HEADER TRANSFERASE/HYDROLASE 17-JUN-01 1JEG TITLE SOLUTION STRUCTURE OF THE SH3 DOMAIN FROM C-TERMINAL SRC KINASE TITLE 2 COMPLEXED WITH A PEPTIDE FROM THE TYROSINE PHOSPHATASE PEP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE CSK; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 SYNONYM: C-SRC KINASE, PROTEIN-TYROSINE KINASE CYL; COMPND 6 EC: 2.7.1.112; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: HEMATOPOIETIC CELL PROTEIN-TYROSINE PHOSPHATASE 70Z-PEP; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: 25 RESIDUE PEPTIDE (RESIDUES 612-629); COMPND 12 EC: 3.1.3.48; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 9 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SH3 DOMAIN, PROTEIN-PEPTIDE COMPLEX, TYROSINE PHOSPHATASE, KINASE, KEYWDS 2 TRANSFERASE-HYDROLASE COMPLEX EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR R.GHOSE,A.SHEKHTMAN,M.J.GOGER,H.JI,D.COWBURN REVDAT 4 23-FEB-22 1JEG 1 REMARK REVDAT 3 24-FEB-09 1JEG 1 VERSN REVDAT 2 01-APR-03 1JEG 1 JRNL REVDAT 1 31-OCT-01 1JEG 0 JRNL AUTH R.GHOSE,A.SHEKHTMAN,M.J.GOGER,H.JI,D.COWBURN JRNL TITL A NOVEL, SPECIFIC INTERACTION INVOLVING THE CSK SH3 DOMAIN JRNL TITL 2 AND ITS NATURAL LIGAND. JRNL REF NAT.STRUCT.BIOL. V. 8 998 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11685249 JRNL DOI 10.1038/NSB1101-998 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5, DYANA 1.5 REMARK 3 AUTHORS : GUENTERT, MUMENTHALER, HERMANN (DYANA), GUENTERT, REMARK 3 MUMENTHALER, HERMANN (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JEG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1000013680. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSIONAL REMARK 210 ANGLE DYNMAICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-25 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 ILE A 4 REMARK 465 GLN A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 TRP A 8 REMARK 465 PRO A 9 REMARK 465 GLY A 70 REMARK 465 VAL A 71 REMARK 465 LYS A 72 REMARK 465 ALA A 73 REMARK 465 GLY A 74 REMARK 465 THR A 75 REMARK 465 LYS A 76 REMARK 465 LEU A 77 REMARK 465 SER A 78 REMARK 465 LEU A 79 REMARK 465 MET A 80 REMARK 465 PRO A 81 REMARK 465 TRP A 82 REMARK 465 PHE A 83 REMARK 465 SER B 1 REMARK 465 ARG B 2 REMARK 465 ARG B 3 REMARK 465 THR B 4 REMARK 465 ASP B 5 REMARK 465 ASP B 6 REMARK 465 GLU B 7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 19 72.87 -106.35 REMARK 500 1 LYS A 32 124.73 -36.09 REMARK 500 1 PRO A 45 -82.72 -75.02 REMARK 500 1 ASN A 46 -35.04 -33.63 REMARK 500 1 LEU B 12 175.88 -48.99 REMARK 500 2 ASN A 46 -33.90 75.09 REMARK 500 2 LEU B 12 174.26 -47.05 REMARK 500 3 LYS A 32 134.08 -35.71 REMARK 500 3 PRO A 45 -77.29 -75.02 REMARK 500 3 ASN A 46 -36.04 -33.15 REMARK 500 3 ARG A 68 -30.83 -37.86 REMARK 500 3 LEU B 12 174.86 -48.52 REMARK 500 4 ASN A 19 76.35 -116.72 REMARK 500 4 HIS A 21 175.21 -59.37 REMARK 500 4 LYS A 32 145.25 -39.52 REMARK 500 4 PRO A 45 -90.55 -74.98 REMARK 500 4 ASN A 46 41.91 -86.64 REMARK 500 4 LEU B 12 176.06 -48.92 REMARK 500 5 ASN A 46 29.44 38.36 REMARK 500 5 LEU B 12 175.28 -48.47 REMARK 500 6 LYS A 32 125.71 -39.61 REMARK 500 6 PRO A 45 -82.61 -75.03 REMARK 500 6 ASN A 46 -40.88 -27.20 REMARK 500 6 LEU B 12 174.59 -48.32 REMARK 500 7 PRO A 45 -79.02 -75.04 REMARK 500 7 ASN A 46 -35.11 -33.54 REMARK 500 7 ARG A 68 -32.55 -39.16 REMARK 500 7 LEU B 12 175.87 -48.40 REMARK 500 8 ASN A 19 72.54 -119.98 REMARK 500 8 HIS A 21 41.35 -89.24 REMARK 500 8 PRO A 45 -81.58 -74.91 REMARK 500 8 ASN A 46 -35.99 -33.04 REMARK 500 8 LEU B 12 175.40 -48.43 REMARK 500 9 HIS A 21 37.55 -89.23 REMARK 500 9 LYS A 32 128.74 -39.69 REMARK 500 9 PRO A 45 -82.73 -75.02 REMARK 500 9 ASN A 46 -35.67 -32.99 REMARK 500 9 LEU B 12 174.34 -48.05 REMARK 500 9 ARG B 15 89.77 -68.40 REMARK 500 10 PRO A 45 -81.87 -75.03 REMARK 500 10 LEU B 12 174.70 -47.76 REMARK 500 11 LYS A 32 126.21 -37.26 REMARK 500 11 PRO A 45 -80.40 -74.84 REMARK 500 11 ASN A 46 -37.15 -31.48 REMARK 500 11 LEU B 12 175.38 -47.70 REMARK 500 12 ASN A 46 31.60 37.92 REMARK 500 12 LEU B 12 175.44 -47.94 REMARK 500 13 ASP A 27 -170.24 -62.98 REMARK 500 13 ASN A 46 42.84 -75.87 REMARK 500 13 LEU B 12 174.59 -48.16 REMARK 500 REMARK 500 THIS ENTRY HAS 96 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1JEG A 1 83 UNP P41241 CSK_MOUSE 1 83 DBREF 1JEG B 1 25 UNP P29352 PTN8_MOUSE 605 629 SEQRES 1 A 83 MET SER ALA ILE GLN ALA ALA TRP PRO SER GLY THR GLU SEQRES 2 A 83 CYS ILE ALA LYS TYR ASN PHE HIS GLY THR ALA GLU GLN SEQRES 3 A 83 ASP LEU PRO PHE CYS LYS GLY ASP VAL LEU THR ILE VAL SEQRES 4 A 83 ALA VAL THR LYS ASP PRO ASN TRP TYR LYS ALA LYS ASN SEQRES 5 A 83 LYS VAL GLY ARG GLU GLY ILE ILE PRO ALA ASN TYR VAL SEQRES 6 A 83 GLN LYS ARG GLU GLY VAL LYS ALA GLY THR LYS LEU SER SEQRES 7 A 83 LEU MET PRO TRP PHE SEQRES 1 B 25 SER ARG ARG THR ASP ASP GLU ILE PRO PRO PRO LEU PRO SEQRES 2 B 25 GLU ARG THR PRO GLU SER PHE ILE VAL VAL GLU GLU HELIX 1 1 THR B 16 ILE B 21 5 6 SHEET 1 A 5 GLU A 57 PRO A 61 0 SHEET 2 A 5 TRP A 47 LYS A 51 -1 O TYR A 48 N ILE A 60 SHEET 3 A 5 VAL A 35 VAL A 41 -1 O THR A 37 N LYS A 51 SHEET 4 A 5 GLU A 13 ALA A 16 -1 N CYS A 14 O LEU A 36 SHEET 5 A 5 VAL A 65 LYS A 67 -1 N GLN A 66 O ILE A 15 CRYST1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1