HEADER COMPLEX(ANTIBODY-ANTIGEN) 04-MAY-93 1JHL TITLE THREE-DIMENSIONAL STRUCTURE OF A HETEROCLITIC ANTIGEN-ANTIBODY CROSS- TITLE 2 REACTION COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG1-KAPPA D11.15 FV (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IGG1-KAPPA D11.15 FV (HEAVY CHAIN); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: PHEASANT EGG WHITE LYSOZYME; COMPND 11 CHAIN: A; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: PHASIANUS COLCHICUS; SOURCE 11 ORGANISM_COMMON: RING-NECKED PHEASANT; SOURCE 12 ORGANISM_TAXID: 9054 KEYWDS COMPLEX(ANTIBODY-ANTIGEN) EXPDTA X-RAY DIFFRACTION AUTHOR V.CHITARRA,P.M.ALZARI,G.A.BENTLEY,T.N.BHAT,J.-L.EISELE,R.J.POLJAK REVDAT 5 09-OCT-24 1JHL 1 REMARK REVDAT 4 05-JUN-24 1JHL 1 SEQADV REVDAT 3 24-FEB-09 1JHL 1 VERSN REVDAT 2 01-APR-03 1JHL 1 JRNL REVDAT 1 31-JAN-94 1JHL 0 JRNL AUTH V.CHITARRA,P.M.ALZARI,G.A.BENTLEY,T.N.BHAT,J.L.EISELE, JRNL AUTH 2 A.HOUDUSSE,J.LESCAR,H.SOUCHON,R.J.POLJAK JRNL TITL THREE-DIMENSIONAL STRUCTURE OF A HETEROCLITIC JRNL TITL 2 ANTIGEN-ANTIBODY CROSS-REACTION COMPLEX. JRNL REF PROC.NATL.ACAD.SCI.USA V. 90 7711 1993 JRNL REFN ISSN 0027-8424 JRNL PMID 8356074 JRNL DOI 10.1073/PNAS.90.16.7711 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 16483 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2745 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 4.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JHL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000174330. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 188.06667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 94.03333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 141.05000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 47.01667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 235.08333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 77 NE2 HIS A 77 CD2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU L 4 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 TRP L 35 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 TYR L 36 CB - CG - CD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 SER L 67 N - CA - CB ANGL. DEV. = -9.8 DEGREES REMARK 500 SER L 77 CA - C - N ANGL. DEV. = -14.9 DEGREES REMARK 500 TRP L 96 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP L 96 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP L 96 CG - CD2 - CE3 ANGL. DEV. = 5.7 DEGREES REMARK 500 TYR H 27 CB - CG - CD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 TRP H 33 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP H 33 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 TRP H 36 CD1 - CG - CD2 ANGL. DEV. = 8.6 DEGREES REMARK 500 TRP H 36 CG - CD1 - NE1 ANGL. DEV. = -8.7 DEGREES REMARK 500 TRP H 36 CD1 - NE1 - CE2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP H 36 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 VAL H 37 CG1 - CB - CG2 ANGL. DEV. = -11.1 DEGREES REMARK 500 LEU H 45 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 TRP H 47 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP H 47 CG - CD1 - NE1 ANGL. DEV. = -7.1 DEGREES REMARK 500 TRP H 47 CD1 - NE1 - CE2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP H 47 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 TYR H 57 CD1 - CG - CD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 TYR H 57 CB - CG - CD1 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG H 98 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 TYR H 107 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 TRP H 108 CD1 - CG - CD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 TRP H 108 CE2 - CD2 - CG ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 5 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 14 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A 21 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 TRP A 28 CD1 - CG - CD2 ANGL. DEV. = 8.4 DEGREES REMARK 500 TRP A 28 CG - CD1 - NE1 ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP A 28 CD2 - CE2 - CZ2 ANGL. DEV. = -8.7 DEGREES REMARK 500 TRP A 28 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 GLU A 35 CA - C - N ANGL. DEV. = 13.3 DEGREES REMARK 500 PHE A 38 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 TRP A 62 CD1 - CG - CD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 TRP A 62 CB - CG - CD1 ANGL. DEV. = -9.3 DEGREES REMARK 500 TRP A 62 CE2 - CD2 - CG ANGL. DEV. = -6.8 DEGREES REMARK 500 TRP A 62 CG - CD2 - CE3 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP A 63 CD1 - CG - CD2 ANGL. DEV. = 8.3 DEGREES REMARK 500 TRP A 63 CB - CG - CD1 ANGL. DEV. = -8.2 DEGREES REMARK 500 TRP A 63 CG - CD1 - NE1 ANGL. DEV. = -7.5 DEGREES REMARK 500 TRP A 63 CE2 - CD2 - CG ANGL. DEV. = -7.2 DEGREES REMARK 500 TRP A 63 CG - CD2 - CE3 ANGL. DEV. = 6.5 DEGREES REMARK 500 CYS A 64 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 ASN A 65 CA - C - N ANGL. DEV. = -15.1 DEGREES REMARK 500 ARG A 68 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 68 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 LEU A 84 CA - CB - CG ANGL. DEV. = 17.3 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 61 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER L 30 31.44 29.58 REMARK 500 LYS L 31 1.40 82.81 REMARK 500 SER L 50 79.60 55.21 REMARK 500 SER L 60 -24.56 -38.18 REMARK 500 SER L 67 -52.34 -138.75 REMARK 500 SER L 77 79.37 9.49 REMARK 500 ASP L 82 56.50 -95.78 REMARK 500 ASP H 55 6.90 -151.39 REMARK 500 SER H 56 25.09 47.33 REMARK 500 SER H 85 80.37 37.37 REMARK 500 ALA H 92 -163.87 -165.84 REMARK 500 ASN H 101 -12.86 101.32 REMARK 500 LEU A 56 48.66 -109.30 REMARK 500 GLN A 57 68.39 -0.96 REMARK 500 TRP A 62 -53.94 -121.60 REMARK 500 HIS A 77 75.29 57.55 REMARK 500 CYS A 80 -31.73 -39.83 REMARK 500 ILE A 88 1.53 -60.10 REMARK 500 VAL A 99 -9.63 -59.83 REMARK 500 ASP A 103 -38.74 -177.64 REMARK 500 ALA A 107 0.74 -69.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN A 65 10.58 REMARK 500 REMARK 500 REMARK: NULL DBREF 1JHL L 1 108 GB 196740 AAA38772 21 128 DBREF 1JHL A 1 129 UNP P00702 LYSC_PHACO 19 147 DBREF 1JHL H 1 116 PDB 1JHL 1JHL 1 116 SEQADV 1JHL ILE L 2 GB 196740 VAL 22 CONFLICT SEQADV 1JHL GLU L 3 GB 196740 GLN 23 CONFLICT SEQADV 1JHL LEU L 4 GB 196740 ILE 24 CONFLICT SEQADV 1JHL VAL L 12 GB 196740 PRO 32 CONFLICT SEQADV 1JHL SER L 14 GB 196740 ALA 34 CONFLICT SEQADV 1JHL SER L 32 GB 196740 TYR 52 CONFLICT SEQADV 1JHL ASN L 45 GB 196740 LYS 65 CONFLICT SEQADV 1JHL SER L 65 GB 196740 ASN 85 CONFLICT SEQADV 1JHL ILE L 87 GB 196740 TYR 107 CONFLICT SEQADV 1JHL ASP A 103 UNP P00702 ASN 121 CONFLICT SEQRES 1 L 108 ASP ILE GLU LEU THR GLN SER PRO SER TYR LEU VAL ALA SEQRES 2 L 108 SER PRO GLY GLU THR ILE THR ILE ASN CYS ARG ALA SER SEQRES 3 L 108 LYS SER ILE SER LYS SER LEU ALA TRP TYR GLN GLU LYS SEQRES 4 L 108 PRO GLY LYS THR ASN ASN LEU LEU ILE TYR SER GLY SER SEQRES 5 L 108 THR LEU GLN SER GLY ILE PRO SER ARG PHE SER GLY SER SEQRES 6 L 108 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 108 GLU PRO GLU ASP PHE ALA MET TYR ILE CYS GLN GLN HIS SEQRES 8 L 108 ASN GLU TYR PRO TRP THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 108 GLU ILE LYS ARG SEQRES 1 H 116 GLN VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL ARG SEQRES 2 H 116 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 H 116 TYR THR PHE ILE SER TYR TRP ILE ASN TRP VAL LYS GLN SEQRES 4 H 116 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY ASN ILE TYR SEQRES 5 H 116 PRO SER ASP SER TYR THR ASN TYR ASN GLN LYS PHE LYS SEQRES 6 H 116 ASP LYS ALA THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 H 116 ALA TYR MET GLN LEU SER SER PRO THR SER GLU ASP SER SEQRES 8 H 116 ALA VAL TYR TYR CYS THR ARG ASP ASP ASN TYR GLY ALA SEQRES 9 H 116 MET ASP TYR TRP GLY GLN GLY THR THR VAL THR VAL SEQRES 1 A 129 LYS VAL TYR GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG MET GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLY ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER LYS ASN LEU CYS HIS ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASP GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG LYS HIS CYS LYS GLY SEQRES 10 A 129 THR ASP VAL ASN VAL TRP ILE ARG GLY CYS ARG LEU HELIX 1 1 THR H 28 TYR H 32 5 5 HELIX 2 2 THR H 87 SER H 91 5 5 HELIX 3 3 GLY A 4 MET A 15 1 12 HELIX 4 4 SER A 24 SER A 36 1 13 HELIX 5 5 CYS A 80 SER A 85 5 6 HELIX 6 6 ILE A 88 SER A 100 1 13 HELIX 7 7 ASP A 103 ALA A 107 5 5 HELIX 8 8 TRP A 108 CYS A 115 1 8 HELIX 9 9 ASP A 119 ILE A 124 5 6 SHEET 1 A 4 LEU L 4 SER L 7 0 SHEET 2 A 4 ILE L 19 ALA L 25 -1 O ASN L 22 N SER L 7 SHEET 3 A 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 A 4 PHE L 62 GLY L 66 -1 N SER L 63 O THR L 74 SHEET 1 B 5 THR L 53 LEU L 54 0 SHEET 2 B 5 ASN L 45 TYR L 49 -1 N TYR L 49 O THR L 53 SHEET 3 B 5 LEU L 33 GLU L 38 -1 N TRP L 35 O ILE L 48 SHEET 4 B 5 MET L 85 GLN L 90 -1 O MET L 85 N GLU L 38 SHEET 5 B 5 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 C 6 THR L 53 LEU L 54 0 SHEET 2 C 6 ASN L 45 TYR L 49 -1 N TYR L 49 O THR L 53 SHEET 3 C 6 LEU L 33 GLU L 38 -1 N TRP L 35 O ILE L 48 SHEET 4 C 6 MET L 85 GLN L 90 -1 O MET L 85 N GLU L 38 SHEET 5 C 6 THR L 102 ILE L 106 -1 O THR L 102 N TYR L 86 SHEET 6 C 6 TYR L 10 ALA L 13 1 O LEU L 11 N GLU L 105 SHEET 1 D 4 GLN H 3 GLN H 6 0 SHEET 2 D 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 D 4 THR H 78 LEU H 83 -1 O ALA H 79 N CYS H 22 SHEET 4 D 4 ALA H 68 ASP H 73 -1 O THR H 69 N GLN H 82 SHEET 1 E 5 THR H 58 TYR H 60 0 SHEET 2 E 5 LEU H 45 ILE H 51 -1 N ASN H 50 O ASN H 59 SHEET 3 E 5 ILE H 34 GLN H 39 -1 N ILE H 34 O ILE H 51 SHEET 4 E 5 ALA H 92 ASP H 99 -1 N VAL H 93 O GLN H 39 SHEET 5 E 5 MET H 105 TRP H 108 -1 N ASP H 106 O ARG H 98 SHEET 1 F 6 THR H 58 TYR H 60 0 SHEET 2 F 6 LEU H 45 ILE H 51 -1 N ASN H 50 O ASN H 59 SHEET 3 F 6 ILE H 34 GLN H 39 -1 N ILE H 34 O ILE H 51 SHEET 4 F 6 ALA H 92 ASP H 99 -1 N VAL H 93 O GLN H 39 SHEET 5 F 6 THR H 112 THR H 115 -1 O THR H 112 N TYR H 94 SHEET 6 F 6 GLU H 10 LEU H 11 1 O GLU H 10 N THR H 115 SHEET 1 G 3 THR A 43 ARG A 45 0 SHEET 2 G 3 THR A 51 TYR A 53 -1 N ASP A 52 O ASN A 44 SHEET 3 G 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS L 23 CYS L 88 1555 1555 1.99 SSBOND 2 CYS H 22 CYS H 96 1555 1555 2.02 SSBOND 3 CYS A 6 CYS A 127 1555 1555 2.04 SSBOND 4 CYS A 30 CYS A 115 1555 1555 2.01 SSBOND 5 CYS A 64 CYS A 80 1555 1555 2.02 SSBOND 6 CYS A 76 CYS A 94 1555 1555 2.01 CISPEP 1 SER L 7 PRO L 8 0 -0.63 CISPEP 2 TYR L 94 PRO L 95 0 -14.00 CRYST1 57.800 57.800 282.100 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017301 0.009989 0.000000 0.00000 SCALE2 0.000000 0.019978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003545 0.00000