HEADER STRUCTURAL PROTEIN 16-JUL-01 1JLJ TITLE 1.6 ANGSTROM CRYSTAL STRUCTURE OF THE HUMAN NEURORECEPTOR ANCHORING TITLE 2 AND MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN GEPHYRIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GEPHYRIN; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: RESIDUES 1-181; COMPND 5 SYNONYM: PUTATIVE GLYCINE RECEPTOR-TUBULIN LINKER PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GEPHYRIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DL41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE60 KEYWDS GLOBULAR ALPHA/BETA FOLD, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.SCHWARZ,N.SCHRADER,R.R.MENDEL,H.-J.HECHT,H.SCHINDELIN REVDAT 4 16-AUG-23 1JLJ 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1JLJ 1 VERSN REVDAT 2 01-APR-03 1JLJ 1 JRNL REVDAT 1 21-SEP-01 1JLJ 0 JRNL AUTH G.SCHWARZ,N.SCHRADER,R.R.MENDEL,H.J.HECHT,H.SCHINDELIN JRNL TITL CRYSTAL STRUCTURES OF HUMAN GEPHYRIN AND PLANT CNX1 G JRNL TITL 2 DOMAINS: COMPARATIVE ANALYSIS AND FUNCTIONAL IMPLICATIONS. JRNL REF J.MOL.BIOL. V. 312 405 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11554796 JRNL DOI 10.1006/JMBI.2001.4952 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 3 NUMBER OF REFLECTIONS : 62069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2623 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3861 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.48000 REMARK 3 B22 (A**2) : -0.36000 REMARK 3 B33 (A**2) : 0.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.013 ; 0.022 REMARK 3 ANGLE DISTANCE (A) : 1.399 ; 1.994 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.003 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.286 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.845 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 8.113 ; 4.500 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 SCALING DETAILS: BABINET'S PRINCIPLE FOR SCALING HAS BEEN USED. REMARK 3 BULK SOLVENT CORRECTION BASED ON CONSTANT VALUE HAS BEEN USED. REMARK 3 PARAMETERS FOR MASK CALCULATION. VDW PROB RADII = 1.40, ION PROBE REMARK 3 RADII = 0.80, SHRINKAGE RADII = 0.80 REMARK 4 REMARK 4 1JLJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-01. REMARK 100 THE DEPOSITION ID IS D_1000013910. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-00; 27-NOV-00 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X26C; X26C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.100; 1.100 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL MONOCHROMATOR; REMARK 200 DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64743 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 46.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.28300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1DI6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE, AMMONIUM, ACETATE, PH REMARK 280 4.6, VAPOR DIFFUSION, HANGING DROP AT 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.13450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.00400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.13450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.00400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CONTENT OF THE ASSYMETRIC UNIT CORRESPONDS TO THE REMARK 300 BIOLOGICAL ACTIVE FORM OF THE TRIMERIC GEPHYRIN G DOMAIN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1243 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 GLU A 4 REMARK 465 GLY A 5 REMARK 465 MET A 6 REMARK 465 ILE A 7 REMARK 465 LEU A 8 REMARK 465 THR A 9 REMARK 465 ASN A 10 REMARK 465 HIS A 11 REMARK 465 ASP A 12 REMARK 465 ARG A 182 REMARK 465 SER A 183 REMARK 465 HIS A 184 REMARK 465 HIS A 185 REMARK 465 HIS A 186 REMARK 465 HIS A 187 REMARK 465 HIS A 188 REMARK 465 HIS A 189 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 GLU B 4 REMARK 465 GLY B 5 REMARK 465 MET B 6 REMARK 465 ILE B 7 REMARK 465 LEU B 8 REMARK 465 THR B 9 REMARK 465 ASN B 10 REMARK 465 HIS B 11 REMARK 465 ASP B 12 REMARK 465 ARG B 182 REMARK 465 SER B 183 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 THR C 3 REMARK 465 GLU C 4 REMARK 465 GLY C 5 REMARK 465 MET C 6 REMARK 465 ILE C 7 REMARK 465 LEU C 8 REMARK 465 THR C 9 REMARK 465 ASN C 10 REMARK 465 HIS C 11 REMARK 465 ASP C 12 REMARK 465 ARG C 182 REMARK 465 SER C 183 REMARK 465 HIS C 184 REMARK 465 HIS C 185 REMARK 465 HIS C 186 REMARK 465 HIS C 187 REMARK 465 HIS C 188 REMARK 465 HIS C 189 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 1030 O HOH C 1265 2.02 REMARK 500 NE2 GLN C 44 O HOH C 1027 2.06 REMARK 500 O HOH A 1116 O HOH A 1222 2.08 REMARK 500 O HOH C 1067 O HOH C 1142 2.09 REMARK 500 O HOH C 1163 O HOH C 1273 2.11 REMARK 500 O HOH B 254 O HOH C 1138 2.14 REMARK 500 ND2 ASN A 29 O HOH A 1152 2.15 REMARK 500 O HOH B 329 O HOH B 366 2.15 REMARK 500 O HOH B 377 O HOH B 399 2.18 REMARK 500 O HOH B 337 O HOH B 394 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 277 O HOH B 348 2656 2.08 REMARK 500 O HOH A 1178 O HOH C 1109 4545 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 61 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 41 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 61 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP C 61 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 14 140.00 -39.97 REMARK 500 SER A 23 116.97 -164.04 REMARK 500 LEU A 48 -106.75 -110.29 REMARK 500 SER B 23 116.69 -162.03 REMARK 500 LEU B 48 -85.44 -109.01 REMARK 500 GLN C 14 154.66 -24.93 REMARK 500 SER C 23 115.59 -161.74 REMARK 500 LEU C 48 -100.48 -104.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1002 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1033 O REMARK 620 2 HOH A1109 O 75.9 REMARK 620 3 HOH B 349 O 115.0 69.4 REMARK 620 4 HOH C1065 O 91.2 120.5 64.6 REMARK 620 5 HOH C1072 O 146.7 83.4 80.5 121.9 REMARK 620 6 HOH C1085 O 97.5 139.9 142.8 98.8 81.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DI6 RELATED DB: PDB REMARK 900 1.45 A CRYSTAL STRUCTURE OF THE MOLYBDENUMM COFACTOR BIOSYNTHESIS REMARK 900 PROTEIN MOGA FROM ESCHERICHIA COLI REMARK 900 RELATED ID: 1DI7 RELATED DB: PDB REMARK 900 1.60 ANGSTROM CRYSTAL STRUCTURE OF THE MOLYBDENUM COFACTOR REMARK 900 BIOSYNTHESIS PROTEIN MOGA FROM ESCHERICHIA COLI REMARK 900 RELATED ID: 1IHC RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF GEPHYRIN N-TERMINAL DOMAIN REMARK 900 RELATED ID: 1G8R RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF ESCHERICHIA COLI MOEA AND ITS RELATIONSHIP REMARK 900 TO THE MULTIFUNCTINAL PROTEIN GEPHYRIN DBREF 1JLJ A 1 181 UNP Q9NQX3 GEPH_HUMAN 1 181 DBREF 1JLJ B 1 181 UNP Q9NQX3 GEPH_HUMAN 1 181 DBREF 1JLJ C 1 181 UNP Q9NQX3 GEPH_HUMAN 1 181 SEQADV 1JLJ ARG A 182 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ SER A 183 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS A 184 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS A 185 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS A 186 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS A 187 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS A 188 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS A 189 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ ARG B 182 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ SER B 183 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS B 184 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS B 185 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS B 186 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS B 187 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS B 188 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS B 189 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ ARG C 182 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ SER C 183 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS C 184 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS C 185 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS C 186 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS C 187 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS C 188 UNP Q9NQX3 EXPRESSION TAG SEQADV 1JLJ HIS C 189 UNP Q9NQX3 EXPRESSION TAG SEQRES 1 A 189 MET ALA THR GLU GLY MET ILE LEU THR ASN HIS ASP HIS SEQRES 2 A 189 GLN ILE ARG VAL GLY VAL LEU THR VAL SER ASP SER CYS SEQRES 3 A 189 PHE ARG ASN LEU ALA GLU ASP ARG SER GLY ILE ASN LEU SEQRES 4 A 189 LYS ASP LEU VAL GLN ASP PRO SER LEU LEU GLY GLY THR SEQRES 5 A 189 ILE SER ALA TYR LYS ILE VAL PRO ASP GLU ILE GLU GLU SEQRES 6 A 189 ILE LYS GLU THR LEU ILE ASP TRP CYS ASP GLU LYS GLU SEQRES 7 A 189 LEU ASN LEU ILE LEU THR THR GLY GLY THR GLY PHE ALA SEQRES 8 A 189 PRO ARG ASP VAL THR PRO GLU ALA THR LYS GLU VAL ILE SEQRES 9 A 189 GLU ARG GLU ALA PRO GLY MET ALA LEU ALA MET LEU MET SEQRES 10 A 189 GLY SER LEU ASN VAL THR PRO LEU GLY MET LEU SER ARG SEQRES 11 A 189 PRO VAL CYS GLY ILE ARG GLY LYS THR LEU ILE ILE ASN SEQRES 12 A 189 LEU PRO GLY SER LYS LYS GLY SER GLN GLU CYS PHE GLN SEQRES 13 A 189 PHE ILE LEU PRO ALA LEU PRO HIS ALA ILE ASP LEU LEU SEQRES 14 A 189 ARG ASP ALA ILE VAL LYS VAL LYS GLU VAL HIS ASP ARG SEQRES 15 A 189 SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 189 MET ALA THR GLU GLY MET ILE LEU THR ASN HIS ASP HIS SEQRES 2 B 189 GLN ILE ARG VAL GLY VAL LEU THR VAL SER ASP SER CYS SEQRES 3 B 189 PHE ARG ASN LEU ALA GLU ASP ARG SER GLY ILE ASN LEU SEQRES 4 B 189 LYS ASP LEU VAL GLN ASP PRO SER LEU LEU GLY GLY THR SEQRES 5 B 189 ILE SER ALA TYR LYS ILE VAL PRO ASP GLU ILE GLU GLU SEQRES 6 B 189 ILE LYS GLU THR LEU ILE ASP TRP CYS ASP GLU LYS GLU SEQRES 7 B 189 LEU ASN LEU ILE LEU THR THR GLY GLY THR GLY PHE ALA SEQRES 8 B 189 PRO ARG ASP VAL THR PRO GLU ALA THR LYS GLU VAL ILE SEQRES 9 B 189 GLU ARG GLU ALA PRO GLY MET ALA LEU ALA MET LEU MET SEQRES 10 B 189 GLY SER LEU ASN VAL THR PRO LEU GLY MET LEU SER ARG SEQRES 11 B 189 PRO VAL CYS GLY ILE ARG GLY LYS THR LEU ILE ILE ASN SEQRES 12 B 189 LEU PRO GLY SER LYS LYS GLY SER GLN GLU CYS PHE GLN SEQRES 13 B 189 PHE ILE LEU PRO ALA LEU PRO HIS ALA ILE ASP LEU LEU SEQRES 14 B 189 ARG ASP ALA ILE VAL LYS VAL LYS GLU VAL HIS ASP ARG SEQRES 15 B 189 SER HIS HIS HIS HIS HIS HIS SEQRES 1 C 189 MET ALA THR GLU GLY MET ILE LEU THR ASN HIS ASP HIS SEQRES 2 C 189 GLN ILE ARG VAL GLY VAL LEU THR VAL SER ASP SER CYS SEQRES 3 C 189 PHE ARG ASN LEU ALA GLU ASP ARG SER GLY ILE ASN LEU SEQRES 4 C 189 LYS ASP LEU VAL GLN ASP PRO SER LEU LEU GLY GLY THR SEQRES 5 C 189 ILE SER ALA TYR LYS ILE VAL PRO ASP GLU ILE GLU GLU SEQRES 6 C 189 ILE LYS GLU THR LEU ILE ASP TRP CYS ASP GLU LYS GLU SEQRES 7 C 189 LEU ASN LEU ILE LEU THR THR GLY GLY THR GLY PHE ALA SEQRES 8 C 189 PRO ARG ASP VAL THR PRO GLU ALA THR LYS GLU VAL ILE SEQRES 9 C 189 GLU ARG GLU ALA PRO GLY MET ALA LEU ALA MET LEU MET SEQRES 10 C 189 GLY SER LEU ASN VAL THR PRO LEU GLY MET LEU SER ARG SEQRES 11 C 189 PRO VAL CYS GLY ILE ARG GLY LYS THR LEU ILE ILE ASN SEQRES 12 C 189 LEU PRO GLY SER LYS LYS GLY SER GLN GLU CYS PHE GLN SEQRES 13 C 189 PHE ILE LEU PRO ALA LEU PRO HIS ALA ILE ASP LEU LEU SEQRES 14 C 189 ARG ASP ALA ILE VAL LYS VAL LYS GLU VAL HIS ASP ARG SEQRES 15 C 189 SER HIS HIS HIS HIS HIS HIS HET NA A1002 1 HET FMT C1001 3 HETNAM NA SODIUM ION HETNAM FMT FORMIC ACID FORMUL 4 NA NA 1+ FORMUL 5 FMT C H2 O2 FORMUL 6 HOH *770(H2 O) HELIX 1 1 SER A 23 ARG A 28 1 6 HELIX 2 2 ASP A 33 ASP A 45 1 13 HELIX 3 3 GLU A 62 GLU A 76 1 15 HELIX 4 4 VAL A 95 ILE A 104 1 10 HELIX 5 5 ALA A 108 THR A 123 1 16 HELIX 6 6 PRO A 124 SER A 129 5 6 HELIX 7 7 SER A 147 LEU A 159 1 13 HELIX 8 8 ALA A 161 ARG A 170 1 10 HELIX 9 9 VAL A 174 VAL A 179 1 6 HELIX 10 10 SER B 23 ARG B 28 1 6 HELIX 11 11 ASP B 33 ASP B 45 1 13 HELIX 12 12 GLU B 62 GLU B 76 1 15 HELIX 13 13 VAL B 95 ILE B 104 1 10 HELIX 14 14 ALA B 108 THR B 123 1 16 HELIX 15 15 PRO B 124 SER B 129 5 6 HELIX 16 16 SER B 147 LEU B 159 1 13 HELIX 17 17 ALA B 161 ARG B 170 1 10 HELIX 18 18 VAL B 174 VAL B 179 1 6 HELIX 19 19 SER C 23 ARG C 28 1 6 HELIX 20 20 ASP C 33 ASP C 45 1 13 HELIX 21 21 GLU C 62 GLU C 76 1 15 HELIX 22 22 VAL C 95 ILE C 104 1 10 HELIX 23 23 ALA C 108 THR C 123 1 16 HELIX 24 24 PRO C 124 SER C 129 5 6 HELIX 25 25 SER C 147 LEU C 159 1 13 HELIX 26 26 ALA C 161 ARG C 170 1 10 HELIX 27 27 VAL C 174 VAL C 179 1 6 SHEET 1 A 6 THR A 52 VAL A 59 0 SHEET 2 A 6 ARG A 16 VAL A 22 1 N VAL A 17 O THR A 52 SHEET 3 A 6 LEU A 81 THR A 85 1 O LEU A 81 N GLY A 18 SHEET 4 A 6 THR A 139 LEU A 144 1 O LEU A 140 N ILE A 82 SHEET 5 A 6 CYS A 133 ARG A 136 -1 O GLY A 134 N ILE A 141 SHEET 6 A 6 ARG A 106 GLU A 107 -1 O ARG A 106 N ILE A 135 SHEET 1 B 6 THR B 52 VAL B 59 0 SHEET 2 B 6 ARG B 16 VAL B 22 1 N VAL B 17 O THR B 52 SHEET 3 B 6 LEU B 81 THR B 85 1 O LEU B 81 N GLY B 18 SHEET 4 B 6 THR B 139 LEU B 144 1 O LEU B 140 N ILE B 82 SHEET 5 B 6 CYS B 133 ARG B 136 -1 O GLY B 134 N ILE B 141 SHEET 6 B 6 ARG B 106 GLU B 107 -1 O ARG B 106 N ILE B 135 SHEET 1 C 6 THR C 52 VAL C 59 0 SHEET 2 C 6 ARG C 16 VAL C 22 1 N VAL C 17 O THR C 52 SHEET 3 C 6 LEU C 81 THR C 85 1 O LEU C 81 N GLY C 18 SHEET 4 C 6 THR C 139 LEU C 144 1 O LEU C 140 N ILE C 82 SHEET 5 C 6 CYS C 133 ARG C 136 -1 O GLY C 134 N ILE C 141 SHEET 6 C 6 ARG C 106 GLU C 107 -1 O ARG C 106 N ILE C 135 LINK NA NA A1002 O HOH A1033 1555 1555 2.59 LINK NA NA A1002 O HOH A1109 1555 1555 2.45 LINK NA NA A1002 O HOH B 349 1555 1555 2.51 LINK NA NA A1002 O HOH C1065 1555 1555 2.60 LINK NA NA A1002 O HOH C1072 1555 1555 2.26 LINK NA NA A1002 O HOH C1085 1555 1555 2.46 SITE 1 AC1 6 HOH A1033 HOH A1109 HOH B 349 HOH C1065 SITE 2 AC1 6 HOH C1072 HOH C1085 SITE 1 AC2 4 HOH B 200 PRO C 109 HOH C1065 HOH C1120 CRYST1 114.269 66.008 73.122 90.00 93.27 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008751 0.000000 0.000500 0.00000 SCALE2 0.000000 0.015150 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013698 0.00000