HEADER STRUCTURAL PROTEIN 15-MAY-01 1J72 TITLE CRYSTAL STRUCTURE OF MUTANT MACROPHAGE CAPPING PROTEIN (CAP G) WITH TITLE 2 ACTIN-SEVERING ACTIVITY IN THE CA2+-FREE FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: MACROPHAGE CAPPING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACTIN-REGULATORY PROTEIN CAP-G; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ACTIN, HUMAN, CAPPING, CAP G, MACROPHAGE, GCAP39, MBHL, GELSOLIN, KEYWDS 2 STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.M.VOROBIEV,F.S.SOUTHWICK,B.STOROKOPYTOV,S.C.ALMO REVDAT 4 07-FEB-24 1J72 1 REMARK REVDAT 3 13-JUL-11 1J72 1 VERSN REVDAT 2 24-FEB-09 1J72 1 VERSN REVDAT 1 24-JUN-03 1J72 0 JRNL AUTH S.M.VOROBIEV,F.S.SOUTHWICK,B.STOROKOPYTOV,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF MUTANT HUMAN MACROPHAGE CAPPING PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH F.S.SOUTHWICK REMARK 1 TITL GAIN-OF-FUNCTION MUTATIONS CONFERRING ACTIN-SEVERING REMARK 1 TITL 2 ACTIVITY TO HUMAN MACROPHAGE CAP G REMARK 1 REF J.BIOL.CHEM. V. 270 45 1995 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2189205.080 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 22664 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.800 REMARK 3 FREE R VALUE TEST SET COUNT : 862 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2945 REMARK 3 BIN R VALUE (WORKING SET) : 0.4020 REMARK 3 BIN FREE R VALUE : 0.3990 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 107 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.039 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2506 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.60000 REMARK 3 B22 (A**2) : 5.60000 REMARK 3 B33 (A**2) : -11.20000 REMARK 3 B12 (A**2) : 5.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM SIGMAA (A) : 0.66 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.52 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.67 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.180 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 7.170 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 10.550; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 9.450 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 12.650; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.31 REMARK 3 BSOL : 53.11 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1J72 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-01. REMARK 100 THE DEPOSITION ID IS D_1000013440. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JAN-99 REMARK 200 TEMPERATURE (KELVIN) : 100.00 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24873 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.860 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.54 REMARK 200 R MERGE FOR SHELL (I) : 0.43100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE, ROTPTF V. 6D REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, PH 7.0-8.0, 3.5 - 4.0 REMARK 280 AMMONIUM FORMATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.08700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 28.08700 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.08700 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 28.08700 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 28.08700 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.08700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -103.31150 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 178.94077 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 28.08700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 ILE A 5 REMARK 465 PRO A 6 REMARK 465 GLN A 7 REMARK 465 SER A 8 REMARK 465 GLY A 9 REMARK 465 SER A 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 17 CG CD OE1 NE2 REMARK 470 ASP A 18 CG OD1 OD2 REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 30 CG CD CE NZ REMARK 470 GLN A 36 CG CD OE1 NE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 ARG A 112 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 122 CG CD OE1 OE2 REMARK 470 GLU A 132 CG CD OE1 OE2 REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 145 CG CD CE NZ REMARK 470 SER A 199 OG REMARK 470 GLU A 200 CG CD OE1 OE2 REMARK 470 ARG A 201 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 202 CG CD OE1 NE2 REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 GLN A 206 CG CD OE1 NE2 REMARK 470 GLN A 221 CG CD OE1 NE2 REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 GLU A 231 CG CD OE1 OE2 REMARK 470 ASN A 233 CG OD1 ND2 REMARK 470 GLU A 235 CG CD OE1 OE2 REMARK 470 GLU A 236 CG CD OE1 OE2 REMARK 470 ASP A 237 CG OD1 OD2 REMARK 470 LEU A 238 CG CD1 CD2 REMARK 470 THR A 239 OG1 CG2 REMARK 470 ASP A 241 CG OD1 OD2 REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 ASN A 244 CG OD1 ND2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 LYS A 296 CG CD CE NZ REMARK 470 LYS A 299 CG CD CE NZ REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 345 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 344 N TRP A 346 1.99 REMARK 500 O LEU A 105 OG SER A 108 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLY A 100 NH1 ARG A 148 12565 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 55 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 LEU A 167 CA - CB - CG ANGL. DEV. = 17.4 DEGREES REMARK 500 TRP A 346 C - N - CA ANGL. DEV. = -15.4 DEGREES REMARK 500 TRP A 346 CA - CB - CG ANGL. DEV. = -18.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 13 4.86 -54.19 REMARK 500 SER A 15 29.35 -74.91 REMARK 500 ASP A 18 154.28 -37.88 REMARK 500 GLU A 27 -113.59 -85.61 REMARK 500 LYS A 28 -86.44 -67.59 REMARK 500 PRO A 55 -74.00 12.71 REMARK 500 GLU A 56 20.05 -74.19 REMARK 500 GLU A 102 -167.85 -55.36 REMARK 500 LYS A 145 -76.94 -77.88 REMARK 500 ILE A 196 -80.07 -43.75 REMARK 500 ARG A 197 -60.10 -27.14 REMARK 500 ASP A 198 -94.75 -75.14 REMARK 500 SER A 199 -61.37 -29.95 REMARK 500 ARG A 201 89.84 55.05 REMARK 500 LYS A 204 100.62 -167.80 REMARK 500 ASP A 212 106.06 -42.46 REMARK 500 GLU A 214 44.21 -105.31 REMARK 500 GLU A 231 -95.90 -49.42 REMARK 500 PRO A 234 -99.80 -77.65 REMARK 500 GLU A 235 154.78 -29.87 REMARK 500 GLU A 236 78.70 -105.60 REMARK 500 LEU A 238 -151.94 -124.77 REMARK 500 ALA A 243 -107.58 -127.93 REMARK 500 ASN A 244 -54.65 -133.14 REMARK 500 ALA A 245 -93.19 -95.44 REMARK 500 GLN A 246 -124.75 -90.49 REMARK 500 ALA A 247 28.26 -178.65 REMARK 500 GLN A 259 -169.00 -115.07 REMARK 500 ASP A 267 20.58 -143.32 REMARK 500 SER A 269 -75.70 -79.80 REMARK 500 CYS A 289 53.17 -110.41 REMARK 500 LYS A 299 32.78 -96.20 REMARK 500 SER A 317 -83.00 -62.53 REMARK 500 ARG A 318 -53.58 -26.14 REMARK 500 PRO A 323 -6.76 -50.69 REMARK 500 ARG A 334 36.46 -98.22 REMARK 500 PHE A 343 -165.24 -35.92 REMARK 500 LYS A 344 -96.23 -53.48 REMARK 500 ASP A 345 4.66 -30.07 REMARK 500 REMARK 500 REMARK: NULL DBREF 1J72 A 1 347 UNP P40121 CAPG_HUMAN 1 348 SEQADV 1J72 GLN A 83 UNP P40121 SEE REMARK 999 SEQADV 1J72 LEU A 84 UNP P40121 SEE REMARK 999 SEQADV 1J72 ASP A 85 UNP P40121 SEE REMARK 999 SEQADV 1J72 ASP A 86 UNP P40121 SEE REMARK 999 SEQADV 1J72 TYR A 87 UNP P40121 SEE REMARK 999 SEQADV 1J72 LEU A 88 UNP P40121 SEE REMARK 999 SEQADV 1J72 GLY A 89 UNP P40121 SEE REMARK 999 SEQADV 1J72 GLY A 90 UNP P40121 SEE REMARK 999 SEQADV 1J72 GLY A 124 UNP P40121 SEE REMARK 999 SEQADV 1J72 PHE A 125 UNP P40121 SEE REMARK 999 SEQADV 1J72 LYS A 126 UNP P40121 SEE REMARK 999 SEQADV 1J72 HIS A 127 UNP P40121 SEE REMARK 999 SEQADV 1J72 VAL A 128 UNP P40121 SEE REMARK 999 SEQADV 1J72 VAL A 129 UNP P40121 SEE REMARK 999 SEQADV 1J72 PRO A 130 UNP P40121 SEE REMARK 999 SEQADV 1J72 ASN A 131 UNP P40121 SEE REMARK 999 SEQADV 1J72 GLU A 132 UNP P40121 SEE REMARK 999 SEQADV 1J72 VAL A 133 UNP P40121 SEE REMARK 999 SEQADV 1J72 VAL A 134 UNP P40121 SEE REMARK 999 SEQADV 1J72 VAL A 135 UNP P40121 SEE REMARK 999 SEQADV 1J72 GLN A 136 UNP P40121 SEE REMARK 999 SEQADV 1J72 ARG A 137 UNP P40121 SEE REMARK 999 SEQRES 1 A 347 MET TYR THR ALA ILE PRO GLN SER GLY SER PRO PHE PRO SEQRES 2 A 347 GLY SER VAL GLN ASP PRO GLY LEU HIS VAL TRP ARG VAL SEQRES 3 A 347 GLU LYS LEU LYS PRO VAL PRO VAL ALA GLN GLU ASN GLN SEQRES 4 A 347 GLY VAL PHE PHE SER GLY ASP SER TYR LEU VAL LEU HIS SEQRES 5 A 347 ASN GLY PRO GLU GLU VAL SER HIS LEU HIS LEU TRP ILE SEQRES 6 A 347 GLY GLN GLN SER SER ARG ASP GLU GLN GLY ALA CYS ALA SEQRES 7 A 347 VAL LEU ALA VAL GLN LEU ASP ASP TYR LEU GLY GLY ARG SEQRES 8 A 347 PRO VAL GLN HIS ARG GLU VAL GLN GLY ASN GLU SER ASP SEQRES 9 A 347 LEU PHE MET SER TYR PHE PRO ARG GLY LEU LYS TYR GLN SEQRES 10 A 347 GLU GLY GLY VAL GLU SER GLY PHE LYS HIS VAL VAL PRO SEQRES 11 A 347 ASN GLU VAL VAL VAL GLN ARG LEU TYR GLN VAL LYS GLY SEQRES 12 A 347 LYS LYS ASN ILE ARG ALA THR GLU ARG ALA LEU ASN TRP SEQRES 13 A 347 ASP SER PHE ASN THR GLY ASP CYS PHE ILE LEU ASP LEU SEQRES 14 A 347 GLY GLN ASN ILE PHE ALA TRP CYS GLY GLY LYS SER ASN SEQRES 15 A 347 ILE LEU GLU ARG ASN LYS ALA ARG ASP LEU ALA LEU ALA SEQRES 16 A 347 ILE ARG ASP SER GLU ARG GLN GLY LYS ALA GLN VAL GLU SEQRES 17 A 347 ILE VAL THR ASP GLY GLU GLU PRO ALA GLU MET ILE GLN SEQRES 18 A 347 VAL LEU GLY PRO LYS PRO ALA LEU LYS GLU GLY ASN PRO SEQRES 19 A 347 GLU GLU ASP LEU THR ALA ASP LYS ALA ASN ALA GLN ALA SEQRES 20 A 347 ALA ALA LEU TYR LYS VAL SER ASP ALA THR GLY GLN MET SEQRES 21 A 347 ASN LEU THR LYS VAL ALA ASP SER SER PRO PHE ALA LEU SEQRES 22 A 347 GLU LEU LEU ILE SER ASP ASP CYS PHE VAL LEU ASP ASN SEQRES 23 A 347 GLY LEU CYS GLY LYS ILE TYR ILE TRP LYS GLY ARG LYS SEQRES 24 A 347 ALA ASN GLU LYS GLU ARG GLN ALA ALA LEU GLN VAL ALA SEQRES 25 A 347 GLU GLY PHE ILE SER ARG MET GLN TYR ALA PRO ASN THR SEQRES 26 A 347 GLN VAL GLU ILE LEU PRO GLN GLY ARG GLU SER PRO ILE SEQRES 27 A 347 PHE LYS GLN PHE PHE LYS ASP TRP LYS FORMUL 2 HOH *82(H2 O) HELIX 1 1 SER A 70 LEU A 88 1 19 HELIX 2 2 SER A 103 SER A 108 1 6 HELIX 3 3 ASN A 155 PHE A 159 5 5 HELIX 4 4 ASN A 182 ASP A 198 1 17 HELIX 5 5 PRO A 216 GLY A 224 1 9 HELIX 6 6 ALA A 272 LEU A 276 5 5 HELIX 7 7 GLY A 287 CYS A 289 5 3 HELIX 8 8 ASN A 301 GLN A 320 1 20 SHEET 1 A 5 PRO A 31 PRO A 33 0 SHEET 2 A 5 GLY A 20 VAL A 26 -1 N ARG A 25 O VAL A 32 SHEET 3 A 5 SER A 47 ASN A 53 -1 O SER A 47 N VAL A 26 SHEET 4 A 5 SER A 59 ILE A 65 -1 O HIS A 60 N HIS A 52 SHEET 5 A 5 VAL A 93 VAL A 98 1 N VAL A 93 O SER A 59 SHEET 1 B 2 VAL A 41 PHE A 43 0 SHEET 2 B 2 LYS A 115 GLN A 117 1 O LYS A 115 N PHE A 42 SHEET 1 C 5 GLN A 206 THR A 211 0 SHEET 2 C 5 ASN A 172 CYS A 177 1 O ILE A 173 N GLU A 208 SHEET 3 C 5 CYS A 164 LEU A 169 -1 N PHE A 165 O TRP A 176 SHEET 4 C 5 VAL A 134 LYS A 142 -1 O ARG A 137 N ASP A 168 SHEET 5 C 5 ARG A 148 ARG A 152 -1 N ARG A 148 O LYS A 142 SHEET 1 D 9 GLN A 206 THR A 211 0 SHEET 2 D 9 ASN A 172 CYS A 177 1 O ILE A 173 N GLU A 208 SHEET 3 D 9 CYS A 164 LEU A 169 -1 N PHE A 165 O TRP A 176 SHEET 4 D 9 VAL A 134 LYS A 142 -1 O ARG A 137 N ASP A 168 SHEET 5 D 9 ASN A 261 ALA A 266 1 O LEU A 262 N GLN A 136 SHEET 6 D 9 ALA A 249 SER A 254 -1 N LEU A 250 O ALA A 266 SHEET 7 D 9 CYS A 281 ASP A 285 -1 O CYS A 281 N VAL A 253 SHEET 8 D 9 LYS A 291 LYS A 296 -1 N TYR A 293 O LEU A 284 SHEET 9 D 9 GLN A 326 PRO A 331 1 O GLN A 326 N ILE A 292 CRYST1 206.623 206.623 56.174 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004840 0.002794 0.000000 0.00000 SCALE2 0.000000 0.005588 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017802 0.00000