRO ARG ASN VAL SEQRES 7 A 523 PRO GLN GLU TRP LYS ASP TYR LEU GLY MET PRO ILE SER SEQRES 8 A 523 GLU VAL PRO ASP PRO TRP GLY CYS HIS GLU SER TYR ALA SEQRES 9 A 523 GLU HIS PHE MET ARG LYS PHE GLU GLU GLU VAL GLU LYS SEQRES 10 A 523 LEU GLY ILE GLU VAL ASP LEU LEU TYR ALA SER GLU LEU SEQRES 11 A 523 TYR LYS ARG GLY GLU TYR SER GLU GLU ILE ARG LEU ALA SEQRES 12 A 523 PHE GLU LYS ARG ASP LYS ILE MET GLU ILE LEU ASN LYS SEQRES 13 A 523 TYR ARG GLU ILE ALA LYS GLN PRO PRO LEU PRO GLU ASN SEQRES 14 A 523 TRP TRP PRO ALA MET VAL TYR CYS PRO GLU HIS ARG ARG SEQRES 15 A 523 GLU ALA GLU ILE ILE GLU TRP ASP GLY GLY TRP LYS VAL SEQRES 16 A 523 LYS TYR LYS CYS PRO GLU GLY HIS GLU GLY TRP VAL ASP SEQRES 17 A 523 ILE ARG SER GLY ASN VAL LYS LEU ARG TRP ARG VAL ASP SEQRES 18 A 523 TRP PRO MET ARG TRP SER HIS PHE GLY VAL ASP PHE GLU SEQRES 19 A 523 PRO ALA GLY LYS ASP HIS LEU VAL ALA GLY SER SER TYR SEQRES 20 A 523 ASP THR GLY LYS GLU ILE ILE LYS GLU VAL TYR GLY LYS SEQRES 21 A 523 GLU ALA PRO LEU SER LEU MET TYR GLU PHE VAL GLY ILE SEQRES 22 A 523 LYS GLY GLN LYS GLY LYS MET SER GLY SER LYS GLY ASN SEQRES 23 A 523 VAL ILE LEU LEU SER ASP LEU TYR GLU VAL LEU GLU PRO SEQRES 24 A 523 GLY LEU VAL ARG PHE ILE TYR ALA ARG HIS ARG PRO ASN SEQRES 25 A 523 LYS GLU ILE LYS ILE ASP LEU GLY LEU GLY ILE LEU ASN SEQRES 26 A 523 LEU TYR ASP GLU PHE GLU LYS VAL GLU ARG ILE TYR PHE SEQRES 27 A 523 GLY VAL GLU GLY GLY LYS GLY ASP ASP GLU GLU LEU ARG SEQRES 28 A 523 ARG THR TYR GLU LEU SER MET PRO LYS LYS PRO GLU ARG SEQRES 29 A 523 LEU VAL ALA GLN ALA PRO PHE ARG PHE LEU ALA VAL LEU SEQRES 30 A 523 VAL GLN LEU PRO HIS LEU THR GLU GLU ASP ILE ILE ASN SEQRES 31 A 523 VAL LEU ILE LYS GLN GLY HIS ILE PRO ARG ASP LEU SER SEQRES 32 A 523 LYS GLU ASP VAL GLU ARG VAL LYS LEU ARG ILE ASN LEU SEQRES 33 A 523 ALA ARG ASN TRP VAL LYS LYS TYR ALA PRO GLU ASP VAL SEQRES 34 A 523 LYS PHE SER ILE LEU GLU LYS PRO PRO GLU VAL GLU VAL SEQRES 35 A 523 SER GLU ASP VAL ARG GLU ALA MET ASN GLU VAL ALA GLU SEQRES 36 A 523 TRP LEU GLU ASN HIS GLU GLU PHE SER VAL GLU GLU PHE SEQRES 37 A 523 ASN ASN ILE LEU PHE GLU VAL ALA LYS ARG ARG GLY ILE SEQRES 38 A 523 SER SER ARG GLU TRP PHE SER THR LEU TYR ARG LEU PHE SEQRES 39 A 523 ILE GLY LYS GLU ARG GLY PRO ARG LEU ALA SER PHE LEU SEQRES 40 A 523 ALA SER LEU ASP ARG SER PHE VAL ILE LYS ARG LEU ARG SEQRES 41 A 523 LEU GLU GLY SEQRES 1 B 523 MET VAL HIS TRP ALA ASP TYR ILE ALA ASP LYS ILE ILE SEQRES 2 B 523 ARG GLU ARG GLY GLU LYS GLU LYS TYR VAL VAL GLU SER SEQRES 3 B 523 GLY ILE THR PRO SER GLY TYR VAL HIS VAL GLY ASN PHE SEQRES 4 B 523 ARG GLU LEU PHE THR ALA TYR ILE VAL GLY HIS ALA LEU SEQRES 5 B 523 ARG ASP LYS GLY TYR GLU VAL ARG HIS ILE HIS MET TRP SEQRES 6 B 523 ASP ASP TYR ASP ARG PHE ARG LYS VAL PRO ARG ASN VAL SEQRES 7 B 523 PRO GLN GLU TRP LYS ASP TYR LEU GLY MET PRO ILE SER SEQRES 8 B 523 GLU VAL PRO ASP PRO TRP GLY CYS HIS GLU SER TYR ALA SEQRES 9 B 523 GLU HIS PHE MET ARG LYS PHE GLU GLU GLU VAL GLU LYS SEQRES 10 B 523 LEU GLY ILE GLU VAL ASP LEU LEU TYR ALA SER GLU LEU SEQRES 11 B 523 TYR LYS ARG GLY GLU TYR SER GLU GLU ILE ARG LEU ALA SEQRES 12 B 523 PHE GLU LYS ARG ASP LYS ILE MET GLU ILE LEU ASN LYS SEQRES 13 B 523 TYR ARG GLU ILE ALA LYS GLN PRO PRO LEU PRO GLU ASN SEQRES 14 B 523 TRP TRP PRO ALA MET VAL TYR CYS PRO GLU HIS ARG ARG SEQRES 15 B 523 GLU ALA GLU ILE ILE GLU TRP ASP GLY GLY TRP LYS VAL SEQRES 16 B 523 LYS TYR LYS CYS PRO GLU GLY HIS GLU GLY TRP VAL ASP SEQRES 17 B 523 ILE ARG SER GLY ASN VAL LYS LEU ARG TRP ARG VAL ASP SEQRES 18 B 523 TRP PRO MET ARG TRP SER HIS PHE GLY VAL ASP PHE GLU SEQRES 19 B 523 PRO ALA GLY LYS ASP HIS LEU VAL ALA GLY SER SER TYR SEQRES 20 B 523 ASP THR GLY LYS GLU ILE ILE LYS GLU VAL TYR GLY LYS SEQRES 21 B 523 GLU ALA PRO LEU SER LEU MET TYR GLU PHE VAL GLY ILE SEQRES 22 B 523 LYS GLY GLN LYS GLY LYS MET SER GLY SER LYS GLY ASN SEQRES 23 B 523 VAL ILE LEU LEU SER ASP LEU TYR GLU VAL LEU GLU PRO SEQRES 24 B 523 GLY LEU VAL ARG PHE ILE TYR ALA ARG HIS ARG PRO ASN SEQRES 25 B 523 LYS GLU ILE LYS ILE ASP LEU GLY LEU GLY ILE LEU ASN SEQRES 26 B 523 LEU TYR ASP GLU PHE GLU LYS VAL GLU ARG ILE TYR PHE SEQRES 27 B 523 GLY VAL GLU GLY GLY LYS GLY ASP ASP GLU GLU LEU ARG SEQRES 28 B 523 ARG THR TYR GLU LEU SER MET PRO LYS LYS PRO GLU ARG SEQRES 29 B 523 LEU VAL ALA GLN ALA PRO PHE ARG PHE LEU ALA VAL LEU SEQRES 30 B 523 VAL GLN LEU PRO HIS LEU THR GLU GLU ASP ILE ILE ASN SEQRES 31 B 523 VAL LEU ILE LYS GLN GLY HIS ILE PRO ARG ASP LEU SER SEQRES 32 B 523 LYS GLU ASP VAL GLU ARG VAL LYS LEU ARG ILE ASN LEU SEQRES 33 B 523 ALA ARG ASN TRP VAL LYS LYS TYR ALA PRO GLU ASP VAL SEQRES 34 B 523 LYS PHE SER ILE LEU GLU LYS PRO PRO GLU VAL GLU VAL SEQRES 35 B 523 SER GLU ASP VAL ARG GLU ALA MET ASN GLU VAL ALA GLU SEQRES 36 B 523 TRP LEU GLU ASN HIS GLU GLU PHE SER VAL GLU GLU PHE SEQRES 37 B 523 ASN ASN ILE LEU PHE GLU VAL ALA LYS ARG ARG GLY ILE SEQRES 38 B 523 SER SER ARG GLU TRP PHE SER THR LEU TYR ARG LEU PHE SEQRES 39 B 523 ILE GLY LYS GLU ARG GLY PRO ARG LEU ALA SER PHE LEU SEQRES 40 B 523 ALA SER LEU ASP ARG SER PHE VAL ILE LYS ARG LEU ARG SEQRES 41 B 523 LEU GLU GLY HET ZN A 600 1 HET ZN A 601 1 HET ZN B 600 1 HET ZN B 602 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *248(H2 O) HELIX 1 1 HIS A 3 ARG A 16 1 14 HELIX 2 2 HIS A 35 ASP A 54 1 20 HELIX 3 3 PRO A 79 LEU A 86 5 8 HELIX 4 4 SER A 102 LYS A 117 1 16 HELIX 5 5 ALA A 127 ARG A 133 1 7 HELIX 6 6 TYR A 136 LYS A 146 1 11 HELIX 7 7 LYS A 146 ALA A 161 1 16 HELIX 8 8 ARG A 217 PHE A 229 1 13 HELIX 9 9 LYS A 238 VAL A 242 1 5 HELIX 10 10 SER A 245 GLY A 259 1 15 HELIX 11 11 LEU A 289 GLU A 295 1 7 HELIX 12 12 GLU A 298 ARG A 308 1 11 HELIX 13 13 GLY A 322 PHE A 338 1 17 HELIX 14 14 GLU A 348 MET A 358 1 11 HELIX 15 15 PRO A 370 VAL A 378 1 9 HELIX 16 16 THR A 384 GLN A 395 1 12 HELIX 17 17 SER A 403 TYR A 424 1 22 HELIX 18 18 PRO A 426 LYS A 430 5 5 HELIX 19 19 SER A 443 ASN A 459 1 17 HELIX 20 20 SER A 464 GLY A 480 1 17 HELIX 21 21 SER A 482 GLY A 496 1 15 HELIX 22 22 ARG A 502 SER A 509 1 8 HELIX 23 23 ASP A 511 ARG A 520 1 10 HELIX 24 24 HIS B 3 GLY B 17 1 15 HELIX 25 25 HIS B 35 ASP B 54 1 20 HELIX 26 26 SER B 102 LYS B 117 1 16 HELIX 27 27 TYR B 136 ARG B 141 1 6 HELIX 28 28 ARG B 141 LYS B 146 1 6 HELIX 29 29 LYS B 146 ALA B 161 1 16 HELIX 30 30 ARG B 217 PHE B 229 1 13 HELIX 31 31 GLY B 237 VAL B 242 1 6 HELIX 32 32 SER B 245 VAL B 257 1 13 HELIX 33 33 LEU B 289 GLU B 295 1 7 HELIX 34 34 GLU B 298 HIS B 309 1 12 HELIX 35 35 GLY B 322 PHE B 338 1 17 HELIX 36 36 GLU B 348 MET B 358 1 11 HELIX 37 37 PRO B 370 VAL B 378 1 9 HELIX 38 38 THR B 384 GLN B 395 1 12 HELIX 39 39 SER B 403 TYR B 424 1 22 HELIX 40 40 SER B 443 HIS B 460 1 18 HELIX 41 41 SER B 464 ARG B 478 1 15 HELIX 42 42 SER B 482 GLY B 496 1 15 HELIX 43 43 ARG B 502 ALA B 508 1 7 HELIX 44 44 ASP B 511 ARG B 520 1 10 SHEET 1 A 3 LYS A 21 ILE A 28 0 SHEET 2 A 3 GLU A 58 TRP A 65 1 O GLU A 58 N TYR A 22 SHEET 3 A 3 ASP A 123 TYR A 126 1 O ASP A 123 N HIS A 63 SHEET 1 B 3 GLU A 183 ALA A 184 0 SHEET 2 B 3 ALA A 173 TYR A 176 -1 N VAL A 175 O ALA A 184 SHEET 3 B 3 VAL A 214 LEU A 216 -1 O LYS A 215 N MET A 174 SHEET 1 C 3 ILE A 186 TRP A 189 0 SHEET 2 C 3 VAL A 195 TYR A 197 -1 O LYS A 196 N GLU A 188 SHEET 3 C 3 TRP A 206 VAL A 207 -1 O VAL A 207 N VAL A 195 SHEET 1 D 2 ALA A 236 GLY A 237 0 SHEET 2 D 2 MET A 267 TYR A 268 1 O TYR A 268 N ALA A 236 SHEET 1 E 2 VAL A 271 ILE A 273 0 SHEET 2 E 2 ILE A 315 ILE A 317 1 O ILE A 315 N GLY A 272 SHEET 1 F 2 LYS B 21 TYR B 22 0 SHEET 2 F 2 GLU B 58 VAL B 59 1 O GLU B 58 N TYR B 22 SHEET 1 G 3 GLU B 25 ILE B 28 0 SHEET 2 G 3 ILE B 62 TRP B 65 1 O MET B 64 N SER B 26 SHEET 3 G 3 ASP B 123 TYR B 126 1 O ASP B 123 N HIS B 63 SHEET 1 H 5 TRP B 206 ASP B 208 0 SHEET 2 H 5 LYS B 194 LYS B 198 -1 N VAL B 195 O VAL B 207 SHEET 3 H 5 ARG B 181 TRP B 189 -1 N GLU B 188 O LYS B 196 SHEET 4 H 5 ALA B 173 CYS B 177 -1 N CYS B 177 O ARG B 181 SHEET 5 H 5 VAL B 214 LEU B 216 -1 O LYS B 215 N MET B 174 SHEET 1 I 2 PHE B 233 ALA B 236 0 SHEET 2 I 2 LEU B 264 MET B 267 1 O LEU B 266 N ALA B 236 SHEET 1 J 2 VAL B 271 ILE B 273 0 SHEET 2 J 2 ILE B 315 ILE B 317 1 O ILE B 315 N GLY B 272 LINK OD1 ASP A 95 ZN ZN A 600 1555 1555 2.02 LINK SG CYS A 99 ZN ZN A 600 1555 1555 2.41 LINK ND1 HIS A 100 ZN ZN A 600 1555 1555 2.30 LINK ND1 HIS A 106 ZN ZN A 600 1555 1555 2.34 LINK SG CYS A 177 ZN ZN A 601 1555 1555 2.74 LINK SG CYS A 199 ZN ZN A 601 1555 1555 2.58 LINK OD1 ASP B 95 ZN ZN B 600 1555 1555 2.65 LINK SG CYS B 99 ZN ZN B 600 1555 1555 2.76 LINK N HIS B 100 ZN ZN B 600 1555 1555 2.58 LINK ND1 HIS B 100 ZN ZN B 600 1555 1555 2.28 SITE 1 AC1 4 ASP A 95 CYS A 99 HIS A 100 HIS A 106 SITE 1 AC2 4 CYS A 177 HIS A 180 CYS A 199 HIS A 203 SITE 1 AC3 4 ASP B 95 CYS B 99 HIS B 100 HIS B 106 SITE 1 AC4 3 CYS B 177 TYR B 197 CYS B 199 CRYST1 58.945 74.767 156.945 90.00 90.26 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016965 0.000000 0.000077 0.00000 SCALE2 0.000000 0.013375 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006372 0.00000