data_1J3M # _entry.id 1J3M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1J3M pdb_00001j3m 10.2210/pdb1j3m/pdb RCSB RCSB005588 ? ? WWPDB D_1000005588 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-05-18 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1J3M _pdbx_database_status.recvd_initial_deposition_date 2003-02-05 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ttk003001751.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kishishita, S.' 1 'Terada, T.' 2 'Shirouzu, M.' 3 'Kuramitsu, S.' 4 'Park, S.-Y.' 5 'Tame, R.H.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Crystal structure of a conserved hypothetical protein TT1751 from Thermus thermophilus HB8' _citation.journal_abbrev Proteins _citation.journal_volume 57 _citation.page_first 883 _citation.page_last 887 _citation.year 2004 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15481054 _citation.pdbx_database_id_DOI 10.1002/prot.20282 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kishishita, S.' 1 ? primary 'Tatsuguchi, A.' 2 ? primary 'Ushikoshi-Nakayama, R.' 3 ? primary 'Terada, T.' 4 ? primary 'Kuramitsu, S.' 5 ? primary 'Park, S.-Y.' 6 ? primary 'Tame, J.R.' 7 ? primary 'Shirouzu, M.' 8 ? primary 'Yokoyama, S.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'the conserved hypothetical protein TT1751' 13973.396 2 ? ? ? ? 2 non-polymer syn 'SULFITE ION' 80.063 1 ? ? ? ? 3 water nat water 18.015 112 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTGMRKTLKATLAEARAQVEAALKEEGFGILTEIDVAATLKAKLGLEKPPYLILGACNPNLAARALEALPEIGLLLPCNV VLREAEEGVEVLIQDPKEMFRVLPEATQRALAPVAEEARTRLSRALSRL ; _entity_poly.pdbx_seq_one_letter_code_can ;MTGMRKTLKATLAEARAQVEAALKEEGFGILTEIDVAATLKAKLGLEKPPYLILGACNPNLAARALEALPEIGLLLPCNV VLREAEEGVEVLIQDPKEMFRVLPEATQRALAPVAEEARTRLSRALSRL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ttk003001751.1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFITE ION' SO3 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLY n 1 4 MET n 1 5 ARG n 1 6 LYS n 1 7 THR n 1 8 LEU n 1 9 LYS n 1 10 ALA n 1 11 THR n 1 12 LEU n 1 13 ALA n 1 14 GLU n 1 15 ALA n 1 16 ARG n 1 17 ALA n 1 18 GLN n 1 19 VAL n 1 20 GLU n 1 21 ALA n 1 22 ALA n 1 23 LEU n 1 24 LYS n 1 25 GLU n 1 26 GLU n 1 27 GLY n 1 28 PHE n 1 29 GLY n 1 30 ILE n 1 31 LEU n 1 32 THR n 1 33 GLU n 1 34 ILE n 1 35 ASP n 1 36 VAL n 1 37 ALA n 1 38 ALA n 1 39 THR n 1 40 LEU n 1 41 LYS n 1 42 ALA n 1 43 LYS n 1 44 LEU n 1 45 GLY n 1 46 LEU n 1 47 GLU n 1 48 LYS n 1 49 PRO n 1 50 PRO n 1 51 TYR n 1 52 LEU n 1 53 ILE n 1 54 LEU n 1 55 GLY n 1 56 ALA n 1 57 CYS n 1 58 ASN n 1 59 PRO n 1 60 ASN n 1 61 LEU n 1 62 ALA n 1 63 ALA n 1 64 ARG n 1 65 ALA n 1 66 LEU n 1 67 GLU n 1 68 ALA n 1 69 LEU n 1 70 PRO n 1 71 GLU n 1 72 ILE n 1 73 GLY n 1 74 LEU n 1 75 LEU n 1 76 LEU n 1 77 PRO n 1 78 CYS n 1 79 ASN n 1 80 VAL n 1 81 VAL n 1 82 LEU n 1 83 ARG n 1 84 GLU n 1 85 ALA n 1 86 GLU n 1 87 GLU n 1 88 GLY n 1 89 VAL n 1 90 GLU n 1 91 VAL n 1 92 LEU n 1 93 ILE n 1 94 GLN n 1 95 ASP n 1 96 PRO n 1 97 LYS n 1 98 GLU n 1 99 MET n 1 100 PHE n 1 101 ARG n 1 102 VAL n 1 103 LEU n 1 104 PRO n 1 105 GLU n 1 106 ALA n 1 107 THR n 1 108 GLN n 1 109 ARG n 1 110 ALA n 1 111 LEU n 1 112 ALA n 1 113 PRO n 1 114 VAL n 1 115 ALA n 1 116 GLU n 1 117 GLU n 1 118 ALA n 1 119 ARG n 1 120 THR n 1 121 ARG n 1 122 LEU n 1 123 SER n 1 124 ARG n 1 125 ALA n 1 126 LEU n 1 127 SER n 1 128 ARG n 1 129 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO3 non-polymer . 'SULFITE ION' ? 'O3 S -2' 80.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 CYS 78 78 78 CYS CYS A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 MET 99 99 99 MET MET A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 LEU 129 129 129 LEU LEU A . n B 1 1 MET 1 201 ? ? ? B . n B 1 2 THR 2 202 ? ? ? B . n B 1 3 GLY 3 203 203 GLY GLY B . n B 1 4 MET 4 204 204 MET MET B . n B 1 5 ARG 5 205 205 ARG ARG B . n B 1 6 LYS 6 206 206 LYS LYS B . n B 1 7 THR 7 207 207 THR THR B . n B 1 8 LEU 8 208 208 LEU LEU B . n B 1 9 LYS 9 209 209 LYS LYS B . n B 1 10 ALA 10 210 210 ALA ALA B . n B 1 11 THR 11 211 211 THR THR B . n B 1 12 LEU 12 212 212 LEU LEU B . n B 1 13 ALA 13 213 213 ALA ALA B . n B 1 14 GLU 14 214 214 GLU GLU B . n B 1 15 ALA 15 215 215 ALA ALA B . n B 1 16 ARG 16 216 216 ARG ARG B . n B 1 17 ALA 17 217 217 ALA ALA B . n B 1 18 GLN 18 218 218 GLN GLN B . n B 1 19 VAL 19 219 219 VAL VAL B . n B 1 20 GLU 20 220 220 GLU GLU B . n B 1 21 ALA 21 221 221 ALA ALA B . n B 1 22 ALA 22 222 222 ALA ALA B . n B 1 23 LEU 23 223 223 LEU LEU B . n B 1 24 LYS 24 224 224 LYS LYS B . n B 1 25 GLU 25 225 225 GLU GLU B . n B 1 26 GLU 26 226 226 GLU GLU B . n B 1 27 GLY 27 227 227 GLY GLY B . n B 1 28 PHE 28 228 228 PHE PHE B . n B 1 29 GLY 29 229 229 GLY GLY B . n B 1 30 ILE 30 230 230 ILE ILE B . n B 1 31 LEU 31 231 231 LEU LEU B . n B 1 32 THR 32 232 232 THR THR B . n B 1 33 GLU 33 233 233 GLU GLU B . n B 1 34 ILE 34 234 234 ILE ILE B . n B 1 35 ASP 35 235 235 ASP ASP B . n B 1 36 VAL 36 236 236 VAL VAL B . n B 1 37 ALA 37 237 237 ALA ALA B . n B 1 38 ALA 38 238 238 ALA ALA B . n B 1 39 THR 39 239 239 THR THR B . n B 1 40 LEU 40 240 240 LEU LEU B . n B 1 41 LYS 41 241 241 LYS LYS B . n B 1 42 ALA 42 242 242 ALA ALA B . n B 1 43 LYS 43 243 243 LYS LYS B . n B 1 44 LEU 44 244 244 LEU LEU B . n B 1 45 GLY 45 245 245 GLY GLY B . n B 1 46 LEU 46 246 246 LEU LEU B . n B 1 47 GLU 47 247 247 GLU GLU B . n B 1 48 LYS 48 248 248 LYS LYS B . n B 1 49 PRO 49 249 249 PRO PRO B . n B 1 50 PRO 50 250 250 PRO PRO B . n B 1 51 TYR 51 251 251 TYR TYR B . n B 1 52 LEU 52 252 252 LEU LEU B . n B 1 53 ILE 53 253 253 ILE ILE B . n B 1 54 LEU 54 254 254 LEU LEU B . n B 1 55 GLY 55 255 255 GLY GLY B . n B 1 56 ALA 56 256 256 ALA ALA B . n B 1 57 CYS 57 257 257 CYS CYS B . n B 1 58 ASN 58 258 258 ASN ASN B . n B 1 59 PRO 59 259 259 PRO PRO B . n B 1 60 ASN 60 260 260 ASN ASN B . n B 1 61 LEU 61 261 261 LEU LEU B . n B 1 62 ALA 62 262 262 ALA ALA B . n B 1 63 ALA 63 263 263 ALA ALA B . n B 1 64 ARG 64 264 264 ARG ARG B . n B 1 65 ALA 65 265 265 ALA ALA B . n B 1 66 LEU 66 266 266 LEU LEU B . n B 1 67 GLU 67 267 267 GLU GLU B . n B 1 68 ALA 68 268 268 ALA ALA B . n B 1 69 LEU 69 269 269 LEU LEU B . n B 1 70 PRO 70 270 270 PRO PRO B . n B 1 71 GLU 71 271 271 GLU GLU B . n B 1 72 ILE 72 272 272 ILE ILE B . n B 1 73 GLY 73 273 273 GLY GLY B . n B 1 74 LEU 74 274 274 LEU LEU B . n B 1 75 LEU 75 275 275 LEU LEU B . n B 1 76 LEU 76 276 276 LEU LEU B . n B 1 77 PRO 77 277 277 PRO PRO B . n B 1 78 CYS 78 278 278 CYS CYS B . n B 1 79 ASN 79 279 279 ASN ASN B . n B 1 80 VAL 80 280 280 VAL VAL B . n B 1 81 VAL 81 281 281 VAL VAL B . n B 1 82 LEU 82 282 282 LEU LEU B . n B 1 83 ARG 83 283 283 ARG ARG B . n B 1 84 GLU 84 284 284 GLU GLU B . n B 1 85 ALA 85 285 285 ALA ALA B . n B 1 86 GLU 86 286 286 GLU GLU B . n B 1 87 GLU 87 287 287 GLU GLU B . n B 1 88 GLY 88 288 288 GLY GLY B . n B 1 89 VAL 89 289 289 VAL VAL B . n B 1 90 GLU 90 290 290 GLU GLU B . n B 1 91 VAL 91 291 291 VAL VAL B . n B 1 92 LEU 92 292 292 LEU LEU B . n B 1 93 ILE 93 293 293 ILE ILE B . n B 1 94 GLN 94 294 294 GLN GLN B . n B 1 95 ASP 95 295 295 ASP ASP B . n B 1 96 PRO 96 296 296 PRO PRO B . n B 1 97 LYS 97 297 297 LYS LYS B . n B 1 98 GLU 98 298 298 GLU GLU B . n B 1 99 MET 99 299 299 MET MET B . n B 1 100 PHE 100 300 300 PHE PHE B . n B 1 101 ARG 101 301 301 ARG ARG B . n B 1 102 VAL 102 302 302 VAL VAL B . n B 1 103 LEU 103 303 303 LEU LEU B . n B 1 104 PRO 104 304 304 PRO PRO B . n B 1 105 GLU 105 305 305 GLU GLU B . n B 1 106 ALA 106 306 306 ALA ALA B . n B 1 107 THR 107 307 307 THR THR B . n B 1 108 GLN 108 308 308 GLN GLN B . n B 1 109 ARG 109 309 309 ARG ARG B . n B 1 110 ALA 110 310 310 ALA ALA B . n B 1 111 LEU 111 311 311 LEU LEU B . n B 1 112 ALA 112 312 312 ALA ALA B . n B 1 113 PRO 113 313 313 PRO PRO B . n B 1 114 VAL 114 314 314 VAL VAL B . n B 1 115 ALA 115 315 315 ALA ALA B . n B 1 116 GLU 116 316 316 GLU GLU B . n B 1 117 GLU 117 317 317 GLU GLU B . n B 1 118 ALA 118 318 318 ALA ALA B . n B 1 119 ARG 119 319 319 ARG ARG B . n B 1 120 THR 120 320 320 THR THR B . n B 1 121 ARG 121 321 321 ARG ARG B . n B 1 122 LEU 122 322 322 LEU LEU B . n B 1 123 SER 123 323 323 SER SER B . n B 1 124 ARG 124 324 324 ARG ARG B . n B 1 125 ALA 125 325 325 ALA ALA B . n B 1 126 LEU 126 326 326 LEU LEU B . n B 1 127 SER 127 327 327 SER SER B . n B 1 128 ARG 128 328 328 ARG ARG B . n B 1 129 LEU 129 329 329 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO3 1 3016 3016 SO3 SO3 A . D 3 HOH 1 3017 1 HOH HOH A . D 3 HOH 2 3018 2 HOH HOH A . D 3 HOH 3 3019 5 HOH HOH A . D 3 HOH 4 3020 7 HOH HOH A . D 3 HOH 5 3021 8 HOH HOH A . D 3 HOH 6 3022 9 HOH HOH A . D 3 HOH 7 3023 10 HOH HOH A . D 3 HOH 8 3024 13 HOH HOH A . D 3 HOH 9 3025 14 HOH HOH A . D 3 HOH 10 3026 17 HOH HOH A . D 3 HOH 11 3027 18 HOH HOH A . D 3 HOH 12 3028 20 HOH HOH A . D 3 HOH 13 3029 21 HOH HOH A . D 3 HOH 14 3030 22 HOH HOH A . D 3 HOH 15 3031 24 HOH HOH A . D 3 HOH 16 3032 25 HOH HOH A . D 3 HOH 17 3033 28 HOH HOH A . D 3 HOH 18 3034 29 HOH HOH A . D 3 HOH 19 3035 30 HOH HOH A . D 3 HOH 20 3036 33 HOH HOH A . D 3 HOH 21 3037 34 HOH HOH A . D 3 HOH 22 3038 36 HOH HOH A . D 3 HOH 23 3039 37 HOH HOH A . D 3 HOH 24 3040 38 HOH HOH A . D 3 HOH 25 3041 39 HOH HOH A . D 3 HOH 26 3042 44 HOH HOH A . D 3 HOH 27 3043 45 HOH HOH A . D 3 HOH 28 3044 46 HOH HOH A . D 3 HOH 29 3045 47 HOH HOH A . D 3 HOH 30 3046 48 HOH HOH A . D 3 HOH 31 3047 50 HOH HOH A . D 3 HOH 32 3048 51 HOH HOH A . D 3 HOH 33 3049 52 HOH HOH A . D 3 HOH 34 3050 54 HOH HOH A . D 3 HOH 35 3051 56 HOH HOH A . D 3 HOH 36 3052 57 HOH HOH A . D 3 HOH 37 3053 58 HOH HOH A . D 3 HOH 38 3054 60 HOH HOH A . D 3 HOH 39 3055 61 HOH HOH A . D 3 HOH 40 3056 62 HOH HOH A . D 3 HOH 41 3057 64 HOH HOH A . D 3 HOH 42 3058 69 HOH HOH A . D 3 HOH 43 3059 72 HOH HOH A . D 3 HOH 44 3060 76 HOH HOH A . D 3 HOH 45 3061 78 HOH HOH A . D 3 HOH 46 3062 81 HOH HOH A . D 3 HOH 47 3063 82 HOH HOH A . D 3 HOH 48 3064 84 HOH HOH A . D 3 HOH 49 3065 86 HOH HOH A . D 3 HOH 50 3066 87 HOH HOH A . D 3 HOH 51 3067 88 HOH HOH A . D 3 HOH 52 3068 90 HOH HOH A . D 3 HOH 53 3069 94 HOH HOH A . D 3 HOH 54 3070 97 HOH HOH A . D 3 HOH 55 3071 98 HOH HOH A . D 3 HOH 56 3072 101 HOH HOH A . D 3 HOH 57 3073 102 HOH HOH A . D 3 HOH 58 3074 103 HOH HOH A . D 3 HOH 59 3075 104 HOH HOH A . D 3 HOH 60 3076 106 HOH HOH A . D 3 HOH 61 3077 108 HOH HOH A . D 3 HOH 62 3078 110 HOH HOH A . E 3 HOH 1 3 3 HOH HOH B . E 3 HOH 2 4 4 HOH HOH B . E 3 HOH 3 6 6 HOH HOH B . E 3 HOH 4 11 11 HOH HOH B . E 3 HOH 5 12 12 HOH HOH B . E 3 HOH 6 15 15 HOH HOH B . E 3 HOH 7 16 16 HOH HOH B . E 3 HOH 8 19 19 HOH HOH B . E 3 HOH 9 23 23 HOH HOH B . E 3 HOH 10 26 26 HOH HOH B . E 3 HOH 11 27 27 HOH HOH B . E 3 HOH 12 31 31 HOH HOH B . E 3 HOH 13 32 32 HOH HOH B . E 3 HOH 14 35 35 HOH HOH B . E 3 HOH 15 40 40 HOH HOH B . E 3 HOH 16 41 41 HOH HOH B . E 3 HOH 17 42 42 HOH HOH B . E 3 HOH 18 43 43 HOH HOH B . E 3 HOH 19 49 49 HOH HOH B . E 3 HOH 20 53 53 HOH HOH B . E 3 HOH 21 55 55 HOH HOH B . E 3 HOH 22 59 59 HOH HOH B . E 3 HOH 23 63 63 HOH HOH B . E 3 HOH 24 65 65 HOH HOH B . E 3 HOH 25 66 66 HOH HOH B . E 3 HOH 26 67 67 HOH HOH B . E 3 HOH 27 68 68 HOH HOH B . E 3 HOH 28 70 70 HOH HOH B . E 3 HOH 29 71 71 HOH HOH B . E 3 HOH 30 73 73 HOH HOH B . E 3 HOH 31 74 74 HOH HOH B . E 3 HOH 32 75 75 HOH HOH B . E 3 HOH 33 77 77 HOH HOH B . E 3 HOH 34 79 79 HOH HOH B . E 3 HOH 35 80 80 HOH HOH B . E 3 HOH 36 83 83 HOH HOH B . E 3 HOH 37 85 85 HOH HOH B . E 3 HOH 38 89 89 HOH HOH B . E 3 HOH 39 91 91 HOH HOH B . E 3 HOH 40 92 92 HOH HOH B . E 3 HOH 41 93 93 HOH HOH B . E 3 HOH 42 95 95 HOH HOH B . E 3 HOH 43 96 96 HOH HOH B . E 3 HOH 44 99 99 HOH HOH B . E 3 HOH 45 100 100 HOH HOH B . E 3 HOH 46 105 105 HOH HOH B . E 3 HOH 47 107 107 HOH HOH B . E 3 HOH 48 109 109 HOH HOH B . E 3 HOH 49 111 111 HOH HOH B . E 3 HOH 50 112 112 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.19 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _cell.entry_id 1J3M _cell.length_a 41.603 _cell.length_b 78.811 _cell.length_c 44.688 _cell.angle_alpha 90.00 _cell.angle_beta 116.64 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J3M _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1J3M _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_percent_sol 47.51 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'Microbatch Crystallization' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'PEGMME 5000, Ammonium Sulfate, pH 5.6, Microbatch Crystallization, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-02-04 _diffrn_detector.details monochromator # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9804 1.0 2 0.9808 1.0 3 0.9825 1.0 4 0.9720 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9804, 0.9808, 0.9825, 0.9720' # _reflns.entry_id 1J3M _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 70405 _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 50.00 _reflns.number_all ? _reflns.number_obs 16980 _reflns.percent_possible_obs 97.9 _reflns.pdbx_Rmerge_I_obs 0.036 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 83.8 _reflns_shell.Rmerge_I_obs 0.138 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1J3M _refine.ls_number_reflns_obs 15778 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.19694 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19365 _refine.ls_R_factor_R_free 0.25884 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 819 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.912 _refine.B_iso_mean 29.423 _refine.aniso_B[1][1] 0.19 _refine.aniso_B[2][2] -0.56 _refine.aniso_B[3][3] 2.13 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 1.97 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.204 _refine.pdbx_overall_ESU_R_Free 0.190 _refine.overall_SU_ML 0.146 _refine.overall_SU_B 5.188 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1924 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 112 _refine_hist.number_atoms_total 2040 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.024 0.022 ? 1947 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.150 2.027 ? 2633 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.711 5.000 ? 252 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.171 0.200 ? 322 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 1416 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.235 0.200 ? 839 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.208 0.200 ? 98 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.297 0.200 ? 32 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.224 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.270 1.500 ? 1272 'X-RAY DIFFRACTION' ? r_mcangle_it 2.247 2.000 ? 2030 'X-RAY DIFFRACTION' ? r_scbond_it 3.800 3.000 ? 675 'X-RAY DIFFRACTION' ? r_scangle_it 6.120 4.500 ? 603 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.006 _refine_ls_shell.d_res_low 2.058 _refine_ls_shell.number_reflns_R_work 880 _refine_ls_shell.R_factor_R_work 0.225 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.294 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1J3M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1J3M _struct.title 'Crystal structure of the conserved hypothetical protein TT1751 from Thermus thermophilus HB8' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1J3M _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text 'hypothetical, STRUCTURAL GENOMICS, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q84BQ8_THETH _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTGMRKTLKATLAEARAQVEAALKEEGFGILTEIDVAATLKAKLGLEKPPYLILGACNPNLAARALEALPEIGLLLPCNV VLREAEEGVEVLIQDPKEMFRVLPEATQRALAPVAEEARTRLSRALSRL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession Q84BQ8 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1J3M A 1 ? 129 ? Q84BQ8 1 ? 129 ? 1 129 2 1 1J3M B 1 ? 129 ? Q84BQ8 1 ? 129 ? 201 329 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2920 ? 1 MORE -25 ? 1 'SSA (A^2)' 12070 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 11 ? GLU A 26 ? THR A 11 GLU A 26 1 ? 16 HELX_P HELX_P2 2 VAL A 36 ? GLY A 45 ? VAL A 36 GLY A 45 1 ? 10 HELX_P HELX_P3 3 ASN A 58 ? LEU A 69 ? ASN A 58 LEU A 69 1 ? 12 HELX_P HELX_P4 4 PRO A 70 ? LEU A 76 ? PRO A 70 LEU A 76 5 ? 7 HELX_P HELX_P5 5 ASP A 95 ? PHE A 100 ? ASP A 95 PHE A 100 1 ? 6 HELX_P HELX_P6 6 ARG A 101 ? LEU A 103 ? ARG A 101 LEU A 103 5 ? 3 HELX_P HELX_P7 7 PRO A 104 ? LEU A 129 ? PRO A 104 LEU A 129 1 ? 26 HELX_P HELX_P8 8 THR B 11 ? GLU B 26 ? THR B 211 GLU B 226 1 ? 16 HELX_P HELX_P9 9 VAL B 36 ? GLY B 45 ? VAL B 236 GLY B 245 1 ? 10 HELX_P HELX_P10 10 ASN B 58 ? LEU B 69 ? ASN B 258 LEU B 269 1 ? 12 HELX_P HELX_P11 11 PRO B 70 ? LEU B 75 ? PRO B 270 LEU B 275 5 ? 6 HELX_P HELX_P12 12 ASP B 95 ? PHE B 100 ? ASP B 295 PHE B 300 1 ? 6 HELX_P HELX_P13 13 ARG B 101 ? LEU B 103 ? ARG B 301 LEU B 303 5 ? 3 HELX_P HELX_P14 14 PRO B 104 ? ALA B 106 ? PRO B 304 ALA B 306 5 ? 3 HELX_P HELX_P15 15 THR B 107 ? LEU B 129 ? THR B 307 LEU B 329 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 76 A . ? LEU 76 A PRO 77 A ? PRO 77 A 1 2.38 2 LEU 76 B . ? LEU 276 B PRO 77 B ? PRO 277 B 1 0.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? LEU A 8 ? MET A 4 LEU A 8 A 2 GLY A 88 ? ILE A 93 ? GLY A 88 ILE A 93 A 3 CYS A 78 ? ALA A 85 ? CYS A 78 ALA A 85 A 4 TYR A 51 ? CYS A 57 ? TYR A 51 CYS A 57 A 5 GLY A 29 ? ASP A 35 ? GLY A 29 ASP A 35 B 1 ARG B 5 ? LEU B 8 ? ARG B 205 LEU B 208 B 2 GLY B 88 ? ILE B 93 ? GLY B 288 ILE B 293 B 3 CYS B 78 ? ALA B 85 ? CYS B 278 ALA B 285 B 4 TYR B 51 ? CYS B 57 ? TYR B 251 CYS B 257 B 5 GLY B 29 ? ASP B 35 ? GLY B 229 ASP B 235 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 6 ? N LYS A 6 O VAL A 91 ? O VAL A 91 A 2 3 O GLY A 88 ? O GLY A 88 N ALA A 85 ? N ALA A 85 A 3 4 O LEU A 82 ? O LEU A 82 N LEU A 52 ? N LEU A 52 A 4 5 O ILE A 53 ? O ILE A 53 N ILE A 34 ? N ILE A 34 B 1 2 N LEU B 8 ? N LEU B 208 O VAL B 89 ? O VAL B 289 B 2 3 O GLY B 88 ? O GLY B 288 N ALA B 85 ? N ALA B 285 B 3 4 O LEU B 82 ? O LEU B 282 N LEU B 52 ? N LEU B 252 B 4 5 O GLY B 55 ? O GLY B 255 N THR B 32 ? N THR B 232 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SO3 _struct_site.pdbx_auth_seq_id 3016 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE SO3 A 3016' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASN A 58 ? ASN A 58 . ? 1_555 ? 2 AC1 4 ARG A 121 ? ARG A 121 . ? 1_555 ? 3 AC1 4 ASN B 58 ? ASN B 258 . ? 1_655 ? 4 AC1 4 ARG B 121 ? ARG B 321 . ? 1_655 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SD _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 MET _pdbx_validate_rmsd_bond.auth_seq_id_1 204 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 MET _pdbx_validate_rmsd_bond.auth_seq_id_2 204 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.437 _pdbx_validate_rmsd_bond.bond_target_value 1.774 _pdbx_validate_rmsd_bond.bond_deviation -0.337 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.056 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 35 ? ? CG A ASP 35 ? ? OD2 A ASP 35 ? ? 124.98 118.30 6.68 0.90 N 2 1 CG A ARG 64 ? ? CD A ARG 64 ? ? NE A ARG 64 ? ? 96.16 111.80 -15.64 2.10 N 3 1 NE A ARG 64 ? ? CZ A ARG 64 ? ? NH1 A ARG 64 ? ? 124.37 120.30 4.07 0.50 N 4 1 NE A ARG 64 ? ? CZ A ARG 64 ? ? NH2 A ARG 64 ? ? 112.28 120.30 -8.02 0.50 N 5 1 CA A LEU 66 ? ? CB A LEU 66 ? ? CG A LEU 66 ? ? 129.92 115.30 14.62 2.30 N 6 1 CA A LEU 126 ? ? CB A LEU 126 ? ? CG A LEU 126 ? ? 129.38 115.30 14.08 2.30 N 7 1 CB B ASP 235 ? ? CG B ASP 235 ? ? OD2 B ASP 235 ? ? 127.28 118.30 8.98 0.90 N 8 1 NE B ARG 283 ? ? CZ B ARG 283 ? ? NH1 B ARG 283 ? ? 123.80 120.30 3.50 0.50 N 9 1 CB B ASP 295 ? ? CG B ASP 295 ? ? OD2 B ASP 295 ? ? 124.97 118.30 6.67 0.90 N 10 1 CA B LEU 326 ? ? CB B LEU 326 ? ? CG B LEU 326 ? ? 130.16 115.30 14.86 2.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 51 ? ? -163.13 115.17 2 1 MET B 204 ? ? 65.85 84.38 3 1 LYS B 209 ? ? -68.65 77.58 4 1 GLU B 287 ? ? -98.44 40.55 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 B MET 201 ? B MET 1 4 1 Y 1 B THR 202 ? B THR 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 MET N N N N 209 MET CA C N S 210 MET C C N N 211 MET O O N N 212 MET CB C N N 213 MET CG C N N 214 MET SD S N N 215 MET CE C N N 216 MET OXT O N N 217 MET H H N N 218 MET H2 H N N 219 MET HA H N N 220 MET HB2 H N N 221 MET HB3 H N N 222 MET HG2 H N N 223 MET HG3 H N N 224 MET HE1 H N N 225 MET HE2 H N N 226 MET HE3 H N N 227 MET HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 PRO N N N N 252 PRO CA C N S 253 PRO C C N N 254 PRO O O N N 255 PRO CB C N N 256 PRO CG C N N 257 PRO CD C N N 258 PRO OXT O N N 259 PRO H H N N 260 PRO HA H N N 261 PRO HB2 H N N 262 PRO HB3 H N N 263 PRO HG2 H N N 264 PRO HG3 H N N 265 PRO HD2 H N N 266 PRO HD3 H N N 267 PRO HXT H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 SO3 S S N N 283 SO3 O1 O N N 284 SO3 O2 O N N 285 SO3 O3 O N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TYR N N N N 304 TYR CA C N S 305 TYR C C N N 306 TYR O O N N 307 TYR CB C N N 308 TYR CG C Y N 309 TYR CD1 C Y N 310 TYR CD2 C Y N 311 TYR CE1 C Y N 312 TYR CE2 C Y N 313 TYR CZ C Y N 314 TYR OH O N N 315 TYR OXT O N N 316 TYR H H N N 317 TYR H2 H N N 318 TYR HA H N N 319 TYR HB2 H N N 320 TYR HB3 H N N 321 TYR HD1 H N N 322 TYR HD2 H N N 323 TYR HE1 H N N 324 TYR HE2 H N N 325 TYR HH H N N 326 TYR HXT H N N 327 VAL N N N N 328 VAL CA C N S 329 VAL C C N N 330 VAL O O N N 331 VAL CB C N N 332 VAL CG1 C N N 333 VAL CG2 C N N 334 VAL OXT O N N 335 VAL H H N N 336 VAL H2 H N N 337 VAL HA H N N 338 VAL HB H N N 339 VAL HG11 H N N 340 VAL HG12 H N N 341 VAL HG13 H N N 342 VAL HG21 H N N 343 VAL HG22 H N N 344 VAL HG23 H N N 345 VAL HXT H N N 346 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MET N CA sing N N 197 MET N H sing N N 198 MET N H2 sing N N 199 MET CA C sing N N 200 MET CA CB sing N N 201 MET CA HA sing N N 202 MET C O doub N N 203 MET C OXT sing N N 204 MET CB CG sing N N 205 MET CB HB2 sing N N 206 MET CB HB3 sing N N 207 MET CG SD sing N N 208 MET CG HG2 sing N N 209 MET CG HG3 sing N N 210 MET SD CE sing N N 211 MET CE HE1 sing N N 212 MET CE HE2 sing N N 213 MET CE HE3 sing N N 214 MET OXT HXT sing N N 215 PHE N CA sing N N 216 PHE N H sing N N 217 PHE N H2 sing N N 218 PHE CA C sing N N 219 PHE CA CB sing N N 220 PHE CA HA sing N N 221 PHE C O doub N N 222 PHE C OXT sing N N 223 PHE CB CG sing N N 224 PHE CB HB2 sing N N 225 PHE CB HB3 sing N N 226 PHE CG CD1 doub Y N 227 PHE CG CD2 sing Y N 228 PHE CD1 CE1 sing Y N 229 PHE CD1 HD1 sing N N 230 PHE CD2 CE2 doub Y N 231 PHE CD2 HD2 sing N N 232 PHE CE1 CZ doub Y N 233 PHE CE1 HE1 sing N N 234 PHE CE2 CZ sing Y N 235 PHE CE2 HE2 sing N N 236 PHE CZ HZ sing N N 237 PHE OXT HXT sing N N 238 PRO N CA sing N N 239 PRO N CD sing N N 240 PRO N H sing N N 241 PRO CA C sing N N 242 PRO CA CB sing N N 243 PRO CA HA sing N N 244 PRO C O doub N N 245 PRO C OXT sing N N 246 PRO CB CG sing N N 247 PRO CB HB2 sing N N 248 PRO CB HB3 sing N N 249 PRO CG CD sing N N 250 PRO CG HG2 sing N N 251 PRO CG HG3 sing N N 252 PRO CD HD2 sing N N 253 PRO CD HD3 sing N N 254 PRO OXT HXT sing N N 255 SER N CA sing N N 256 SER N H sing N N 257 SER N H2 sing N N 258 SER CA C sing N N 259 SER CA CB sing N N 260 SER CA HA sing N N 261 SER C O doub N N 262 SER C OXT sing N N 263 SER CB OG sing N N 264 SER CB HB2 sing N N 265 SER CB HB3 sing N N 266 SER OG HG sing N N 267 SER OXT HXT sing N N 268 SO3 S O1 doub N N 269 SO3 S O2 sing N N 270 SO3 S O3 sing N N 271 THR N CA sing N N 272 THR N H sing N N 273 THR N H2 sing N N 274 THR CA C sing N N 275 THR CA CB sing N N 276 THR CA HA sing N N 277 THR C O doub N N 278 THR C OXT sing N N 279 THR CB OG1 sing N N 280 THR CB CG2 sing N N 281 THR CB HB sing N N 282 THR OG1 HG1 sing N N 283 THR CG2 HG21 sing N N 284 THR CG2 HG22 sing N N 285 THR CG2 HG23 sing N N 286 THR OXT HXT sing N N 287 TYR N CA sing N N 288 TYR N H sing N N 289 TYR N H2 sing N N 290 TYR CA C sing N N 291 TYR CA CB sing N N 292 TYR CA HA sing N N 293 TYR C O doub N N 294 TYR C OXT sing N N 295 TYR CB CG sing N N 296 TYR CB HB2 sing N N 297 TYR CB HB3 sing N N 298 TYR CG CD1 doub Y N 299 TYR CG CD2 sing Y N 300 TYR CD1 CE1 sing Y N 301 TYR CD1 HD1 sing N N 302 TYR CD2 CE2 doub Y N 303 TYR CD2 HD2 sing N N 304 TYR CE1 CZ doub Y N 305 TYR CE1 HE1 sing N N 306 TYR CE2 CZ sing Y N 307 TYR CE2 HE2 sing N N 308 TYR CZ OH sing N N 309 TYR OH HH sing N N 310 TYR OXT HXT sing N N 311 VAL N CA sing N N 312 VAL N H sing N N 313 VAL N H2 sing N N 314 VAL CA C sing N N 315 VAL CA CB sing N N 316 VAL CA HA sing N N 317 VAL C O doub N N 318 VAL C OXT sing N N 319 VAL CB CG1 sing N N 320 VAL CB CG2 sing N N 321 VAL CB HB sing N N 322 VAL CG1 HG11 sing N N 323 VAL CG1 HG12 sing N N 324 VAL CG1 HG13 sing N N 325 VAL CG2 HG21 sing N N 326 VAL CG2 HG22 sing N N 327 VAL CG2 HG23 sing N N 328 VAL OXT HXT sing N N 329 # _atom_sites.entry_id 1J3M _atom_sites.fract_transf_matrix[1][1] 0.024037 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.012058 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012689 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025035 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_