HEADER OXIDOREDUCTASE 29-MAY-01 1JA8 TITLE KINETIC ANALYSIS OF PRODUCT INHIBITION IN HUMAN MANGANESE SUPEROXIDE TITLE 2 DISMUTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANGANESE SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL; COMPND 5 EC: 1.15.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHMNSDO4 KEYWDS MANGANESE, SUPEROXIDE, DISUMTASE, SOD, MNSOD, HOMO SAPIEN, ALPHA- KEYWDS 2 BETA, TWO-DOMAIN, HOMOTETRAMER, HYDROGEN BOND NETWORK, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.S.HEARN,M.E.STROUPE,D.E.CABELLI,J.R.LEPOCK,J.A.TAINER,H.S.NICK, AUTHOR 2 D.S.SILVERMAN REVDAT 6 16-AUG-23 1JA8 1 REMARK REVDAT 5 27-OCT-21 1JA8 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1JA8 1 VERSN REVDAT 3 24-FEB-09 1JA8 1 VERSN REVDAT 2 28-SEP-04 1JA8 1 JRNL REVDAT 1 06-JUN-01 1JA8 0 JRNL AUTH A.S.HEARN,M.E.STROUPE,D.E.CABELLI,J.R.LEPOCK,J.A.TAINER, JRNL AUTH 2 H.S.NICK,D.N.SILVERMAN JRNL TITL KINETIC ANALYSIS OF PRODUCT INHIBITION IN HUMAN MANGANESE JRNL TITL 2 SUPEROXIDE DISMUTASE. JRNL REF BIOCHEMISTRY V. 40 12051 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11580280 JRNL DOI 10.1021/BI011047F REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 4108688.630 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 26963 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2591 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.12 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3867 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 438 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3128 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 358 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.64000 REMARK 3 B22 (A**2) : 2.64000 REMARK 3 B33 (A**2) : -5.28000 REMARK 3 B12 (A**2) : 4.74000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.31 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.026 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.220 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 0.420 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 0.140 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 0.250 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 53.35 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JA8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAY-01. REMARK 100 THE DEPOSITION ID IS D_1000013554. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-00 REMARK 200 TEMPERATURE (KELVIN) : 132 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.77300 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(311) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26963 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.51900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1AP6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, IMIDAZOLE-MALATE, PH REMARK 280 8, VAPOR DIFFUSION, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.03367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 160.06733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 120.05050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 200.08417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.01683 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.03367 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 160.06733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 200.08417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 120.05050 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.01683 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 10150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -168.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 39.80400 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 68.94255 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 200.08417 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 582 O HOH A 582 10665 1.21 REMARK 500 O HOH B 538 O HOH B 538 10665 1.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 142 -120.47 46.76 REMARK 500 TYR A 165 -14.20 -157.46 REMARK 500 LYS A 170 -142.57 50.31 REMARK 500 CYS A 196 50.38 -96.08 REMARK 500 ASN B 142 -124.02 51.66 REMARK 500 TYR B 165 -19.73 -152.53 REMARK 500 LYS B 170 -136.98 59.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 199 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 26 NE2 REMARK 620 2 HIS A 74 NE2 88.8 REMARK 620 3 ASP A 159 OD1 84.1 102.5 REMARK 620 4 HIS A 163 NE2 85.8 136.7 119.5 REMARK 620 5 HOH A 430 O 169.2 101.4 90.1 89.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 199 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 26 NE2 REMARK 620 2 HIS B 74 NE2 83.3 REMARK 620 3 ASP B 159 OD2 87.2 107.4 REMARK 620 4 HIS B 163 NE2 90.3 131.5 120.3 REMARK 620 5 HOH B 429 O 167.6 93.1 82.5 100.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 426 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 428 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 429 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ABM RELATED DB: PDB REMARK 900 MANGANESE SUPEROXIDE DISMUTASE, WILD TYPE REMARK 900 RELATED ID: 1EM1 RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE FOR HUMAN MANGANESE SUPEROXIDE DISMUTASE, REMARK 900 Q143A REMARK 900 RELATED ID: 1AP5 RELATED DB: PDB REMARK 900 TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE REMARK 900 DISMUTASE REMARK 900 RELATED ID: 1AP6 RELATED DB: PDB REMARK 900 TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE REMARK 900 DISMUTASE DBREF 1JA8 A 1 198 UNP P04179 SODM_HUMAN 25 222 DBREF 1JA8 B 1 198 UNP P04179 SODM_HUMAN 25 222 SEQADV 1JA8 ALA A 161 UNP P04179 TRP 185 ENGINEERED MUTATION SEQADV 1JA8 ALA B 161 UNP P04179 TRP 185 ENGINEERED MUTATION SEQRES 1 A 198 LYS HIS SER LEU PRO ASP LEU PRO TYR ASP TYR GLY ALA SEQRES 2 A 198 LEU GLU PRO HIS ILE ASN ALA GLN ILE MET GLN LEU HIS SEQRES 3 A 198 HIS SER LYS HIS HIS ALA ALA TYR VAL ASN ASN LEU ASN SEQRES 4 A 198 VAL THR GLU GLU LYS TYR GLN GLU ALA LEU ALA LYS GLY SEQRES 5 A 198 ASP VAL THR ALA GLN ILE ALA LEU GLN PRO ALA LEU LYS SEQRES 6 A 198 PHE ASN GLY GLY GLY HIS ILE ASN HIS SER ILE PHE TRP SEQRES 7 A 198 THR ASN LEU SER PRO ASN GLY GLY GLY GLU PRO LYS GLY SEQRES 8 A 198 GLU LEU LEU GLU ALA ILE LYS ARG ASP PHE GLY SER PHE SEQRES 9 A 198 ASP LYS PHE LYS GLU LYS LEU THR ALA ALA SER VAL GLY SEQRES 10 A 198 VAL GLN GLY SER GLY TRP GLY TRP LEU GLY PHE ASN LYS SEQRES 11 A 198 GLU ARG GLY HIS LEU GLN ILE ALA ALA CYS PRO ASN GLN SEQRES 12 A 198 ASP PRO LEU GLN GLY THR THR GLY LEU ILE PRO LEU LEU SEQRES 13 A 198 GLY ILE ASP VAL ALA GLU HIS ALA TYR TYR LEU GLN TYR SEQRES 14 A 198 LYS ASN VAL ARG PRO ASP TYR LEU LYS ALA ILE TRP ASN SEQRES 15 A 198 VAL ILE ASN TRP GLU ASN VAL THR GLU ARG TYR MET ALA SEQRES 16 A 198 CYS LYS LYS SEQRES 1 B 198 LYS HIS SER LEU PRO ASP LEU PRO TYR ASP TYR GLY ALA SEQRES 2 B 198 LEU GLU PRO HIS ILE ASN ALA GLN ILE MET GLN LEU HIS SEQRES 3 B 198 HIS SER LYS HIS HIS ALA ALA TYR VAL ASN ASN LEU ASN SEQRES 4 B 198 VAL THR GLU GLU LYS TYR GLN GLU ALA LEU ALA LYS GLY SEQRES 5 B 198 ASP VAL THR ALA GLN ILE ALA LEU GLN PRO ALA LEU LYS SEQRES 6 B 198 PHE ASN GLY GLY GLY HIS ILE ASN HIS SER ILE PHE TRP SEQRES 7 B 198 THR ASN LEU SER PRO ASN GLY GLY GLY GLU PRO LYS GLY SEQRES 8 B 198 GLU LEU LEU GLU ALA ILE LYS ARG ASP PHE GLY SER PHE SEQRES 9 B 198 ASP LYS PHE LYS GLU LYS LEU THR ALA ALA SER VAL GLY SEQRES 10 B 198 VAL GLN GLY SER GLY TRP GLY TRP LEU GLY PHE ASN LYS SEQRES 11 B 198 GLU ARG GLY HIS LEU GLN ILE ALA ALA CYS PRO ASN GLN SEQRES 12 B 198 ASP PRO LEU GLN GLY THR THR GLY LEU ILE PRO LEU LEU SEQRES 13 B 198 GLY ILE ASP VAL ALA GLU HIS ALA TYR TYR LEU GLN TYR SEQRES 14 B 198 LYS ASN VAL ARG PRO ASP TYR LEU LYS ALA ILE TRP ASN SEQRES 15 B 198 VAL ILE ASN TRP GLU ASN VAL THR GLU ARG TYR MET ALA SEQRES 16 B 198 CYS LYS LYS HET MN A 199 1 HET SO4 A 426 5 HET SO4 A 429 5 HET MN B 199 1 HET SO4 B 427 5 HET SO4 B 428 5 HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION FORMUL 3 MN 2(MN 2+) FORMUL 4 SO4 4(O4 S 2-) FORMUL 9 HOH *358(H2 O) HELIX 1 1 ASP A 10 GLU A 15 5 6 HELIX 2 2 ASN A 19 LYS A 29 1 11 HELIX 3 3 LYS A 29 LYS A 51 1 23 HELIX 4 4 ASP A 53 LEU A 60 1 8 HELIX 5 5 LEU A 60 ASN A 80 1 21 HELIX 6 6 LYS A 90 GLY A 102 1 13 HELIX 7 7 SER A 103 GLY A 117 1 15 HELIX 8 8 PRO A 145 GLY A 151 1 7 HELIX 9 9 ALA A 161 ALA A 164 5 4 HELIX 10 10 TYR A 165 LYS A 170 1 6 HELIX 11 11 VAL A 172 TRP A 181 1 10 HELIX 12 12 ASN A 185 CYS A 196 1 12 HELIX 13 13 ASN B 19 LYS B 29 1 11 HELIX 14 14 LYS B 29 GLY B 52 1 24 HELIX 15 15 ASP B 53 LEU B 60 1 8 HELIX 16 16 LEU B 60 ASN B 80 1 21 HELIX 17 17 LYS B 90 PHE B 101 1 12 HELIX 18 18 SER B 103 VAL B 118 1 16 HELIX 19 19 PRO B 145 GLY B 151 1 7 HELIX 20 20 ALA B 161 ALA B 164 5 4 HELIX 21 21 TYR B 165 LYS B 170 1 6 HELIX 22 22 VAL B 172 TRP B 181 1 10 HELIX 23 23 ASN B 185 LYS B 197 1 13 SHEET 1 A 3 HIS A 134 PRO A 141 0 SHEET 2 A 3 GLY A 122 ASN A 129 -1 N TRP A 123 O CYS A 140 SHEET 3 A 3 ILE A 153 ASP A 159 -1 N ILE A 153 O PHE A 128 SHEET 1 B 3 HIS B 134 PRO B 141 0 SHEET 2 B 3 GLY B 122 ASN B 129 -1 N TRP B 123 O CYS B 140 SHEET 3 B 3 ILE B 153 ASP B 159 -1 N ILE B 153 O PHE B 128 LINK NE2 HIS A 26 MN MN A 199 1555 1555 2.28 LINK NE2 HIS A 74 MN MN A 199 1555 1555 2.06 LINK OD1 ASP A 159 MN MN A 199 1555 1555 1.98 LINK NE2 HIS A 163 MN MN A 199 1555 1555 2.05 LINK MN MN A 199 O HOH A 430 1555 1555 2.13 LINK NE2 HIS B 26 MN MN B 199 1555 1555 2.22 LINK NE2 HIS B 74 MN MN B 199 1555 1555 2.16 LINK OD2 ASP B 159 MN MN B 199 1555 1555 1.98 LINK NE2 HIS B 163 MN MN B 199 1555 1555 2.21 LINK MN MN B 199 O HOH B 429 1555 1555 2.15 CISPEP 1 GLU A 15 PRO A 16 0 -2.61 CISPEP 2 GLU B 15 PRO B 16 0 0.42 SITE 1 AC1 5 HIS A 26 HIS A 74 ASP A 159 HIS A 163 SITE 2 AC1 5 HOH A 430 SITE 1 AC2 5 HIS B 26 HIS B 74 ASP B 159 HIS B 163 SITE 2 AC2 5 HOH B 429 SITE 1 AC3 4 HIS A 2 SER A 3 HIS A 71 HOH A 577 SITE 1 AC4 5 HIS B 2 SER B 3 HIS B 71 HOH B 476 SITE 2 AC4 5 HOH B 593 SITE 1 AC5 9 HIS B 30 TYR B 34 PHE B 66 GLU B 162 SITE 2 AC5 9 HIS B 163 HOH B 457 HOH B 473 HOH B 495 SITE 3 AC5 9 HOH B 498 SITE 1 AC6 9 HIS A 30 TYR A 34 PHE A 66 GLU A 162 SITE 2 AC6 9 HIS A 163 HOH A 454 HOH A 461 HOH A 589 SITE 3 AC6 9 HOH A 597 CRYST1 79.608 79.608 240.101 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012562 0.007252 0.000000 0.00000 SCALE2 0.000000 0.014505 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004165 0.00000