data_1JBL # _entry.id 1JBL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1JBL pdb_00001jbl 10.2210/pdb1jbl/pdb RCSB RCSB013590 ? ? WWPDB D_1000013590 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-08-22 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2015-04-15 5 'Structure model' 1 4 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_entry_details 5 5 'Structure model' pdbx_modification_feature 6 5 'Structure model' pdbx_nmr_software 7 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_nmr_software.name' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1JBL _pdbx_database_status.recvd_initial_deposition_date 2001-06-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1JBN _pdbx_database_related.details '1JBN contains the same protein linearized at the D14-G1 peptide bond' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Korsinczky, M.L.J.' 1 'Schirra, H.J.' 2 'Rosengren, K.J.' 3 'West, J.' 4 'Condie, B.A.' 5 'Otvos, L.' 6 'Anderson, M.A.' 7 'Craik, D.J.' 8 # _citation.id primary _citation.title 'Solution structures by 1H NMR of the novel cyclic trypsin inhibitor SFTI-1 from sunflower seeds and an acyclic permutant.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 311 _citation.page_first 579 _citation.page_last 591 _citation.year 2001 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11493011 _citation.pdbx_database_id_DOI 10.1006/jmbi.2001.4887 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Korsinczky, M.L.' 1 ? primary 'Schirra, H.J.' 2 ? primary 'Rosengren, K.J.' 3 ? primary 'West, J.' 4 ? primary 'Condie, B.A.' 5 ? primary 'Otvos, L.' 6 ? primary 'Anderson, M.A.' 7 ? primary 'Craik, D.J.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'CYCLIC TRYPSIN INHIBITOR' _entity.formula_weight 1535.829 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name SFTI-1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GRCTKSIPPICFPD _entity_poly.pdbx_seq_one_letter_code_can GRCTKSIPPICFPD _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ARG n 1 3 CYS n 1 4 THR n 1 5 LYS n 1 6 SER n 1 7 ILE n 1 8 PRO n 1 9 PRO n 1 10 ILE n 1 11 CYS n 1 12 PHE n 1 13 PRO n 1 14 ASP n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'common sunflower' _entity_src_nat.pdbx_organism_scientific 'Helianthus annuus' _entity_src_nat.pdbx_ncbi_taxonomy_id 4232 _entity_src_nat.genus Helianthus _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ASP 14 14 14 ASP ASP A . n # _cell.entry_id 1JBL _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _exptl.entry_id 1JBL _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1JBL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1JBL _struct.title 'Solution structure of SFTI-1, A cyclic trypsin inhibitor from sunflower seeds' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1JBL _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'cyclic backbone, 2 beta strands, 1 disulfide bond, SFTI-1, PROTEIN BINDING' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SFTI1_HELAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession Q4GWU5 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1JBL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 14 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q4GWU5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 14 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 11 SG ? ? A CYS 3 A CYS 11 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale both ? A GLY 1 N ? ? ? 1_555 A ASP 14 C ? ? A GLY 1 A ASP 14 1_555 ? ? ? ? ? ? ? 1.340 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 3 ? CYS A 11 ? CYS A 3 ? 1_555 CYS A 11 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 GLY A 1 ? ASP A 14 ? GLY A 1 ? 1_555 ASP A 14 ? 1_555 N C . . . None 'Non-standard linkage' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 1 -0.44 2 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 2 -0.49 3 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 3 -0.53 4 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 4 -0.35 5 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 5 -0.50 6 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 6 -0.38 7 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 7 -0.40 8 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 8 -0.44 9 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 9 -0.65 10 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 10 -0.62 11 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 11 -0.53 12 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 12 -0.45 13 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 13 -0.78 14 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 14 -0.36 15 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 15 -0.60 16 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 16 -0.53 17 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 17 -0.46 18 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 18 -0.37 19 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 19 -0.61 20 ILE 7 A . ? ILE 7 A PRO 8 A ? PRO 8 A 20 -0.35 # _pdbx_entry_details.entry_id 1JBL _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A ARG 2 ? ? H A PHE 12 ? ? 1.60 2 11 O A ARG 2 ? ? H A PHE 12 ? ? 1.57 3 15 O A ARG 2 ? ? H A PHE 12 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 2 ? ? -49.74 158.76 2 2 LYS A 5 ? ? -85.68 36.99 3 3 LYS A 5 ? ? -83.87 33.05 4 4 LYS A 5 ? ? -83.07 31.33 5 5 LYS A 5 ? ? -84.42 32.95 6 8 LYS A 5 ? ? -89.83 33.77 7 9 LYS A 5 ? ? -84.40 35.76 8 10 LYS A 5 ? ? -81.94 32.11 9 11 LYS A 5 ? ? -83.70 35.78 10 13 ARG A 2 ? ? -49.57 152.53 11 13 LYS A 5 ? ? -86.27 39.61 12 14 LYS A 5 ? ? -88.04 42.98 13 15 LYS A 5 ? ? -85.07 33.16 14 16 LYS A 5 ? ? -84.68 33.83 15 17 LYS A 5 ? ? -83.76 33.02 16 18 LYS A 5 ? ? -82.43 30.42 17 19 LYS A 5 ? ? -82.93 31.57 18 20 LYS A 5 ? ? -89.70 43.25 # _pdbx_molecule_features.prd_id PRD_001097 _pdbx_molecule_features.name 'Trypsin inhibitor 1' _pdbx_molecule_features.type Polypeptide _pdbx_molecule_features.class 'Trypsin inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_001097 _pdbx_molecule.asym_id A # _pdbx_nmr_ensemble.entry_id 1JBL _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '1mM SFTI-1' ;20mM sodium phosphate,pH 4.5, 20% trifluoroethanol, 10% D2O ; 2 '1mM SFTI-1' ;20mM sodium phosphate,pH 4.5, 10% D2O ; 3 '1mM SFTI-1' ;20mM sodium phosphate,pH 4.5, 20% trifluoroethanol, 100% D2O ; # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 273 ambient 4.5 20mM ? K 2 313 ambient 4.5 20mM ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 DQF-COSY 3 3 1 E-COSY # _pdbx_nmr_details.entry_id 1JBL _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques' # _pdbx_nmr_refine.entry_id 1JBL _pdbx_nmr_refine.method ;simulated annealing with refinement using a modified CSDX force field. ; _pdbx_nmr_refine.details ;111 distance constraints, comprising 53 sequential, 18 medium range, 68 long range, 6 chi1 angle constraints 7 phi angle constraints ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 2.6 collection Bruker 1 XwinNMR 2.6 processing Bruker 2 CCNMR ? 'data analysis' 'Cieslar et al.' 3 X-PLOR 3.851 'structure solution' Brunger 4 X-PLOR 3.851 refinement Brunger 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASP N N N N 28 ASP CA C N S 29 ASP C C N N 30 ASP O O N N 31 ASP CB C N N 32 ASP CG C N N 33 ASP OD1 O N N 34 ASP OD2 O N N 35 ASP OXT O N N 36 ASP H H N N 37 ASP H2 H N N 38 ASP HA H N N 39 ASP HB2 H N N 40 ASP HB3 H N N 41 ASP HD2 H N N 42 ASP HXT H N N 43 CYS N N N N 44 CYS CA C N R 45 CYS C C N N 46 CYS O O N N 47 CYS CB C N N 48 CYS SG S N N 49 CYS OXT O N N 50 CYS H H N N 51 CYS H2 H N N 52 CYS HA H N N 53 CYS HB2 H N N 54 CYS HB3 H N N 55 CYS HG H N N 56 CYS HXT H N N 57 GLY N N N N 58 GLY CA C N N 59 GLY C C N N 60 GLY O O N N 61 GLY OXT O N N 62 GLY H H N N 63 GLY H2 H N N 64 GLY HA2 H N N 65 GLY HA3 H N N 66 GLY HXT H N N 67 ILE N N N N 68 ILE CA C N S 69 ILE C C N N 70 ILE O O N N 71 ILE CB C N S 72 ILE CG1 C N N 73 ILE CG2 C N N 74 ILE CD1 C N N 75 ILE OXT O N N 76 ILE H H N N 77 ILE H2 H N N 78 ILE HA H N N 79 ILE HB H N N 80 ILE HG12 H N N 81 ILE HG13 H N N 82 ILE HG21 H N N 83 ILE HG22 H N N 84 ILE HG23 H N N 85 ILE HD11 H N N 86 ILE HD12 H N N 87 ILE HD13 H N N 88 ILE HXT H N N 89 LYS N N N N 90 LYS CA C N S 91 LYS C C N N 92 LYS O O N N 93 LYS CB C N N 94 LYS CG C N N 95 LYS CD C N N 96 LYS CE C N N 97 LYS NZ N N N 98 LYS OXT O N N 99 LYS H H N N 100 LYS H2 H N N 101 LYS HA H N N 102 LYS HB2 H N N 103 LYS HB3 H N N 104 LYS HG2 H N N 105 LYS HG3 H N N 106 LYS HD2 H N N 107 LYS HD3 H N N 108 LYS HE2 H N N 109 LYS HE3 H N N 110 LYS HZ1 H N N 111 LYS HZ2 H N N 112 LYS HZ3 H N N 113 LYS HXT H N N 114 PHE N N N N 115 PHE CA C N S 116 PHE C C N N 117 PHE O O N N 118 PHE CB C N N 119 PHE CG C Y N 120 PHE CD1 C Y N 121 PHE CD2 C Y N 122 PHE CE1 C Y N 123 PHE CE2 C Y N 124 PHE CZ C Y N 125 PHE OXT O N N 126 PHE H H N N 127 PHE H2 H N N 128 PHE HA H N N 129 PHE HB2 H N N 130 PHE HB3 H N N 131 PHE HD1 H N N 132 PHE HD2 H N N 133 PHE HE1 H N N 134 PHE HE2 H N N 135 PHE HZ H N N 136 PHE HXT H N N 137 PRO N N N N 138 PRO CA C N S 139 PRO C C N N 140 PRO O O N N 141 PRO CB C N N 142 PRO CG C N N 143 PRO CD C N N 144 PRO OXT O N N 145 PRO H H N N 146 PRO HA H N N 147 PRO HB2 H N N 148 PRO HB3 H N N 149 PRO HG2 H N N 150 PRO HG3 H N N 151 PRO HD2 H N N 152 PRO HD3 H N N 153 PRO HXT H N N 154 SER N N N N 155 SER CA C N S 156 SER C C N N 157 SER O O N N 158 SER CB C N N 159 SER OG O N N 160 SER OXT O N N 161 SER H H N N 162 SER H2 H N N 163 SER HA H N N 164 SER HB2 H N N 165 SER HB3 H N N 166 SER HG H N N 167 SER HXT H N N 168 THR N N N N 169 THR CA C N S 170 THR C C N N 171 THR O O N N 172 THR CB C N R 173 THR OG1 O N N 174 THR CG2 C N N 175 THR OXT O N N 176 THR H H N N 177 THR H2 H N N 178 THR HA H N N 179 THR HB H N N 180 THR HG1 H N N 181 THR HG21 H N N 182 THR HG22 H N N 183 THR HG23 H N N 184 THR HXT H N N 185 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASP N CA sing N N 27 ASP N H sing N N 28 ASP N H2 sing N N 29 ASP CA C sing N N 30 ASP CA CB sing N N 31 ASP CA HA sing N N 32 ASP C O doub N N 33 ASP C OXT sing N N 34 ASP CB CG sing N N 35 ASP CB HB2 sing N N 36 ASP CB HB3 sing N N 37 ASP CG OD1 doub N N 38 ASP CG OD2 sing N N 39 ASP OD2 HD2 sing N N 40 ASP OXT HXT sing N N 41 CYS N CA sing N N 42 CYS N H sing N N 43 CYS N H2 sing N N 44 CYS CA C sing N N 45 CYS CA CB sing N N 46 CYS CA HA sing N N 47 CYS C O doub N N 48 CYS C OXT sing N N 49 CYS CB SG sing N N 50 CYS CB HB2 sing N N 51 CYS CB HB3 sing N N 52 CYS SG HG sing N N 53 CYS OXT HXT sing N N 54 GLY N CA sing N N 55 GLY N H sing N N 56 GLY N H2 sing N N 57 GLY CA C sing N N 58 GLY CA HA2 sing N N 59 GLY CA HA3 sing N N 60 GLY C O doub N N 61 GLY C OXT sing N N 62 GLY OXT HXT sing N N 63 ILE N CA sing N N 64 ILE N H sing N N 65 ILE N H2 sing N N 66 ILE CA C sing N N 67 ILE CA CB sing N N 68 ILE CA HA sing N N 69 ILE C O doub N N 70 ILE C OXT sing N N 71 ILE CB CG1 sing N N 72 ILE CB CG2 sing N N 73 ILE CB HB sing N N 74 ILE CG1 CD1 sing N N 75 ILE CG1 HG12 sing N N 76 ILE CG1 HG13 sing N N 77 ILE CG2 HG21 sing N N 78 ILE CG2 HG22 sing N N 79 ILE CG2 HG23 sing N N 80 ILE CD1 HD11 sing N N 81 ILE CD1 HD12 sing N N 82 ILE CD1 HD13 sing N N 83 ILE OXT HXT sing N N 84 LYS N CA sing N N 85 LYS N H sing N N 86 LYS N H2 sing N N 87 LYS CA C sing N N 88 LYS CA CB sing N N 89 LYS CA HA sing N N 90 LYS C O doub N N 91 LYS C OXT sing N N 92 LYS CB CG sing N N 93 LYS CB HB2 sing N N 94 LYS CB HB3 sing N N 95 LYS CG CD sing N N 96 LYS CG HG2 sing N N 97 LYS CG HG3 sing N N 98 LYS CD CE sing N N 99 LYS CD HD2 sing N N 100 LYS CD HD3 sing N N 101 LYS CE NZ sing N N 102 LYS CE HE2 sing N N 103 LYS CE HE3 sing N N 104 LYS NZ HZ1 sing N N 105 LYS NZ HZ2 sing N N 106 LYS NZ HZ3 sing N N 107 LYS OXT HXT sing N N 108 PHE N CA sing N N 109 PHE N H sing N N 110 PHE N H2 sing N N 111 PHE CA C sing N N 112 PHE CA CB sing N N 113 PHE CA HA sing N N 114 PHE C O doub N N 115 PHE C OXT sing N N 116 PHE CB CG sing N N 117 PHE CB HB2 sing N N 118 PHE CB HB3 sing N N 119 PHE CG CD1 doub Y N 120 PHE CG CD2 sing Y N 121 PHE CD1 CE1 sing Y N 122 PHE CD1 HD1 sing N N 123 PHE CD2 CE2 doub Y N 124 PHE CD2 HD2 sing N N 125 PHE CE1 CZ doub Y N 126 PHE CE1 HE1 sing N N 127 PHE CE2 CZ sing Y N 128 PHE CE2 HE2 sing N N 129 PHE CZ HZ sing N N 130 PHE OXT HXT sing N N 131 PRO N CA sing N N 132 PRO N CD sing N N 133 PRO N H sing N N 134 PRO CA C sing N N 135 PRO CA CB sing N N 136 PRO CA HA sing N N 137 PRO C O doub N N 138 PRO C OXT sing N N 139 PRO CB CG sing N N 140 PRO CB HB2 sing N N 141 PRO CB HB3 sing N N 142 PRO CG CD sing N N 143 PRO CG HG2 sing N N 144 PRO CG HG3 sing N N 145 PRO CD HD2 sing N N 146 PRO CD HD3 sing N N 147 PRO OXT HXT sing N N 148 SER N CA sing N N 149 SER N H sing N N 150 SER N H2 sing N N 151 SER CA C sing N N 152 SER CA CB sing N N 153 SER CA HA sing N N 154 SER C O doub N N 155 SER C OXT sing N N 156 SER CB OG sing N N 157 SER CB HB2 sing N N 158 SER CB HB3 sing N N 159 SER OG HG sing N N 160 SER OXT HXT sing N N 161 THR N CA sing N N 162 THR N H sing N N 163 THR N H2 sing N N 164 THR CA C sing N N 165 THR CA CB sing N N 166 THR CA HA sing N N 167 THR C O doub N N 168 THR C OXT sing N N 169 THR CB OG1 sing N N 170 THR CB CG2 sing N N 171 THR CB HB sing N N 172 THR OG1 HG1 sing N N 173 THR CG2 HG21 sing N N 174 THR CG2 HG22 sing N N 175 THR CG2 HG23 sing N N 176 THR OXT HXT sing N N 177 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker ARX 500 2 ? Bruker DMX 750 # _atom_sites.entry_id 1JBL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_