HEADER METAL TRANSPORT 29-JUN-01 1JI5 TITLE DLP-1 FROM BACILLUS ANTHRACIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DLP-1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 GENE: DLP-1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSM214G KEYWDS DODECAMER, FOUR-HELIX BUNDLE, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR E.PAPINUTTO,W.G.DUNDON,N.PITULIS,R.BATTISTUTTA,C.MONTECUCCO,G.ZANOTTI REVDAT 5 03-APR-24 1JI5 1 REMARK REVDAT 4 07-FEB-24 1JI5 1 REMARK LINK REVDAT 3 13-JUL-11 1JI5 1 VERSN REVDAT 2 24-FEB-09 1JI5 1 VERSN REVDAT 1 19-JUN-02 1JI5 0 JRNL AUTH E.PAPINUTTO,W.G.DUNDON,N.PITULIS,R.BATTISTUTTA,C.MONTECUCCO, JRNL AUTH 2 G.ZANOTTI JRNL TITL STRUCTURE OF TWO IRON-BINDING PROTEINS FROM BACILLUS JRNL TITL 2 ANTHRACIS. JRNL REF J.BIOL.CHEM. V. 277 15093 2002 JRNL REFN ISSN 0021-9258 JRNL PMID 11836250 JRNL DOI 10.1074/JBC.M112378200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.A.GRANT,D.J.FILMAN,S.E.FINKEL,R.KOLTER,J.M.HOGLE REMARK 1 TITL THE CRYSTAL STRUCTURE OF DPS, A FERRITIN HOMOLOG THAT BINDS REMARK 1 TITL 2 AND PROTECTS DNA REMARK 1 REF NAT.STRUCT.BIOL. V. 5 294 1998 REMARK 1 REFN ISSN 1072-8368 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.ILARI,S.STEFANINI,E.CHIANCONE,D.TSERNOGLOU REMARK 1 TITL THE DODECAMERIC FERRITIN FROM LISTERIA INNOCUA CONTAINS A REMARK 1 TITL 2 NOVEL INTERSUBUNIT IRON-BINDING SITE REMARK 1 REF NAT.STRUCT.BIOL. V. 7 38 2000 REMARK 1 REFN ISSN 1072-8368 REMARK 1 DOI 10.1038/71236 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2598111.610 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 20676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1414 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3280 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE : 0.3400 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 236 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.022 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4612 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 149 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.47000 REMARK 3 B22 (A**2) : 3.47000 REMARK 3 B33 (A**2) : -6.94000 REMARK 3 B12 (A**2) : 5.52000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.44 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.47 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.48 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.740 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.917 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.991 ; 3.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.313 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.629 ; 4.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 65.39 REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : 0.032 ; 300 REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; 10 REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : MPD.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NON-CRYSTALLOGRAPHIC SYMMETRRY WAS REMARK 3 IMPOSED TO THE FOUR SUBUNITS DURING THE REFINEMENT REMARK 4 REMARK 4 1JI5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-01. REMARK 100 THE DEPOSITION ID IS D_1000013799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20677 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: HP-NAP MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM ACETATE, CITRATE BUFFER, MPD, REMARK 280 PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.61200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.75675 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 70.05500 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 44.61200 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 25.75675 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 70.05500 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 44.61200 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 25.75675 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.05500 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.51350 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 140.11000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 51.51350 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 140.11000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 51.51350 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 140.11000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DODECAMER GENERATED FROM THE REMARK 300 TETRAMER IN THE ASYMMETRIC UNIT BY THE OPERATIONS: -Y, X-Y, Z AND - REMARK 300 X+Y, -X, Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 37190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -437.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 17 O HOH A 167 2.01 REMARK 500 OE1 GLU C 55 O HOH C 156 2.16 REMARK 500 OG1 THR B 21 O4 MPD B 2001 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA C 84 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 35 -71.30 -46.56 REMARK 500 ALA A 69 48.43 -144.35 REMARK 500 GLN A 81 -75.66 -51.42 REMARK 500 GLU A 82 -171.95 99.00 REMARK 500 ALA A 83 -130.85 41.12 REMARK 500 ALA A 84 81.26 67.14 REMARK 500 TYR A 85 -79.11 -67.94 REMARK 500 LEU A 144 -81.23 -82.41 REMARK 500 PHE B 35 -71.93 -45.96 REMARK 500 ALA B 69 49.18 -144.08 REMARK 500 GLU B 87 171.93 -54.85 REMARK 500 LEU B 144 -79.69 -82.62 REMARK 500 ALA C 69 49.57 -144.04 REMARK 500 GLU C 87 177.91 -57.43 REMARK 500 LEU C 144 -80.19 -82.60 REMARK 500 PHE D 35 -72.59 -45.39 REMARK 500 ALA D 69 49.68 -144.68 REMARK 500 TYR D 85 167.49 67.81 REMARK 500 LEU D 144 -81.13 -81.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 151 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 27 NE2 REMARK 620 2 HOH A 198 O 92.7 REMARK 620 3 ASP B 54 OD1 92.8 148.0 REMARK 620 4 ASP B 54 OD2 135.8 103.5 53.2 REMARK 620 5 GLU B 58 OE2 91.0 115.0 96.4 117.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 152 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 54 OD1 REMARK 620 2 ASP A 54 OD2 51.7 REMARK 620 3 GLU A 58 OE2 94.9 103.6 REMARK 620 4 HIS B 27 NE2 97.2 141.7 100.4 REMARK 620 5 HOH B2028 O 139.3 91.7 112.7 106.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE D 153 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 27 NE2 REMARK 620 2 HOH C 191 O 96.4 REMARK 620 3 ASP D 54 OD2 142.5 111.3 REMARK 620 4 ASP D 54 OD1 93.9 166.6 55.7 REMARK 620 5 GLU D 58 OE2 89.5 96.0 111.1 92.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE C 154 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 54 OD1 REMARK 620 2 ASP C 54 OD2 53.7 REMARK 620 3 GLU C 58 OE2 94.5 114.9 REMARK 620 4 HIS D 27 NE2 92.5 135.3 93.7 REMARK 620 5 HOH D 192 O 156.7 109.8 108.3 90.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE D 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE C 154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 2001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JI4 RELATED DB: PDB REMARK 900 1JI4 IS HP-NAP (NEUTROPHIL ACTIVATING PROTEIN) REMARK 900 RELATED ID: 1QGH RELATED DB: PDB REMARK 900 1QGH IS MINI-FERRITIN FROM LISTERIA INNOCUA DBREF 1JI5 A 4 145 UNP Q8RPQ2 Q8RPQ2_BACAN 4 145 DBREF 1JI5 B 4 145 UNP Q8RPQ2 Q8RPQ2_BACAN 4 145 DBREF 1JI5 C 4 145 UNP Q8RPQ2 Q8RPQ2_BACAN 4 145 DBREF 1JI5 D 4 145 UNP Q8RPQ2 Q8RPQ2_BACAN 4 145 SEQRES 1 A 142 GLN VAL ILE GLU VAL LEU ASN LYS GLN VAL ALA ASP TRP SEQRES 2 A 142 SER VAL LEU PHE THR LYS LEU HIS ASN PHE HIS TRP TYR SEQRES 3 A 142 VAL LYS GLY PRO GLN PHE PHE THR LEU HIS GLU LYS PHE SEQRES 4 A 142 GLU GLU LEU TYR THR GLU SER ALA THR HIS ILE ASP GLU SEQRES 5 A 142 ILE ALA GLU ARG ILE LEU ALA ILE GLY GLY LYS PRO VAL SEQRES 6 A 142 ALA THR MET LYS GLU TYR LEU GLU ILE SER SER ILE GLN SEQRES 7 A 142 GLU ALA ALA TYR GLY GLU THR ALA GLU GLY MET VAL GLU SEQRES 8 A 142 ALA ILE MET LYS ASP TYR GLU MET MET LEU VAL GLU LEU SEQRES 9 A 142 LYS LYS GLY MET GLU ILE ALA GLN ASN SER ASP ASP GLU SEQRES 10 A 142 MET THR SER ASP LEU LEU LEU GLY ILE TYR THR GLU LEU SEQRES 11 A 142 GLU LYS HIS ALA TRP MET LEU ARG ALA PHE LEU ASN SEQRES 1 B 142 GLN VAL ILE GLU VAL LEU ASN LYS GLN VAL ALA ASP TRP SEQRES 2 B 142 SER VAL LEU PHE THR LYS LEU HIS ASN PHE HIS TRP TYR SEQRES 3 B 142 VAL LYS GLY PRO GLN PHE PHE THR LEU HIS GLU LYS PHE SEQRES 4 B 142 GLU GLU LEU TYR THR GLU SER ALA THR HIS ILE ASP GLU SEQRES 5 B 142 ILE ALA GLU ARG ILE LEU ALA ILE GLY GLY LYS PRO VAL SEQRES 6 B 142 ALA THR MET LYS GLU TYR LEU GLU ILE SER SER ILE GLN SEQRES 7 B 142 GLU ALA ALA TYR GLY GLU THR ALA GLU GLY MET VAL GLU SEQRES 8 B 142 ALA ILE MET LYS ASP TYR GLU MET MET LEU VAL GLU LEU SEQRES 9 B 142 LYS LYS GLY MET GLU ILE ALA GLN ASN SER ASP ASP GLU SEQRES 10 B 142 MET THR SER ASP LEU LEU LEU GLY ILE TYR THR GLU LEU SEQRES 11 B 142 GLU LYS HIS ALA TRP MET LEU ARG ALA PHE LEU ASN SEQRES 1 C 142 GLN VAL ILE GLU VAL LEU ASN LYS GLN VAL ALA ASP TRP SEQRES 2 C 142 SER VAL LEU PHE THR LYS LEU HIS ASN PHE HIS TRP TYR SEQRES 3 C 142 VAL LYS GLY PRO GLN PHE PHE THR LEU HIS GLU LYS PHE SEQRES 4 C 142 GLU GLU LEU TYR THR GLU SER ALA THR HIS ILE ASP GLU SEQRES 5 C 142 ILE ALA GLU ARG ILE LEU ALA ILE GLY GLY LYS PRO VAL SEQRES 6 C 142 ALA THR MET LYS GLU TYR LEU GLU ILE SER SER ILE GLN SEQRES 7 C 142 GLU ALA ALA TYR GLY GLU THR ALA GLU GLY MET VAL GLU SEQRES 8 C 142 ALA ILE MET LYS ASP TYR GLU MET MET LEU VAL GLU LEU SEQRES 9 C 142 LYS LYS GLY MET GLU ILE ALA GLN ASN SER ASP ASP GLU SEQRES 10 C 142 MET THR SER ASP LEU LEU LEU GLY ILE TYR THR GLU LEU SEQRES 11 C 142 GLU LYS HIS ALA TRP MET LEU ARG ALA PHE LEU ASN SEQRES 1 D 142 GLN VAL ILE GLU VAL LEU ASN LYS GLN VAL ALA ASP TRP SEQRES 2 D 142 SER VAL LEU PHE THR LYS LEU HIS ASN PHE HIS TRP TYR SEQRES 3 D 142 VAL LYS GLY PRO GLN PHE PHE THR LEU HIS GLU LYS PHE SEQRES 4 D 142 GLU GLU LEU TYR THR GLU SER ALA THR HIS ILE ASP GLU SEQRES 5 D 142 ILE ALA GLU ARG ILE LEU ALA ILE GLY GLY LYS PRO VAL SEQRES 6 D 142 ALA THR MET LYS GLU TYR LEU GLU ILE SER SER ILE GLN SEQRES 7 D 142 GLU ALA ALA TYR GLY GLU THR ALA GLU GLY MET VAL GLU SEQRES 8 D 142 ALA ILE MET LYS ASP TYR GLU MET MET LEU VAL GLU LEU SEQRES 9 D 142 LYS LYS GLY MET GLU ILE ALA GLN ASN SER ASP ASP GLU SEQRES 10 D 142 MET THR SER ASP LEU LEU LEU GLY ILE TYR THR GLU LEU SEQRES 11 D 142 GLU LYS HIS ALA TRP MET LEU ARG ALA PHE LEU ASN HET FE A 152 1 HET FE B 151 1 HET MPD B2001 8 HET FE C 154 1 HET FE D 153 1 HETNAM FE FE (III) ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 5 FE 4(FE 3+) FORMUL 7 MPD C6 H14 O2 FORMUL 10 HOH *149(H2 O) HELIX 1 1 GLN A 4 VAL A 30 1 27 HELIX 2 2 GLN A 34 ILE A 63 1 30 HELIX 3 3 THR A 70 SER A 78 1 9 HELIX 4 4 THR A 88 SER A 117 1 30 HELIX 5 5 ASP A 119 ASN A 145 1 27 HELIX 6 6 GLN B 4 VAL B 30 1 27 HELIX 7 7 GLN B 34 ILE B 63 1 30 HELIX 8 8 THR B 70 SER B 78 1 9 HELIX 9 9 THR B 88 SER B 117 1 30 HELIX 10 10 ASP B 119 ASN B 145 1 27 HELIX 11 11 GLN C 4 VAL C 30 1 27 HELIX 12 12 GLN C 34 ILE C 63 1 30 HELIX 13 13 THR C 70 SER C 78 1 9 HELIX 14 14 THR C 88 SER C 117 1 30 HELIX 15 15 ASP C 119 ASN C 145 1 27 HELIX 16 16 GLN D 4 VAL D 30 1 27 HELIX 17 17 GLN D 34 ILE D 63 1 30 HELIX 18 18 THR D 70 SER D 78 1 9 HELIX 19 19 THR D 88 SER D 117 1 30 HELIX 20 20 ASP D 119 ASN D 145 1 27 LINK NE2 HIS A 27 FE FE B 151 1555 1555 2.05 LINK OD1 ASP A 54 FE FE A 152 1555 1555 2.73 LINK OD2 ASP A 54 FE FE A 152 1555 1555 2.14 LINK OE2 GLU A 58 FE FE A 152 1555 1555 2.45 LINK FE FE A 152 NE2 HIS B 27 1555 1555 1.88 LINK FE FE A 152 O HOH B2028 1555 1555 2.19 LINK O HOH A 198 FE FE B 151 1555 1555 2.05 LINK OD1 ASP B 54 FE FE B 151 1555 1555 2.72 LINK OD2 ASP B 54 FE FE B 151 1555 1555 1.99 LINK OE2 GLU B 58 FE FE B 151 1555 1555 2.42 LINK NE2 HIS C 27 FE FE D 153 1555 1555 2.05 LINK OD1 ASP C 54 FE FE C 154 1555 1555 2.69 LINK OD2 ASP C 54 FE FE C 154 1555 1555 1.95 LINK OE2 GLU C 58 FE FE C 154 1555 1555 2.39 LINK FE FE C 154 NE2 HIS D 27 1555 1555 2.05 LINK FE FE C 154 O HOH D 192 1555 1555 1.84 LINK O HOH C 191 FE FE D 153 1555 1555 1.71 LINK OD2 ASP D 54 FE FE D 153 1555 1555 1.88 LINK OD1 ASP D 54 FE FE D 153 1555 1555 2.59 LINK OE2 GLU D 58 FE FE D 153 1555 1555 2.51 SITE 1 AC1 4 HIS A 27 HOH A 198 ASP B 54 GLU B 58 SITE 1 AC2 4 ASP A 54 GLU A 58 HIS B 27 HOH B2028 SITE 1 AC3 4 HIS C 27 HOH C 191 ASP D 54 GLU D 58 SITE 1 AC4 4 ASP C 54 GLU C 58 HIS D 27 HOH D 192 SITE 1 AC5 11 SER A 17 PHE A 20 THR A 21 ILE A 53 SITE 2 AC5 11 MET A 71 HOH A 157 HOH A 167 SER B 17 SITE 3 AC5 11 PHE B 20 THR B 21 MET B 71 CRYST1 89.224 89.224 210.165 90.00 90.00 120.00 H 3 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011208 0.006471 0.000000 0.00000 SCALE2 0.000000 0.012942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004758 0.00000