HEADER HYDROLASE 21-MAY-01 1J8D TITLE STRUCTURE OF THE METAL-FREE FORM OF THE DEOXY-D-MANNOSE-OCTULOSONATE TITLE 2 8-PHOSPHATE PHOSPHATASE (YRBI) FROM HAEMOPHILUS INFLUENZAE (HI1679) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEOXY-D-MANNOSE-OCTULOSONATE 8-PHOSPHATE PHOSPHATASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: YRBI, KDO 8-P PHOSPHATASE, HI1679; COMPND 5 EC: 3.1.3.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE RD; SOURCE 3 ORGANISM_TAXID: 71421; SOURCE 4 STRAIN: KW20; SOURCE 5 GENE: HI1679; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PDEST14; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST14-HI1679 KEYWDS HI1679, STRUCTURAL GENOMICS, KDO 8-P PHOSPHATASE, STRUCTURE 2 KEYWDS 2 FUNCTION PROJECT, S2F, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.LIM,O.HERZBERG,STRUCTURE 2 FUNCTION PROJECT (S2F) REVDAT 6 13-NOV-24 1J8D 1 REMARK SEQADV LINK REVDAT 5 13-JUL-11 1J8D 1 VERSN REVDAT 4 24-FEB-09 1J8D 1 VERSN REVDAT 3 12-AUG-03 1J8D 1 REMARK REVDAT 2 22-APR-03 1J8D 1 JRNL TITLE COMPND KEYWDS REVDAT 1 27-FEB-02 1J8D 0 JRNL AUTH J.F.PARSONS,K.LIM,A.TEMPCZYK,W.KRAJEWSKI,E.EISENSTEIN, JRNL AUTH 2 O.HERZBERG JRNL TITL FROM STRUCTURE TO FUNCTION: YRBI FROM HAEMOPHILUS INFLUENZAE JRNL TITL 2 (HI1679) IS A PHOSPHATASE. JRNL REF PROTEINS V. 46 393 2002 JRNL REFN ISSN 0887-3585 JRNL PMID 11835514 JRNL DOI 10.1002/PROT.10057 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 26906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1581 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1980 REMARK 3 BIN FREE R VALUE : 0.3020 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5448 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 259 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1J8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-01. REMARK 100 THE DEPOSITION ID IS D_1000013487. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790, 0.9787, 0.9500 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRANDEIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28788 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.17100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE, SHELX, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MG/ML) IN 10MM NAHEPES, PH REMARK 280 7.5, 1MM EDTA, 1MM DTT; CRYSTALLIZATION IN 22% POLYETHYLENE REMARK 280 GLYCOL 4000, 0.1 M TRIS-HCL, 0.2 M LITHIUM SULFATE. GLYCEROL REMARK 280 ADDED AS CRYOPROTECTANT., PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.88500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.15000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 70.48500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.88500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.15000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.48500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.88500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.15000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.48500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.88500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 66.15000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.48500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE FUNCTION OF THE PROTEIN WAS ASSIGNED REMARK 400 INDEPENDENTLY BY THE WOODARD GROUP: ESCHERICHIA REMARK 400 COLI YRBI IS 3-DEOXY-D-MANNO-OCTULOSONATE REMARK 400 8-PHOSPHATE PHOSPHATASE, WU J, WOODARD RW; REMARK 400 J BIOL CHEM. 2003 278:18117-2. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 15 -70.24 -110.48 REMARK 500 ALA A 28 -16.68 -49.04 REMARK 500 ASP A 107 -17.49 -153.40 REMARK 500 VAL B 15 -71.82 -101.09 REMARK 500 ASP B 107 -10.00 -150.09 REMARK 500 VAL C 15 -74.26 -102.97 REMARK 500 VAL C 18 -64.91 -109.69 REMARK 500 GLU C 85 -71.17 -59.42 REMARK 500 ASP C 107 -27.15 -147.94 REMARK 500 MSE C 178 45.82 -103.42 REMARK 500 ALA D 28 -19.75 -49.08 REMARK 500 GLU D 100 0.97 -59.25 REMARK 500 ASP D 107 -23.96 -144.87 REMARK 500 SER D 177 19.21 -146.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1K1E RELATED DB: PDB REMARK 900 1K1E IS THE COBALT BOUND FORM OF THE HI1679 STRUCTURE DETERMINED TO REMARK 900 1.67 ANGSTROM REMARK 900 RELATED ID: HI1679 RELATED DB: TARGETDB DBREF 1J8D A 1 180 UNP P45314 KDOP_HAEIN 1 180 DBREF 1J8D B 1 180 UNP P45314 KDOP_HAEIN 1 180 DBREF 1J8D C 1 180 UNP P45314 KDOP_HAEIN 1 180 DBREF 1J8D D 1 180 UNP P45314 KDOP_HAEIN 1 180 SEQADV 1J8D MSE A 1 UNP P45314 MET 1 MODIFIED RESIDUE SEQADV 1J8D MSE A 46 UNP P45314 MET 46 MODIFIED RESIDUE SEQADV 1J8D MSE A 48 UNP P45314 MET 48 MODIFIED RESIDUE SEQADV 1J8D MSE A 92 UNP P45314 MET 92 MODIFIED RESIDUE SEQADV 1J8D MSE A 151 UNP P45314 MET 151 MODIFIED RESIDUE SEQADV 1J8D MSE A 154 UNP P45314 MET 154 MODIFIED RESIDUE SEQADV 1J8D MSE A 178 UNP P45314 MET 178 MODIFIED RESIDUE SEQADV 1J8D MSE B 1 UNP P45314 MET 1 MODIFIED RESIDUE SEQADV 1J8D MSE B 46 UNP P45314 MET 46 MODIFIED RESIDUE SEQADV 1J8D MSE B 48 UNP P45314 MET 48 MODIFIED RESIDUE SEQADV 1J8D MSE B 92 UNP P45314 MET 92 MODIFIED RESIDUE SEQADV 1J8D MSE B 151 UNP P45314 MET 151 MODIFIED RESIDUE SEQADV 1J8D MSE B 154 UNP P45314 MET 154 MODIFIED RESIDUE SEQADV 1J8D MSE B 178 UNP P45314 MET 178 MODIFIED RESIDUE SEQADV 1J8D MSE C 1 UNP P45314 MET 1 MODIFIED RESIDUE SEQADV 1J8D MSE C 46 UNP P45314 MET 46 MODIFIED RESIDUE SEQADV 1J8D MSE C 48 UNP P45314 MET 48 MODIFIED RESIDUE SEQADV 1J8D MSE C 92 UNP P45314 MET 92 MODIFIED RESIDUE SEQADV 1J8D MSE C 151 UNP P45314 MET 151 MODIFIED RESIDUE SEQADV 1J8D MSE C 154 UNP P45314 MET 154 MODIFIED RESIDUE SEQADV 1J8D MSE C 178 UNP P45314 MET 178 MODIFIED RESIDUE SEQADV 1J8D MSE D 1 UNP P45314 MET 1 MODIFIED RESIDUE SEQADV 1J8D MSE D 46 UNP P45314 MET 46 MODIFIED RESIDUE SEQADV 1J8D MSE D 48 UNP P45314 MET 48 MODIFIED RESIDUE SEQADV 1J8D MSE D 92 UNP P45314 MET 92 MODIFIED RESIDUE SEQADV 1J8D MSE D 151 UNP P45314 MET 151 MODIFIED RESIDUE SEQADV 1J8D MSE D 154 UNP P45314 MET 154 MODIFIED RESIDUE SEQADV 1J8D MSE D 178 UNP P45314 MET 178 MODIFIED RESIDUE SEQRES 1 A 180 MSE GLN GLN LYS LEU GLU ASN ILE LYS PHE VAL ILE THR SEQRES 2 A 180 ASP VAL ASP GLY VAL LEU THR ASP GLY GLN LEU HIS TYR SEQRES 3 A 180 ASP ALA ASN GLY GLU ALA ILE LYS SER PHE HIS VAL ARG SEQRES 4 A 180 ASP GLY LEU GLY ILE LYS MSE LEU MSE ASP ALA ASP ILE SEQRES 5 A 180 GLN VAL ALA VAL LEU SER GLY ARG ASP SER PRO ILE LEU SEQRES 6 A 180 ARG ARG ARG ILE ALA ASP LEU GLY ILE LYS LEU PHE PHE SEQRES 7 A 180 LEU GLY LYS LEU GLU LYS GLU THR ALA CYS PHE ASP LEU SEQRES 8 A 180 MSE LYS GLN ALA GLY VAL THR ALA GLU GLN THR ALA TYR SEQRES 9 A 180 ILE GLY ASP ASP SER VAL ASP LEU PRO ALA PHE ALA ALA SEQRES 10 A 180 CYS GLY THR SER PHE ALA VAL ALA ASP ALA PRO ILE TYR SEQRES 11 A 180 VAL LYS ASN ALA VAL ASP HIS VAL LEU SER THR HIS GLY SEQRES 12 A 180 GLY LYS GLY ALA PHE ARG GLU MSE SER ASP MSE ILE LEU SEQRES 13 A 180 GLN ALA GLN GLY LYS SER SER VAL PHE ASP THR ALA GLN SEQRES 14 A 180 GLY PHE LEU LYS SER VAL LYS SER MSE GLY GLN SEQRES 1 B 180 MSE GLN GLN LYS LEU GLU ASN ILE LYS PHE VAL ILE THR SEQRES 2 B 180 ASP VAL ASP GLY VAL LEU THR ASP GLY GLN LEU HIS TYR SEQRES 3 B 180 ASP ALA ASN GLY GLU ALA ILE LYS SER PHE HIS VAL ARG SEQRES 4 B 180 ASP GLY LEU GLY ILE LYS MSE LEU MSE ASP ALA ASP ILE SEQRES 5 B 180 GLN VAL ALA VAL LEU SER GLY ARG ASP SER PRO ILE LEU SEQRES 6 B 180 ARG ARG ARG ILE ALA ASP LEU GLY ILE LYS LEU PHE PHE SEQRES 7 B 180 LEU GLY LYS LEU GLU LYS GLU THR ALA CYS PHE ASP LEU SEQRES 8 B 180 MSE LYS GLN ALA GLY VAL THR ALA GLU GLN THR ALA TYR SEQRES 9 B 180 ILE GLY ASP ASP SER VAL ASP LEU PRO ALA PHE ALA ALA SEQRES 10 B 180 CYS GLY THR SER PHE ALA VAL ALA ASP ALA PRO ILE TYR SEQRES 11 B 180 VAL LYS ASN ALA VAL ASP HIS VAL LEU SER THR HIS GLY SEQRES 12 B 180 GLY LYS GLY ALA PHE ARG GLU MSE SER ASP MSE ILE LEU SEQRES 13 B 180 GLN ALA GLN GLY LYS SER SER VAL PHE ASP THR ALA GLN SEQRES 14 B 180 GLY PHE LEU LYS SER VAL LYS SER MSE GLY GLN SEQRES 1 C 180 MSE GLN GLN LYS LEU GLU ASN ILE LYS PHE VAL ILE THR SEQRES 2 C 180 ASP VAL ASP GLY VAL LEU THR ASP GLY GLN LEU HIS TYR SEQRES 3 C 180 ASP ALA ASN GLY GLU ALA ILE LYS SER PHE HIS VAL ARG SEQRES 4 C 180 ASP GLY LEU GLY ILE LYS MSE LEU MSE ASP ALA ASP ILE SEQRES 5 C 180 GLN VAL ALA VAL LEU SER GLY ARG ASP SER PRO ILE LEU SEQRES 6 C 180 ARG ARG ARG ILE ALA ASP LEU GLY ILE LYS LEU PHE PHE SEQRES 7 C 180 LEU GLY LYS LEU GLU LYS GLU THR ALA CYS PHE ASP LEU SEQRES 8 C 180 MSE LYS GLN ALA GLY VAL THR ALA GLU GLN THR ALA TYR SEQRES 9 C 180 ILE GLY ASP ASP SER VAL ASP LEU PRO ALA PHE ALA ALA SEQRES 10 C 180 CYS GLY THR SER PHE ALA VAL ALA ASP ALA PRO ILE TYR SEQRES 11 C 180 VAL LYS ASN ALA VAL ASP HIS VAL LEU SER THR HIS GLY SEQRES 12 C 180 GLY LYS GLY ALA PHE ARG GLU MSE SER ASP MSE ILE LEU SEQRES 13 C 180 GLN ALA GLN GLY LYS SER SER VAL PHE ASP THR ALA GLN SEQRES 14 C 180 GLY PHE LEU LYS SER VAL LYS SER MSE GLY GLN SEQRES 1 D 180 MSE GLN GLN LYS LEU GLU ASN ILE LYS PHE VAL ILE THR SEQRES 2 D 180 ASP VAL ASP GLY VAL LEU THR ASP GLY GLN LEU HIS TYR SEQRES 3 D 180 ASP ALA ASN GLY GLU ALA ILE LYS SER PHE HIS VAL ARG SEQRES 4 D 180 ASP GLY LEU GLY ILE LYS MSE LEU MSE ASP ALA ASP ILE SEQRES 5 D 180 GLN VAL ALA VAL LEU SER GLY ARG ASP SER PRO ILE LEU SEQRES 6 D 180 ARG ARG ARG ILE ALA ASP LEU GLY ILE LYS LEU PHE PHE SEQRES 7 D 180 LEU GLY LYS LEU GLU LYS GLU THR ALA CYS PHE ASP LEU SEQRES 8 D 180 MSE LYS GLN ALA GLY VAL THR ALA GLU GLN THR ALA TYR SEQRES 9 D 180 ILE GLY ASP ASP SER VAL ASP LEU PRO ALA PHE ALA ALA SEQRES 10 D 180 CYS GLY THR SER PHE ALA VAL ALA ASP ALA PRO ILE TYR SEQRES 11 D 180 VAL LYS ASN ALA VAL ASP HIS VAL LEU SER THR HIS GLY SEQRES 12 D 180 GLY LYS GLY ALA PHE ARG GLU MSE SER ASP MSE ILE LEU SEQRES 13 D 180 GLN ALA GLN GLY LYS SER SER VAL PHE ASP THR ALA GLN SEQRES 14 D 180 GLY PHE LEU LYS SER VAL LYS SER MSE GLY GLN MODRES 1J8D MSE A 1 MET SELENOMETHIONINE MODRES 1J8D MSE A 46 MET SELENOMETHIONINE MODRES 1J8D MSE A 48 MET SELENOMETHIONINE MODRES 1J8D MSE A 92 MET SELENOMETHIONINE MODRES 1J8D MSE A 151 MET SELENOMETHIONINE MODRES 1J8D MSE A 154 MET SELENOMETHIONINE MODRES 1J8D MSE A 178 MET SELENOMETHIONINE MODRES 1J8D MSE B 1 MET SELENOMETHIONINE MODRES 1J8D MSE B 46 MET SELENOMETHIONINE MODRES 1J8D MSE B 48 MET SELENOMETHIONINE MODRES 1J8D MSE B 92 MET SELENOMETHIONINE MODRES 1J8D MSE B 151 MET SELENOMETHIONINE MODRES 1J8D MSE B 154 MET SELENOMETHIONINE MODRES 1J8D MSE B 178 MET SELENOMETHIONINE MODRES 1J8D MSE C 1 MET SELENOMETHIONINE MODRES 1J8D MSE C 46 MET SELENOMETHIONINE MODRES 1J8D MSE C 48 MET SELENOMETHIONINE MODRES 1J8D MSE C 92 MET SELENOMETHIONINE MODRES 1J8D MSE C 151 MET SELENOMETHIONINE MODRES 1J8D MSE C 154 MET SELENOMETHIONINE MODRES 1J8D MSE C 178 MET SELENOMETHIONINE MODRES 1J8D MSE D 1 MET SELENOMETHIONINE MODRES 1J8D MSE D 46 MET SELENOMETHIONINE MODRES 1J8D MSE D 48 MET SELENOMETHIONINE MODRES 1J8D MSE D 92 MET SELENOMETHIONINE MODRES 1J8D MSE D 151 MET SELENOMETHIONINE MODRES 1J8D MSE D 154 MET SELENOMETHIONINE MODRES 1J8D MSE D 178 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 46 8 HET MSE A 48 8 HET MSE A 92 8 HET MSE A 151 8 HET MSE A 154 8 HET MSE A 178 8 HET MSE B 1 8 HET MSE B 46 8 HET MSE B 48 8 HET MSE B 92 8 HET MSE B 151 8 HET MSE B 154 8 HET MSE B 178 8 HET MSE C 1 8 HET MSE C 46 8 HET MSE C 48 8 HET MSE C 92 8 HET MSE C 151 8 HET MSE C 154 8 HET MSE C 178 8 HET MSE D 1 8 HET MSE D 46 8 HET MSE D 48 8 HET MSE D 92 8 HET MSE D 151 8 HET MSE D 154 8 HET MSE D 178 8 HET GOL D 200 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 28(C5 H11 N O2 SE) FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *259(H2 O) HELIX 1 1 MSE A 1 ASN A 7 1 7 HELIX 2 2 VAL A 38 ALA A 50 1 13 HELIX 3 3 SER A 62 GLY A 73 1 12 HELIX 4 4 GLU A 83 GLY A 96 1 14 HELIX 5 5 THR A 98 GLU A 100 5 3 HELIX 6 6 ASP A 108 VAL A 110 5 3 HELIX 7 7 ASP A 111 CYS A 118 1 8 HELIX 8 8 PRO A 128 ASN A 133 1 6 HELIX 9 9 GLY A 146 GLN A 159 1 14 HELIX 10 10 SER A 162 THR A 167 1 6 HELIX 11 11 THR A 167 SER A 174 1 8 HELIX 12 12 VAL A 175 MSE A 178 5 4 HELIX 13 13 MSE B 1 ILE B 8 1 8 HELIX 14 14 VAL B 38 ALA B 50 1 13 HELIX 15 15 SER B 62 GLY B 73 1 12 HELIX 16 16 GLU B 83 GLY B 96 1 14 HELIX 17 17 THR B 98 GLU B 100 5 3 HELIX 18 18 ASP B 108 VAL B 110 5 3 HELIX 19 19 ASP B 111 CYS B 118 1 8 HELIX 20 20 PRO B 128 ASN B 133 1 6 HELIX 21 21 GLY B 146 GLN B 159 1 14 HELIX 22 22 SER B 162 THR B 167 1 6 HELIX 23 23 THR B 167 VAL B 175 1 9 HELIX 24 24 LYS B 176 MSE B 178 5 3 HELIX 25 25 MSE C 1 ILE C 8 1 8 HELIX 26 26 VAL C 38 ALA C 50 1 13 HELIX 27 27 SER C 62 GLY C 73 1 12 HELIX 28 28 GLU C 83 GLY C 96 1 14 HELIX 29 29 THR C 98 GLU C 100 5 3 HELIX 30 30 ASP C 108 VAL C 110 5 3 HELIX 31 31 ASP C 111 CYS C 118 1 8 HELIX 32 32 PRO C 128 ASN C 133 1 6 HELIX 33 33 GLY C 146 ALA C 158 1 13 HELIX 34 34 GLN C 159 GLY C 160 5 2 HELIX 35 35 LYS C 161 LYS C 161 5 1 HELIX 36 36 SER C 162 THR C 167 1 6 HELIX 37 37 THR C 167 SER C 174 1 8 HELIX 38 38 VAL C 175 MSE C 178 5 4 HELIX 39 39 MSE D 1 GLU D 6 1 6 HELIX 40 40 VAL D 38 ALA D 50 1 13 HELIX 41 41 SER D 62 GLY D 73 1 12 HELIX 42 42 LYS D 84 GLY D 96 1 13 HELIX 43 43 THR D 98 GLU D 100 5 3 HELIX 44 44 ASP D 108 VAL D 110 5 3 HELIX 45 45 ASP D 111 GLY D 119 1 9 HELIX 46 46 PRO D 128 ASN D 133 1 6 HELIX 47 47 GLY D 146 GLN D 159 1 14 HELIX 48 48 SER D 162 THR D 167 1 6 HELIX 49 49 THR D 167 SER D 174 1 8 HELIX 50 50 VAL D 175 MSE D 178 5 4 SHEET 1 A 6 LEU A 76 PHE A 78 0 SHEET 2 A 6 GLN A 53 LEU A 57 1 O VAL A 54 N LEU A 76 SHEET 3 A 6 PHE A 10 THR A 13 1 O VAL A 11 N ALA A 55 SHEET 4 A 6 THR A 102 GLY A 106 1 N ALA A 103 O PHE A 10 SHEET 5 A 6 THR A 120 ALA A 123 1 N THR A 120 O THR A 102 SHEET 6 A 6 HIS A 137 VAL A 138 1 N HIS A 137 O SER A 121 SHEET 1 B 9 GLN A 23 ASP A 27 0 SHEET 2 B 9 GLY A 30 HIS A 37 -1 N GLY A 30 O ASP A 27 SHEET 3 B 9 GLN C 23 ASP C 27 -1 N LEU C 24 O PHE A 36 SHEET 4 B 9 GLY C 30 HIS C 37 -1 O GLY C 30 N ASP C 27 SHEET 5 B 9 GLN D 23 ASP D 27 -1 N LEU D 24 O PHE C 36 SHEET 6 B 9 GLY D 30 HIS D 37 -1 N GLY D 30 O ASP D 27 SHEET 7 B 9 GLN B 23 ASP B 27 -1 N LEU B 24 O PHE D 36 SHEET 8 B 9 GLY B 30 HIS B 37 -1 O GLY B 30 N ASP B 27 SHEET 9 B 9 GLN A 23 ASP A 27 -1 O LEU A 24 N PHE B 36 SHEET 1 C 6 LEU B 76 LEU B 79 0 SHEET 2 C 6 GLN B 53 SER B 58 1 O VAL B 54 N LEU B 76 SHEET 3 C 6 PHE B 10 THR B 13 1 N VAL B 11 O GLN B 53 SHEET 4 C 6 THR B 102 GLY B 106 1 N ALA B 103 O PHE B 10 SHEET 5 C 6 THR B 120 ALA B 123 1 O THR B 120 N TYR B 104 SHEET 6 C 6 HIS B 137 VAL B 138 1 O HIS B 137 N ALA B 123 SHEET 1 D 6 LEU C 76 PHE C 78 0 SHEET 2 D 6 GLN C 53 LEU C 57 1 O VAL C 54 N LEU C 76 SHEET 3 D 6 PHE C 10 THR C 13 1 N VAL C 11 O GLN C 53 SHEET 4 D 6 THR C 102 GLY C 106 1 N ALA C 103 O PHE C 10 SHEET 5 D 6 THR C 120 ALA C 123 1 N THR C 120 O THR C 102 SHEET 6 D 6 HIS C 137 VAL C 138 1 N HIS C 137 O SER C 121 SHEET 1 E 6 LEU D 76 LEU D 79 0 SHEET 2 E 6 GLN D 53 SER D 58 1 O VAL D 54 N LEU D 76 SHEET 3 E 6 PHE D 10 THR D 13 1 N VAL D 11 O GLN D 53 SHEET 4 E 6 THR D 102 GLY D 106 1 O ALA D 103 N ILE D 12 SHEET 5 E 6 THR D 120 ALA D 123 1 O THR D 120 N TYR D 104 SHEET 6 E 6 HIS D 137 VAL D 138 1 O HIS D 137 N ALA D 123 LINK C MSE A 1 N GLN A 2 1555 1555 1.34 LINK C LYS A 45 N MSE A 46 1555 1555 1.33 LINK C MSE A 46 N LEU A 47 1555 1555 1.33 LINK C LEU A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N ASP A 49 1555 1555 1.32 LINK C LEU A 91 N MSE A 92 1555 1555 1.32 LINK C MSE A 92 N LYS A 93 1555 1555 1.34 LINK C GLU A 150 N MSE A 151 1555 1555 1.34 LINK C MSE A 151 N SER A 152 1555 1555 1.33 LINK C ASP A 153 N MSE A 154 1555 1555 1.32 LINK C MSE A 154 N ILE A 155 1555 1555 1.33 LINK C SER A 177 N MSE A 178 1555 1555 1.33 LINK C MSE A 178 N GLY A 179 1555 1555 1.33 LINK C MSE B 1 N GLN B 2 1555 1555 1.33 LINK C LYS B 45 N MSE B 46 1555 1555 1.33 LINK C MSE B 46 N LEU B 47 1555 1555 1.34 LINK C LEU B 47 N MSE B 48 1555 1555 1.33 LINK C MSE B 48 N ASP B 49 1555 1555 1.33 LINK C LEU B 91 N MSE B 92 1555 1555 1.32 LINK C MSE B 92 N LYS B 93 1555 1555 1.33 LINK C GLU B 150 N MSE B 151 1555 1555 1.33 LINK C MSE B 151 N SER B 152 1555 1555 1.32 LINK C ASP B 153 N MSE B 154 1555 1555 1.33 LINK C MSE B 154 N ILE B 155 1555 1555 1.33 LINK C SER B 177 N MSE B 178 1555 1555 1.33 LINK C MSE B 178 N GLY B 179 1555 1555 1.33 LINK C MSE C 1 N GLN C 2 1555 1555 1.33 LINK C LYS C 45 N MSE C 46 1555 1555 1.33 LINK C MSE C 46 N LEU C 47 1555 1555 1.33 LINK C LEU C 47 N MSE C 48 1555 1555 1.34 LINK C MSE C 48 N ASP C 49 1555 1555 1.33 LINK C LEU C 91 N MSE C 92 1555 1555 1.32 LINK C MSE C 92 N LYS C 93 1555 1555 1.33 LINK C GLU C 150 N MSE C 151 1555 1555 1.33 LINK C MSE C 151 N SER C 152 1555 1555 1.33 LINK C ASP C 153 N MSE C 154 1555 1555 1.32 LINK C MSE C 154 N ILE C 155 1555 1555 1.33 LINK C SER C 177 N MSE C 178 1555 1555 1.33 LINK C MSE C 178 N GLY C 179 1555 1555 1.33 LINK C MSE D 1 N GLN D 2 1555 1555 1.34 LINK C LYS D 45 N MSE D 46 1555 1555 1.33 LINK C MSE D 46 N LEU D 47 1555 1555 1.33 LINK C LEU D 47 N MSE D 48 1555 1555 1.33 LINK C MSE D 48 N ASP D 49 1555 1555 1.32 LINK C LEU D 91 N MSE D 92 1555 1555 1.33 LINK C MSE D 92 N LYS D 93 1555 1555 1.34 LINK C GLU D 150 N MSE D 151 1555 1555 1.32 LINK C MSE D 151 N SER D 152 1555 1555 1.32 LINK C ASP D 153 N MSE D 154 1555 1555 1.33 LINK C MSE D 154 N ILE D 155 1555 1555 1.33 LINK C SER D 177 N MSE D 178 1555 1555 1.33 LINK C MSE D 178 N GLY D 179 1555 1555 1.33 SITE 1 AC1 1 ILE D 33 CRYST1 67.770 132.300 140.970 90.00 90.00 90.00 I 2 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014756 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007559 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007094 0.00000 HETATM 1 N MSE A 1 13.677 52.483 21.487 1.00 46.95 N HETATM 2 CA MSE A 1 14.789 51.483 21.545 1.00 48.10 C HETATM 3 C MSE A 1 15.345 51.024 20.189 1.00 49.88 C HETATM 4 O MSE A 1 16.560 50.889 20.044 1.00 51.85 O HETATM 5 CB MSE A 1 14.353 50.239 22.330 1.00 45.03 C HETATM 6 CG MSE A 1 14.082 50.476 23.809 1.00 42.61 C HETATM 7 SE MSE A 1 15.587 51.168 24.758 1.00 31.07 SE HETATM 8 CE MSE A 1 16.842 49.770 24.380 1.00 41.47 C