HEADER HYDROLASE/RNA 06-JUN-01 1JBS TITLE CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN AND A 29-MER SRD RNA TITLE 2 ANALOG COMPND MOL_ID: 1; COMPND 2 MOLECULE: 29-MER SARCIN/RICIN DOMAIN RNA ANALOG; COMPND 3 CHAIN: C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RESTRICTOCIN; COMPND 7 CHAIN: A, B; COMPND 8 SYNONYM: RIBONUCLEASE MITOGILLIN; COMPND 9 EC: 3.1.27.- SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE SEQUENCE CONTAINS 14 HIGHLY CONSERVED NUCLEOTIDES SOURCE 4 AMONG ALL LIVING SPECIES.; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: ASPERGILLUS RESTRICTUS; SOURCE 7 ORGANISM_TAXID: 5064 KEYWDS RIBOTOXIN, HIGHLY SPECIFIC RIBONUCLEASE, PROTEIN-RNA COMPLEX, KEYWDS 2 RIBONUCLEASE T1, HYDROLASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.YANG,T.GERCZEI,L.GLOVER,C.C.CORRELL REVDAT 6 16-AUG-23 1JBS 1 REMARK LINK REVDAT 5 29-MAY-13 1JBS 1 HETATM REMARK REVDAT 4 13-JUL-11 1JBS 1 VERSN REVDAT 3 24-FEB-09 1JBS 1 VERSN REVDAT 2 01-APR-03 1JBS 1 JRNL REVDAT 1 26-OCT-01 1JBS 0 JRNL AUTH X.YANG,T.GERCZEI,L.T.GLOVER,C.C.CORRELL JRNL TITL CRYSTAL STRUCTURES OF RESTRICTOCIN-INHIBITOR COMPLEXES WITH JRNL TITL 2 IMPLICATIONS FOR RNA RECOGNITION AND BASE FLIPPING. JRNL REF NAT.STRUCT.BIOL. V. 8 968 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11685244 JRNL DOI 10.1038/NSB1101-968 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : CNS TOPOLOGY AND PARAMETER FILES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 33893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.500 REMARK 3 FREE R VALUE TEST SET COUNT : 2532 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4875 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 382 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2382 REMARK 3 NUCLEIC ACID ATOMS : 1258 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 341 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.31000 REMARK 3 B22 (A**2) : -1.03000 REMARK 3 B33 (A**2) : -1.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -11.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.31 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.820 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.200 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.030 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.530 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.190 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 40.40 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : RNA-METHYL.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : RNA-METHYL.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JBS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1000013597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36294 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 19.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.240 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.44 REMARK 200 R MERGE FOR SHELL (I) : 0.44600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.480 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1AQZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG5000, K.MES, KCL, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.93150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A C 17 O2' REMARK 470 A D 17 O2' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 15 23.76 43.09 REMARK 500 SER A 46 -10.37 92.59 REMARK 500 LYS A 88 22.80 -79.68 REMARK 500 ASN B 11 108.61 -48.02 REMARK 500 THR B 14 -17.07 -146.56 REMARK 500 LYS B 42 -10.93 68.25 REMARK 500 SER B 46 -9.63 94.03 REMARK 500 LYS B 63 115.59 -27.07 REMARK 500 GLN B 83 -71.16 -9.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 405 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U C 7 O4 REMARK 620 2 HOH C 408 O 81.9 REMARK 620 3 HOH C 410 O 86.1 164.4 REMARK 620 4 HOH C 428 O 137.9 84.9 97.6 REMARK 620 5 HOH C 436 O 109.4 80.7 112.8 107.6 REMARK 620 6 HOH C 452 O 157.2 102.9 92.0 64.9 50.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 406 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G C 14 O6 REMARK 620 2 HOH C 435 O 113.9 REMARK 620 3 HOH C 446 O 73.4 95.4 REMARK 620 4 HOH A 216 O 74.4 171.2 84.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 404 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 OMG C 24 N7 REMARK 620 2 OMG C 24 O6 68.3 REMARK 620 3 HOH C 414 O 123.2 66.6 REMARK 620 4 HOH C 417 O 88.6 155.3 124.6 REMARK 620 5 HOH C 422 O 103.6 117.3 127.0 75.4 REMARK 620 6 HOH C 425 O 79.4 84.8 64.0 82.4 157.4 REMARK 620 7 HOH C 436 O 121.9 59.6 55.4 144.9 80.4 117.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K D 402 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U D 7 O4 REMARK 620 2 HOH D 404 O 83.0 REMARK 620 3 HOH D 409 O 71.0 108.4 REMARK 620 4 HOH D 414 O 85.5 168.3 69.5 REMARK 620 5 HOH D 420 O 103.9 72.2 53.3 112.8 REMARK 620 6 HOH D 431 O 73.6 110.8 122.2 63.6 175.6 REMARK 620 7 HOH D 456 O 168.7 96.1 98.8 95.5 65.3 117.0 REMARK 620 8 HOH D 468 O 132.6 91.4 152.1 94.8 119.0 64.7 58.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K D 403 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G D 14 O6 REMARK 620 2 HOH D 416 O 65.7 REMARK 620 3 HOH D 430 O 146.4 82.0 REMARK 620 4 HOH D 446 O 83.5 122.1 123.6 REMARK 620 5 HOH D 460 O 108.9 66.7 62.8 80.5 REMARK 620 6 HOH B 172 O 80.8 128.5 115.5 89.4 164.9 REMARK 620 7 HOH B 179 O 149.3 143.8 61.9 82.6 95.6 71.8 REMARK 620 8 HOH B 200 O 93.3 73.7 68.0 159.6 119.3 70.3 90.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K D 401 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 OMG D 24 N7 REMARK 620 2 OMG D 24 O6 67.3 REMARK 620 3 HOH D 407 O 129.3 73.6 REMARK 620 4 HOH D 411 O 77.7 93.0 73.4 REMARK 620 5 HOH D 420 O 125.5 63.8 54.4 126.4 REMARK 620 6 HOH D 439 O 86.3 153.5 125.9 78.4 140.6 REMARK 620 7 HOH D 440 O 107.7 114.5 117.4 152.0 73.7 74.7 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K D 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AQZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A HIGHLY SPECIFIC ASPERGILLUS RIBOTOXIN, REMARK 900 RESTRICTOIN REMARK 900 RELATED ID: 430D RELATED DB: PDB REMARK 900 STRUCTURE OF SARCIN/RICIN LOOP FROM RAT 28S RNA REMARK 900 RELATED ID: 480D RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23S RRNA REMARK 900 RELATED ID: 483D RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE SARIN/RICIN DOMAIN FROM E.COLI 23S RRNA REMARK 900 RELATED ID: 1JBR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE RIBOTOXIN RESTRICTOCIN AND A 31-MER SRD REMARK 900 RNA INHIBITOR REMARK 900 RELATED ID: 1JBT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN COMPLEXED WITH A 29-MER REMARK 900 SARCIN/RICIN DOMAIN RNA ANALOG DBREF 1JBS A 1 149 UNP P04389 RNMG_ASPRE 28 176 DBREF 1JBS B 1 149 UNP P04389 RNMG_ASPRE 28 176 DBREF 1JBS C 1 29 PDB 1JBS 1JBS 1 29 DBREF 1JBS D 1 29 PDB 1JBS 1JBS 1 29 SEQRES 1 C 29 OMC OMG OMC OMU OMC OMC U C A G U A C SEQRES 2 C 29 G A U A G G A A C C OMG OMG A2M SEQRES 3 C 29 OMG OMC OMG SEQRES 1 D 29 OMC OMG OMC OMU OMC OMC U C A G U A C SEQRES 2 D 29 G A U A G G A A C C OMG OMG A2M SEQRES 3 D 29 OMG OMC OMG SEQRES 1 A 149 ALA THR TRP THR CYS ILE ASN GLN GLN LEU ASN PRO LYS SEQRES 2 A 149 THR ASN LYS TRP GLU ASP LYS ARG LEU LEU TYR SER GLN SEQRES 3 A 149 ALA LYS ALA GLU SER ASN SER HIS HIS ALA PRO LEU SER SEQRES 4 A 149 ASP GLY LYS THR GLY SER SER TYR PRO HIS TRP PHE THR SEQRES 5 A 149 ASN GLY TYR ASP GLY ASN GLY LYS LEU ILE LYS GLY ARG SEQRES 6 A 149 THR PRO ILE LYS PHE GLY LYS ALA ASP CYS ASP ARG PRO SEQRES 7 A 149 PRO LYS HIS SER GLN ASN GLY MET GLY LYS ASP ASP HIS SEQRES 8 A 149 TYR LEU LEU GLU PHE PRO THR PHE PRO ASP GLY HIS ASP SEQRES 9 A 149 TYR LYS PHE ASP SER LYS LYS PRO LYS GLU ASP PRO GLY SEQRES 10 A 149 PRO ALA ARG VAL ILE TYR THR TYR PRO ASN LYS VAL PHE SEQRES 11 A 149 CYS GLY ILE VAL ALA HIS GLN ARG GLY ASN GLN GLY ASP SEQRES 12 A 149 LEU ARG LEU CYS SER HIS SEQRES 1 B 149 ALA THR TRP THR CYS ILE ASN GLN GLN LEU ASN PRO LYS SEQRES 2 B 149 THR ASN LYS TRP GLU ASP LYS ARG LEU LEU TYR SER GLN SEQRES 3 B 149 ALA LYS ALA GLU SER ASN SER HIS HIS ALA PRO LEU SER SEQRES 4 B 149 ASP GLY LYS THR GLY SER SER TYR PRO HIS TRP PHE THR SEQRES 5 B 149 ASN GLY TYR ASP GLY ASN GLY LYS LEU ILE LYS GLY ARG SEQRES 6 B 149 THR PRO ILE LYS PHE GLY LYS ALA ASP CYS ASP ARG PRO SEQRES 7 B 149 PRO LYS HIS SER GLN ASN GLY MET GLY LYS ASP ASP HIS SEQRES 8 B 149 TYR LEU LEU GLU PHE PRO THR PHE PRO ASP GLY HIS ASP SEQRES 9 B 149 TYR LYS PHE ASP SER LYS LYS PRO LYS GLU ASP PRO GLY SEQRES 10 B 149 PRO ALA ARG VAL ILE TYR THR TYR PRO ASN LYS VAL PHE SEQRES 11 B 149 CYS GLY ILE VAL ALA HIS GLN ARG GLY ASN GLN GLY ASP SEQRES 12 B 149 LEU ARG LEU CYS SER HIS MODRES 1JBS OMC C 1 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMG C 2 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS OMC C 3 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMU C 4 U O2'-METHYLURIDINE 5'-MONOPHOSPHATE MODRES 1JBS OMC C 5 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMC C 6 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMG C 24 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS OMG C 25 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS A2M C 26 A MODRES 1JBS OMG C 27 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS OMC C 28 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMG C 29 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS OMC D 1 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMG D 2 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS OMC D 3 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMU D 4 U O2'-METHYLURIDINE 5'-MONOPHOSPHATE MODRES 1JBS OMC D 5 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMC D 6 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMG D 24 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS OMG D 25 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS A2M D 26 A MODRES 1JBS OMG D 27 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 1JBS OMC D 28 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 1JBS OMG D 29 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE HET OMC C 1 18 HET OMG C 2 24 HET OMC C 3 21 HET OMU C 4 21 HET OMC C 5 21 HET OMC C 6 21 HET OMG C 24 24 HET OMG C 25 24 HET A2M C 26 23 HET OMG C 27 24 HET OMC C 28 21 HET OMG C 29 24 HET OMC D 1 18 HET OMG D 2 24 HET OMC D 3 21 HET OMU D 4 21 HET OMC D 5 21 HET OMC D 6 21 HET OMG D 24 24 HET OMG D 25 24 HET A2M D 26 23 HET OMG D 27 24 HET OMC D 28 21 HET OMG D 29 24 HET K C 404 1 HET K C 405 1 HET K C 406 1 HET K D 401 1 HET K D 402 1 HET K D 403 1 HETNAM OMC O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE HETNAM OMG O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE HETNAM OMU O2'-METHYLURIDINE 5'-MONOPHOSPHATE HETNAM A2M 2'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPHATE) HETNAM K POTASSIUM ION FORMUL 1 OMC 10(C10 H16 N3 O8 P) FORMUL 1 OMG 10(C11 H16 N5 O8 P) FORMUL 1 OMU 2(C10 H15 N2 O9 P) FORMUL 1 A2M 2(C11 H16 N5 O7 P) FORMUL 5 K 6(K 1+) FORMUL 11 HOH *341(H2 O) HELIX 1 1 GLN A 26 ALA A 36 1 11 HELIX 2 2 LYS A 72 ARG A 77 1 6 HELIX 3 3 GLN B 26 ALA B 36 1 11 HELIX 4 4 LYS B 72 ARG B 77 1 6 SHEET 1 A 2 THR A 2 ASN A 11 0 SHEET 2 A 2 LYS A 16 SER A 25 -1 O LYS A 16 N ASN A 11 SHEET 1 B 5 HIS A 49 PHE A 51 0 SHEET 2 B 5 TYR A 92 PRO A 97 -1 O LEU A 93 N PHE A 51 SHEET 3 B 5 ALA A 119 TYR A 125 -1 N VAL A 121 O PHE A 96 SHEET 4 B 5 PHE A 130 ARG A 138 -1 N CYS A 131 O ILE A 122 SHEET 5 B 5 GLN A 141 LEU A 146 -1 N GLN A 141 O ARG A 138 SHEET 1 C 2 THR B 2 LEU B 10 0 SHEET 2 C 2 TRP B 17 SER B 25 -1 N GLU B 18 O GLN B 9 SHEET 1 D 5 HIS B 49 TRP B 50 0 SHEET 2 D 5 TYR B 92 PRO B 97 -1 N GLU B 95 O HIS B 49 SHEET 3 D 5 ALA B 119 TYR B 125 -1 N VAL B 121 O PHE B 96 SHEET 4 D 5 PHE B 130 ALA B 135 -1 N CYS B 131 O ILE B 122 SHEET 5 D 5 ARG B 145 LEU B 146 -1 O ARG B 145 N ALA B 135 SSBOND 1 CYS A 5 CYS A 147 1555 1555 2.05 SSBOND 2 CYS A 75 CYS A 131 1555 1555 2.05 SSBOND 3 CYS B 5 CYS B 147 1555 1555 2.03 SSBOND 4 CYS B 75 CYS B 131 1555 1555 2.06 LINK O3' OMC C 1 P OMG C 2 1555 1555 1.61 LINK O3' OMG C 2 P OMC C 3 1555 1555 1.61 LINK O3' OMC C 3 P OMU C 4 1555 1555 1.61 LINK O3' OMU C 4 P OMC C 5 1555 1555 1.61 LINK O3' OMC C 5 P OMC C 6 1555 1555 1.61 LINK O3' OMC C 6 P U C 7 1555 1555 1.60 LINK O3' C C 23 P OMG C 24 1555 1555 1.61 LINK O3' OMG C 24 P OMG C 25 1555 1555 1.61 LINK O3' OMG C 25 P A2M C 26 1555 1555 1.61 LINK O3' A2M C 26 P OMG C 27 1555 1555 1.60 LINK O3' OMG C 27 P OMC C 28 1555 1555 1.60 LINK O3' OMC C 28 P OMG C 29 1555 1555 1.61 LINK O3' OMC D 1 P OMG D 2 1555 1555 1.61 LINK O3' OMG D 2 P OMC D 3 1555 1555 1.61 LINK O3' OMC D 3 P OMU D 4 1555 1555 1.61 LINK O3' OMU D 4 P OMC D 5 1555 1555 1.61 LINK O3' OMC D 5 P OMC D 6 1555 1555 1.61 LINK O3' OMC D 6 P U D 7 1555 1555 1.60 LINK O3' C D 23 P OMG D 24 1555 1555 1.60 LINK O3' OMG D 24 P OMG D 25 1555 1555 1.61 LINK O3' OMG D 25 P A2M D 26 1555 1555 1.61 LINK O3' A2M D 26 P OMG D 27 1555 1555 1.60 LINK O3' OMG D 27 P OMC D 28 1555 1555 1.62 LINK O3' OMC D 28 P OMG D 29 1555 1555 1.61 LINK O4 U C 7 K K C 405 1555 1555 2.71 LINK O6 G C 14 K K C 406 1555 1555 2.72 LINK N7 OMG C 24 K K C 404 1555 1555 2.65 LINK O6 OMG C 24 K K C 404 1555 1555 2.85 LINK K K C 404 O HOH C 414 1555 1555 2.97 LINK K K C 404 O HOH C 417 1555 1555 2.91 LINK K K C 404 O HOH C 422 1555 1555 2.73 LINK K K C 404 O HOH C 425 1555 1555 2.83 LINK K K C 404 O HOH C 436 1555 1555 3.29 LINK K K C 405 O HOH C 408 1555 1555 2.75 LINK K K C 405 O HOH C 410 1555 1555 2.80 LINK K K C 405 O HOH C 428 1555 1555 2.54 LINK K K C 405 O HOH C 436 1555 1555 2.87 LINK K K C 405 O HOH C 452 1555 1555 3.03 LINK K K C 406 O HOH C 435 1555 1555 2.71 LINK K K C 406 O HOH C 446 1555 1555 3.07 LINK K K C 406 O HOH A 216 1555 1555 2.75 LINK O4 U D 7 K K D 402 1555 1555 2.73 LINK O6 G D 14 K K D 403 1555 1555 2.66 LINK N7 OMG D 24 K K D 401 1555 1555 2.82 LINK O6 OMG D 24 K K D 401 1555 1555 2.75 LINK K K D 401 O HOH D 407 1555 1555 2.72 LINK K K D 401 O HOH D 411 1555 1555 2.73 LINK K K D 401 O HOH D 420 1555 1555 3.20 LINK K K D 401 O HOH D 439 1555 1555 2.95 LINK K K D 401 O HOH D 440 1555 1555 3.06 LINK K K D 402 O HOH D 404 1555 1555 2.61 LINK K K D 402 O HOH D 409 1555 1555 3.32 LINK K K D 402 O HOH D 414 1555 1555 2.80 LINK K K D 402 O HOH D 420 1555 1555 3.15 LINK K K D 402 O HOH D 431 1555 1555 3.20 LINK K K D 402 O HOH D 456 1555 1555 3.07 LINK K K D 402 O HOH D 468 1555 1555 2.66 LINK K K D 403 O HOH D 416 1555 1555 3.04 LINK K K D 403 O HOH D 430 1555 1555 3.18 LINK K K D 403 O HOH D 446 1555 1555 2.69 LINK K K D 403 O HOH D 460 1555 1555 3.00 LINK K K D 403 O HOH B 172 1555 1555 2.74 LINK K K D 403 O HOH B 179 1555 1555 2.91 LINK K K D 403 O HOH B 200 1555 1555 2.87 CISPEP 1 TYR A 47 PRO A 48 0 -0.26 CISPEP 2 LYS A 111 PRO A 112 0 -0.92 CISPEP 3 TYR A 125 PRO A 126 0 2.42 CISPEP 4 TYR B 47 PRO B 48 0 -0.91 CISPEP 5 LYS B 111 PRO B 112 0 -1.42 CISPEP 6 TYR B 125 PRO B 126 0 1.26 SITE 1 AC1 5 OMG D 24 HOH D 407 HOH D 411 HOH D 439 SITE 2 AC1 5 HOH D 440 SITE 1 AC2 5 U D 7 HOH D 404 HOH D 414 HOH D 456 SITE 2 AC2 5 HOH D 468 SITE 1 AC3 7 HOH B 172 HOH B 179 HOH B 200 G D 14 SITE 2 AC3 7 HOH D 416 HOH D 446 HOH D 460 SITE 1 AC4 5 OMG C 24 HOH C 414 HOH C 417 HOH C 422 SITE 2 AC4 5 HOH C 425 SITE 1 AC5 6 U C 7 HOH C 408 HOH C 410 HOH C 428 SITE 2 AC5 6 HOH C 436 HOH C 452 SITE 1 AC6 4 HOH A 216 G C 14 HOH C 435 HOH C 446 CRYST1 62.511 101.863 41.092 90.00 92.97 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015997 0.000000 0.000830 0.00000 SCALE2 0.000000 0.009817 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024368 0.00000 HETATM 1 N1 OMC C 1 19.785 77.586 7.812 1.00 35.09 N HETATM 2 C2 OMC C 1 19.729 78.851 8.410 1.00 32.83 C HETATM 3 N3 OMC C 1 19.129 78.984 9.613 1.00 33.17 N HETATM 4 C4 OMC C 1 18.615 77.917 10.229 1.00 31.71 C HETATM 5 C5 OMC C 1 18.684 76.612 9.659 1.00 32.16 C HETATM 6 C6 OMC C 1 19.277 76.494 8.463 1.00 33.25 C HETATM 7 O2 OMC C 1 20.238 79.818 7.823 1.00 32.37 O HETATM 8 N4 OMC C 1 18.022 78.105 11.419 1.00 30.19 N HETATM 9 C1' OMC C 1 20.370 77.470 6.458 1.00 37.21 C HETATM 10 C2' OMC C 1 21.896 77.559 6.422 1.00 38.85 C HETATM 11 O2' OMC C 1 22.342 78.036 5.159 1.00 40.47 O HETATM 12 CM2 OMC C 1 21.848 79.334 4.746 1.00 41.19 C HETATM 13 C3' OMC C 1 22.256 76.103 6.684 1.00 39.43 C HETATM 14 C4' OMC C 1 21.231 75.377 5.818 1.00 38.83 C HETATM 15 O4' OMC C 1 20.034 76.200 5.918 1.00 37.97 O HETATM 16 O3' OMC C 1 23.588 75.781 6.299 1.00 40.34 O HETATM 17 C5' OMC C 1 20.900 73.967 6.229 1.00 38.49 C HETATM 18 O5' OMC C 1 20.671 73.879 7.641 1.00 40.01 O HETATM 19 P OMG C 2 24.761 75.733 7.407 1.00 40.13 P HETATM 20 OP1 OMG C 2 25.977 75.246 6.689 1.00 38.44 O HETATM 21 OP2 OMG C 2 24.277 75.017 8.626 1.00 39.75 O HETATM 22 O5' OMG C 2 24.972 77.254 7.798 1.00 37.16 O HETATM 23 C5' OMG C 2 25.574 78.160 6.896 1.00 36.04 C HETATM 24 C4' OMG C 2 25.650 79.522 7.527 1.00 35.53 C HETATM 25 O4' OMG C 2 24.306 79.992 7.835 1.00 34.56 O HETATM 26 C3' OMG C 2 26.345 79.565 8.879 1.00 35.31 C HETATM 27 O3' OMG C 2 27.758 79.528 8.727 1.00 35.88 O HETATM 28 C2' OMG C 2 25.814 80.876 9.447 1.00 34.66 C HETATM 29 O2' OMG C 2 26.433 82.019 8.883 1.00 35.47 O HETATM 30 CM2 OMG C 2 25.802 83.297 9.120 1.00 35.47 C HETATM 31 C1' OMG C 2 24.346 80.789 9.015 1.00 33.93 C HETATM 32 N9 OMG C 2 23.467 80.195 10.017 1.00 30.63 N HETATM 33 C8 OMG C 2 22.888 78.951 9.992 1.00 31.48 C HETATM 34 N7 OMG C 2 22.093 78.733 11.007 1.00 30.32 N HETATM 35 C5 OMG C 2 22.164 79.901 11.754 1.00 28.74 C HETATM 36 C6 OMG C 2 21.516 80.259 12.964 1.00 28.74 C HETATM 37 O6 OMG C 2 20.709 79.605 13.629 1.00 29.05 O HETATM 38 N1 OMG C 2 21.889 81.526 13.384 1.00 29.73 N HETATM 39 C2 OMG C 2 22.766 82.354 12.714 1.00 31.13 C HETATM 40 N2 OMG C 2 23.009 83.550 13.274 1.00 31.35 N HETATM 41 N3 OMG C 2 23.362 82.037 11.583 1.00 27.26 N HETATM 42 C4 OMG C 2 23.021 80.806 11.165 1.00 28.90 C HETATM 43 N1 OMC C 3 26.119 81.124 13.764 1.00 31.64 N HETATM 44 C2 OMC C 3 25.277 81.220 14.872 1.00 31.92 C HETATM 45 N3 OMC C 3 24.362 80.258 15.090 1.00 29.70 N HETATM 46 C4 OMC C 3 24.275 79.223 14.265 1.00 29.13 C HETATM 47 C5 OMC C 3 25.136 79.080 13.142 1.00 29.47 C HETATM 48 C6 OMC C 3 26.039 80.043 12.932 1.00 30.08 C HETATM 49 O2 OMC C 3 25.398 82.192 15.636 1.00 34.42 O HETATM 50 N4 OMC C 3 23.345 78.312 14.518 1.00 30.63 N HETATM 51 C1' OMC C 3 27.066 82.221 13.510 1.00 31.47 C HETATM 52 C2' OMC C 3 28.349 82.151 14.341 1.00 31.39 C HETATM 53 O2' OMC C 3 28.875 83.454 14.553 1.00 32.09 O HETATM 54 CM2 OMC C 3 27.982 84.541 14.906 1.00 34.06 C HETATM 55 C3' OMC C 3 29.221 81.308 13.422 1.00 31.01 C HETATM 56 C4' OMC C 3 28.888 81.918 12.067 1.00 32.27 C HETATM 57 O4' OMC C 3 27.458 82.181 12.150 1.00 31.74 O HETATM 58 O3' OMC C 3 30.611 81.401 13.732 1.00 30.07 O HETATM 59 C5' OMC C 3 29.184 81.085 10.838 1.00 32.61 C HETATM 60 O5' OMC C 3 28.736 79.743 11.027 1.00 33.48 O HETATM 61 P OMC C 3 28.661 78.731 9.800 1.00 35.46 P HETATM 62 OP1 OMC C 3 30.019 78.633 9.188 1.00 34.99 O HETATM 63 OP2 OMC C 3 27.994 77.496 10.289 1.00 34.33 O HETATM 64 N1 OMU C 4 27.628 80.836 18.708 1.00 23.65 N HETATM 65 C2 OMU C 4 26.626 80.451 19.592 1.00 23.57 C HETATM 66 N3 OMU C 4 25.786 79.471 19.130 1.00 20.93 N HETATM 67 C4 OMU C 4 25.831 78.843 17.901 1.00 23.85 C HETATM 68 C5 OMU C 4 26.904 79.275 17.043 1.00 21.78 C HETATM 69 C6 OMU C 4 27.751 80.230 17.471 1.00 22.55 C HETATM 70 O2 OMU C 4 26.498 80.946 20.700 1.00 22.00 O HETATM 71 O4 OMU C 4 24.987 77.988 17.632 1.00 24.43 O HETATM 72 C1' OMU C 4 28.526 81.923 19.142 1.00 24.42 C HETATM 73 C2' OMU C 4 29.656 81.497 20.082 1.00 24.42 C HETATM 74 O2' OMU C 4 30.037 82.583 20.918 1.00 23.90 O HETATM 75 CM2 OMU C 4 29.021 83.309 21.674 1.00 27.63 C HETATM 76 C3' OMU C 4 30.721 81.136 19.060 1.00 24.90 C HETATM 77 C4' OMU C 4 30.595 82.309 18.109 1.00 24.37 C HETATM 78 O3' OMU C 4 32.040 81.015 19.581 1.00 25.04 O HETATM 79 O4' OMU C 4 29.156 82.481 18.000 1.00 24.93 O HETATM 80 C5' OMU C 4 31.170 82.116 16.738 1.00 24.93 C HETATM 81 O5' OMU C 4 30.696 80.905 16.185 1.00 26.31 O HETATM 82 P OMU C 4 31.258 80.380 14.793 1.00 29.33 P HETATM 83 OP1 OMU C 4 32.726 80.590 14.799 1.00 28.96 O HETATM 84 OP2 OMU C 4 30.719 79.010 14.607 1.00 27.60 O HETATM 85 N1 OMC C 5 28.135 78.028 22.534 1.00 25.10 N HETATM 86 C2 OMC C 5 26.979 77.271 22.767 1.00 24.48 C HETATM 87 N3 OMC C 5 26.413 76.597 21.740 1.00 24.43 N HETATM 88 C4 OMC C 5 26.953 76.655 20.521 1.00 23.54 C HETATM 89 C5 OMC C 5 28.131 77.408 20.253 1.00 25.14 C HETATM 90 C6 OMC C 5 28.688 78.073 21.281 1.00 26.50 C HETATM 91 O2 OMC C 5 26.504 77.235 23.917 1.00 22.07 O HETATM 92 N4 OMC C 5 26.347 75.977 19.540 1.00 23.96 N HETATM 93 C1' OMC C 5 28.726 78.771 23.671 1.00 25.27 C HETATM 94 C2' OMC C 5 29.564 77.857 24.567 1.00 25.47 C HETATM 95 O2' OMC C 5 29.552 78.280 25.932 1.00 24.68 O HETATM 96 CM2 OMC C 5 28.316 78.865 26.445 1.00 27.79 C HETATM 97 C3' OMC C 5 30.907 77.967 23.855 1.00 24.29 C HETATM 98 C4' OMC C 5 30.971 79.461 23.602 1.00 24.87 C HETATM 99 O4' OMC C 5 29.611 79.777 23.184 1.00 23.97 O HETATM 100 O3' OMC C 5 31.997 77.467 24.614 1.00 25.15 O HETATM 101 C5' OMC C 5 31.943 79.932 22.547 1.00 24.65 C HETATM 102 O5' OMC C 5 31.738 79.222 21.334 1.00 24.52 O HETATM 103 P OMC C 5 32.591 79.570 20.030 1.00 26.70 P HETATM 104 OP1 OMC C 5 34.002 79.785 20.420 1.00 25.65 O HETATM 105 OP2 OMC C 5 32.265 78.551 18.994 1.00 27.47 O HETATM 106 N1 OMC C 6 27.867 73.470 24.658 1.00 25.93 N HETATM 107 C2 OMC C 6 26.953 72.494 24.213 1.00 27.50 C HETATM 108 N3 OMC C 6 26.799 72.281 22.883 1.00 23.96 N HETATM 109 C4 OMC C 6 27.516 72.983 22.007 1.00 25.32 C HETATM 110 C5 OMC C 6 28.479 73.960 22.423 1.00 22.73 C HETATM 111 C6 OMC C 6 28.625 74.163 23.750 1.00 24.55 C HETATM 112 O2 OMC C 6 26.307 71.847 25.059 1.00 28.24 O HETATM 113 N4 OMC C 6 27.310 72.748 20.714 1.00 23.23 N HETATM 114 C1' OMC C 6 27.949 73.742 26.118 1.00 26.91 C HETATM 115 C2' OMC C 6 28.584 72.624 26.947 1.00 27.59 C HETATM 116 O2' OMC C 6 28.059 72.575 28.270 1.00 29.05 O HETATM 117 CM2 OMC C 6 26.682 72.195 28.440 1.00 29.73 C HETATM 118 C3' OMC C 6 30.046 73.056 26.909 1.00 27.02 C HETATM 119 C4' OMC C 6 29.930 74.560 27.086 1.00 26.60 C HETATM 120 O4' OMC C 6 28.737 74.909 26.334 1.00 27.01 O HETATM 121 O3' OMC C 6 30.820 72.468 27.939 1.00 26.35 O HETATM 122 C5' OMC C 6 31.100 75.386 26.601 1.00 26.83 C HETATM 123 O5' OMC C 6 31.370 75.102 25.234 1.00 26.89 O HETATM 124 P OMC C 6 32.463 75.933 24.431 1.00 27.03 P HETATM 125 OP1 OMC C 6 33.771 75.804 25.114 1.00 27.03 O HETATM 126 OP2 OMC C 6 32.351 75.529 23.009 1.00 26.93 O