HEADER TRANSFERASE/HYDROLASE 01-JUN-01 1JB1 TITLE LACTOBACILLUS CASEI HPRK/P BOUND TO PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HPRK PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINUS (RESIDUES 128-319); COMPND 5 EC: 2.7.1.-, 3.1.3.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS CASEI; SOURCE 3 ORGANISM_TAXID: 1582; SOURCE 4 GENE: PTSK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: NM522; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS CATABOLITE REPRESSION, HPR PHOSPHORYLATION, LACTOBACILLUS CASEI, P- KEYWDS 2 LOOP, PROTEIN KINASE, HEXAMER, TRANSFERASE-HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.FIEULAINE,S.MORERA,S.PONCET,V.MONEDERO,V.GUEGUEN-CHAIGNON, AUTHOR 2 A.GALINIER,J.JANIN,J.DEUTSCHER,S.NESSLER REVDAT 5 06-NOV-24 1JB1 1 REMARK SEQADV LINK REVDAT 4 04-OCT-17 1JB1 1 REMARK REVDAT 3 24-FEB-09 1JB1 1 VERSN REVDAT 2 01-NOV-05 1JB1 1 JRNL REMARK MASTER REVDAT 1 08-AUG-01 1JB1 0 JRNL AUTH S.FIEULAINE,S.MORERA,S.PONCET,V.MONEDERO,V.GUEGUEN-CHAIGNON, JRNL AUTH 2 A.GALINIER,J.JANIN,J.DEUTSCHER,S.NESSLER JRNL TITL X-RAY STRUCTURE OF HPR KINASE: A BACTERIAL PROTEIN KINASE JRNL TITL 2 WITH A P-LOOP NUCLEOTIDE-BINDING DOMAIN. JRNL REF EMBO J. V. 20 3917 2001 JRNL REFN ISSN 0261-4189 JRNL PMID 11483495 JRNL DOI 10.1093/EMBOJ/20.15.3917 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 5892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 335 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1181 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 50 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 3.050 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JB1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1000013572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-00; 23-SEP-00 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ESRF; ESRF REMARK 200 BEAMLINE : ID14-4; ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9393, 0.9792, 0.9790; 0.9393 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) OR REMARK 200 SI(311); NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5892 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : 0.05100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.42600 REMARK 200 R SYM FOR SHELL (I) : 0.42600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MADSYS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM PHOSPHATE, SODIUM CITRATE, PH REMARK 280 5.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.24900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.24900 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.24900 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.24900 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 33.24900 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 33.24900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -176.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 107.73800 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 53.86900 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 93.30384 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 53.86900 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 93.30384 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 33.24900 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 107.73800 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 33.24900 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 33.24900 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 439 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 115 REMARK 465 ARG A 116 REMARK 465 GLY A 117 REMARK 465 SER A 118 REMARK 465 HIS A 119 REMARK 465 HIS A 120 REMARK 465 HIS A 121 REMARK 465 HIS A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 GLY A 125 REMARK 465 SER A 126 REMARK 465 MSE A 127 REMARK 465 TYR A 128 REMARK 465 LEU A 129 REMARK 465 ASP A 130 REMARK 465 SER A 131 REMARK 465 GLN A 132 REMARK 465 LEU A 133 REMARK 465 ALA A 134 REMARK 465 LYS A 241 REMARK 465 THR A 242 REMARK 465 PHE A 243 REMARK 465 ASP A 244 REMARK 465 ARG A 245 REMARK 465 LEU A 246 REMARK 465 GLY A 247 REMARK 465 SER A 248 REMARK 465 GLY A 249 REMARK 465 GLU A 250 REMARK 465 GLN A 251 REMARK 465 THR A 252 REMARK 465 ASN A 308 REMARK 465 GLU A 309 REMARK 465 GLU A 310 REMARK 465 THR A 311 REMARK 465 ASP A 312 REMARK 465 GLN A 313 REMARK 465 ASN A 314 REMARK 465 SER A 315 REMARK 465 SER A 316 REMARK 465 GLY A 317 REMARK 465 ASP A 318 REMARK 465 LYS A 319 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 140 CG ND1 CD2 CE1 NE2 REMARK 470 TYR A 184 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 204 CG CD OE1 OE2 REMARK 470 ARG A 206 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 239 CG CD REMARK 470 ASP A 240 CG OD1 OD2 REMARK 470 LEU A 254 CG CD1 CD2 REMARK 470 PHE A 256 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 257 CG OD1 OD2 REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 ARG A 271 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 298 CG CD OE1 OE2 REMARK 470 HIS A 307 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 156 130.51 -35.13 REMARK 500 ASP A 179 -44.80 72.72 REMARK 500 ASP A 187 -156.25 -110.78 REMARK 500 ARG A 206 105.49 -44.64 REMARK 500 GLU A 235 -149.24 -116.03 REMARK 500 ASN A 236 -89.37 -130.96 REMARK 500 THR A 238 -129.90 -170.98 REMARK 500 LEU A 254 -168.68 -71.21 REMARK 500 ILE A 255 -167.06 -162.26 REMARK 500 ASP A 257 70.80 -6.95 REMARK 500 VAL A 258 48.07 104.97 REMARK 500 PRO A 259 84.23 23.03 REMARK 500 PRO A 261 130.75 -37.01 REMARK 500 VAL A 269 139.65 -37.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 400 DBREF 1JB1 A 128 319 UNP Q9RE09 HPRK_LACCA 128 319 SEQADV 1JB1 MSE A 115 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 ARG A 116 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 GLY A 117 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 SER A 118 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 HIS A 119 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 HIS A 120 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 HIS A 121 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 HIS A 122 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 HIS A 123 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 HIS A 124 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 GLY A 125 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 SER A 126 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 MSE A 127 UNP Q9RE09 EXPRESSION TAG SEQADV 1JB1 MSE A 139 UNP Q9RE09 MET 139 MODIFIED RESIDUE SEQADV 1JB1 MSE A 214 UNP Q9RE09 MET 214 MODIFIED RESIDUE SEQADV 1JB1 MSE A 282 UNP Q9RE09 MET 282 MODIFIED RESIDUE SEQADV 1JB1 MSE A 289 UNP Q9RE09 MET 289 MODIFIED RESIDUE SEQRES 1 A 205 MSE ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MSE SEQRES 2 A 205 TYR LEU ASP SER GLN LEU ALA GLU ARG ARG SER MSE HIS SEQRES 3 A 205 GLY VAL LEU VAL ASP ILE TYR GLY LEU GLY VAL LEU ILE SEQRES 4 A 205 THR GLY ASP SER GLY VAL GLY LYS SER GLU THR ALA LEU SEQRES 5 A 205 GLU LEU VAL GLN ARG GLY HIS ARG LEU ILE ALA ASP ASP SEQRES 6 A 205 ARG VAL ASP VAL TYR GLN GLN ASP GLU GLN THR ILE VAL SEQRES 7 A 205 GLY ALA ALA PRO PRO ILE LEU SER HIS LEU LEU GLU ILE SEQRES 8 A 205 ARG GLY LEU GLY ILE ILE ASP VAL MSE ASN LEU PHE GLY SEQRES 9 A 205 ALA GLY ALA VAL ARG GLU ASP THR THR ILE SER LEU ILE SEQRES 10 A 205 VAL HIS LEU GLU ASN TRP THR PRO ASP LYS THR PHE ASP SEQRES 11 A 205 ARG LEU GLY SER GLY GLU GLN THR GLN LEU ILE PHE ASP SEQRES 12 A 205 VAL PRO VAL PRO LYS ILE THR VAL PRO VAL LYS VAL GLY SEQRES 13 A 205 ARG ASN LEU ALA ILE ILE ILE GLU VAL ALA ALA MSE ASN SEQRES 14 A 205 PHE ARG ALA LYS SER MSE GLY TYR ASP ALA THR LYS THR SEQRES 15 A 205 PHE GLU LYS ASN LEU ASN HIS LEU ILE GLU HIS ASN GLU SEQRES 16 A 205 GLU THR ASP GLN ASN SER SER GLY ASP LYS MODRES 1JB1 MSE A 139 MET SELENOMETHIONINE MODRES 1JB1 MSE A 214 MET SELENOMETHIONINE MODRES 1JB1 MSE A 282 MET SELENOMETHIONINE MODRES 1JB1 MSE A 289 MET SELENOMETHIONINE HET MSE A 139 8 HET MSE A 214 8 HET MSE A 282 8 HET MSE A 289 8 HET PO4 A 400 5 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 PO4 O4 P 3- FORMUL 3 HOH *50(H2 O) HELIX 1 1 GLY A 160 ARG A 171 1 12 HELIX 2 2 PRO A 196 SER A 200 5 5 HELIX 3 3 VAL A 213 GLY A 218 1 6 HELIX 4 4 ALA A 219 ALA A 221 5 3 HELIX 5 5 ASN A 272 MSE A 289 1 18 HELIX 6 6 ASP A 292 GLU A 306 1 15 SHEET 1 A 4 ARG A 137 HIS A 140 0 SHEET 2 A 4 ARG A 180 VAL A 183 -1 N VAL A 181 O MSE A 139 SHEET 3 A 4 VAL A 192 ALA A 194 -1 O ALA A 194 N ASP A 182 SHEET 4 A 4 ASP A 225 THR A 227 -1 O THR A 226 N GLY A 193 SHEET 1 B 5 ARG A 174 ALA A 177 0 SHEET 2 B 5 VAL A 142 ILE A 146 -1 N LEU A 143 O ALA A 177 SHEET 3 B 5 LEU A 149 THR A 154 -1 O LEU A 149 N ILE A 146 SHEET 4 B 5 LEU A 230 GLU A 235 1 O LEU A 230 N LEU A 152 SHEET 5 B 5 LYS A 262 PRO A 266 1 O ILE A 263 N HIS A 233 SHEET 1 C 2 LEU A 202 ILE A 205 0 SHEET 2 C 2 GLY A 209 ASP A 212 -1 N GLY A 209 O ILE A 205 LINK C SER A 138 N MSE A 139 1555 1555 1.33 LINK C MSE A 139 N HIS A 140 1555 1555 1.33 LINK C VAL A 213 N MSE A 214 1555 1555 1.32 LINK C MSE A 214 N ASN A 215 1555 1555 1.33 LINK C ALA A 281 N MSE A 282 1555 1555 1.33 LINK C MSE A 282 N ASN A 283 1555 1555 1.32 LINK C SER A 288 N MSE A 289 1555 1555 1.33 LINK C MSE A 289 N GLY A 290 1555 1555 1.33 SITE 1 AC1 7 SER A 157 GLY A 158 VAL A 159 GLY A 160 SITE 2 AC1 7 LYS A 161 SER A 162 GLU A 163 CRYST1 107.738 107.738 66.498 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009282 0.005359 0.000000 0.00000 SCALE2 0.000000 0.010718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015038 0.00000