HEADER VIRUS/RECEPTOR 19-JUN-01 1JEW TITLE CRYO-EM STRUCTURE OF COXSACKIEVIRUS B3(M STRAIN) WITH ITS CELLULAR TITLE 2 RECEPTOR, COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR (CAR). COMPND MOL_ID: 1; COMPND 2 MOLECULE: COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR; COMPND 3 CHAIN: R; COMPND 4 FRAGMENT: RESIDUES 21-140; COMPND 5 SYNONYM: COXSACKIEVIRUS B-ADENOVIRUS RECEPTOR, HCAR, CVB3 BINDING COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: COXSACKIEVIRUS CAPSID, COAT PROTEIN VP1; COMPND 10 CHAIN: 1; COMPND 11 FRAGMENT: RESIDUES 571-851; COMPND 12 SYNONYM: P1D; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2; COMPND 16 CHAIN: 2; COMPND 17 FRAGMENT: RESIDUES 70-332; COMPND 18 SYNONYM: P1B; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 4; COMPND 21 MOLECULE: COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3; COMPND 22 CHAIN: 3; COMPND 23 FRAGMENT: RESIDUES 333-570; COMPND 24 SYNONYM: P1C; COMPND 25 ENGINEERED: YES; COMPND 26 MOL_ID: 5; COMPND 27 MOLECULE: COXSACKIEVIRUS CAPSID, COAT PROTEIN VP4; COMPND 28 CHAIN: 4; COMPND 29 FRAGMENT: RESIDUES 2-69; COMPND 30 SYNONYM: P1A; COMPND 31 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CAR; SOURCE 6 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HOUSE MOUSE; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: A9 CELLS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3 (STRAIN WOODRUFF); SOURCE 12 ORGANISM_TAXID: 103904; SOURCE 13 STRAIN: WOODRUFF; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HELA CELLS; SOURCE 18 OTHER_DETAILS: COXSACKIEVIRUS B3; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3 (STRAIN WOODRUFF); SOURCE 21 ORGANISM_TAXID: 103904; SOURCE 22 STRAIN: WOODRUFF; SOURCE 23 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 24 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM_CELL_LINE: HELA CELLS; SOURCE 27 OTHER_DETAILS: COXSACKIEVIRUS B3; SOURCE 28 MOL_ID: 4; SOURCE 29 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3 (STRAIN WOODRUFF); SOURCE 30 ORGANISM_TAXID: 103904; SOURCE 31 STRAIN: WOODRUFF; SOURCE 32 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 33 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 34 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 35 EXPRESSION_SYSTEM_CELL_LINE: HELA CELLS; SOURCE 36 OTHER_DETAILS: COXSACKIEVIRUS B3; SOURCE 37 MOL_ID: 5; SOURCE 38 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3 (STRAIN WOODRUFF); SOURCE 39 ORGANISM_TAXID: 103904; SOURCE 40 STRAIN: WOODRUFF; SOURCE 41 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 42 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 43 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 44 EXPRESSION_SYSTEM_CELL_LINE: HELA CELLS; SOURCE 45 OTHER_DETAILS: COXSACKIEVIRUS B3 KEYWDS COXSACKIEVIRUS B3, CVB3, CAR, CRYO-EM STRUCTURE, ICOSAHEDRAL VIRUS, KEYWDS 2 VIRUS-RECEPTOR COMPLEX EXPDTA ELECTRON MICROSCOPY MDLTYP CA ATOMS ONLY, CHAIN R, 1, 2, 3, 4 AUTHOR M.G.ROSSMANN,Y.HE REVDAT 8 07-FEB-24 1JEW 1 REMARK REVDAT 7 31-MAR-21 1JEW 1 SOURCE SEQADV REVDAT 6 18-JUL-18 1JEW 1 REMARK REVDAT 5 24-FEB-09 1JEW 1 VERSN REVDAT 4 20-JUL-04 1JEW 1 TITLE REVDAT 3 01-APR-03 1JEW 1 JRNL REVDAT 2 08-MAY-02 1JEW 1 JRNL REVDAT 1 03-OCT-01 1JEW 0 JRNL AUTH Y.HE,P.R.CHIPMAN,J.HOWITT,C.M.BATOR,M.A.WHITT,T.S.BAKER, JRNL AUTH 2 R.J.KUHN,C.W.ANDERSON,P.FREIMUTH,M.G.ROSSMANN JRNL TITL INTERACTION OF COXSACKIEVIRUS B3 WITH THE FULL LENGTH JRNL TITL 2 COXSACKIEVIRUS-ADENOVIRUS RECEPTOR. JRNL REF NAT.STRUCT.BIOL. V. 8 874 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11573093 JRNL DOI 10.1038/NSB1001-874 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.M.BERGELSON,J.A.CUNNINGHAM,G.DROGUETT,E.A.KURT-JONES, REMARK 1 AUTH 2 A.KRITHIVAS,J.S.HONG,M.S.HORWITZ,R.L.CROWELL,R.W.FINBERG REMARK 1 TITL ISOLATION OF A COMMON RECEPTOR FOR COXSACKIE B VIRUSES AND REMARK 1 TITL 2 ADENOVIRUSES 2 AND 5 REMARK 1 REF SCIENCE V. 275 1320 1997 REMARK 1 REFN ISSN 0036-8075 REMARK 1 DOI 10.1126/SCIENCE.275.5304.1320 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.C.BEWLEY,K.SPRINGER,Y.B.ZHANG,P.FREIMUTH,J.M.FLANAGAN REMARK 1 TITL STRUCTURAL ANALYSIS OF THE MECHANISM OF ADENOVIRUS BINDING REMARK 1 TITL 2 TO ITS HUMAN CELLULAR RECEPTOR CAR REMARK 1 REF SCIENCE V. 286 1579 1999 REMARK 1 REFN ISSN 0036-8075 REMARK 1 DOI 10.1126/SCIENCE.286.5444.1579 REMARK 1 REFERENCE 3 REMARK 1 AUTH J.K.MUCKELBAUER,M.KREMER,I.MINOR,G.DIANA,F.J.DUTKO, REMARK 1 AUTH 2 J.GROARKE,D.C.PEVEAR,M.G.ROSSMAN REMARK 1 TITL THE STRUCTURE OF COXSACKIEVIRUS B3 AT 3.5A RESOLUTION REMARK 1 REF STRUCTURE V. 3 653 1995 REMARK 1 REFN ISSN 0969-2126 REMARK 2 REMARK 2 RESOLUTION. 22.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PURDUE PROGRAMS REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : OTHER REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : METHOD--ACTA CRYST. D56, 1341 REFINEMENT REMARK 3 PROTOCOL--EMFIT DETAILS--THE DIFFERENCE MAP BETWEEN CVB3-CAR REMARK 3 COMPLEX AND NATIVE CVB WAS CALCULATED AND THEN FITTED WITH THE N- REMARK 3 TERMINAL DOMAIN OF CAR (1KAC, B-CHAIN). THE AUTOMATIC FITTING REMARK 3 WAS DONE USI PROGRAM EMFIT DESCRIBED IN ACTA CRYST. D56, 1341- REMARK 3 1349. THE CRYSTAL STRUCTURE OF POLIOVIRUS WAS PLACED INTO THE REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 22.00 REMARK 3 NUMBER OF PARTICLES : 635 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: THE PIXEL SIZE OF THE REMARK 3 CRYO-EM MAP WAS CALIBRATED AGAINST A LOW RESOLUTION DENSITY MAP REMARK 3 CALCULATED FROM THE CRYSTAL STRUCTURE OF COXSACKIEVIRUS B3. REMARK 3 DENSITIES WERE COMPARED BY CROSS-CORRELATION WITHIN A SPHERICAL REMARK 3 SHELL OF INTERNAL RADIUS CORRELATION WITHIN A SPHERICAL SHELL OF REMARK 3 INTERNAL RADIUS 110 ANGSTROMS AND EXTERNAL RADIUS OF 145 REMARK 3 ANGSTROMS. REMARK 3 REMARK 3 OTHER DETAILS: THE RESOLUTION OF THE FINAL RECONSTRUCTED DENSITY REMARK 3 WAS DETERMINED TO BE AT LEAST 22 ANGSTROMS, AS MEASURED BY REMARK 3 RANDOMLY SPLITTING THE PARTICLES INTO TWO SETS AND COMPARING REMARK 3 STRUCTURE FACTORS OBTAINED FROM SEPARATE RECONSTRUCTIONS (BAKER REMARK 3 ET AL. 1991, BIOPHYS.J. 60, 1445-1456). THE EIGENVALUE SPECTRUM REMARK 3 GAVE AN INDICATION OF THE RANDOMNESS OF THE DATA THAT WAS REMARK 3 INCLUDED IN THE RECONSTRUCTION. THE COMPLETENESS OF THE DATA WAS REMARK 3 VERIFIED IN THAT ALL EIGENVALUES EXCEEDED 1.0. REMARK 4 REMARK 4 1JEW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1000013689. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COXSACKIEVIRUS B3(M STRAIN) REMARK 245 WITH ITS CELLULAR RECEPTOR REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : CVB3 WAS INCUBATED WITH CAR REMARK 245 SAMPLE FOR 1 HOURS AT 25 REMARK 245 DEGREES CELSIUS (298 KELVIN) REMARK 245 USING A FOUR-FOLD EXCESS OF CAR REMARK 245 FOR EACH OF THE SIXTY POSSIBLE REMARK 245 BINDING SITES PER VIRION. AFTER REMARK 245 INCUBATION, SAMPLES WERE REMARK 245 PREPARED AS THIN LAYERS OF REMARK 245 VITREOUS ICE AND MAINTAINED AT REMARK 245 NEAR LIQUID NITROGEN REMARK 245 TEMPERATURE IN THE ELECTRON REMARK 245 MICROSCOPE WITH A GATAN 626 REMARK 245 CRYOTRANSFER HOLDER. REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 01-JUN-00 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 120.00 REMARK 245 MICROSCOPE MODEL : FEI/PHILIPS CM300FEG/T REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 4600.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 61000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, 1, 2, 3, 4 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 2 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 2 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 3 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 4 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 5 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 6 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 6 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 6 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 8 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 8 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 9 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 9 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 9 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 10 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 10 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 11 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 11 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 11 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 12 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 12 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 12 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 13 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 13 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 13 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 14 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 14 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 14 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 15 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 15 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 15 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 16 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 16 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 16 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 17 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 17 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 18 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 18 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 18 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 19 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 20 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 20 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 20 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 21 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 21 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 21 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 22 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 22 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 23 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 23 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 24 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 24 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 25 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 25 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 25 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 27 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 27 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 28 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 28 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 28 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 29 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 29 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 29 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 30 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 30 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 30 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 31 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 31 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 31 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 32 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 32 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 33 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 33 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 34 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 34 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 34 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 35 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 35 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 35 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 36 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 36 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 36 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 37 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 37 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 37 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 38 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 38 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 38 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 39 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 39 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 39 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 40 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 40 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 41 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 41 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 41 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 42 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 42 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 42 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 43 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 43 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 44 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 44 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 44 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 45 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 45 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 45 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 46 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 46 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 46 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 47 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 47 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 47 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 48 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 48 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 48 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 49 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 49 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 49 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 50 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 50 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 50 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 51 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 51 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 51 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 52 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 52 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 52 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 53 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 53 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 53 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 54 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 54 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 55 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 55 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 56 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 57 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 57 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 58 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 58 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 59 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 59 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 60 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 60 -0.500000 -0.809017 -0.309017 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY 1 1 REMARK 465 PRO 1 2 REMARK 465 VAL 1 3 REMARK 465 GLU 1 4 REMARK 465 ASP 1 5 REMARK 465 ALA 1 6 REMARK 465 ILE 1 7 REMARK 465 THR 1 8 REMARK 465 ALA 1 9 REMARK 465 ALA 1 10 REMARK 465 ILE 1 11 REMARK 465 GLY 1 12 REMARK 465 SER 2 1 REMARK 465 PRO 2 2 REMARK 465 THR 2 3 REMARK 465 VAL 2 4 REMARK 465 GLU 2 5 REMARK 465 GLU 2 6 REMARK 465 CYS 2 7 REMARK 465 ALA 4 11A REMARK 465 HIS 4 11B REMARK 465 GLU 4 11C REMARK 465 THR 4 11D REMARK 465 GLY 4 11E REMARK 465 LEU 4 11F REMARK 465 ASN 4 11G REMARK 465 ALA 4 11H REMARK 465 SER 4 11I REMARK 465 GLY 4 11J REMARK 465 ASN 4 11K REMARK 465 SER 4 11L REMARK 465 ILE 4 11M REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA PRO R 27 CA ASN 2 139 1.14 REMARK 500 CA PRO R 128 CA VAL 1 91 1.73 REMARK 500 CA GLU R 50 CA MET 1 213 1.83 REMARK 500 CA SER R 48 CA ASN 1 212 2.10 REMARK 500 CA PRO R 49 CA ASN 1 212 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1COV RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF COXSACKIEVIRUS B3 (CVB3) REMARK 900 RELATED ID: 1KAC RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF CAR REMARK 900 RELATED ID: 1F5W RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF CAR REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE COXSACKIEVIRUS B3 USED IN THE EM EXPERIMENT REMARK 999 IS M STRAIN, WHICH MIGHT BE DIFFERENT SLIGHTLY REMARK 999 WITH OTHER ISOLATES GIVING ARISE TO THE CONFLICTS. DBREF 1JEW R 23 142 UNP P78310 CXAR_HUMAN 21 140 DBREF 1JEW 1 1 281 UNP Q66282 POLG_CXB3W 571 851 DBREF 1JEW 2 1 263 UNP Q66282 POLG_CXB3W 70 332 DBREF 1JEW 3 1 238 UNP Q66282 POLG_CXB3W 333 570 DBREF 1JEW 4 2 56 UNP Q66282 POLG_CXB3W 2 69 SEQADV 1JEW THR 2 151 UNP Q66282 SER 220 CONFLICT SEQADV 1JEW VAL 2 245 UNP Q66282 ILE 314 CONFLICT SEQADV 1JEW GLU 3 234 UNP Q66282 GLN 566 CONFLICT SEQRES 1 R 120 SER ILE THR THR PRO GLU GLU MET ILE GLU LYS ALA LYS SEQRES 2 R 120 GLY GLU THR ALA TYR LEU PRO CYS LYS PHE THR LEU SER SEQRES 3 R 120 PRO GLU ASP GLN GLY PRO LEU ASP ILE GLU TRP LEU ILE SEQRES 4 R 120 SER PRO ALA ASP ASN GLN LYS VAL ASP GLN VAL ILE ILE SEQRES 5 R 120 LEU TYR SER GLY ASP LYS ILE TYR ASP ASP TYR TYR PRO SEQRES 6 R 120 ASP LEU LYS GLY ARG VAL HIS PHE THR SER ASN ASP LEU SEQRES 7 R 120 LYS SER GLY ASP ALA SER ILE ASN VAL THR ASN LEU GLN SEQRES 8 R 120 LEU SER ASP ILE GLY THR TYR GLN CYS LYS VAL LYS LYS SEQRES 9 R 120 ALA PRO GLY VAL ALA ASN LYS LYS ILE HIS LEU VAL VAL SEQRES 10 R 120 LEU VAL LYS SEQRES 1 1 281 GLY PRO VAL GLU ASP ALA ILE THR ALA ALA ILE GLY ARG SEQRES 2 1 281 VAL ALA ASP THR VAL GLY THR GLY PRO THR ASN SER GLU SEQRES 3 1 281 ALA ILE PRO ALA LEU THR ALA ALA GLU THR GLY HIS THR SEQRES 4 1 281 SER GLN VAL VAL PRO SER ASP THR MET GLN THR ARG HIS SEQRES 5 1 281 VAL LYS ASN TYR HIS SER ARG SER GLU SER THR ILE GLU SEQRES 6 1 281 ASN PHE LEU CYS ARG SER ALA CYS VAL TYR PHE THR GLU SEQRES 7 1 281 TYR GLU ASN SER GLY ALA LYS ARG TYR ALA GLU TRP VAL SEQRES 8 1 281 ILE THR PRO ARG GLN ALA ALA GLN LEU ARG ARG LYS LEU SEQRES 9 1 281 GLU PHE PHE THR TYR VAL ARG PHE ASP LEU GLU LEU THR SEQRES 10 1 281 PHE VAL ILE THR SER THR GLN GLN PRO SER THR THR GLN SEQRES 11 1 281 ASN GLN ASP ALA GLN ILE LEU THR HIS GLN ILE MET TYR SEQRES 12 1 281 VAL PRO PRO GLY GLY PRO VAL PRO ASP LYS VAL ASP SER SEQRES 13 1 281 TYR VAL TRP GLN THR SER THR ASN PRO SER VAL PHE TRP SEQRES 14 1 281 THR GLU GLY ASN ALA PRO PRO ARG MET SER VAL PRO PHE SEQRES 15 1 281 LEU SER ILE GLY ASN ALA TYR SER ASN PHE TYR ASP GLY SEQRES 16 1 281 TRP SER GLU PHE SER ARG ASN GLY VAL TYR GLY ILE ASN SEQRES 17 1 281 THR LEU ASN ASN MET GLY THR LEU TYR ALA ARG HIS VAL SEQRES 18 1 281 ASN ALA GLY SER THR GLY PRO ILE LYS SER THR ILE ARG SEQRES 19 1 281 ILE TYR PHE LYS PRO LYS HIS VAL LYS ALA TRP ILE PRO SEQRES 20 1 281 ARG PRO PRO ARG LEU CYS GLN TYR GLU LYS ALA LYS ASN SEQRES 21 1 281 VAL ASN PHE GLN PRO SER GLY VAL THR THR THR ARG GLN SEQRES 22 1 281 SER ILE THR THR MET THR ASN THR SEQRES 1 2 263 SER PRO THR VAL GLU GLU CYS GLY TYR SER ASP ARG VAL SEQRES 2 2 263 ARG SER ILE THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 2 263 GLU CYS ALA ASN VAL VAL VAL GLY TYR GLY VAL TRP PRO SEQRES 4 2 263 ASP TYR LEU LYS ASP SER GLU ALA THR ALA GLU ASP GLN SEQRES 5 2 263 PRO THR GLN PRO ASP VAL ALA THR CYS ARG PHE TYR THR SEQRES 6 2 263 LEU ASP SER VAL GLN TRP GLN LYS THR SER PRO GLY TRP SEQRES 7 2 263 TRP TRP LYS LEU PRO ASP ALA LEU SER ASN LEU GLY LEU SEQRES 8 2 263 PHE GLY GLN ASN MET GLN TYR HIS TYR LEU GLY ARG THR SEQRES 9 2 263 GLY TYR THR ILE HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 2 263 HIS GLN GLY CYS LEU LEU VAL VAL CYS VAL PRO GLU ALA SEQRES 11 2 263 GLU MET GLY CYS ALA THR LEU ASN ASN THR PRO SER SER SEQRES 12 2 263 ALA GLU LEU LEU GLY GLY ASP THR ALA LYS GLU PHE ALA SEQRES 13 2 263 ASP LYS PRO VAL ALA SER GLY SER ASN LYS LEU VAL GLN SEQRES 14 2 263 ARG VAL VAL TYR ASN ALA GLY MET GLY VAL GLY VAL GLY SEQRES 15 2 263 ASN LEU THR ILE PHE PRO HIS GLN TRP ILE ASN LEU ARG SEQRES 16 2 263 THR ASN ASN SER ALA THR ILE VAL MET PRO TYR THR ASN SEQRES 17 2 263 SER VAL PRO MET ASP ASN MET PHE ARG HIS ASN ASN VAL SEQRES 18 2 263 THR LEU MET VAL ILE PRO PHE VAL PRO LEU ASP TYR CYS SEQRES 19 2 263 PRO GLY SER THR THR TYR VAL PRO ILE THR VAL THR ILE SEQRES 20 2 263 ALA PRO MET CYS ALA GLU TYR ASN GLY LEU ARG LEU ALA SEQRES 21 2 263 GLY HIS GLN SEQRES 1 3 238 GLY LEU PRO THR MET ASN THR PRO GLY SER CYS GLN PHE SEQRES 2 3 238 LEU THR SER ASP ASP PHE GLN SER PRO SER ALA MET PRO SEQRES 3 3 238 GLN TYR ASP VAL THR PRO GLU MET ARG ILE PRO GLY GLU SEQRES 4 3 238 VAL LYS ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 3 238 VAL PRO VAL GLN ASN VAL GLY GLU LYS VAL ASN SER MET SEQRES 6 3 238 GLU ALA TYR GLN ILE PRO VAL ARG SER ASN GLU GLY SER SEQRES 7 3 238 GLY THR GLN VAL PHE GLY PHE PRO LEU GLN PRO GLY TYR SEQRES 8 3 238 SER SER VAL PHE SER ARG THR LEU LEU GLY GLU ILE LEU SEQRES 9 3 238 ASN TYR TYR THR HIS TRP SER GLY SER ILE LYS LEU THR SEQRES 10 3 238 PHE MET PHE CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 3 238 LEU LEU ALA TYR SER PRO PRO GLY ALA GLY ALA PRO THR SEQRES 12 3 238 LYS ARG VAL ASP ALA MET LEU GLY THR HIS VAL VAL TRP SEQRES 13 3 238 ASP VAL GLY LEU GLN SER SER CYS VAL LEU CYS ILE PRO SEQRES 14 3 238 TRP ILE SER GLN THR HIS TYR ARG TYR VAL ALA SER ASP SEQRES 15 3 238 GLU TYR THR ALA GLY GLY PHE ILE THR CYS TRP TYR GLN SEQRES 16 3 238 THR ASN ILE VAL VAL PRO ALA ASP ALA GLN SER SER CYS SEQRES 17 3 238 TYR ILE MET CYS PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 3 238 VAL ARG LEU LEU LYS ASP THR PRO PHE ILE SER GLN GLU SEQRES 19 3 238 ASN PHE PHE GLN SEQRES 1 4 68 GLY ALA GLN VAL SER THR GLN LYS THR GLY ALA HIS GLU SEQRES 2 4 68 THR GLY LEU ASN ALA SER GLY ASN SER ILE ILE HIS TYR SEQRES 3 4 68 THR ASN ILE ASN TYR TYR LYS ASP ALA ALA SER ASN SER SEQRES 4 4 68 ALA ASN ARG GLN ASP PHE THR GLN ASP PRO SER LYS PHE SEQRES 5 4 68 THR GLU PRO VAL LYS ASP ILE MET ILE LYS SER LEU PRO SEQRES 6 4 68 ALA LEU ASN CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000