data_1J2I # _entry.id 1J2I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1J2I RCSB RCSB005548 WWPDB D_1000005548 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2003-05-20 _pdbx_database_PDB_obs_spr.pdb_id 1O3Y _pdbx_database_PDB_obs_spr.replace_pdb_id 1J2I _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1J2H 'human GGA1 GAT domain' unspecified PDB 1J2J 'GGA1 GAT N-terminal region in complex with ARF1 GTP form' unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1J2I _pdbx_database_status.recvd_initial_deposition_date 2003-01-05 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shiba, T.' 1 'Kawasaki, M.' 2 'Takatsu, H.' 3 'Nogi, T.' 4 'Matsugaki, N.' 5 'Igarashi, N.' 6 'Suzuki, M.' 7 'Kato, R.' 8 'Nakayama, K.' 9 'Wakatsuki, S.' 10 # _citation.id primary _citation.title 'Molecular mechanism of membrane recruitment of GGA by ARF in lysosomal protein transport' _citation.journal_abbrev NAT.STRUCT.BIOL. _citation.journal_volume 10 _citation.page_first 386 _citation.page_last 393 _citation.year 2003 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_DOI 10.1038/nsb920 _citation.pdbx_database_id_PubMed ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Shiba, T.' 1 primary 'Kawasaki, M.' 2 primary 'Takatsu, H.' 3 primary 'Nogi, T.' 4 primary 'Matsugaki, N.' 5 primary 'Igarashi, N.' 6 primary 'Suzuki, M.' 7 primary 'Kato, R.' 8 primary 'Nakayama, K.' 9 primary 'Wakatsuki, S.' 10 # _cell.entry_id 1J2I _cell.length_a 127.605 _cell.length_b 50.770 _cell.length_c 52.081 _cell.angle_alpha 90.00 _cell.angle_beta 113.37 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J2I _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ADP-ribosylation factor 1' 18951.615 2 ? Q71L 'residues 18-181' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-TRIPHOSPHATE" 523.180 2 ? ? ? ? 4 water nat water 18.015 321 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ARF1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 ARG n 1 5 ILE n 1 6 LEU n 1 7 MET n 1 8 VAL n 1 9 GLY n 1 10 LEU n 1 11 ASP n 1 12 ALA n 1 13 ALA n 1 14 GLY n 1 15 LYS n 1 16 THR n 1 17 THR n 1 18 ILE n 1 19 LEU n 1 20 TYR n 1 21 LYS n 1 22 LEU n 1 23 LYS n 1 24 LEU n 1 25 GLY n 1 26 GLU n 1 27 ILE n 1 28 VAL n 1 29 THR n 1 30 THR n 1 31 ILE n 1 32 PRO n 1 33 THR n 1 34 ILE n 1 35 GLY n 1 36 PHE n 1 37 ASN n 1 38 VAL n 1 39 GLU n 1 40 THR n 1 41 VAL n 1 42 GLU n 1 43 TYR n 1 44 LYS n 1 45 ASN n 1 46 ILE n 1 47 SER n 1 48 PHE n 1 49 THR n 1 50 VAL n 1 51 TRP n 1 52 ASP n 1 53 VAL n 1 54 GLY n 1 55 GLY n 1 56 LEU n 1 57 ASP n 1 58 LYS n 1 59 ILE n 1 60 ARG n 1 61 PRO n 1 62 LEU n 1 63 TRP n 1 64 ARG n 1 65 HIS n 1 66 TYR n 1 67 PHE n 1 68 GLN n 1 69 ASN n 1 70 THR n 1 71 GLN n 1 72 GLY n 1 73 LEU n 1 74 ILE n 1 75 PHE n 1 76 VAL n 1 77 VAL n 1 78 ASP n 1 79 SER n 1 80 ASN n 1 81 ASP n 1 82 ARG n 1 83 GLU n 1 84 ARG n 1 85 VAL n 1 86 ASN n 1 87 GLU n 1 88 ALA n 1 89 ARG n 1 90 GLU n 1 91 GLU n 1 92 LEU n 1 93 MET n 1 94 ARG n 1 95 MET n 1 96 LEU n 1 97 ALA n 1 98 GLU n 1 99 ASP n 1 100 GLU n 1 101 LEU n 1 102 ARG n 1 103 ASP n 1 104 ALA n 1 105 VAL n 1 106 LEU n 1 107 LEU n 1 108 VAL n 1 109 PHE n 1 110 ALA n 1 111 ASN n 1 112 LYS n 1 113 GLN n 1 114 ASP n 1 115 LEU n 1 116 PRO n 1 117 ASN n 1 118 ALA n 1 119 MET n 1 120 ASN n 1 121 ALA n 1 122 ALA n 1 123 GLU n 1 124 ILE n 1 125 THR n 1 126 ASP n 1 127 LYS n 1 128 LEU n 1 129 GLY n 1 130 LEU n 1 131 HIS n 1 132 SER n 1 133 LEU n 1 134 ARG n 1 135 HIS n 1 136 ARG n 1 137 ASN n 1 138 TRP n 1 139 TYR n 1 140 ILE n 1 141 GLN n 1 142 ALA n 1 143 THR n 1 144 CYS n 1 145 ALA n 1 146 THR n 1 147 SER n 1 148 GLY n 1 149 ASP n 1 150 GLY n 1 151 LEU n 1 152 TYR n 1 153 GLU n 1 154 GLY n 1 155 LEU n 1 156 ASP n 1 157 TRP n 1 158 LEU n 1 159 SER n 1 160 ASN n 1 161 GLN n 1 162 LEU n 1 163 ARG n 1 164 ASN n 1 165 GLN n 1 166 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name bacteria _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pProEX HT' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AAH21403 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR ERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL RNQK ; _struct_ref.pdbx_align_begin 18 _struct_ref.pdbx_db_accession 18204741 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1J2I A 3 ? 166 ? 18204741 18 ? 181 ? 18 181 2 1 1J2I B 3 ? 166 ? 18204741 18 ? 181 ? 18 181 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1J2I GLY A 1 ? GB 18204741 ? ? 'CLONING ARTIFACT' 16 1 1 1J2I SER A 2 ? GB 18204741 ? ? 'CLONING ARTIFACT' 17 2 1 1J2I LEU A 56 ? GB 18204741 GLN 71 ENGINEERED 71 3 2 1J2I GLY B 1 ? GB 18204741 ? ? 'CLONING ARTIFACT' 16 4 2 1J2I SER B 2 ? GB 18204741 ? ? 'CLONING ARTIFACT' 17 5 2 1J2I LEU B 56 ? GB 18204741 GLN 71 ENGINEERED 71 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1J2I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.81 _exptl_crystal.density_percent_sol 31.62 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.pdbx_details 'PEG3350, ammonium acetate, acetate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-02-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.977 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL6A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL6A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.977 # _reflns.entry_id 1J2I _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.5 _reflns.d_resolution_low 30 _reflns.number_all 44086 _reflns.number_obs 44072 _reflns.percent_possible_obs 89.8 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 12.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 62.8 _reflns_shell.Rmerge_I_obs 0.201 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1J2I _refine.ls_number_reflns_obs 41851 _refine.ls_number_reflns_all 44072 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.19104 _refine.ls_R_factor_all 0.19104 _refine.ls_R_factor_R_work 0.18998 _refine.ls_R_factor_R_free 0.21084 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2221 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 13.332 _refine.aniso_B[1][1] 0.24 _refine.aniso_B[2][2] 0.12 _refine.aniso_B[3][3] -0.20 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.19 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1HFV' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.087 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R 0.093 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2664 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 66 _refine_hist.number_atoms_solvent 321 _refine_hist.number_atoms_total 3051 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 20.00 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.021 ? 2778 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.384 1.978 ? 3774 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.051 3.000 ? 330 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 11.348 15.000 ? 493 'X-RAY DIFFRACTION' ? r_chiral_restr 0.091 0.200 ? 422 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2064 'X-RAY DIFFRACTION' ? r_nbd_refined 0.248 0.300 ? 1295 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.133 0.500 ? 280 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.217 0.300 ? 91 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.863 0.500 ? 37 'X-RAY DIFFRACTION' ? r_mcbond_it 0.707 1.500 ? 1642 'X-RAY DIFFRACTION' ? r_mcangle_it 1.310 2.000 ? 2640 'X-RAY DIFFRACTION' ? r_scbond_it 2.096 3.000 ? 1136 'X-RAY DIFFRACTION' ? r_scangle_it 3.293 4.500 ? 1134 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_R_work 1910 _refine_ls_shell.R_factor_R_work 0.239 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.269 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 81 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1J2I _struct.title 'Crystal structure of mouse ARF1 (delta17-Q71L), GTP form' _struct.pdbx_descriptor 'ADP-ribosylation factor 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1J2I _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? GLY A 25 ? GLY A 29 GLY A 40 1 ? 12 HELX_P HELX_P2 2 LEU A 56 ? PHE A 67 ? LEU A 71 PHE A 82 5 ? 12 HELX_P HELX_P3 3 ASP A 81 ? GLU A 83 ? ASP A 96 GLU A 98 5 ? 3 HELX_P HELX_P4 4 ARG A 84 ? ALA A 97 ? ARG A 99 ALA A 112 1 ? 14 HELX_P HELX_P5 5 GLU A 98 ? ARG A 102 ? GLU A 113 ARG A 117 5 ? 5 HELX_P HELX_P6 6 ASN A 120 ? GLY A 129 ? ASN A 135 GLY A 144 1 ? 10 HELX_P HELX_P7 7 LEU A 130 ? LEU A 133 ? LEU A 145 LEU A 148 5 ? 4 HELX_P HELX_P8 8 GLY A 150 ? ARG A 163 ? GLY A 165 ARG A 178 1 ? 14 HELX_P HELX_P9 9 GLY B 14 ? GLY B 25 ? GLY B 29 GLY B 40 1 ? 12 HELX_P HELX_P10 10 ILE B 59 ? PHE B 67 ? ILE B 74 PHE B 82 5 ? 9 HELX_P HELX_P11 11 ASP B 81 ? GLU B 83 ? ASP B 96 GLU B 98 5 ? 3 HELX_P HELX_P12 12 ARG B 84 ? ALA B 97 ? ARG B 99 ALA B 112 1 ? 14 HELX_P HELX_P13 13 GLU B 98 ? ARG B 102 ? GLU B 113 ARG B 117 5 ? 5 HELX_P HELX_P14 14 ASN B 120 ? GLY B 129 ? ASN B 135 GLY B 144 1 ? 10 HELX_P HELX_P15 15 LEU B 130 ? LEU B 133 ? LEU B 145 LEU B 148 5 ? 4 HELX_P HELX_P16 16 GLY B 150 ? LEU B 162 ? GLY B 165 LEU B 177 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? D GTP . O2B ? ? ? 1_555 C MG . MG ? ? A GTP 1001 A MG 1002 1_555 ? ? ? ? ? ? ? 2.125 ? metalc2 metalc ? ? D GTP . O2G ? ? ? 1_555 C MG . MG ? ? A GTP 1001 A MG 1002 1_555 ? ? ? ? ? ? ? 2.051 ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 A THR 16 OG1 ? ? A MG 1002 A THR 31 1_555 ? ? ? ? ? ? ? 2.057 ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 A THR 33 OG1 ? ? A MG 1002 A THR 48 1_555 ? ? ? ? ? ? ? 2.135 ? metalc5 metalc ? ? F GTP . O2B ? ? ? 1_555 E MG . MG ? ? B GTP 1001 B MG 1002 1_555 ? ? ? ? ? ? ? 2.193 ? metalc6 metalc ? ? F GTP . O2G ? ? ? 1_555 E MG . MG ? ? B GTP 1001 B MG 1002 1_555 ? ? ? ? ? ? ? 2.134 ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 B THR 16 OG1 ? ? B MG 1002 B THR 31 1_555 ? ? ? ? ? ? ? 2.000 ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 B THR 33 OG1 ? ? B MG 1002 B THR 48 1_555 ? ? ? ? ? ? ? 2.087 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 36 ? TYR A 43 ? PHE A 51 TYR A 58 A 2 ILE A 46 ? VAL A 53 ? ILE A 61 VAL A 68 A 3 MET A 3 ? VAL A 8 ? MET A 18 VAL A 23 A 4 GLY A 72 ? ASP A 78 ? GLY A 87 ASP A 93 A 5 VAL A 105 ? ASN A 111 ? VAL A 120 ASN A 126 A 6 TRP A 138 ? ALA A 142 ? TRP A 153 ALA A 157 B 1 PHE B 36 ? TYR B 43 ? PHE B 51 TYR B 58 B 2 ILE B 46 ? VAL B 53 ? ILE B 61 VAL B 68 B 3 SER B 2 ? VAL B 8 ? SER B 17 VAL B 23 B 4 GLY B 72 ? ASP B 78 ? GLY B 87 ASP B 93 B 5 VAL B 105 ? ASN B 111 ? VAL B 120 ASN B 126 B 6 TRP B 138 ? ALA B 142 ? TRP B 153 ALA B 157 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 41 ? N VAL A 56 O PHE A 48 ? O PHE A 63 A 2 3 O TRP A 51 ? O TRP A 66 N MET A 7 ? N MET A 22 A 3 4 N LEU A 6 ? N LEU A 21 O ILE A 74 ? O ILE A 89 A 4 5 N LEU A 73 ? N LEU A 88 O LEU A 107 ? O LEU A 122 A 5 6 N VAL A 108 ? N VAL A 123 O TYR A 139 ? O TYR A 154 B 1 2 N TYR B 43 ? N TYR B 58 O ILE B 46 ? O ILE B 61 B 2 3 O TRP B 51 ? O TRP B 66 N MET B 7 ? N MET B 22 B 3 4 N LEU B 6 ? N LEU B 21 O ILE B 74 ? O ILE B 89 B 4 5 N LEU B 73 ? N LEU B 88 O VAL B 105 ? O VAL B 120 B 5 6 N VAL B 108 ? N VAL B 123 O TYR B 139 ? O TYR B 154 # _database_PDB_matrix.entry_id 1J2I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1J2I _atom_sites.fract_transf_matrix[1][1] 0.007837 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003386 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019697 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020916 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 16 16 GLY GLY A . n A 1 2 SER 2 17 17 SER SER A . n A 1 3 MET 3 18 18 MET MET A . n A 1 4 ARG 4 19 19 ARG ARG A . n A 1 5 ILE 5 20 20 ILE ILE A . n A 1 6 LEU 6 21 21 LEU LEU A . n A 1 7 MET 7 22 22 MET MET A . n A 1 8 VAL 8 23 23 VAL VAL A . n A 1 9 GLY 9 24 24 GLY GLY A . n A 1 10 LEU 10 25 25 LEU LEU A . n A 1 11 ASP 11 26 26 ASP ASP A . n A 1 12 ALA 12 27 27 ALA ALA A . n A 1 13 ALA 13 28 28 ALA ALA A . n A 1 14 GLY 14 29 29 GLY GLY A . n A 1 15 LYS 15 30 30 LYS LYS A . n A 1 16 THR 16 31 31 THR THR A . n A 1 17 THR 17 32 32 THR THR A . n A 1 18 ILE 18 33 33 ILE ILE A . n A 1 19 LEU 19 34 34 LEU LEU A . n A 1 20 TYR 20 35 35 TYR TYR A . n A 1 21 LYS 21 36 36 LYS LYS A . n A 1 22 LEU 22 37 37 LEU LEU A . n A 1 23 LYS 23 38 38 LYS LYS A . n A 1 24 LEU 24 39 39 LEU LEU A . n A 1 25 GLY 25 40 40 GLY GLY A . n A 1 26 GLU 26 41 41 GLU GLU A . n A 1 27 ILE 27 42 42 ILE ILE A . n A 1 28 VAL 28 43 43 VAL VAL A . n A 1 29 THR 29 44 44 THR THR A . n A 1 30 THR 30 45 45 THR THR A . n A 1 31 ILE 31 46 46 ILE ILE A . n A 1 32 PRO 32 47 47 PRO PRO A . n A 1 33 THR 33 48 48 THR THR A . n A 1 34 ILE 34 49 49 ILE ILE A . n A 1 35 GLY 35 50 50 GLY GLY A . n A 1 36 PHE 36 51 51 PHE PHE A . n A 1 37 ASN 37 52 52 ASN ASN A . n A 1 38 VAL 38 53 53 VAL VAL A . n A 1 39 GLU 39 54 54 GLU GLU A . n A 1 40 THR 40 55 55 THR THR A . n A 1 41 VAL 41 56 56 VAL VAL A . n A 1 42 GLU 42 57 57 GLU GLU A . n A 1 43 TYR 43 58 58 TYR TYR A . n A 1 44 LYS 44 59 59 LYS LYS A . n A 1 45 ASN 45 60 60 ASN ASN A . n A 1 46 ILE 46 61 61 ILE ILE A . n A 1 47 SER 47 62 62 SER SER A . n A 1 48 PHE 48 63 63 PHE PHE A . n A 1 49 THR 49 64 64 THR THR A . n A 1 50 VAL 50 65 65 VAL VAL A . n A 1 51 TRP 51 66 66 TRP TRP A . n A 1 52 ASP 52 67 67 ASP ASP A . n A 1 53 VAL 53 68 68 VAL VAL A . n A 1 54 GLY 54 69 69 GLY GLY A . n A 1 55 GLY 55 70 70 GLY GLY A . n A 1 56 LEU 56 71 71 LEU LEU A . n A 1 57 ASP 57 72 72 ASP ASP A . n A 1 58 LYS 58 73 73 LYS LYS A . n A 1 59 ILE 59 74 74 ILE ILE A . n A 1 60 ARG 60 75 75 ARG ARG A . n A 1 61 PRO 61 76 76 PRO PRO A . n A 1 62 LEU 62 77 77 LEU LEU A . n A 1 63 TRP 63 78 78 TRP TRP A . n A 1 64 ARG 64 79 79 ARG ARG A . n A 1 65 HIS 65 80 80 HIS HIS A . n A 1 66 TYR 66 81 81 TYR TYR A . n A 1 67 PHE 67 82 82 PHE PHE A . n A 1 68 GLN 68 83 83 GLN GLN A . n A 1 69 ASN 69 84 84 ASN ASN A . n A 1 70 THR 70 85 85 THR THR A . n A 1 71 GLN 71 86 86 GLN GLN A . n A 1 72 GLY 72 87 87 GLY GLY A . n A 1 73 LEU 73 88 88 LEU LEU A . n A 1 74 ILE 74 89 89 ILE ILE A . n A 1 75 PHE 75 90 90 PHE PHE A . n A 1 76 VAL 76 91 91 VAL VAL A . n A 1 77 VAL 77 92 92 VAL VAL A . n A 1 78 ASP 78 93 93 ASP ASP A . n A 1 79 SER 79 94 94 SER SER A . n A 1 80 ASN 80 95 95 ASN ASN A . n A 1 81 ASP 81 96 96 ASP ASP A . n A 1 82 ARG 82 97 97 ARG ARG A . n A 1 83 GLU 83 98 98 GLU GLU A . n A 1 84 ARG 84 99 99 ARG ARG A . n A 1 85 VAL 85 100 100 VAL VAL A . n A 1 86 ASN 86 101 101 ASN ASN A . n A 1 87 GLU 87 102 102 GLU GLU A . n A 1 88 ALA 88 103 103 ALA ALA A . n A 1 89 ARG 89 104 104 ARG ARG A . n A 1 90 GLU 90 105 105 GLU GLU A . n A 1 91 GLU 91 106 106 GLU GLU A . n A 1 92 LEU 92 107 107 LEU LEU A . n A 1 93 MET 93 108 108 MET MET A . n A 1 94 ARG 94 109 109 ARG ARG A . n A 1 95 MET 95 110 110 MET MET A . n A 1 96 LEU 96 111 111 LEU LEU A . n A 1 97 ALA 97 112 112 ALA ALA A . n A 1 98 GLU 98 113 113 GLU GLU A . n A 1 99 ASP 99 114 114 ASP ASP A . n A 1 100 GLU 100 115 115 GLU GLU A . n A 1 101 LEU 101 116 116 LEU LEU A . n A 1 102 ARG 102 117 117 ARG ARG A . n A 1 103 ASP 103 118 118 ASP ASP A . n A 1 104 ALA 104 119 119 ALA ALA A . n A 1 105 VAL 105 120 120 VAL VAL A . n A 1 106 LEU 106 121 121 LEU LEU A . n A 1 107 LEU 107 122 122 LEU LEU A . n A 1 108 VAL 108 123 123 VAL VAL A . n A 1 109 PHE 109 124 124 PHE PHE A . n A 1 110 ALA 110 125 125 ALA ALA A . n A 1 111 ASN 111 126 126 ASN ASN A . n A 1 112 LYS 112 127 127 LYS LYS A . n A 1 113 GLN 113 128 128 GLN GLN A . n A 1 114 ASP 114 129 129 ASP ASP A . n A 1 115 LEU 115 130 130 LEU LEU A . n A 1 116 PRO 116 131 131 PRO PRO A . n A 1 117 ASN 117 132 132 ASN ASN A . n A 1 118 ALA 118 133 133 ALA ALA A . n A 1 119 MET 119 134 134 MET MET A . n A 1 120 ASN 120 135 135 ASN ASN A . n A 1 121 ALA 121 136 136 ALA ALA A . n A 1 122 ALA 122 137 137 ALA ALA A . n A 1 123 GLU 123 138 138 GLU GLU A . n A 1 124 ILE 124 139 139 ILE ILE A . n A 1 125 THR 125 140 140 THR THR A . n A 1 126 ASP 126 141 141 ASP ASP A . n A 1 127 LYS 127 142 142 LYS LYS A . n A 1 128 LEU 128 143 143 LEU LEU A . n A 1 129 GLY 129 144 144 GLY GLY A . n A 1 130 LEU 130 145 145 LEU LEU A . n A 1 131 HIS 131 146 146 HIS HIS A . n A 1 132 SER 132 147 147 SER SER A . n A 1 133 LEU 133 148 148 LEU LEU A . n A 1 134 ARG 134 149 149 ARG ARG A . n A 1 135 HIS 135 150 150 HIS HIS A . n A 1 136 ARG 136 151 151 ARG ARG A . n A 1 137 ASN 137 152 152 ASN ASN A . n A 1 138 TRP 138 153 153 TRP TRP A . n A 1 139 TYR 139 154 154 TYR TYR A . n A 1 140 ILE 140 155 155 ILE ILE A . n A 1 141 GLN 141 156 156 GLN GLN A . n A 1 142 ALA 142 157 157 ALA ALA A . n A 1 143 THR 143 158 158 THR THR A . n A 1 144 CYS 144 159 159 CYS CYS A . n A 1 145 ALA 145 160 160 ALA ALA A . n A 1 146 THR 146 161 161 THR THR A . n A 1 147 SER 147 162 162 SER SER A . n A 1 148 GLY 148 163 163 GLY GLY A . n A 1 149 ASP 149 164 164 ASP ASP A . n A 1 150 GLY 150 165 165 GLY GLY A . n A 1 151 LEU 151 166 166 LEU LEU A . n A 1 152 TYR 152 167 167 TYR TYR A . n A 1 153 GLU 153 168 168 GLU GLU A . n A 1 154 GLY 154 169 169 GLY GLY A . n A 1 155 LEU 155 170 170 LEU LEU A . n A 1 156 ASP 156 171 171 ASP ASP A . n A 1 157 TRP 157 172 172 TRP TRP A . n A 1 158 LEU 158 173 173 LEU LEU A . n A 1 159 SER 159 174 174 SER SER A . n A 1 160 ASN 160 175 175 ASN ASN A . n A 1 161 GLN 161 176 176 GLN GLN A . n A 1 162 LEU 162 177 177 LEU LEU A . n A 1 163 ARG 163 178 178 ARG ARG A . n A 1 164 ASN 164 179 179 ASN ASN A . n A 1 165 GLN 165 180 180 GLN GLN A . n A 1 166 LYS 166 181 181 LYS LYS A . n B 1 1 GLY 1 16 16 GLY GLY B . n B 1 2 SER 2 17 17 SER SER B . n B 1 3 MET 3 18 18 MET MET B . n B 1 4 ARG 4 19 19 ARG ARG B . n B 1 5 ILE 5 20 20 ILE ILE B . n B 1 6 LEU 6 21 21 LEU LEU B . n B 1 7 MET 7 22 22 MET MET B . n B 1 8 VAL 8 23 23 VAL VAL B . n B 1 9 GLY 9 24 24 GLY GLY B . n B 1 10 LEU 10 25 25 LEU LEU B . n B 1 11 ASP 11 26 26 ASP ASP B . n B 1 12 ALA 12 27 27 ALA ALA B . n B 1 13 ALA 13 28 28 ALA ALA B . n B 1 14 GLY 14 29 29 GLY GLY B . n B 1 15 LYS 15 30 30 LYS LYS B . n B 1 16 THR 16 31 31 THR THR B . n B 1 17 THR 17 32 32 THR THR B . n B 1 18 ILE 18 33 33 ILE ILE B . n B 1 19 LEU 19 34 34 LEU LEU B . n B 1 20 TYR 20 35 35 TYR TYR B . n B 1 21 LYS 21 36 36 LYS LYS B . n B 1 22 LEU 22 37 37 LEU LEU B . n B 1 23 LYS 23 38 38 LYS LYS B . n B 1 24 LEU 24 39 39 LEU LEU B . n B 1 25 GLY 25 40 40 GLY GLY B . n B 1 26 GLU 26 41 41 GLU GLU B . n B 1 27 ILE 27 42 42 ILE ILE B . n B 1 28 VAL 28 43 43 VAL VAL B . n B 1 29 THR 29 44 44 THR THR B . n B 1 30 THR 30 45 45 THR THR B . n B 1 31 ILE 31 46 46 ILE ILE B . n B 1 32 PRO 32 47 47 PRO PRO B . n B 1 33 THR 33 48 48 THR THR B . n B 1 34 ILE 34 49 49 ILE ILE B . n B 1 35 GLY 35 50 50 GLY GLY B . n B 1 36 PHE 36 51 51 PHE PHE B . n B 1 37 ASN 37 52 52 ASN ASN B . n B 1 38 VAL 38 53 53 VAL VAL B . n B 1 39 GLU 39 54 54 GLU GLU B . n B 1 40 THR 40 55 55 THR THR B . n B 1 41 VAL 41 56 56 VAL VAL B . n B 1 42 GLU 42 57 57 GLU GLU B . n B 1 43 TYR 43 58 58 TYR TYR B . n B 1 44 LYS 44 59 59 LYS LYS B . n B 1 45 ASN 45 60 60 ASN ASN B . n B 1 46 ILE 46 61 61 ILE ILE B . n B 1 47 SER 47 62 62 SER SER B . n B 1 48 PHE 48 63 63 PHE PHE B . n B 1 49 THR 49 64 64 THR THR B . n B 1 50 VAL 50 65 65 VAL VAL B . n B 1 51 TRP 51 66 66 TRP TRP B . n B 1 52 ASP 52 67 67 ASP ASP B . n B 1 53 VAL 53 68 68 VAL VAL B . n B 1 54 GLY 54 69 69 GLY GLY B . n B 1 55 GLY 55 70 70 GLY GLY B . n B 1 56 LEU 56 71 71 LEU LEU B . n B 1 57 ASP 57 72 72 ASP ASP B . n B 1 58 LYS 58 73 73 LYS LYS B . n B 1 59 ILE 59 74 74 ILE ILE B . n B 1 60 ARG 60 75 75 ARG ARG B . n B 1 61 PRO 61 76 76 PRO PRO B . n B 1 62 LEU 62 77 77 LEU LEU B . n B 1 63 TRP 63 78 78 TRP TRP B . n B 1 64 ARG 64 79 79 ARG ARG B . n B 1 65 HIS 65 80 80 HIS HIS B . n B 1 66 TYR 66 81 81 TYR TYR B . n B 1 67 PHE 67 82 82 PHE PHE B . n B 1 68 GLN 68 83 83 GLN GLN B . n B 1 69 ASN 69 84 84 ASN ASN B . n B 1 70 THR 70 85 85 THR THR B . n B 1 71 GLN 71 86 86 GLN GLN B . n B 1 72 GLY 72 87 87 GLY GLY B . n B 1 73 LEU 73 88 88 LEU LEU B . n B 1 74 ILE 74 89 89 ILE ILE B . n B 1 75 PHE 75 90 90 PHE PHE B . n B 1 76 VAL 76 91 91 VAL VAL B . n B 1 77 VAL 77 92 92 VAL VAL B . n B 1 78 ASP 78 93 93 ASP ASP B . n B 1 79 SER 79 94 94 SER SER B . n B 1 80 ASN 80 95 95 ASN ASN B . n B 1 81 ASP 81 96 96 ASP ASP B . n B 1 82 ARG 82 97 97 ARG ARG B . n B 1 83 GLU 83 98 98 GLU GLU B . n B 1 84 ARG 84 99 99 ARG ARG B . n B 1 85 VAL 85 100 100 VAL VAL B . n B 1 86 ASN 86 101 101 ASN ASN B . n B 1 87 GLU 87 102 102 GLU GLU B . n B 1 88 ALA 88 103 103 ALA ALA B . n B 1 89 ARG 89 104 104 ARG ARG B . n B 1 90 GLU 90 105 105 GLU GLU B . n B 1 91 GLU 91 106 106 GLU GLU B . n B 1 92 LEU 92 107 107 LEU LEU B . n B 1 93 MET 93 108 108 MET MET B . n B 1 94 ARG 94 109 109 ARG ARG B . n B 1 95 MET 95 110 110 MET MET B . n B 1 96 LEU 96 111 111 LEU LEU B . n B 1 97 ALA 97 112 112 ALA ALA B . n B 1 98 GLU 98 113 113 GLU GLU B . n B 1 99 ASP 99 114 114 ASP ASP B . n B 1 100 GLU 100 115 115 GLU GLU B . n B 1 101 LEU 101 116 116 LEU LEU B . n B 1 102 ARG 102 117 117 ARG ARG B . n B 1 103 ASP 103 118 118 ASP ASP B . n B 1 104 ALA 104 119 119 ALA ALA B . n B 1 105 VAL 105 120 120 VAL VAL B . n B 1 106 LEU 106 121 121 LEU LEU B . n B 1 107 LEU 107 122 122 LEU LEU B . n B 1 108 VAL 108 123 123 VAL VAL B . n B 1 109 PHE 109 124 124 PHE PHE B . n B 1 110 ALA 110 125 125 ALA ALA B . n B 1 111 ASN 111 126 126 ASN ASN B . n B 1 112 LYS 112 127 127 LYS LYS B . n B 1 113 GLN 113 128 128 GLN GLN B . n B 1 114 ASP 114 129 129 ASP ASP B . n B 1 115 LEU 115 130 130 LEU LEU B . n B 1 116 PRO 116 131 131 PRO PRO B . n B 1 117 ASN 117 132 132 ASN ASN B . n B 1 118 ALA 118 133 133 ALA ALA B . n B 1 119 MET 119 134 134 MET MET B . n B 1 120 ASN 120 135 135 ASN ASN B . n B 1 121 ALA 121 136 136 ALA ALA B . n B 1 122 ALA 122 137 137 ALA ALA B . n B 1 123 GLU 123 138 138 GLU GLU B . n B 1 124 ILE 124 139 139 ILE ILE B . n B 1 125 THR 125 140 140 THR THR B . n B 1 126 ASP 126 141 141 ASP ASP B . n B 1 127 LYS 127 142 142 LYS LYS B . n B 1 128 LEU 128 143 143 LEU LEU B . n B 1 129 GLY 129 144 144 GLY GLY B . n B 1 130 LEU 130 145 145 LEU LEU B . n B 1 131 HIS 131 146 146 HIS HIS B . n B 1 132 SER 132 147 147 SER SER B . n B 1 133 LEU 133 148 148 LEU LEU B . n B 1 134 ARG 134 149 149 ARG ARG B . n B 1 135 HIS 135 150 150 HIS HIS B . n B 1 136 ARG 136 151 151 ARG ARG B . n B 1 137 ASN 137 152 152 ASN ASN B . n B 1 138 TRP 138 153 153 TRP TRP B . n B 1 139 TYR 139 154 154 TYR TYR B . n B 1 140 ILE 140 155 155 ILE ILE B . n B 1 141 GLN 141 156 156 GLN GLN B . n B 1 142 ALA 142 157 157 ALA ALA B . n B 1 143 THR 143 158 158 THR THR B . n B 1 144 CYS 144 159 159 CYS CYS B . n B 1 145 ALA 145 160 160 ALA ALA B . n B 1 146 THR 146 161 161 THR THR B . n B 1 147 SER 147 162 162 SER SER B . n B 1 148 GLY 148 163 163 GLY GLY B . n B 1 149 ASP 149 164 164 ASP ASP B . n B 1 150 GLY 150 165 165 GLY GLY B . n B 1 151 LEU 151 166 166 LEU LEU B . n B 1 152 TYR 152 167 167 TYR TYR B . n B 1 153 GLU 153 168 168 GLU GLU B . n B 1 154 GLY 154 169 169 GLY GLY B . n B 1 155 LEU 155 170 170 LEU LEU B . n B 1 156 ASP 156 171 171 ASP ASP B . n B 1 157 TRP 157 172 172 TRP TRP B . n B 1 158 LEU 158 173 173 LEU LEU B . n B 1 159 SER 159 174 174 SER SER B . n B 1 160 ASN 160 175 175 ASN ASN B . n B 1 161 GLN 161 176 176 GLN GLN B . n B 1 162 LEU 162 177 177 LEU LEU B . n B 1 163 ARG 163 178 178 ARG ARG B . n B 1 164 ASN 164 179 179 ASN ASN B . n B 1 165 GLN 165 180 180 GLN GLN B . n B 1 166 LYS 166 181 181 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 1002 2 MG MG A . D 3 GTP 1 1001 1 GTP GTP A . E 2 MG 1 1002 2 MG MG B . F 3 GTP 1 1001 1 GTP GTP B . G 4 HOH 1 1 1 HOH HOH ? . G 4 HOH 2 2 2 HOH HOH ? . G 4 HOH 3 3 3 HOH HOH ? . G 4 HOH 4 4 4 HOH HOH ? . G 4 HOH 5 5 5 HOH HOH ? . G 4 HOH 6 6 6 HOH HOH ? . G 4 HOH 7 7 7 HOH HOH ? . G 4 HOH 8 8 8 HOH HOH ? . G 4 HOH 9 9 9 HOH HOH ? . G 4 HOH 10 10 10 HOH HOH ? . G 4 HOH 11 11 11 HOH HOH ? . G 4 HOH 12 12 12 HOH HOH ? . G 4 HOH 13 13 13 HOH HOH ? . G 4 HOH 14 14 14 HOH HOH ? . G 4 HOH 15 15 15 HOH HOH ? . G 4 HOH 16 16 16 HOH HOH ? . G 4 HOH 17 17 17 HOH HOH ? . G 4 HOH 18 18 18 HOH HOH ? . G 4 HOH 19 19 19 HOH HOH ? . G 4 HOH 20 20 20 HOH HOH ? . G 4 HOH 21 21 21 HOH HOH ? . G 4 HOH 22 22 22 HOH HOH ? . G 4 HOH 23 23 23 HOH HOH ? . G 4 HOH 24 24 24 HOH HOH ? . G 4 HOH 25 25 25 HOH HOH ? . G 4 HOH 26 26 26 HOH HOH ? . G 4 HOH 27 27 27 HOH HOH ? . G 4 HOH 28 28 28 HOH HOH ? . G 4 HOH 29 29 29 HOH HOH ? . G 4 HOH 30 30 30 HOH HOH ? . G 4 HOH 31 31 31 HOH HOH ? . G 4 HOH 32 32 32 HOH HOH ? . G 4 HOH 33 33 33 HOH HOH ? . G 4 HOH 34 34 34 HOH HOH ? . G 4 HOH 35 35 35 HOH HOH ? . G 4 HOH 36 36 36 HOH HOH ? . G 4 HOH 37 37 37 HOH HOH ? . G 4 HOH 38 38 38 HOH HOH ? . G 4 HOH 39 39 39 HOH HOH ? . G 4 HOH 40 40 40 HOH HOH ? . G 4 HOH 41 41 41 HOH HOH ? . G 4 HOH 42 42 42 HOH HOH ? . G 4 HOH 43 43 43 HOH HOH ? . G 4 HOH 44 44 44 HOH HOH ? . G 4 HOH 45 45 45 HOH HOH ? . G 4 HOH 46 46 46 HOH HOH ? . G 4 HOH 47 47 47 HOH HOH ? . G 4 HOH 48 48 48 HOH HOH ? . G 4 HOH 49 49 49 HOH HOH ? . G 4 HOH 50 50 50 HOH HOH ? . G 4 HOH 51 51 51 HOH HOH ? . G 4 HOH 52 52 52 HOH HOH ? . G 4 HOH 53 53 53 HOH HOH ? . G 4 HOH 54 54 54 HOH HOH ? . G 4 HOH 55 55 55 HOH HOH ? . G 4 HOH 56 56 56 HOH HOH ? . G 4 HOH 57 57 57 HOH HOH ? . G 4 HOH 58 58 58 HOH HOH ? . G 4 HOH 59 59 59 HOH HOH ? . G 4 HOH 60 60 60 HOH HOH ? . G 4 HOH 61 61 61 HOH HOH ? . G 4 HOH 62 62 62 HOH HOH ? . G 4 HOH 63 63 63 HOH HOH ? . G 4 HOH 64 64 64 HOH HOH ? . G 4 HOH 65 65 65 HOH HOH ? . G 4 HOH 66 66 66 HOH HOH ? . G 4 HOH 67 67 67 HOH HOH ? . G 4 HOH 68 68 68 HOH HOH ? . G 4 HOH 69 69 69 HOH HOH ? . G 4 HOH 70 70 70 HOH HOH ? . G 4 HOH 71 71 71 HOH HOH ? . G 4 HOH 72 72 72 HOH HOH ? . G 4 HOH 73 73 73 HOH HOH ? . G 4 HOH 74 74 74 HOH HOH ? . G 4 HOH 75 75 75 HOH HOH ? . G 4 HOH 76 76 76 HOH HOH ? . G 4 HOH 77 77 77 HOH HOH ? . G 4 HOH 78 78 78 HOH HOH ? . G 4 HOH 79 79 79 HOH HOH ? . G 4 HOH 80 80 80 HOH HOH ? . G 4 HOH 81 81 81 HOH HOH ? . G 4 HOH 82 82 82 HOH HOH ? . G 4 HOH 83 83 83 HOH HOH ? . G 4 HOH 84 84 84 HOH HOH ? . G 4 HOH 85 85 85 HOH HOH ? . G 4 HOH 86 86 86 HOH HOH ? . G 4 HOH 87 87 87 HOH HOH ? . G 4 HOH 88 88 88 HOH HOH ? . G 4 HOH 89 89 89 HOH HOH ? . G 4 HOH 90 90 90 HOH HOH ? . G 4 HOH 91 91 91 HOH HOH ? . G 4 HOH 92 92 92 HOH HOH ? . G 4 HOH 93 93 93 HOH HOH ? . G 4 HOH 94 94 94 HOH HOH ? . G 4 HOH 95 95 95 HOH HOH ? . G 4 HOH 96 96 96 HOH HOH ? . G 4 HOH 97 97 97 HOH HOH ? . G 4 HOH 98 98 98 HOH HOH ? . G 4 HOH 99 99 99 HOH HOH ? . G 4 HOH 100 100 100 HOH HOH ? . G 4 HOH 101 101 101 HOH HOH ? . G 4 HOH 102 102 102 HOH HOH ? . G 4 HOH 103 103 103 HOH HOH ? . G 4 HOH 104 104 104 HOH HOH ? . G 4 HOH 105 105 105 HOH HOH ? . G 4 HOH 106 106 106 HOH HOH ? . G 4 HOH 107 107 107 HOH HOH ? . G 4 HOH 108 108 108 HOH HOH ? . G 4 HOH 109 109 109 HOH HOH ? . G 4 HOH 110 110 110 HOH HOH ? . G 4 HOH 111 111 111 HOH HOH ? . G 4 HOH 112 112 112 HOH HOH ? . G 4 HOH 113 113 113 HOH HOH ? . G 4 HOH 114 114 114 HOH HOH ? . G 4 HOH 115 115 115 HOH HOH ? . G 4 HOH 116 116 116 HOH HOH ? . G 4 HOH 117 117 117 HOH HOH ? . G 4 HOH 118 118 118 HOH HOH ? . G 4 HOH 119 119 119 HOH HOH ? . G 4 HOH 120 120 120 HOH HOH ? . G 4 HOH 121 121 121 HOH HOH ? . G 4 HOH 122 122 122 HOH HOH ? . G 4 HOH 123 123 123 HOH HOH ? . G 4 HOH 124 124 124 HOH HOH ? . G 4 HOH 125 125 125 HOH HOH ? . G 4 HOH 126 126 126 HOH HOH ? . G 4 HOH 127 127 127 HOH HOH ? . G 4 HOH 128 128 128 HOH HOH ? . G 4 HOH 129 129 129 HOH HOH ? . G 4 HOH 130 130 130 HOH HOH ? . G 4 HOH 131 131 131 HOH HOH ? . G 4 HOH 132 132 132 HOH HOH ? . G 4 HOH 133 133 133 HOH HOH ? . G 4 HOH 134 134 134 HOH HOH ? . G 4 HOH 135 135 135 HOH HOH ? . G 4 HOH 136 136 136 HOH HOH ? . G 4 HOH 137 137 137 HOH HOH ? . G 4 HOH 138 138 138 HOH HOH ? . G 4 HOH 139 139 139 HOH HOH ? . G 4 HOH 140 140 140 HOH HOH ? . G 4 HOH 141 141 141 HOH HOH ? . G 4 HOH 142 142 142 HOH HOH ? . G 4 HOH 143 143 143 HOH HOH ? . G 4 HOH 144 144 144 HOH HOH ? . G 4 HOH 145 145 145 HOH HOH ? . G 4 HOH 146 146 146 HOH HOH ? . G 4 HOH 147 147 147 HOH HOH ? . G 4 HOH 148 148 148 HOH HOH ? . G 4 HOH 149 149 149 HOH HOH ? . G 4 HOH 150 150 150 HOH HOH ? . G 4 HOH 151 151 151 HOH HOH ? . G 4 HOH 152 152 152 HOH HOH ? . G 4 HOH 153 153 153 HOH HOH ? . G 4 HOH 154 154 154 HOH HOH ? . G 4 HOH 155 155 155 HOH HOH ? . G 4 HOH 156 156 156 HOH HOH ? . G 4 HOH 157 157 157 HOH HOH ? . G 4 HOH 158 158 158 HOH HOH ? . G 4 HOH 159 159 159 HOH HOH ? . G 4 HOH 160 160 160 HOH HOH ? . G 4 HOH 161 161 161 HOH HOH ? . G 4 HOH 162 162 162 HOH HOH ? . G 4 HOH 163 163 163 HOH HOH ? . G 4 HOH 164 164 164 HOH HOH ? . G 4 HOH 165 165 165 HOH HOH ? . G 4 HOH 166 166 166 HOH HOH ? . G 4 HOH 167 167 167 HOH HOH ? . G 4 HOH 168 168 168 HOH HOH ? . G 4 HOH 169 169 169 HOH HOH ? . G 4 HOH 170 170 170 HOH HOH ? . G 4 HOH 171 171 171 HOH HOH ? . G 4 HOH 172 172 172 HOH HOH ? . G 4 HOH 173 173 173 HOH HOH ? . G 4 HOH 174 174 174 HOH HOH ? . G 4 HOH 175 175 175 HOH HOH ? . G 4 HOH 176 176 176 HOH HOH ? . G 4 HOH 177 177 177 HOH HOH ? . G 4 HOH 178 178 178 HOH HOH ? . G 4 HOH 179 179 179 HOH HOH ? . G 4 HOH 180 180 180 HOH HOH ? . G 4 HOH 181 181 181 HOH HOH ? . G 4 HOH 182 182 182 HOH HOH ? . G 4 HOH 183 183 183 HOH HOH ? . G 4 HOH 184 184 184 HOH HOH ? . G 4 HOH 185 185 185 HOH HOH ? . G 4 HOH 186 186 186 HOH HOH ? . G 4 HOH 187 187 187 HOH HOH ? . G 4 HOH 188 188 188 HOH HOH ? . G 4 HOH 189 189 189 HOH HOH ? . G 4 HOH 190 190 190 HOH HOH ? . G 4 HOH 191 191 191 HOH HOH ? . G 4 HOH 192 192 192 HOH HOH ? . G 4 HOH 193 193 193 HOH HOH ? . G 4 HOH 194 194 194 HOH HOH ? . G 4 HOH 195 195 195 HOH HOH ? . G 4 HOH 196 196 196 HOH HOH ? . G 4 HOH 197 197 197 HOH HOH ? . G 4 HOH 198 198 198 HOH HOH ? . G 4 HOH 199 199 199 HOH HOH ? . G 4 HOH 200 200 200 HOH HOH ? . G 4 HOH 201 201 201 HOH HOH ? . G 4 HOH 202 202 202 HOH HOH ? . G 4 HOH 203 203 203 HOH HOH ? . G 4 HOH 204 204 204 HOH HOH ? . G 4 HOH 205 205 205 HOH HOH ? . G 4 HOH 206 206 206 HOH HOH ? . G 4 HOH 207 207 207 HOH HOH ? . G 4 HOH 208 208 208 HOH HOH ? . G 4 HOH 209 209 209 HOH HOH ? . G 4 HOH 210 210 210 HOH HOH ? . G 4 HOH 211 211 211 HOH HOH ? . G 4 HOH 212 212 212 HOH HOH ? . G 4 HOH 213 213 213 HOH HOH ? . G 4 HOH 214 214 214 HOH HOH ? . G 4 HOH 215 215 215 HOH HOH ? . G 4 HOH 216 216 216 HOH HOH ? . G 4 HOH 217 217 217 HOH HOH ? . G 4 HOH 218 218 218 HOH HOH ? . G 4 HOH 219 219 219 HOH HOH ? . G 4 HOH 220 220 220 HOH HOH ? . G 4 HOH 221 221 221 HOH HOH ? . G 4 HOH 222 222 222 HOH HOH ? . G 4 HOH 223 223 223 HOH HOH ? . G 4 HOH 224 224 224 HOH HOH ? . G 4 HOH 225 225 225 HOH HOH ? . G 4 HOH 226 226 226 HOH HOH ? . G 4 HOH 227 227 227 HOH HOH ? . G 4 HOH 228 228 228 HOH HOH ? . G 4 HOH 229 229 229 HOH HOH ? . G 4 HOH 230 230 230 HOH HOH ? . G 4 HOH 231 231 231 HOH HOH ? . G 4 HOH 232 232 232 HOH HOH ? . G 4 HOH 233 233 233 HOH HOH ? . G 4 HOH 234 234 234 HOH HOH ? . G 4 HOH 235 235 235 HOH HOH ? . G 4 HOH 236 236 236 HOH HOH ? . G 4 HOH 237 237 237 HOH HOH ? . G 4 HOH 238 238 238 HOH HOH ? . G 4 HOH 239 239 239 HOH HOH ? . G 4 HOH 240 240 240 HOH HOH ? . G 4 HOH 241 241 241 HOH HOH ? . G 4 HOH 242 242 242 HOH HOH ? . G 4 HOH 243 243 243 HOH HOH ? . G 4 HOH 244 244 244 HOH HOH ? . G 4 HOH 245 245 245 HOH HOH ? . G 4 HOH 246 246 246 HOH HOH ? . G 4 HOH 247 247 247 HOH HOH ? . G 4 HOH 248 248 248 HOH HOH ? . G 4 HOH 249 249 249 HOH HOH ? . G 4 HOH 250 250 250 HOH HOH ? . G 4 HOH 251 251 251 HOH HOH ? . G 4 HOH 252 252 252 HOH HOH ? . G 4 HOH 253 253 253 HOH HOH ? . G 4 HOH 254 254 254 HOH HOH ? . G 4 HOH 255 255 255 HOH HOH ? . G 4 HOH 256 256 256 HOH HOH ? . G 4 HOH 257 257 257 HOH HOH ? . G 4 HOH 258 258 258 HOH HOH ? . G 4 HOH 259 259 259 HOH HOH ? . G 4 HOH 260 260 260 HOH HOH ? . G 4 HOH 261 261 261 HOH HOH ? . G 4 HOH 262 262 262 HOH HOH ? . G 4 HOH 263 263 263 HOH HOH ? . G 4 HOH 264 264 264 HOH HOH ? . G 4 HOH 265 265 265 HOH HOH ? . G 4 HOH 266 266 266 HOH HOH ? . G 4 HOH 267 267 267 HOH HOH ? . G 4 HOH 268 268 268 HOH HOH ? . G 4 HOH 269 269 269 HOH HOH ? . G 4 HOH 270 270 270 HOH HOH ? . G 4 HOH 271 271 271 HOH HOH ? . G 4 HOH 272 272 272 HOH HOH ? . G 4 HOH 273 273 273 HOH HOH ? . G 4 HOH 274 274 274 HOH HOH ? . G 4 HOH 275 275 275 HOH HOH ? . G 4 HOH 276 276 276 HOH HOH ? . G 4 HOH 277 277 277 HOH HOH ? . G 4 HOH 278 278 278 HOH HOH ? . G 4 HOH 279 279 279 HOH HOH ? . G 4 HOH 280 280 280 HOH HOH ? . G 4 HOH 281 281 281 HOH HOH ? . G 4 HOH 282 282 282 HOH HOH ? . G 4 HOH 283 283 283 HOH HOH ? . G 4 HOH 284 284 284 HOH HOH ? . G 4 HOH 285 285 285 HOH HOH ? . G 4 HOH 286 286 286 HOH HOH ? . G 4 HOH 287 287 287 HOH HOH ? . G 4 HOH 288 288 288 HOH HOH ? . G 4 HOH 289 289 289 HOH HOH ? . G 4 HOH 290 290 290 HOH HOH ? . G 4 HOH 291 291 291 HOH HOH ? . G 4 HOH 292 292 292 HOH HOH ? . G 4 HOH 293 293 293 HOH HOH ? . G 4 HOH 294 294 294 HOH HOH ? . G 4 HOH 295 295 295 HOH HOH ? . G 4 HOH 296 296 296 HOH HOH ? . G 4 HOH 297 297 297 HOH HOH ? . G 4 HOH 298 298 298 HOH HOH ? . G 4 HOH 299 299 299 HOH HOH ? . G 4 HOH 300 300 300 HOH HOH ? . G 4 HOH 301 301 301 HOH HOH ? . G 4 HOH 302 302 302 HOH HOH ? . G 4 HOH 303 303 303 HOH HOH ? . G 4 HOH 304 304 304 HOH HOH ? . G 4 HOH 305 305 305 HOH HOH ? . G 4 HOH 306 306 306 HOH HOH ? . G 4 HOH 307 307 307 HOH HOH ? . G 4 HOH 308 308 308 HOH HOH ? . G 4 HOH 309 309 309 HOH HOH ? . G 4 HOH 310 310 310 HOH HOH ? . G 4 HOH 311 311 311 HOH HOH ? . G 4 HOH 312 312 312 HOH HOH ? . G 4 HOH 313 313 313 HOH HOH ? . G 4 HOH 314 314 314 HOH HOH ? . G 4 HOH 315 315 315 HOH HOH ? . G 4 HOH 316 316 316 HOH HOH ? . G 4 HOH 317 317 317 HOH HOH ? . G 4 HOH 318 318 318 HOH HOH ? . G 4 HOH 319 319 319 HOH HOH ? . G 4 HOH 320 320 320 HOH HOH ? . G 4 HOH 321 321 321 HOH HOH ? . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2B ? D GTP . ? A GTP 1001 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O2G ? D GTP . ? A GTP 1001 ? 1_555 93.2 ? 2 O2B ? D GTP . ? A GTP 1001 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 OG1 ? A THR 16 ? A THR 31 ? 1_555 88.9 ? 3 O2G ? D GTP . ? A GTP 1001 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 OG1 ? A THR 16 ? A THR 31 ? 1_555 175.3 ? 4 O2B ? D GTP . ? A GTP 1001 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 OG1 ? A THR 33 ? A THR 48 ? 1_555 173.7 ? 5 O2G ? D GTP . ? A GTP 1001 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 OG1 ? A THR 33 ? A THR 48 ? 1_555 84.8 ? 6 OG1 ? A THR 16 ? A THR 31 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 OG1 ? A THR 33 ? A THR 48 ? 1_555 92.7 ? 7 O2B ? F GTP . ? B GTP 1001 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O2G ? F GTP . ? B GTP 1001 ? 1_555 89.1 ? 8 O2B ? F GTP . ? B GTP 1001 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 OG1 ? B THR 16 ? B THR 31 ? 1_555 87.2 ? 9 O2G ? F GTP . ? B GTP 1001 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 OG1 ? B THR 16 ? B THR 31 ? 1_555 175.3 ? 10 O2B ? F GTP . ? B GTP 1001 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 OG1 ? B THR 33 ? B THR 48 ? 1_555 176.2 ? 11 O2G ? F GTP . ? B GTP 1001 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 OG1 ? B THR 33 ? B THR 48 ? 1_555 87.3 ? 12 OG1 ? B THR 16 ? B THR 31 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 OG1 ? B THR 33 ? B THR 48 ? 1_555 96.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-05-06 2 'Structure model' 1 1 2003-05-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _software.name REFMAC _software.classification refinement _software.version 5.0 _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ILE 49 ? ? O . HOH 52 ? ? 2.12 2 1 O . HOH 222 ? ? O . HOH 321 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O . HOH 203 ? ? 1_555 O . HOH 203 ? ? 2_556 0.43 2 1 O . HOH 206 ? ? 1_555 O . HOH 206 ? ? 2_556 0.45 3 1 O . HOH 69 ? ? 1_555 O . HOH 69 ? ? 2_555 0.57 4 1 O . HOH 109 ? ? 1_555 O . HOH 109 ? ? 2_556 0.71 5 1 O . HOH 108 ? ? 1_555 O . HOH 108 ? ? 2_556 0.76 6 1 O . HOH 34 ? ? 1_555 O . HOH 34 ? ? 2_555 0.88 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 127 ? ? 71.64 32.63 2 1 GLN B 180 ? ? 178.96 166.07 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A GTP 1001 ? "O5'" ? D GTP 1 "O5'" 2 1 N 1 A GTP 1001 ? "C5'" ? D GTP 1 "C5'" 3 1 N 1 A GTP 1001 ? "C4'" ? D GTP 1 "C4'" 4 1 N 1 A GTP 1001 ? "O4'" ? D GTP 1 "O4'" 5 1 N 1 A GTP 1001 ? "C3'" ? D GTP 1 "C3'" 6 1 N 1 A GTP 1001 ? "O3'" ? D GTP 1 "O3'" 7 1 N 1 A GTP 1001 ? "C2'" ? D GTP 1 "C2'" 8 1 N 1 A GTP 1001 ? "O2'" ? D GTP 1 "O2'" 9 1 N 1 A GTP 1001 ? "C1'" ? D GTP 1 "C1'" 10 1 N 1 B GTP 1001 ? "O5'" ? F GTP 1 "O5'" 11 1 N 1 B GTP 1001 ? "C5'" ? F GTP 1 "C5'" 12 1 N 1 B GTP 1001 ? "C4'" ? F GTP 1 "C4'" 13 1 N 1 B GTP 1001 ? "O4'" ? F GTP 1 "O4'" 14 1 N 1 B GTP 1001 ? "C3'" ? F GTP 1 "C3'" 15 1 N 1 B GTP 1001 ? "O3'" ? F GTP 1 "O3'" 16 1 N 1 B GTP 1001 ? "C2'" ? F GTP 1 "C2'" 17 1 N 1 B GTP 1001 ? "O2'" ? F GTP 1 "O2'" 18 1 N 1 B GTP 1001 ? "C1'" ? F GTP 1 "C1'" # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-TRIPHOSPHATE" GTP 4 water HOH #