HEADER LYASE 03-APR-99 1JBA TITLE UNMYRISTOYLATED GCAP-2 WITH THREE CALCIUM IONS BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (GUANYLATE CYCLASE ACTIVATING PROTEIN 2); COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GCAP-2; COMPND 5 EC: 4.6.1.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 TISSUE: RETINA; SOURCE 6 CELL: ROD; SOURCE 7 CELLULAR_LOCATION: CYTOPLASM; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 11 EXPRESSION_SYSTEM_CELL_LINE: BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET11B KEYWDS EF-HAND, CALCIUM-BINDING PROTEIN, GUANYLYL CYCLASE REGULATION, LYASE EXPDTA SOLUTION NMR NUMMDL 22 AUTHOR J.B.AMES,A.M.DIZHOOR,M.IKURA,K.PALCZEWSKI,L.STRYER REVDAT 5 27-DEC-23 1JBA 1 REMARK REVDAT 4 23-FEB-22 1JBA 1 REMARK LINK REVDAT 3 24-FEB-09 1JBA 1 VERSN REVDAT 2 21-APR-00 1JBA 1 REMARK DBREF REVDAT 1 10-DEC-99 1JBA 0 JRNL AUTH J.B.AMES,A.M.DIZHOOR,M.IKURA,K.PALCZEWSKI,L.STRYER JRNL TITL THREE-DIMENSIONAL STRUCTURE OF GUANYLYL CYCLASE ACTIVATING JRNL TITL 2 PROTEIN-2, A CALCIUM-SENSITIVE MODULATOR OF PHOTORECEPTOR JRNL TITL 3 GUANYLYL CYCLASES. JRNL REF J.BIOL.CHEM. V. 274 19329 1999 JRNL REFN ISSN 0021-9258 JRNL PMID 10383444 JRNL DOI 10.1074/JBC.274.27.19329 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JBA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-APR-99. REMARK 100 THE DEPOSITION ID IS D_1000000783. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 318 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0.1 M REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 95% WATER/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : HNCO; HNCACB; CBCACONH; NOESY; REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 22 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-22 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 191 REMARK 465 SER A 192 REMARK 465 TRP A 193 REMARK 465 ILE A 194 REMARK 465 SER A 195 REMARK 465 GLN A 196 REMARK 465 GLN A 197 REMARK 465 ARG A 198 REMARK 465 ARG A 199 REMARK 465 LYS A 200 REMARK 465 SER A 201 REMARK 465 ALA A 202 REMARK 465 MET A 203 REMARK 465 PHE A 204 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 21 H GLN A 25 1.44 REMARK 500 O LEU A 85 H VAL A 88 1.50 REMARK 500 O LYS A 29 H GLU A 33 1.57 REMARK 500 O LEU A 167 H VAL A 171 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 TRP A 7 CG TRP A 7 CD2 -0.127 REMARK 500 1 TRP A 27 CG TRP A 27 CD2 -0.132 REMARK 500 1 HIS A 43 CG HIS A 43 ND1 -0.121 REMARK 500 1 HIS A 95 CG HIS A 95 ND1 -0.121 REMARK 500 1 TRP A 99 CG TRP A 99 CD2 -0.117 REMARK 500 1 TRP A 179 CG TRP A 179 CD2 -0.113 REMARK 500 2 TRP A 7 CG TRP A 7 CD2 -0.124 REMARK 500 2 TRP A 27 CG TRP A 27 CD2 -0.125 REMARK 500 2 HIS A 43 CG HIS A 43 ND1 -0.120 REMARK 500 2 HIS A 95 CG HIS A 95 ND1 -0.119 REMARK 500 2 TRP A 99 CG TRP A 99 CD2 -0.125 REMARK 500 2 TRP A 179 CG TRP A 179 CD2 -0.116 REMARK 500 3 TRP A 7 CG TRP A 7 CD2 -0.114 REMARK 500 3 TRP A 27 CG TRP A 27 CD2 -0.126 REMARK 500 3 HIS A 43 CG HIS A 43 ND1 -0.122 REMARK 500 3 HIS A 95 CG HIS A 95 ND1 -0.124 REMARK 500 3 TRP A 99 CG TRP A 99 CD2 -0.119 REMARK 500 3 TRP A 179 CG TRP A 179 CD2 -0.118 REMARK 500 4 TRP A 7 CG TRP A 7 CD2 -0.125 REMARK 500 4 TRP A 27 CG TRP A 27 CD2 -0.128 REMARK 500 4 HIS A 43 CG HIS A 43 ND1 -0.121 REMARK 500 4 HIS A 95 CG HIS A 95 ND1 -0.124 REMARK 500 4 TRP A 99 CG TRP A 99 CD2 -0.123 REMARK 500 4 TRP A 179 CG TRP A 179 CD2 -0.121 REMARK 500 5 TRP A 7 CG TRP A 7 CD2 -0.124 REMARK 500 5 TRP A 27 CG TRP A 27 CD2 -0.125 REMARK 500 5 HIS A 43 CG HIS A 43 ND1 -0.120 REMARK 500 5 HIS A 95 CG HIS A 95 ND1 -0.121 REMARK 500 5 TRP A 99 CG TRP A 99 CD2 -0.127 REMARK 500 5 TRP A 179 CG TRP A 179 CD2 -0.116 REMARK 500 6 TRP A 7 CG TRP A 7 CD2 -0.134 REMARK 500 6 TRP A 27 CG TRP A 27 CD2 -0.131 REMARK 500 6 HIS A 43 CG HIS A 43 ND1 -0.120 REMARK 500 6 HIS A 95 CG HIS A 95 ND1 -0.120 REMARK 500 6 TRP A 99 CG TRP A 99 CD2 -0.116 REMARK 500 6 TRP A 179 CG TRP A 179 CD2 -0.110 REMARK 500 7 TRP A 7 CG TRP A 7 CD2 -0.129 REMARK 500 7 TRP A 27 CG TRP A 27 CD2 -0.128 REMARK 500 7 HIS A 43 CG HIS A 43 ND1 -0.122 REMARK 500 7 HIS A 95 CG HIS A 95 ND1 -0.121 REMARK 500 7 TRP A 99 CG TRP A 99 CD2 -0.116 REMARK 500 7 TRP A 179 CG TRP A 179 CD2 -0.117 REMARK 500 8 TRP A 7 CG TRP A 7 CD2 -0.137 REMARK 500 8 TRP A 27 CG TRP A 27 CD2 -0.130 REMARK 500 8 HIS A 43 CG HIS A 43 ND1 -0.122 REMARK 500 8 HIS A 95 CG HIS A 95 ND1 -0.123 REMARK 500 8 TRP A 99 CG TRP A 99 CD2 -0.120 REMARK 500 8 TRP A 179 CG TRP A 179 CD2 -0.112 REMARK 500 9 TRP A 7 CG TRP A 7 CD2 -0.114 REMARK 500 9 TRP A 27 CG TRP A 27 CD2 -0.127 REMARK 500 REMARK 500 THIS ENTRY HAS 132 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 TRP A 7 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 1 TRP A 7 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 1 TRP A 7 NE1 - CE2 - CZ2 ANGL. DEV. = 9.9 DEGREES REMARK 500 1 TRP A 7 NE1 - CE2 - CD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 1 TRP A 27 CD1 - CG - CD2 ANGL. DEV. = 5.0 DEGREES REMARK 500 1 TRP A 27 CG - CD1 - NE1 ANGL. DEV. = -6.8 DEGREES REMARK 500 1 TRP A 27 NE1 - CE2 - CZ2 ANGL. DEV. = 10.9 DEGREES REMARK 500 1 TRP A 27 NE1 - CE2 - CD2 ANGL. DEV. = -8.0 DEGREES REMARK 500 1 TRP A 27 CE2 - CD2 - CG ANGL. DEV. = 4.9 DEGREES REMARK 500 1 TRP A 27 CG - CD2 - CE3 ANGL. DEV. = -6.6 DEGREES REMARK 500 1 TRP A 99 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 1 TRP A 99 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 1 TRP A 99 NE1 - CE2 - CZ2 ANGL. DEV. = 9.5 DEGREES REMARK 500 1 TRP A 99 NE1 - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 1 TRP A 179 CD1 - CG - CD2 ANGL. DEV. = 4.8 DEGREES REMARK 500 1 TRP A 179 CG - CD1 - NE1 ANGL. DEV. = -6.3 DEGREES REMARK 500 1 TRP A 179 NE1 - CE2 - CZ2 ANGL. DEV. = 9.1 DEGREES REMARK 500 1 TRP A 179 NE1 - CE2 - CD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 2 TRP A 7 CD1 - CG - CD2 ANGL. DEV. = 4.8 DEGREES REMARK 500 2 TRP A 7 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 2 TRP A 7 NE1 - CE2 - CZ2 ANGL. DEV. = 9.8 DEGREES REMARK 500 2 TRP A 7 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 2 TRP A 27 CG - CD1 - NE1 ANGL. DEV. = -6.7 DEGREES REMARK 500 2 TRP A 27 NE1 - CE2 - CZ2 ANGL. DEV. = 10.1 DEGREES REMARK 500 2 TRP A 27 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 2 TRP A 27 CG - CD2 - CE3 ANGL. DEV. = -6.1 DEGREES REMARK 500 2 TRP A 99 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 2 TRP A 99 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 2 TRP A 99 NE1 - CE2 - CZ2 ANGL. DEV. = 9.6 DEGREES REMARK 500 2 TRP A 99 NE1 - CE2 - CD2 ANGL. DEV. = -7.4 DEGREES REMARK 500 2 TRP A 179 CG - CD1 - NE1 ANGL. DEV. = -6.3 DEGREES REMARK 500 2 TRP A 179 NE1 - CE2 - CZ2 ANGL. DEV. = 9.5 DEGREES REMARK 500 2 TRP A 179 NE1 - CE2 - CD2 ANGL. DEV. = -7.4 DEGREES REMARK 500 3 TRP A 7 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 3 TRP A 7 CG - CD1 - NE1 ANGL. DEV. = -6.3 DEGREES REMARK 500 3 TRP A 7 NE1 - CE2 - CZ2 ANGL. DEV. = 9.3 DEGREES REMARK 500 3 TRP A 7 NE1 - CE2 - CD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 3 TRP A 27 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 3 TRP A 27 CG - CD1 - NE1 ANGL. DEV. = -6.6 DEGREES REMARK 500 3 TRP A 27 NE1 - CE2 - CZ2 ANGL. DEV. = 9.7 DEGREES REMARK 500 3 TRP A 27 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 3 TRP A 99 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 3 TRP A 99 CG - CD1 - NE1 ANGL. DEV. = -6.3 DEGREES REMARK 500 3 TRP A 99 NE1 - CE2 - CZ2 ANGL. DEV. = 9.6 DEGREES REMARK 500 3 TRP A 99 NE1 - CE2 - CD2 ANGL. DEV. = -7.4 DEGREES REMARK 500 3 TRP A 179 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 3 TRP A 179 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 3 TRP A 179 NE1 - CE2 - CZ2 ANGL. DEV. = 9.4 DEGREES REMARK 500 3 TRP A 179 NE1 - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 4 TRP A 7 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 356 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 3 -135.40 48.28 REMARK 500 1 GLN A 4 -158.09 -151.78 REMARK 500 1 SER A 6 -159.60 -166.74 REMARK 500 1 GLU A 12 -76.69 -75.80 REMARK 500 1 ALA A 15 33.38 -151.26 REMARK 500 1 VAL A 16 -120.19 44.01 REMARK 500 1 ALA A 18 168.38 60.36 REMARK 500 1 ASP A 20 -79.62 -64.64 REMARK 500 1 CYS A 35 102.01 -163.73 REMARK 500 1 ARG A 47 -74.06 -75.07 REMARK 500 1 PHE A 48 -9.39 -46.71 REMARK 500 1 PHE A 49 -74.79 -99.57 REMARK 500 1 VAL A 51 66.24 20.04 REMARK 500 1 PRO A 52 -164.36 -66.22 REMARK 500 1 ASP A 53 -59.12 -132.10 REMARK 500 1 GLU A 55 -34.27 68.88 REMARK 500 1 ALA A 57 32.97 -73.47 REMARK 500 1 ASN A 74 -13.73 63.42 REMARK 500 1 LEU A 79 -70.08 -43.77 REMARK 500 1 VAL A 88 -60.09 -136.79 REMARK 500 1 LEU A 89 -77.33 -40.09 REMARK 500 1 ASP A 105 81.59 -59.04 REMARK 500 1 ARG A 108 86.73 49.87 REMARK 500 1 ASN A 109 -18.59 -147.58 REMARK 500 1 ARG A 114 -13.40 -46.26 REMARK 500 1 CYS A 131 -154.36 -82.99 REMARK 500 1 SER A 132 30.50 -90.12 REMARK 500 1 VAL A 135 31.62 36.55 REMARK 500 1 GLU A 136 73.83 -8.21 REMARK 500 1 ALA A 137 -63.17 -14.65 REMARK 500 1 GLU A 138 -104.17 -54.82 REMARK 500 1 GLN A 139 85.52 -54.63 REMARK 500 1 GLN A 140 0.20 -173.56 REMARK 500 1 LYS A 142 105.15 62.25 REMARK 500 1 GLU A 159 -31.04 -171.72 REMARK 500 1 ARG A 176 -59.28 -158.31 REMARK 500 1 ASP A 177 -145.17 49.66 REMARK 500 1 TRP A 179 -7.48 -167.67 REMARK 500 1 MET A 183 -81.17 -60.76 REMARK 500 1 LEU A 184 -33.20 -39.34 REMARK 500 1 MET A 186 -73.25 69.18 REMARK 500 1 LEU A 188 -50.61 78.60 REMARK 500 1 ASN A 189 -51.13 176.88 REMARK 500 2 GLN A 3 29.83 -150.27 REMARK 500 2 TRP A 7 -130.12 -110.05 REMARK 500 2 GLU A 9 -85.12 -44.51 REMARK 500 2 ALA A 19 -62.54 -148.07 REMARK 500 2 ASP A 20 -74.07 -57.47 REMARK 500 2 GLU A 33 -35.30 66.75 REMARK 500 2 GLU A 34 14.33 -165.31 REMARK 500 REMARK 500 THIS ENTRY HAS 960 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 47 0.16 SIDE CHAIN REMARK 500 1 ARG A 66 0.32 SIDE CHAIN REMARK 500 1 ARG A 90 0.12 SIDE CHAIN REMARK 500 1 ARG A 108 0.32 SIDE CHAIN REMARK 500 1 ARG A 114 0.29 SIDE CHAIN REMARK 500 1 ARG A 152 0.17 SIDE CHAIN REMARK 500 1 ARG A 175 0.29 SIDE CHAIN REMARK 500 1 ARG A 176 0.09 SIDE CHAIN REMARK 500 2 ARG A 47 0.25 SIDE CHAIN REMARK 500 2 ARG A 66 0.23 SIDE CHAIN REMARK 500 2 ARG A 90 0.20 SIDE CHAIN REMARK 500 2 ARG A 108 0.32 SIDE CHAIN REMARK 500 2 ARG A 114 0.11 SIDE CHAIN REMARK 500 2 ARG A 152 0.32 SIDE CHAIN REMARK 500 2 ARG A 175 0.20 SIDE CHAIN REMARK 500 2 ARG A 176 0.29 SIDE CHAIN REMARK 500 3 ARG A 66 0.32 SIDE CHAIN REMARK 500 3 ARG A 90 0.31 SIDE CHAIN REMARK 500 3 ARG A 108 0.21 SIDE CHAIN REMARK 500 3 ARG A 114 0.30 SIDE CHAIN REMARK 500 3 ARG A 152 0.14 SIDE CHAIN REMARK 500 3 ARG A 175 0.17 SIDE CHAIN REMARK 500 3 ARG A 176 0.18 SIDE CHAIN REMARK 500 4 ARG A 47 0.26 SIDE CHAIN REMARK 500 4 ARG A 66 0.32 SIDE CHAIN REMARK 500 4 ARG A 90 0.27 SIDE CHAIN REMARK 500 4 ARG A 108 0.25 SIDE CHAIN REMARK 500 4 ARG A 114 0.24 SIDE CHAIN REMARK 500 4 ARG A 152 0.18 SIDE CHAIN REMARK 500 4 ARG A 175 0.15 SIDE CHAIN REMARK 500 4 ARG A 176 0.29 SIDE CHAIN REMARK 500 5 ARG A 47 0.31 SIDE CHAIN REMARK 500 5 ARG A 66 0.32 SIDE CHAIN REMARK 500 5 ARG A 90 0.10 SIDE CHAIN REMARK 500 5 ARG A 114 0.16 SIDE CHAIN REMARK 500 5 ARG A 152 0.32 SIDE CHAIN REMARK 500 5 ARG A 175 0.26 SIDE CHAIN REMARK 500 5 ARG A 176 0.32 SIDE CHAIN REMARK 500 6 ARG A 47 0.32 SIDE CHAIN REMARK 500 6 ARG A 66 0.30 SIDE CHAIN REMARK 500 6 ARG A 90 0.13 SIDE CHAIN REMARK 500 6 ARG A 108 0.32 SIDE CHAIN REMARK 500 6 ARG A 114 0.28 SIDE CHAIN REMARK 500 6 ARG A 152 0.28 SIDE CHAIN REMARK 500 6 ARG A 175 0.20 SIDE CHAIN REMARK 500 6 ARG A 176 0.25 SIDE CHAIN REMARK 500 7 ARG A 47 0.32 SIDE CHAIN REMARK 500 7 ARG A 66 0.29 SIDE CHAIN REMARK 500 7 ARG A 90 0.32 SIDE CHAIN REMARK 500 7 ARG A 108 0.31 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 162 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 500 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 69 OD1 REMARK 620 2 ASN A 71 OD1 121.7 REMARK 620 3 ASP A 73 OD2 134.3 94.3 REMARK 620 4 THR A 75 O 80.6 157.6 67.5 REMARK 620 5 GLU A 80 OE1 64.3 63.3 157.6 134.4 REMARK 620 6 GLU A 80 OE2 100.8 63.2 121.4 114.2 51.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 105 OD1 REMARK 620 2 ASP A 107 OD1 69.6 REMARK 620 3 ASN A 109 OD1 80.7 69.0 REMARK 620 4 CYS A 111 O 144.7 113.9 69.3 REMARK 620 5 GLU A 116 OE1 111.9 110.9 166.9 99.8 REMARK 620 6 GLU A 116 OE2 138.7 81.4 116.1 73.8 52.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 158 OD2 REMARK 620 2 ASN A 160 OD1 76.8 REMARK 620 3 ASP A 162 OD1 95.8 85.5 REMARK 620 4 ASP A 162 OD2 147.7 114.7 57.4 REMARK 620 5 GLN A 164 O 101.7 168.7 83.6 60.9 REMARK 620 6 GLU A 169 OE1 89.6 126.0 148.4 104.5 64.9 REMARK 620 7 GLU A 169 OE2 100.8 79.5 154.3 110.8 111.7 51.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 502 DBREF 1JBA A 1 204 UNP P51177 GUC1B_BOVIN 1 204 SEQRES 1 A 204 MET GLY GLN GLN PHE SER TRP GLU GLU ALA GLU GLU ASN SEQRES 2 A 204 GLY ALA VAL GLY ALA ALA ASP ALA ALA GLN LEU GLN GLU SEQRES 3 A 204 TRP TYR LYS LYS PHE LEU GLU GLU CYS PRO SER GLY THR SEQRES 4 A 204 LEU PHE MET HIS GLU PHE LYS ARG PHE PHE LYS VAL PRO SEQRES 5 A 204 ASP ASN GLU GLU ALA THR GLN TYR VAL GLU ALA MET PHE SEQRES 6 A 204 ARG ALA PHE ASP THR ASN GLY ASP ASN THR ILE ASP PHE SEQRES 7 A 204 LEU GLU TYR VAL ALA ALA LEU ASN LEU VAL LEU ARG GLY SEQRES 8 A 204 THR LEU GLU HIS LYS LEU LYS TRP THR PHE LYS ILE TYR SEQRES 9 A 204 ASP LYS ASP ARG ASN GLY CYS ILE ASP ARG GLN GLU LEU SEQRES 10 A 204 LEU ASP ILE VAL GLU SER ILE TYR LYS LEU LYS LYS ALA SEQRES 11 A 204 CYS SER VAL GLU VAL GLU ALA GLU GLN GLN GLY LYS LEU SEQRES 12 A 204 LEU THR PRO GLU GLU VAL VAL ASP ARG ILE PHE LEU LEU SEQRES 13 A 204 VAL ASP GLU ASN GLY ASP GLY GLN LEU SER LEU ASN GLU SEQRES 14 A 204 PHE VAL GLU GLY ALA ARG ARG ASP LYS TRP VAL MET LYS SEQRES 15 A 204 MET LEU GLN MET ASP LEU ASN PRO SER SER TRP ILE SER SEQRES 16 A 204 GLN GLN ARG ARG LYS SER ALA MET PHE HET CA A 500 1 HET CA A 501 1 HET CA A 502 1 HETNAM CA CALCIUM ION FORMUL 2 CA 3(CA 2+) HELIX 1 H1 TRP A 7 ASN A 13 1 7 HELIX 2 H2 ALA A 21 LEU A 32 1 12 HELIX 3 H3 MET A 42 VAL A 88 1 47 HELIX 4 H5 PHE A 78 VAL A 88 1 11 HELIX 5 H6 LYS A 96 TYR A 104 1 9 HELIX 6 H7 ARG A 114 LEU A 127 1 14 HELIX 7 H8 GLU A 147 LEU A 156 1 10 HELIX 8 H9 LEU A 167 ARG A 176 1 10 HELIX 9 H10 TRP A 179 ASN A 189 1 11 SHEET 1 S1 1 THR A 39 PHE A 41 0 SHEET 1 S2 1 THR A 75 ASP A 77 0 SHEET 1 S3 1 CYS A 111 ASP A 113 0 SHEET 1 S4 1 GLN A 164 SER A 166 0 LINK OD1 ASP A 69 CA CA A 500 1555 1555 2.48 LINK OD1 ASN A 71 CA CA A 500 1555 1555 2.48 LINK OD2 ASP A 73 CA CA A 500 1555 1555 2.54 LINK O THR A 75 CA CA A 500 1555 1555 2.50 LINK OE1 GLU A 80 CA CA A 500 1555 1555 2.53 LINK OE2 GLU A 80 CA CA A 500 1555 1555 2.51 LINK OD1 ASP A 105 CA CA A 501 1555 1555 2.50 LINK OD1 ASP A 107 CA CA A 501 1555 1555 2.50 LINK OD1 ASN A 109 CA CA A 501 1555 1555 2.46 LINK O CYS A 111 CA CA A 501 1555 1555 2.52 LINK OE1 GLU A 116 CA CA A 501 1555 1555 2.48 LINK OE2 GLU A 116 CA CA A 501 1555 1555 2.50 LINK OD2 ASP A 158 CA CA A 502 1555 1555 2.50 LINK OD1 ASN A 160 CA CA A 502 1555 1555 2.49 LINK OD1 ASP A 162 CA CA A 502 1555 1555 1.84 LINK OD2 ASP A 162 CA CA A 502 1555 1555 2.53 LINK O GLN A 164 CA CA A 502 1555 1555 2.49 LINK OE1 GLU A 169 CA CA A 502 1555 1555 2.49 LINK OE2 GLU A 169 CA CA A 502 1555 1555 2.52 SITE 1 AC1 5 ASP A 69 ASN A 71 ASP A 73 THR A 75 SITE 2 AC1 5 GLU A 80 SITE 1 AC2 5 ASP A 105 ASP A 107 ASN A 109 CYS A 111 SITE 2 AC2 5 GLU A 116 SITE 1 AC3 5 ASP A 158 ASN A 160 ASP A 162 GLN A 164 SITE 2 AC3 5 GLU A 169 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1