HEADER ENDOCYTOSIS 19-FEB-02 1IU1 TITLE CRYSTAL STRUCTURE OF HUMAN GAMMA1-ADAPTIN EAR DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAMMA1-ADAPTIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EAR DOMAIN; COMPND 5 SYNONYM: ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX4T-2 KEYWDS COATED PITS, ENDOCYTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR T.NOGI,Y.SHIBA,M.KAWASAKI,T.SHIBA,N.MATSUGAKI,N.IGARASHI,M.SUZUKI, AUTHOR 2 R.KATO,H.TAKATSU,K.NAKAYAMA,S.WAKATSUKI REVDAT 5 27-DEC-23 1IU1 1 REMARK REVDAT 4 23-OCT-19 1IU1 1 JRNL REVDAT 3 13-MAY-08 1IU1 1 REMARK VERSN REVDAT 2 07-JAN-03 1IU1 1 REMARK REVDAT 1 10-JUL-02 1IU1 0 JRNL AUTH T.NOGI,Y.SHIBA,M.KAWASAKI,T.SHIBA,N.MATSUGAKI,N.IGARASHI, JRNL AUTH 2 M.SUZUKI,R.KATO,H.TAKATSU,K.NAKAYAMA,S.WAKATSUKI JRNL TITL STRUCTURAL BASIS FOR THE ACCESSORY PROTEIN RECRUITMENT BY JRNL TITL 2 THE GAMMA-ADAPTIN EAR DOMAIN. JRNL REF NAT.STRUCT.BIOL. V. 9 527 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 12042876 JRNL DOI 10.1038/NSB808 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 26023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1363 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1884 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1898 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 132 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.140 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.849 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1936 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2633 ; 1.331 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 241 ; 4.123 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 365 ;18.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 312 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1444 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 798 ; 0.210 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 255 ; 0.127 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.218 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.216 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1223 ; 0.836 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2007 ; 1.610 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 713 ; 2.324 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 626 ; 4.088 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IU1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-FEB-02. REMARK 100 THE DEPOSITION ID IS D_1000005274. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-01; 18-SEP-01; 12-DEC-01 REMARK 200 TEMPERATURE (KELVIN) : 100; 100; 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8; PHOTON REMARK 200 FACTORY REMARK 200 BEAMLINE : BL44XU; BL44XU; BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL; NULL; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.900; 0.900; 0.96, 0.9778, REMARK 200 0.9785 REMARK 200 MONOCHROMATOR : NULL; NULL; NULL REMARK 200 OPTICS : NULL; NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD; CCD REMARK 200 DETECTOR MANUFACTURER : OXFORD PX210; OXFORD PX210; ADSC REMARK 200 QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27518 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 57.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL; NULL; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, MAGNESIUM CHLORIDE, HEPES, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.93450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.06600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.06600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.90175 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.06600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.06600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.96725 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.06600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.06600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 110.90175 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.06600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.06600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.96725 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.93450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 677 REMARK 465 VAL A 678 REMARK 465 PRO A 679 REMARK 465 GLN A 680 REMARK 465 ILE A 681 REMARK 465 SER A 682 REMARK 465 GLN A 683 REMARK 465 PRO A 684 REMARK 465 HIS A 685 REMARK 465 PHE A 686 REMARK 465 LEU A 687 REMARK 465 LEU A 688 REMARK 465 ASP A 689 REMARK 465 GLY A 690 REMARK 465 LEU A 691 REMARK 465 SER A 692 REMARK 465 SER A 693 REMARK 465 GLN A 694 REMARK 465 PRO A 695 REMARK 465 LEU A 696 REMARK 465 PHE A 697 REMARK 465 ASN A 698 REMARK 465 ASP A 699 REMARK 465 ILE A 700 REMARK 465 ALA A 701 REMARK 465 ALA A 702 REMARK 465 SER B 677 REMARK 465 VAL B 678 REMARK 465 PRO B 679 REMARK 465 GLN B 680 REMARK 465 ILE B 681 REMARK 465 SER B 682 REMARK 465 GLN B 683 REMARK 465 PRO B 684 REMARK 465 HIS B 685 REMARK 465 PHE B 686 REMARK 465 LEU B 687 REMARK 465 LEU B 688 REMARK 465 ASP B 689 REMARK 465 GLY B 690 REMARK 465 LEU B 691 REMARK 465 SER B 692 REMARK 465 SER B 693 REMARK 465 GLN B 694 REMARK 465 PRO B 695 REMARK 465 LEU B 696 REMARK 465 PHE B 697 REMARK 465 ASN B 698 REMARK 465 ASP B 699 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 744 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 821 -26.86 -142.87 REMARK 500 SER B 711 89.98 -153.93 REMARK 500 LYS B 803 28.60 48.36 REMARK 500 REMARK 500 REMARK: NULL DBREF 1IU1 A 677 822 UNP O43747 AP1G1_HUMAN 676 821 DBREF 1IU1 B 677 822 UNP O43747 AP1G1_HUMAN 676 821 SEQRES 1 A 146 SER VAL PRO GLN ILE SER GLN PRO HIS PHE LEU LEU ASP SEQRES 2 A 146 GLY LEU SER SER GLN PRO LEU PHE ASN ASP ILE ALA ALA SEQRES 3 A 146 GLY ILE PRO SER ILE THR ALA TYR SER LYS ASN GLY LEU SEQRES 4 A 146 LYS ILE GLU PHE THR PHE GLU ARG SER ASN THR ASN PRO SEQRES 5 A 146 SER VAL THR VAL ILE THR ILE GLN ALA SER ASN SER THR SEQRES 6 A 146 GLU LEU ASP MET THR ASP PHE VAL PHE GLN ALA ALA VAL SEQRES 7 A 146 PRO LYS THR PHE GLN LEU GLN LEU LEU SER PRO SER SER SEQRES 8 A 146 SER ILE VAL PRO ALA PHE ASN THR GLY THR ILE THR GLN SEQRES 9 A 146 VAL ILE LYS VAL LEU ASN PRO GLN LYS GLN GLN LEU ARG SEQRES 10 A 146 MET ARG ILE LYS LEU THR TYR ASN HIS LYS GLY SER ALA SEQRES 11 A 146 MET GLN ASP LEU ALA GLU VAL ASN ASN PHE PRO PRO GLN SEQRES 12 A 146 SER TRP GLN SEQRES 1 B 146 SER VAL PRO GLN ILE SER GLN PRO HIS PHE LEU LEU ASP SEQRES 2 B 146 GLY LEU SER SER GLN PRO LEU PHE ASN ASP ILE ALA ALA SEQRES 3 B 146 GLY ILE PRO SER ILE THR ALA TYR SER LYS ASN GLY LEU SEQRES 4 B 146 LYS ILE GLU PHE THR PHE GLU ARG SER ASN THR ASN PRO SEQRES 5 B 146 SER VAL THR VAL ILE THR ILE GLN ALA SER ASN SER THR SEQRES 6 B 146 GLU LEU ASP MET THR ASP PHE VAL PHE GLN ALA ALA VAL SEQRES 7 B 146 PRO LYS THR PHE GLN LEU GLN LEU LEU SER PRO SER SER SEQRES 8 B 146 SER ILE VAL PRO ALA PHE ASN THR GLY THR ILE THR GLN SEQRES 9 B 146 VAL ILE LYS VAL LEU ASN PRO GLN LYS GLN GLN LEU ARG SEQRES 10 B 146 MET ARG ILE LYS LEU THR TYR ASN HIS LYS GLY SER ALA SEQRES 11 B 146 MET GLN ASP LEU ALA GLU VAL ASN ASN PHE PRO PRO GLN SEQRES 12 B 146 SER TRP GLN FORMUL 3 HOH *132(H2 O) HELIX 1 1 PRO A 771 THR A 775 5 5 HELIX 2 2 PRO A 817 TRP A 821 5 5 HELIX 3 3 PRO B 771 THR B 775 5 5 HELIX 4 4 PRO B 817 TRP B 821 5 5 SHEET 1 A 5 ILE A 707 LYS A 712 0 SHEET 2 A 5 LEU A 715 ARG A 723 -1 O ILE A 717 N TYR A 710 SHEET 3 A 5 VAL A 730 ASN A 739 -1 O VAL A 732 N GLU A 722 SHEET 4 A 5 ILE A 778 LEU A 785 -1 O ILE A 782 N ILE A 733 SHEET 5 A 5 GLN A 759 LEU A 762 -1 N GLN A 761 O LYS A 783 SHEET 1 B 3 THR A 746 ALA A 753 0 SHEET 2 B 3 ARG A 795 HIS A 802 -1 O ASN A 801 N THR A 746 SHEET 3 B 3 SER A 805 GLU A 812 -1 O ALA A 811 N ILE A 796 SHEET 1 C 5 ILE B 707 LYS B 712 0 SHEET 2 C 5 LEU B 715 ARG B 723 -1 O ILE B 717 N TYR B 710 SHEET 3 C 5 VAL B 730 ASN B 739 -1 O VAL B 732 N GLU B 722 SHEET 4 C 5 ILE B 778 LEU B 785 -1 O ILE B 782 N ILE B 733 SHEET 5 C 5 GLN B 759 LEU B 762 -1 N GLN B 761 O LYS B 783 SHEET 1 D 3 THR B 746 ALA B 753 0 SHEET 2 D 3 ARG B 795 HIS B 802 -1 O THR B 799 N VAL B 749 SHEET 3 D 3 SER B 805 GLU B 812 -1 O MET B 807 N TYR B 800 CRYST1 62.132 62.132 147.869 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016095 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016095 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006763 0.00000 TER 941 GLN A 822 TER 1900 GLN B 822 HETATM 1901 O HOH A 1 25.709 16.831 7.180 1.00 14.17 O HETATM 1902 O HOH A 2 8.089 19.273 9.194 1.00 10.32 O HETATM 1903 O HOH A 3 23.977 11.861 14.116 1.00 15.04 O HETATM 1904 O HOH A 4 13.455 17.950 18.285 1.00 15.00 O HETATM 1905 O HOH A 5 18.112 26.988 26.224 1.00 20.27 O HETATM 1906 O HOH A 6 9.567 19.096 11.551 1.00 15.19 O HETATM 1907 O HOH A 7 10.190 25.111 7.624 1.00 12.72 O HETATM 1908 O HOH A 8 22.157 4.701 10.422 1.00 19.00 O HETATM 1909 O HOH A 9 25.453 14.319 13.784 1.00 11.84 O HETATM 1910 O HOH A 10 11.928 11.236 16.624 1.00 17.91 O HETATM 1911 O HOH A 11 16.473 29.130 12.237 1.00 16.24 O HETATM 1912 O HOH A 12 15.093 18.196 4.987 1.00 16.31 O HETATM 1913 O HOH A 13 5.052 10.117 7.267 1.00 23.31 O HETATM 1914 O HOH A 14 34.909 20.862 25.210 1.00 16.05 O HETATM 1915 O HOH A 15 8.464 17.429 13.436 1.00 16.70 O HETATM 1916 O HOH A 16 23.588 22.927 26.462 1.00 17.92 O HETATM 1917 O HOH A 17 13.223 5.910 5.642 1.00 23.42 O HETATM 1918 O HOH A 18 17.444 16.866 -0.087 0.50 14.90 O HETATM 1919 O HOH A 19 20.594 36.910 18.490 1.00 25.96 O HETATM 1920 O HOH A 20 27.197 14.966 22.255 1.00 19.43 O HETATM 1921 O HOH A 21 18.984 29.490 5.158 1.00 20.37 O HETATM 1922 O HOH A 22 18.072 6.434 17.331 1.00 28.69 O HETATM 1923 O HOH A 23 12.809 14.315 5.781 1.00 19.10 O HETATM 1924 O HOH A 24 22.328 12.565 1.874 1.00 19.63 O HETATM 1925 O HOH A 25 32.335 13.337 21.932 1.00 22.46 O HETATM 1926 O HOH A 26 24.459 11.259 5.956 1.00 20.69 O HETATM 1927 O HOH A 27 9.432 16.265 15.800 1.00 23.31 O HETATM 1928 O HOH A 28 15.308 33.412 19.636 1.00 20.93 O HETATM 1929 O HOH A 29 7.602 18.135 3.916 1.00 21.37 O HETATM 1930 O HOH A 30 25.017 22.109 28.583 1.00 29.49 O HETATM 1931 O HOH A 31 8.364 22.289 14.450 1.00 20.94 O HETATM 1932 O HOH A 32 15.860 5.466 3.120 1.00 25.08 O HETATM 1933 O HOH A 33 11.407 3.278 9.528 1.00 27.41 O HETATM 1934 O HOH A 34 23.060 32.622 11.632 1.00 24.70 O HETATM 1935 O HOH A 35 27.995 32.809 21.395 1.00 25.77 O HETATM 1936 O HOH A 36 27.302 13.882 4.968 1.00 23.53 O HETATM 1937 O HOH A 37 22.305 34.952 13.214 1.00 23.98 O HETATM 1938 O HOH A 38 22.942 4.691 15.357 1.00 23.47 O HETATM 1939 O HOH A 39 4.236 16.752 14.886 1.00 24.79 O HETATM 1940 O HOH A 40 5.679 15.327 10.225 1.00 25.27 O HETATM 1941 O HOH A 41 22.647 10.592 3.723 1.00 27.80 O HETATM 1942 O HOH A 42 19.898 8.721 19.870 1.00 23.58 O HETATM 1943 O HOH A 43 6.420 18.523 15.167 1.00 27.64 O HETATM 1944 O HOH A 44 6.888 16.338 5.811 1.00 25.80 O HETATM 1945 O HOH A 45 21.168 14.804 -1.039 1.00 28.28 O HETATM 1946 O HOH A 46 20.670 41.652 20.306 1.00 27.76 O HETATM 1947 O HOH A 47 16.912 25.162 2.593 1.00 28.21 O HETATM 1948 O HOH A 48 33.179 26.960 11.359 1.00 24.99 O HETATM 1949 O HOH A 49 8.880 25.352 17.331 1.00 36.74 O HETATM 1950 O HOH A 50 19.160 10.901 22.905 1.00 33.40 O HETATM 1951 O HOH A 51 30.778 20.483 11.253 1.00 22.64 O HETATM 1952 O HOH A 52 23.950 18.413 27.037 1.00 25.40 O HETATM 1953 O HOH A 53 34.061 36.196 18.474 1.00 28.99 O HETATM 1954 O HOH A 54 29.673 32.127 23.838 1.00 35.03 O HETATM 1955 O HOH A 55 28.677 37.777 13.680 1.00 34.80 O HETATM 1956 O HOH A 56 21.237 22.499 27.302 1.00 32.71 O HETATM 1957 O HOH A 57 26.185 9.963 11.942 1.00 33.90 O HETATM 1958 O HOH A 58 16.072 19.058 2.088 1.00 32.57 O HETATM 1959 O HOH A 59 15.872 9.501 22.912 1.00 34.10 O HETATM 1960 O HOH A 60 36.673 21.815 16.395 1.00 34.70 O HETATM 1961 O HOH A 61 36.417 26.055 14.907 1.00 30.78 O HETATM 1962 O HOH A 62 25.335 5.233 9.761 1.00 42.28 O HETATM 1963 O HOH A 63 36.779 27.751 29.086 1.00 29.95 O HETATM 1964 O HOH A 64 16.209 5.160 5.703 1.00 35.66 O HETATM 1965 O HOH A 65 23.330 29.579 30.686 1.00 28.61 O HETATM 1966 O HOH A 66 34.577 19.677 16.092 1.00 36.16 O HETATM 1967 O HOH A 67 5.315 15.123 16.596 1.00 38.09 O HETATM 1968 O HOH A 68 28.763 15.962 13.346 1.00 26.88 O HETATM 1969 O HOH A 69 13.024 12.144 -3.230 1.00 35.35 O HETATM 1970 O HOH A 70 7.560 16.915 17.218 1.00 41.30 O HETATM 1971 O HOH A 71 29.587 34.907 24.203 1.00 30.65 O HETATM 1972 O HOH A 72 28.525 15.084 24.566 1.00 28.09 O HETATM 1973 O HOH A 73 7.096 23.151 17.698 1.00 37.13 O HETATM 1974 O HOH A 74 25.507 7.043 22.730 1.00 42.45 O HETATM 1975 O HOH A 75 6.987 12.560 5.385 1.00 39.21 O HETATM 1976 O HOH A 76 32.720 29.539 7.634 1.00 46.72 O HETATM 1977 O HOH A 77 15.113 2.790 15.070 1.00 38.99 O HETATM 1978 O HOH A 78 20.539 28.778 29.677 1.00 30.69 O HETATM 1979 O HOH A 79 30.497 26.127 32.925 1.00 39.29 O HETATM 1980 O HOH A 80 21.211 3.663 17.569 1.00 51.66 O HETATM 1981 O HOH A 81 -1.123 8.663 7.477 1.00 42.13 O HETATM 1982 O HOH A 82 25.447 16.493 0.938 1.00 57.37 O HETATM 1983 O HOH A 83 11.659 28.953 17.533 1.00 7.45 O HETATM 1984 O HOH A 106 14.272 23.713 0.041 1.00 29.31 O HETATM 1985 O HOH A 112 4.544 13.277 8.624 1.00 29.20 O HETATM 1986 O HOH B 84 7.641 22.128 8.569 1.00 14.19 O HETATM 1987 O HOH B 85 8.769 25.010 14.437 1.00 16.88 O HETATM 1988 O HOH B 86 20.227 34.723 14.853 1.00 16.78 O HETATM 1989 O HOH B 87 10.864 25.516 5.079 1.00 16.28 O HETATM 1990 O HOH B 88 19.706 39.855 18.818 1.00 23.02 O HETATM 1991 O HOH B 89 17.090 28.681 7.129 1.00 24.40 O HETATM 1992 O HOH B 90 13.532 31.053 10.446 1.00 20.38 O HETATM 1993 O HOH B 91 6.249 17.195 8.365 1.00 17.11 O HETATM 1994 O HOH B 92 -2.506 34.563 12.730 1.00 22.76 O HETATM 1995 O HOH B 93 11.760 28.460 3.548 1.00 19.12 O HETATM 1996 O HOH B 94 7.314 23.030 -0.873 1.00 26.47 O HETATM 1997 O HOH B 95 0.410 26.493 4.701 1.00 21.52 O HETATM 1998 O HOH B 96 16.778 39.715 18.775 1.00 25.47 O HETATM 1999 O HOH B 97 6.177 48.082 8.881 1.00 28.53 O HETATM 2000 O HOH B 98 8.848 39.795 18.525 1.00 28.55 O HETATM 2001 O HOH B 99 15.219 36.001 20.190 1.00 24.09 O HETATM 2002 O HOH B 100 6.020 46.076 7.061 1.00 24.43 O HETATM 2003 O HOH B 101 10.096 46.705 20.486 1.00 24.14 O HETATM 2004 O HOH B 102 13.073 32.864 20.800 1.00 29.18 O HETATM 2005 O HOH B 103 0.845 30.221 16.655 1.00 19.60 O HETATM 2006 O HOH B 104 11.881 44.963 3.267 1.00 31.14 O HETATM 2007 O HOH B 105 3.338 16.148 12.143 1.00 30.47 O HETATM 2008 O HOH B 107 7.958 24.432 -2.920 1.00 27.80 O HETATM 2009 O HOH B 108 3.119 28.469 20.651 1.00 28.43 O HETATM 2010 O HOH B 109 18.360 32.354 5.868 1.00 25.20 O HETATM 2011 O HOH B 110 5.819 18.514 1.757 1.00 27.79 O HETATM 2012 O HOH B 111 6.124 21.309 15.649 1.00 25.32 O HETATM 2013 O HOH B 113 15.538 41.057 20.614 1.00 25.42 O HETATM 2014 O HOH B 114 -1.861 43.420 9.066 1.00 30.22 O HETATM 2015 O HOH B 115 18.937 43.041 10.991 1.00 28.91 O HETATM 2016 O HOH B 116 -2.836 27.919 16.174 1.00 32.76 O HETATM 2017 O HOH B 117 -5.422 35.135 12.869 1.00 31.90 O HETATM 2018 O HOH B 118 10.871 54.495 21.695 1.00 46.37 O HETATM 2019 O HOH B 119 14.279 35.142 -3.220 1.00 31.01 O HETATM 2020 O HOH B 120 -2.153 26.739 4.591 1.00 30.57 O HETATM 2021 O HOH B 121 5.084 44.972 3.650 1.00 37.90 O HETATM 2022 O HOH B 122 5.280 50.952 16.726 1.00 36.16 O HETATM 2023 O HOH B 123 -1.981 34.247 15.445 1.00 31.21 O HETATM 2024 O HOH B 124 19.444 43.068 22.205 1.00 33.44 O HETATM 2025 O HOH B 125 19.604 46.281 14.037 1.00 33.36 O HETATM 2026 O HOH B 126 9.338 55.334 10.422 1.00 34.88 O HETATM 2027 O HOH B 127 22.227 48.543 13.907 1.00 39.69 O HETATM 2028 O HOH B 128 1.082 22.046 18.979 1.00 36.46 O HETATM 2029 O HOH B 129 3.533 32.549 -5.477 1.00 43.21 O HETATM 2030 O HOH B 130 15.839 28.433 -3.784 1.00 41.76 O HETATM 2031 O HOH B 131 -1.584 31.225 18.005 1.00 43.05 O HETATM 2032 O HOH B 132 9.368 56.603 19.157 1.00 40.59 O MASTER 358 0 0 4 16 0 0 6 2030 2 0 24 END