data_1JGG # _entry.id 1JGG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1JGG pdb_00001jgg 10.2210/pdb1jgg/pdb NDB PDT031 ? ? RCSB RCSB013741 ? ? WWPDB D_1000013741 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-07-06 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1JGG _pdbx_database_status.recvd_initial_deposition_date 2001-06-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hirsch, J.A.' 1 'Aggarwal, A.K.' 2 # _citation.id primary _citation.title 'Structure of the even-skipped homeodomain complexed to AT-rich DNA: new perspectives on homeodomain specificity.' _citation.journal_abbrev 'EMBO J.' _citation.journal_volume 14 _citation.page_first 6280 _citation.page_last 6291 _citation.year 1995 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8557047 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hirsch, J.A.' 1 ? primary 'Aggarwal, A.K.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(P*TP*AP*AP*TP*TP*GP*AP*AP*TP*T)-3'" 3058.040 1 ? ? ? ? 2 polymer syn "5'-D(P*AP*AP*TP*TP*CP*AP*AP*TP*TP*A)-3'" 3027.030 1 ? ? ? ? 3 polymer man 'Segmentation Protein Even-Skipped' 7550.718 2 ? ? Homeodomain ? 4 water nat water 18.015 68 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DA)(DA)(DT)(DT)(DG)(DA)(DA)(DT)(DT)' TAATTGAATT C ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DT)(DT)(DC)(DA)(DA)(DT)(DT)(DA)' AATTCAATTA D ? 3 'polypeptide(L)' no no VRRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQR VRRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQR A,B ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DA n 1 4 DT n 1 5 DT n 1 6 DG n 1 7 DA n 1 8 DA n 1 9 DT n 1 10 DT n 2 1 DA n 2 2 DA n 2 3 DT n 2 4 DT n 2 5 DC n 2 6 DA n 2 7 DA n 2 8 DT n 2 9 DT n 2 10 DA n 3 1 VAL n 3 2 ARG n 3 3 ARG n 3 4 TYR n 3 5 ARG n 3 6 THR n 3 7 ALA n 3 8 PHE n 3 9 THR n 3 10 ARG n 3 11 ASP n 3 12 GLN n 3 13 LEU n 3 14 GLY n 3 15 ARG n 3 16 LEU n 3 17 GLU n 3 18 LYS n 3 19 GLU n 3 20 PHE n 3 21 TYR n 3 22 LYS n 3 23 GLU n 3 24 ASN n 3 25 TYR n 3 26 VAL n 3 27 SER n 3 28 ARG n 3 29 PRO n 3 30 ARG n 3 31 ARG n 3 32 CYS n 3 33 GLU n 3 34 LEU n 3 35 ALA n 3 36 ALA n 3 37 GLN n 3 38 LEU n 3 39 ASN n 3 40 LEU n 3 41 PRO n 3 42 GLU n 3 43 SER n 3 44 THR n 3 45 ILE n 3 46 LYS n 3 47 VAL n 3 48 TRP n 3 49 PHE n 3 50 GLN n 3 51 ASN n 3 52 ARG n 3 53 ARG n 3 54 MET n 3 55 LYS n 3 56 ASP n 3 57 LYS n 3 58 ARG n 3 59 GLN n 3 60 ARG n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'fruit fly' _entity_src_gen.gene_src_genus Drosophila _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-3a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 201 201 DT THY C . n A 1 2 DA 2 202 202 DA ADE C . n A 1 3 DA 3 203 203 DA ADE C . n A 1 4 DT 4 204 204 DT THY C . n A 1 5 DT 5 205 205 DT THY C . n A 1 6 DG 6 206 206 DG GUA C . n A 1 7 DA 7 207 207 DA ADE C . n A 1 8 DA 8 208 208 DA ADE C . n A 1 9 DT 9 209 209 DT THY C . n A 1 10 DT 10 210 210 DT THY C . n B 2 1 DA 1 211 211 DA ADE D . n B 2 2 DA 2 212 212 DA ADE D . n B 2 3 DT 3 213 213 DT THY D . n B 2 4 DT 4 214 214 DT THY D . n B 2 5 DC 5 215 215 DC CYT D . n B 2 6 DA 6 216 216 DA ADE D . n B 2 7 DA 7 217 217 DA ADE D . n B 2 8 DT 8 218 218 DT THY D . n B 2 9 DT 9 219 219 DT THY D . n B 2 10 DA 10 220 220 DA ADE D . n C 3 1 VAL 1 101 ? ? ? A . n C 3 2 ARG 2 102 ? ? ? A . n C 3 3 ARG 3 103 103 ARG ARG A . n C 3 4 TYR 4 104 104 TYR TYR A . n C 3 5 ARG 5 105 105 ARG ARG A . n C 3 6 THR 6 106 106 THR THR A . n C 3 7 ALA 7 107 107 ALA ALA A . n C 3 8 PHE 8 108 108 PHE PHE A . n C 3 9 THR 9 109 109 THR THR A . n C 3 10 ARG 10 110 110 ARG ARG A . n C 3 11 ASP 11 111 111 ASP ASP A . n C 3 12 GLN 12 112 112 GLN GLN A . n C 3 13 LEU 13 113 113 LEU LEU A . n C 3 14 GLY 14 114 114 GLY GLY A . n C 3 15 ARG 15 115 115 ARG ARG A . n C 3 16 LEU 16 116 116 LEU LEU A . n C 3 17 GLU 17 117 117 GLU GLU A . n C 3 18 LYS 18 118 118 LYS LYS A . n C 3 19 GLU 19 119 119 GLU GLU A . n C 3 20 PHE 20 120 120 PHE PHE A . n C 3 21 TYR 21 121 121 TYR TYR A . n C 3 22 LYS 22 122 122 LYS LYS A . n C 3 23 GLU 23 123 123 GLU GLU A . n C 3 24 ASN 24 124 124 ASN ASN A . n C 3 25 TYR 25 125 125 TYR TYR A . n C 3 26 VAL 26 126 126 VAL VAL A . n C 3 27 SER 27 127 127 SER SER A . n C 3 28 ARG 28 128 128 ARG ARG A . n C 3 29 PRO 29 129 129 PRO PRO A . n C 3 30 ARG 30 130 130 ARG ARG A . n C 3 31 ARG 31 131 131 ARG ARG A . n C 3 32 CYS 32 132 132 CYS CYS A . n C 3 33 GLU 33 133 133 GLU GLU A . n C 3 34 LEU 34 134 134 LEU LEU A . n C 3 35 ALA 35 135 135 ALA ALA A . n C 3 36 ALA 36 136 136 ALA ALA A . n C 3 37 GLN 37 137 137 GLN GLN A . n C 3 38 LEU 38 138 138 LEU LEU A . n C 3 39 ASN 39 139 139 ASN ASN A . n C 3 40 LEU 40 140 140 LEU LEU A . n C 3 41 PRO 41 141 141 PRO PRO A . n C 3 42 GLU 42 142 142 GLU GLU A . n C 3 43 SER 43 143 143 SER SER A . n C 3 44 THR 44 144 144 THR THR A . n C 3 45 ILE 45 145 145 ILE ILE A . n C 3 46 LYS 46 146 146 LYS LYS A . n C 3 47 VAL 47 147 147 VAL VAL A . n C 3 48 TRP 48 148 148 TRP TRP A . n C 3 49 PHE 49 149 149 PHE PHE A . n C 3 50 GLN 50 150 150 GLN GLN A . n C 3 51 ASN 51 151 151 ASN ASN A . n C 3 52 ARG 52 152 152 ARG ARG A . n C 3 53 ARG 53 153 153 ARG ARG A . n C 3 54 MET 54 154 154 MET MET A . n C 3 55 LYS 55 155 155 LYS LYS A . n C 3 56 ASP 56 156 156 ASP ASP A . n C 3 57 LYS 57 157 157 LYS LYS A . n C 3 58 ARG 58 158 158 ARG ARG A . n C 3 59 GLN 59 159 159 GLN GLN A . n C 3 60 ARG 60 160 ? ? ? A . n D 3 1 VAL 1 301 ? ? ? B . n D 3 2 ARG 2 302 ? ? ? B . n D 3 3 ARG 3 303 303 ARG ARG B . n D 3 4 TYR 4 304 304 TYR TYR B . n D 3 5 ARG 5 305 305 ARG ARG B . n D 3 6 THR 6 306 306 THR THR B . n D 3 7 ALA 7 307 307 ALA ALA B . n D 3 8 PHE 8 308 308 PHE PHE B . n D 3 9 THR 9 309 309 THR THR B . n D 3 10 ARG 10 310 310 ARG ARG B . n D 3 11 ASP 11 311 311 ASP ASP B . n D 3 12 GLN 12 312 312 GLN GLN B . n D 3 13 LEU 13 313 313 LEU LEU B . n D 3 14 GLY 14 314 314 GLY GLY B . n D 3 15 ARG 15 315 315 ARG ARG B . n D 3 16 LEU 16 316 316 LEU LEU B . n D 3 17 GLU 17 317 317 GLU GLU B . n D 3 18 LYS 18 318 318 LYS LYS B . n D 3 19 GLU 19 319 319 GLU GLU B . n D 3 20 PHE 20 320 320 PHE PHE B . n D 3 21 TYR 21 321 321 TYR TYR B . n D 3 22 LYS 22 322 322 LYS LYS B . n D 3 23 GLU 23 323 323 GLU GLU B . n D 3 24 ASN 24 324 324 ASN ASN B . n D 3 25 TYR 25 325 325 TYR TYR B . n D 3 26 VAL 26 326 326 VAL VAL B . n D 3 27 SER 27 327 327 SER SER B . n D 3 28 ARG 28 328 328 ARG ARG B . n D 3 29 PRO 29 329 329 PRO PRO B . n D 3 30 ARG 30 330 330 ARG ARG B . n D 3 31 ARG 31 331 331 ARG ARG B . n D 3 32 CYS 32 332 332 CYS CYS B . n D 3 33 GLU 33 333 333 GLU GLU B . n D 3 34 LEU 34 334 334 LEU LEU B . n D 3 35 ALA 35 335 335 ALA ALA B . n D 3 36 ALA 36 336 336 ALA ALA B . n D 3 37 GLN 37 337 337 GLN GLN B . n D 3 38 LEU 38 338 338 LEU LEU B . n D 3 39 ASN 39 339 339 ASN ASN B . n D 3 40 LEU 40 340 340 LEU LEU B . n D 3 41 PRO 41 341 341 PRO PRO B . n D 3 42 GLU 42 342 342 GLU GLU B . n D 3 43 SER 43 343 343 SER SER B . n D 3 44 THR 44 344 344 THR THR B . n D 3 45 ILE 45 345 345 ILE ILE B . n D 3 46 LYS 46 346 346 LYS LYS B . n D 3 47 VAL 47 347 347 VAL VAL B . n D 3 48 TRP 48 348 348 TRP TRP B . n D 3 49 PHE 49 349 349 PHE PHE B . n D 3 50 GLN 50 350 350 GLN GLN B . n D 3 51 ASN 51 351 351 ASN ASN B . n D 3 52 ARG 52 352 352 ARG ARG B . n D 3 53 ARG 53 353 353 ARG ARG B . n D 3 54 MET 54 354 354 MET MET B . n D 3 55 LYS 55 355 355 LYS LYS B . n D 3 56 ASP 56 356 356 ASP ASP B . n D 3 57 LYS 57 357 357 LYS LYS B . n D 3 58 ARG 58 358 358 ARG ARG B . n D 3 59 GLN 59 359 359 GLN GLN B . n D 3 60 ARG 60 360 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 7 7 HOH WAT C . E 4 HOH 2 8 8 HOH WAT C . E 4 HOH 3 9 9 HOH WAT C . E 4 HOH 4 13 13 HOH WAT C . E 4 HOH 5 14 14 HOH WAT C . E 4 HOH 6 15 15 HOH WAT C . E 4 HOH 7 16 16 HOH WAT C . E 4 HOH 8 18 18 HOH WAT C . E 4 HOH 9 25 25 HOH WAT C . E 4 HOH 10 27 27 HOH WAT C . E 4 HOH 11 34 34 HOH WAT C . E 4 HOH 12 35 35 HOH WAT C . E 4 HOH 13 36 36 HOH WAT C . E 4 HOH 14 37 37 HOH WAT C . E 4 HOH 15 44 44 HOH WAT C . E 4 HOH 16 46 46 HOH WAT C . E 4 HOH 17 47 47 HOH WAT C . E 4 HOH 18 52 52 HOH WAT C . E 4 HOH 19 58 58 HOH WAT C . E 4 HOH 20 61 61 HOH WAT C . E 4 HOH 21 66 66 HOH WAT C . F 4 HOH 1 4 4 HOH WAT D . F 4 HOH 2 5 5 HOH WAT D . F 4 HOH 3 6 6 HOH WAT D . F 4 HOH 4 10 10 HOH WAT D . F 4 HOH 5 28 28 HOH WAT D . F 4 HOH 6 29 29 HOH WAT D . F 4 HOH 7 41 41 HOH WAT D . F 4 HOH 8 48 48 HOH WAT D . F 4 HOH 9 49 49 HOH WAT D . F 4 HOH 10 51 51 HOH WAT D . F 4 HOH 11 65 65 HOH WAT D . F 4 HOH 12 67 67 HOH WAT D . G 4 HOH 1 1 1 HOH WAT A . G 4 HOH 2 2 2 HOH WAT A . G 4 HOH 3 17 17 HOH WAT A . G 4 HOH 4 19 19 HOH WAT A . G 4 HOH 5 20 20 HOH WAT A . G 4 HOH 6 21 21 HOH WAT A . G 4 HOH 7 22 22 HOH WAT A . G 4 HOH 8 23 23 HOH WAT A . G 4 HOH 9 24 24 HOH WAT A . G 4 HOH 10 26 26 HOH WAT A . G 4 HOH 11 38 38 HOH WAT A . G 4 HOH 12 40 40 HOH WAT A . G 4 HOH 13 42 42 HOH WAT A . G 4 HOH 14 43 43 HOH WAT A . G 4 HOH 15 50 50 HOH WAT A . G 4 HOH 16 53 53 HOH WAT A . G 4 HOH 17 54 54 HOH WAT A . G 4 HOH 18 55 55 HOH WAT A . G 4 HOH 19 56 56 HOH WAT A . G 4 HOH 20 57 57 HOH WAT A . G 4 HOH 21 59 59 HOH WAT A . G 4 HOH 22 64 64 HOH WAT A . G 4 HOH 23 70 70 HOH WAT A . H 4 HOH 1 11 11 HOH WAT B . H 4 HOH 2 12 12 HOH WAT B . H 4 HOH 3 30 30 HOH WAT B . H 4 HOH 4 31 31 HOH WAT B . H 4 HOH 5 32 32 HOH WAT B . H 4 HOH 6 39 39 HOH WAT B . H 4 HOH 7 45 45 HOH WAT B . H 4 HOH 8 60 60 HOH WAT B . H 4 HOH 9 62 62 HOH WAT B . H 4 HOH 10 63 63 HOH WAT B . H 4 HOH 11 68 68 HOH WAT B . H 4 HOH 12 69 69 HOH WAT B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 DENZO 'data reduction' . ? 3 CCP4 'data scaling' '(AGROVATA' ? 4 ROTAVATA 'data scaling' . ? 5 X-PLOR phasing . ? 6 # _cell.entry_id 1JGG _cell.length_a 34.060 _cell.length_b 61.610 _cell.length_c 39.990 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JGG _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 1JGG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 37.36 _exptl_crystal.density_Matthews 1.96 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'sodium acetate, potassium chloride, DTT, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'sodium acetate' ? ? ? 1 2 1 'potassium chloride' ? ? ? 1 3 1 DTT ? ? ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 283 ? 1 2 277 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' FUJI ? ? 2 'IMAGE PLATE' FUJI ? ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'PHOTON FACTORY BEAMLINE BL-6A' ? 'Photon Factory' BL-6A ? 2 SYNCHROTRON 'NSLS BEAMLINE X4A' ? NSLS X4A ? # _reflns.entry_id 1JGG _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 15 _reflns.d_resolution_high 2.0 _reflns.number_obs 8613 _reflns.number_all 8613 _reflns.percent_possible_obs 77.1 _reflns.pdbx_Rmerge_I_obs 0.0760000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.4 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.11 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 52.4 _reflns_shell.Rmerge_I_obs 0.1860000 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 1.3 _reflns_shell.number_unique_all 837 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1JGG _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 8 _refine.ls_d_res_high 2 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2290000 _refine.ls_R_factor_R_free 0.3160000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1063 _refine_hist.pdbx_number_atoms_nucleic_acid 410 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 1541 _refine_hist.d_res_high 2 _refine_hist.d_res_low 8 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d .016 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.56 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1JGG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1JGG _struct.title 'Even-skipped Homeodomain Complexed to AT-rich DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1JGG _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'EVEN-SKIPPED, HOMEODOMAIN, PROTEIN-DNA COMPLEX, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP EVE_DROME P06602 3 70 ? ? 2 PDB 1JGG 1JGG 1 ? ? ? 3 PDB 1JGG 1JGG 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1JGG A 1 ? 60 ? P06602 70 ? 129 ? 101 160 2 1 1JGG B 1 ? 60 ? P06602 70 ? 129 ? 301 360 3 2 1JGG C 1 ? 10 ? 1JGG 201 ? 210 ? 201 210 4 3 1JGG D 1 ? 10 ? 1JGG 211 ? 220 ? 211 220 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 9 ? GLU C 23 ? THR A 109 GLU A 123 1 ? 15 HELX_P HELX_P2 2 SER C 27 ? ASN C 39 ? SER A 127 ASN A 139 1 ? 13 HELX_P HELX_P3 3 PRO C 41 ? GLN C 59 ? PRO A 141 GLN A 159 1 ? 19 HELX_P HELX_P4 4 THR D 9 ? GLU D 23 ? THR B 309 GLU B 323 1 ? 15 HELX_P HELX_P5 5 SER D 27 ? ASN D 39 ? SER B 327 ASN B 339 1 ? 13 HELX_P HELX_P6 6 PRO D 41 ? GLN D 59 ? PRO B 341 GLN B 359 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DA 10 N1 ? ? C DT 201 D DA 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DA 10 N6 ? ? C DT 201 D DA 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 9 N3 ? ? C DA 202 D DT 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 9 O4 ? ? C DA 202 D DT 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 203 D DT 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 203 D DT 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 7 N1 ? ? C DT 204 D DA 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 7 N6 ? ? C DT 204 D DA 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 6 N1 ? ? C DT 205 D DA 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 6 N6 ? ? C DT 205 D DA 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 5 N3 ? ? C DG 206 D DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 5 O2 ? ? C DG 206 D DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 5 N4 ? ? C DG 206 D DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 4 N3 ? ? C DA 207 D DT 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 4 O4 ? ? C DA 207 D DT 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 3 N3 ? ? C DA 208 D DT 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 3 O4 ? ? C DA 208 D DT 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 2 N1 ? ? C DT 209 D DA 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 2 N6 ? ? C DT 209 D DA 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 1 N1 ? ? C DT 210 D DA 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 1 N6 ? ? C DT 210 D DA 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DT 210 ? ? "C1'" C DT 210 ? ? N1 C DT 210 ? ? 110.32 108.30 2.02 0.30 N 2 1 "O4'" D DA 217 ? ? "C1'" D DA 217 ? ? N9 D DA 217 ? ? 110.56 108.30 2.26 0.30 N 3 1 "O4'" D DT 219 ? ? "C1'" D DT 219 ? ? N1 D DT 219 ? ? 110.18 108.30 1.88 0.30 N 4 1 N B TYR 304 ? ? CA B TYR 304 ? ? C B TYR 304 ? ? 127.51 111.00 16.51 2.70 N 5 1 N B ARG 305 ? ? CA B ARG 305 ? ? C B ARG 305 ? ? 130.72 111.00 19.72 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 104 ? ? 177.10 -152.77 2 1 ARG A 105 ? ? 147.12 81.94 3 1 TYR B 304 ? ? -170.05 -161.74 4 1 ARG B 305 ? ? 138.42 103.97 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT C 210 ? ? 0.091 'SIDE CHAIN' 2 1 DT D 214 ? ? 0.091 'SIDE CHAIN' 3 1 DA D 217 ? ? 0.054 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 101 ? C VAL 1 2 1 Y 1 A ARG 102 ? C ARG 2 3 1 Y 1 A ARG 160 ? C ARG 60 4 1 Y 1 B VAL 301 ? D VAL 1 5 1 Y 1 B ARG 302 ? D ARG 2 6 1 Y 1 B ARG 360 ? D ARG 60 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 MET N N N N 352 MET CA C N S 353 MET C C N N 354 MET O O N N 355 MET CB C N N 356 MET CG C N N 357 MET SD S N N 358 MET CE C N N 359 MET OXT O N N 360 MET H H N N 361 MET H2 H N N 362 MET HA H N N 363 MET HB2 H N N 364 MET HB3 H N N 365 MET HG2 H N N 366 MET HG3 H N N 367 MET HE1 H N N 368 MET HE2 H N N 369 MET HE3 H N N 370 MET HXT H N N 371 PHE N N N N 372 PHE CA C N S 373 PHE C C N N 374 PHE O O N N 375 PHE CB C N N 376 PHE CG C Y N 377 PHE CD1 C Y N 378 PHE CD2 C Y N 379 PHE CE1 C Y N 380 PHE CE2 C Y N 381 PHE CZ C Y N 382 PHE OXT O N N 383 PHE H H N N 384 PHE H2 H N N 385 PHE HA H N N 386 PHE HB2 H N N 387 PHE HB3 H N N 388 PHE HD1 H N N 389 PHE HD2 H N N 390 PHE HE1 H N N 391 PHE HE2 H N N 392 PHE HZ H N N 393 PHE HXT H N N 394 PRO N N N N 395 PRO CA C N S 396 PRO C C N N 397 PRO O O N N 398 PRO CB C N N 399 PRO CG C N N 400 PRO CD C N N 401 PRO OXT O N N 402 PRO H H N N 403 PRO HA H N N 404 PRO HB2 H N N 405 PRO HB3 H N N 406 PRO HG2 H N N 407 PRO HG3 H N N 408 PRO HD2 H N N 409 PRO HD3 H N N 410 PRO HXT H N N 411 SER N N N N 412 SER CA C N S 413 SER C C N N 414 SER O O N N 415 SER CB C N N 416 SER OG O N N 417 SER OXT O N N 418 SER H H N N 419 SER H2 H N N 420 SER HA H N N 421 SER HB2 H N N 422 SER HB3 H N N 423 SER HG H N N 424 SER HXT H N N 425 THR N N N N 426 THR CA C N S 427 THR C C N N 428 THR O O N N 429 THR CB C N R 430 THR OG1 O N N 431 THR CG2 C N N 432 THR OXT O N N 433 THR H H N N 434 THR H2 H N N 435 THR HA H N N 436 THR HB H N N 437 THR HG1 H N N 438 THR HG21 H N N 439 THR HG22 H N N 440 THR HG23 H N N 441 THR HXT H N N 442 TRP N N N N 443 TRP CA C N S 444 TRP C C N N 445 TRP O O N N 446 TRP CB C N N 447 TRP CG C Y N 448 TRP CD1 C Y N 449 TRP CD2 C Y N 450 TRP NE1 N Y N 451 TRP CE2 C Y N 452 TRP CE3 C Y N 453 TRP CZ2 C Y N 454 TRP CZ3 C Y N 455 TRP CH2 C Y N 456 TRP OXT O N N 457 TRP H H N N 458 TRP H2 H N N 459 TRP HA H N N 460 TRP HB2 H N N 461 TRP HB3 H N N 462 TRP HD1 H N N 463 TRP HE1 H N N 464 TRP HE3 H N N 465 TRP HZ2 H N N 466 TRP HZ3 H N N 467 TRP HH2 H N N 468 TRP HXT H N N 469 TYR N N N N 470 TYR CA C N S 471 TYR C C N N 472 TYR O O N N 473 TYR CB C N N 474 TYR CG C Y N 475 TYR CD1 C Y N 476 TYR CD2 C Y N 477 TYR CE1 C Y N 478 TYR CE2 C Y N 479 TYR CZ C Y N 480 TYR OH O N N 481 TYR OXT O N N 482 TYR H H N N 483 TYR H2 H N N 484 TYR HA H N N 485 TYR HB2 H N N 486 TYR HB3 H N N 487 TYR HD1 H N N 488 TYR HD2 H N N 489 TYR HE1 H N N 490 TYR HE2 H N N 491 TYR HH H N N 492 TYR HXT H N N 493 VAL N N N N 494 VAL CA C N S 495 VAL C C N N 496 VAL O O N N 497 VAL CB C N N 498 VAL CG1 C N N 499 VAL CG2 C N N 500 VAL OXT O N N 501 VAL H H N N 502 VAL H2 H N N 503 VAL HA H N N 504 VAL HB H N N 505 VAL HG11 H N N 506 VAL HG12 H N N 507 VAL HG13 H N N 508 VAL HG21 H N N 509 VAL HG22 H N N 510 VAL HG23 H N N 511 VAL HXT H N N 512 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 PHE N CA sing N N 365 PHE N H sing N N 366 PHE N H2 sing N N 367 PHE CA C sing N N 368 PHE CA CB sing N N 369 PHE CA HA sing N N 370 PHE C O doub N N 371 PHE C OXT sing N N 372 PHE CB CG sing N N 373 PHE CB HB2 sing N N 374 PHE CB HB3 sing N N 375 PHE CG CD1 doub Y N 376 PHE CG CD2 sing Y N 377 PHE CD1 CE1 sing Y N 378 PHE CD1 HD1 sing N N 379 PHE CD2 CE2 doub Y N 380 PHE CD2 HD2 sing N N 381 PHE CE1 CZ doub Y N 382 PHE CE1 HE1 sing N N 383 PHE CE2 CZ sing Y N 384 PHE CE2 HE2 sing N N 385 PHE CZ HZ sing N N 386 PHE OXT HXT sing N N 387 PRO N CA sing N N 388 PRO N CD sing N N 389 PRO N H sing N N 390 PRO CA C sing N N 391 PRO CA CB sing N N 392 PRO CA HA sing N N 393 PRO C O doub N N 394 PRO C OXT sing N N 395 PRO CB CG sing N N 396 PRO CB HB2 sing N N 397 PRO CB HB3 sing N N 398 PRO CG CD sing N N 399 PRO CG HG2 sing N N 400 PRO CG HG3 sing N N 401 PRO CD HD2 sing N N 402 PRO CD HD3 sing N N 403 PRO OXT HXT sing N N 404 SER N CA sing N N 405 SER N H sing N N 406 SER N H2 sing N N 407 SER CA C sing N N 408 SER CA CB sing N N 409 SER CA HA sing N N 410 SER C O doub N N 411 SER C OXT sing N N 412 SER CB OG sing N N 413 SER CB HB2 sing N N 414 SER CB HB3 sing N N 415 SER OG HG sing N N 416 SER OXT HXT sing N N 417 THR N CA sing N N 418 THR N H sing N N 419 THR N H2 sing N N 420 THR CA C sing N N 421 THR CA CB sing N N 422 THR CA HA sing N N 423 THR C O doub N N 424 THR C OXT sing N N 425 THR CB OG1 sing N N 426 THR CB CG2 sing N N 427 THR CB HB sing N N 428 THR OG1 HG1 sing N N 429 THR CG2 HG21 sing N N 430 THR CG2 HG22 sing N N 431 THR CG2 HG23 sing N N 432 THR OXT HXT sing N N 433 TRP N CA sing N N 434 TRP N H sing N N 435 TRP N H2 sing N N 436 TRP CA C sing N N 437 TRP CA CB sing N N 438 TRP CA HA sing N N 439 TRP C O doub N N 440 TRP C OXT sing N N 441 TRP CB CG sing N N 442 TRP CB HB2 sing N N 443 TRP CB HB3 sing N N 444 TRP CG CD1 doub Y N 445 TRP CG CD2 sing Y N 446 TRP CD1 NE1 sing Y N 447 TRP CD1 HD1 sing N N 448 TRP CD2 CE2 doub Y N 449 TRP CD2 CE3 sing Y N 450 TRP NE1 CE2 sing Y N 451 TRP NE1 HE1 sing N N 452 TRP CE2 CZ2 sing Y N 453 TRP CE3 CZ3 doub Y N 454 TRP CE3 HE3 sing N N 455 TRP CZ2 CH2 doub Y N 456 TRP CZ2 HZ2 sing N N 457 TRP CZ3 CH2 sing Y N 458 TRP CZ3 HZ3 sing N N 459 TRP CH2 HH2 sing N N 460 TRP OXT HXT sing N N 461 TYR N CA sing N N 462 TYR N H sing N N 463 TYR N H2 sing N N 464 TYR CA C sing N N 465 TYR CA CB sing N N 466 TYR CA HA sing N N 467 TYR C O doub N N 468 TYR C OXT sing N N 469 TYR CB CG sing N N 470 TYR CB HB2 sing N N 471 TYR CB HB3 sing N N 472 TYR CG CD1 doub Y N 473 TYR CG CD2 sing Y N 474 TYR CD1 CE1 sing Y N 475 TYR CD1 HD1 sing N N 476 TYR CD2 CE2 doub Y N 477 TYR CD2 HD2 sing N N 478 TYR CE1 CZ doub Y N 479 TYR CE1 HE1 sing N N 480 TYR CE2 CZ sing Y N 481 TYR CE2 HE2 sing N N 482 TYR CZ OH sing N N 483 TYR OH HH sing N N 484 TYR OXT HXT sing N N 485 VAL N CA sing N N 486 VAL N H sing N N 487 VAL N H2 sing N N 488 VAL CA C sing N N 489 VAL CA CB sing N N 490 VAL CA HA sing N N 491 VAL C O doub N N 492 VAL C OXT sing N N 493 VAL CB CG1 sing N N 494 VAL CB CG2 sing N N 495 VAL CB HB sing N N 496 VAL CG1 HG11 sing N N 497 VAL CG1 HG12 sing N N 498 VAL CG1 HG13 sing N N 499 VAL CG2 HG21 sing N N 500 VAL CG2 HG22 sing N N 501 VAL CG2 HG23 sing N N 502 VAL OXT HXT sing N N 503 # _ndb_struct_conf_na.entry_id 1JGG _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 B DA 10 1_555 -0.401 -0.134 -0.966 5.892 -10.523 11.362 1 C_DT201:DA220_D C 201 ? D 220 ? 20 1 1 A DA 2 1_555 B DT 9 1_555 0.146 -0.264 -0.385 -9.293 -20.041 0.685 2 C_DA202:DT219_D C 202 ? D 219 ? 20 1 1 A DA 3 1_555 B DT 8 1_555 -0.492 -0.239 0.574 1.135 -7.240 4.944 3 C_DA203:DT218_D C 203 ? D 218 ? 20 1 1 A DT 4 1_555 B DA 7 1_555 0.293 -0.293 -0.074 1.841 -7.656 1.172 4 C_DT204:DA217_D C 204 ? D 217 ? 20 1 1 A DT 5 1_555 B DA 6 1_555 0.033 -0.165 -0.224 -1.372 -20.888 1.599 5 C_DT205:DA216_D C 205 ? D 216 ? 20 1 1 A DG 6 1_555 B DC 5 1_555 0.146 0.027 0.452 8.063 -6.345 10.122 6 C_DG206:DC215_D C 206 ? D 215 ? 19 1 1 A DA 7 1_555 B DT 4 1_555 0.439 -0.228 0.471 3.675 -12.029 7.060 7 C_DA207:DT214_D C 207 ? D 214 ? 20 1 1 A DA 8 1_555 B DT 3 1_555 -0.251 0.154 0.050 -0.763 -12.905 5.863 8 C_DA208:DT213_D C 208 ? D 213 ? 20 1 1 A DT 9 1_555 B DA 2 1_555 0.367 -0.307 0.290 -1.272 -13.276 0.575 9 C_DT209:DA212_D C 209 ? D 212 ? 20 1 1 A DT 10 1_555 B DA 1 1_555 -0.034 -0.424 -0.356 -0.219 -14.105 -7.933 10 C_DT210:DA211_D C 210 ? D 211 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 B DA 10 1_555 A DA 2 1_555 B DT 9 1_555 -1.349 1.932 3.857 -10.256 5.965 42.025 1.873 0.565 4.280 8.125 13.970 43.595 1 CC_DT201DA202:DT219DA220_DD C 201 ? D 220 ? C 202 ? D 219 ? 1 A DA 2 1_555 B DT 9 1_555 A DA 3 1_555 B DT 8 1_555 0.539 -0.171 2.852 -9.876 1.198 32.076 -0.464 -2.310 2.571 2.107 17.358 33.545 2 CC_DA202DA203:DT218DT219_DD C 202 ? D 219 ? C 203 ? D 218 ? 1 A DA 3 1_555 B DT 8 1_555 A DT 4 1_555 B DA 7 1_555 -0.591 -0.437 3.523 1.410 -2.263 37.023 -0.361 1.131 3.519 -3.558 -2.217 37.116 3 CC_DA203DT204:DA217DT218_DD C 203 ? D 218 ? C 204 ? D 217 ? 1 A DT 4 1_555 B DA 7 1_555 A DT 5 1_555 B DA 6 1_555 -0.537 -0.437 3.382 2.499 1.473 32.124 -1.055 1.423 3.309 2.655 -4.504 32.251 4 CC_DT204DT205:DA216DA217_DD C 204 ? D 217 ? C 205 ? D 216 ? 1 A DT 5 1_555 B DA 6 1_555 A DG 6 1_555 B DC 5 1_555 1.330 1.245 3.170 -2.006 1.345 38.788 1.714 -2.235 3.139 2.022 3.017 38.861 5 CC_DT205DG206:DC215DA216_DD C 205 ? D 216 ? C 206 ? D 215 ? 1 A DG 6 1_555 B DC 5 1_555 A DA 7 1_555 B DT 4 1_555 -1.010 1.377 3.653 -1.703 -4.686 40.989 2.507 1.231 3.519 -6.662 2.421 41.278 6 CC_DG206DA207:DT214DC215_DD C 206 ? D 215 ? C 207 ? D 214 ? 1 A DA 7 1_555 B DT 4 1_555 A DA 8 1_555 B DT 3 1_555 0.031 -0.366 3.375 -0.141 6.619 30.960 -1.919 -0.084 3.229 12.224 0.261 31.643 7 CC_DA207DA208:DT213DT214_DD C 207 ? D 214 ? C 208 ? D 213 ? 1 A DA 8 1_555 B DT 3 1_555 A DT 9 1_555 B DA 2 1_555 -0.727 -0.438 3.299 -5.446 -2.610 37.729 -0.331 0.405 3.389 -4.005 8.356 38.192 8 CC_DA208DT209:DA212DT213_DD C 208 ? D 213 ? C 209 ? D 212 ? 1 A DT 9 1_555 B DA 2 1_555 A DT 10 1_555 B DA 1 1_555 -0.370 -0.242 3.299 6.632 2.036 29.367 -0.877 2.055 3.119 3.946 -12.856 30.158 9 CC_DT209DT210:DA211DA212_DD C 209 ? D 212 ? C 210 ? D 211 ? # _atom_sites.entry_id 1JGG _atom_sites.fract_transf_matrix[1][1] 0.029360 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016231 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025006 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_