HEADER TRANSFERASE 01-AUG-01 1JPA TITLE CRYSTAL STRUCTURE OF UNPHOSPHORYLATED EPHB2 RECEPTOR TYROSINE KINASE TITLE 2 AND JUXTAMEMBRANE REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURAL KINASE, NUK=EPH/ELK/ECK FAMILY RECEPTOR-LIKE COMPND 3 TYROSINE KINASE; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: PARTIAL JUXTAMEMBRANE, ENTIRE KINASE DOMAIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX KEYWDS RECEPTOR TYROSINE KINASE, AUTOINHIBITED, UNPHOSPHORYLATED, KEYWDS 2 JUXTAMEMBRANE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.E.WYBENGA-GROOT,T.PAWSON,F.SICHERI REVDAT 5 03-APR-24 1JPA 1 REMARK REVDAT 4 07-FEB-24 1JPA 1 REMARK REVDAT 3 27-OCT-21 1JPA 1 REMARK SEQADV REVDAT 2 24-FEB-09 1JPA 1 VERSN REVDAT 1 03-OCT-01 1JPA 0 JRNL AUTH L.E.WYBENGA-GROOT,B.BASKIN,S.H.ONG,J.TONG,T.PAWSON,F.SICHERI JRNL TITL STRUCTURAL BASIS FOR AUTOINHIBITION OF THE EPHB2 RECEPTOR JRNL TITL 2 TYROSINE KINASE BY THE UNPHOSPHORYLATED JUXTAMEMBRANE JRNL TITL 3 REGION. JRNL REF CELL(CAMBRIDGE,MASS.) V. 106 745 2001 JRNL REFN ISSN 0092-8674 JRNL PMID 11572780 JRNL DOI 10.1016/S0092-8674(01)00496-2 REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 39931 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4050 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4361 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.12 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.16 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.090 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.730 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JPA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-AUG-01. REMARK 100 THE DEPOSITION ID IS D_1000014028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-00; 21-SEP-00 REMARK 200 TEMPERATURE (KELVIN) : NULL; NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 14-BM-D; 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790, 0.9788, 0.9770; 1.00 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: APO-FORM FROM MAD DATA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, MAGNESIUM CHLORIDE, PEG 4000, REMARK 280 ISOPROPANOL, ETHYLENE GLYCOL, PH 7.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 301K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 595 REMARK 465 HIS A 596 REMARK 465 MET A 597 REMARK 465 THR A 598 REMARK 465 PRO A 599 REMARK 465 GLY A 600 REMARK 465 MET A 601 REMARK 465 PRO A 651 REMARK 465 GLY A 652 REMARK 465 LYS A 653 REMARK 465 GLY A 774 REMARK 465 LEU A 775 REMARK 465 SER A 776 REMARK 465 ARG A 777 REMARK 465 PHE A 778 REMARK 465 LEU A 779 REMARK 465 GLU A 780 REMARK 465 ASP A 781 REMARK 465 ASP A 782 REMARK 465 THR A 783 REMARK 465 SER A 784 REMARK 465 ASP A 785 REMARK 465 PRO A 786 REMARK 465 THR A 787 REMARK 465 TYR A 788 REMARK 465 THR A 789 REMARK 465 SER A 790 REMARK 465 ALA A 791 REMARK 465 LEU A 792 REMARK 465 GLY A 793 REMARK 465 GLY A 794 REMARK 465 LYS A 795 REMARK 465 ILE A 796 REMARK 465 MET A 901 REMARK 465 ALA A 902 REMARK 465 PRO A 903 REMARK 465 LEU A 904 REMARK 465 SER A 905 REMARK 465 SER A 906 REMARK 465 GLY B 595 REMARK 465 HIS B 596 REMARK 465 MET B 597 REMARK 465 THR B 598 REMARK 465 PRO B 599 REMARK 465 GLY B 600 REMARK 465 MET B 601 REMARK 465 LEU B 650 REMARK 465 PRO B 651 REMARK 465 GLY B 652 REMARK 465 LYS B 653 REMARK 465 THR B 701 REMARK 465 GLY B 774 REMARK 465 LEU B 775 REMARK 465 SER B 776 REMARK 465 ARG B 777 REMARK 465 PHE B 778 REMARK 465 LEU B 779 REMARK 465 GLU B 780 REMARK 465 ASP B 781 REMARK 465 ASP B 782 REMARK 465 THR B 783 REMARK 465 SER B 784 REMARK 465 ASP B 785 REMARK 465 PRO B 786 REMARK 465 THR B 787 REMARK 465 TYR B 788 REMARK 465 THR B 789 REMARK 465 SER B 790 REMARK 465 ALA B 791 REMARK 465 LEU B 792 REMARK 465 GLY B 793 REMARK 465 GLY B 794 REMARK 465 LYS B 795 REMARK 465 ILE B 796 REMARK 465 GLN B 841 REMARK 465 ALA B 900 REMARK 465 MET B 901 REMARK 465 ALA B 902 REMARK 465 PRO B 903 REMARK 465 LEU B 904 REMARK 465 SER B 905 REMARK 465 SER B 906 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 611 CG CD OE1 OE2 REMARK 480 ARG A 618 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 630 CG CD CE NZ REMARK 480 GLU A 632 CG CD OE1 OE2 REMARK 480 GLN A 633 CG CD OE1 NE2 REMARK 480 ILE A 635 CG1 CG2 CD1 REMARK 480 LYS A 649 CG CD CE NZ REMARK 480 ARG A 654 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 664 CG CD CE NZ REMARK 480 GLU A 669 CG CD OE1 OE2 REMARK 480 ARG A 809 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 837 CG OD1 OD2 REMARK 480 THR A 839 OG1 CG2 REMARK 480 GLU A 848 CG CD OE1 OE2 REMARK 480 GLN A 849 CG CD OE1 NE2 REMARK 480 MET A 857 SD CE REMARK 480 ASP A 858 CG OD1 OD2 REMARK 480 LYS A 873 CD CE NZ REMARK 480 LYS A 890 CG CD CE NZ REMARK 480 ARG A 893 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 618 CG CD NE CZ NH1 NH2 REMARK 480 ILE B 626 CG1 CG2 CD1 REMARK 480 LYS B 630 CG CD CE NZ REMARK 480 GLU B 632 CG CD OE1 OE2 REMARK 480 GLU B 642 CG CD OE1 OE2 REMARK 480 LYS B 649 CG CD CE NZ REMARK 480 ARG B 654 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 664 CG CD CE NZ REMARK 480 GLU B 669 CG CD OE1 OE2 REMARK 480 PRO B 797 N CA CB CG CD REMARK 480 GLN B 807 CG CD OE1 NE2 REMARK 480 ARG B 809 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 810 CD CE NZ REMARK 480 ASP B 837 CG OD1 OD2 REMARK 480 THR B 839 CB OG1 CG2 REMARK 480 ASN B 845 CG OD1 ND2 REMARK 480 GLU B 848 CG CD OE1 OE2 REMARK 480 GLN B 849 CG CD OE1 NE2 REMARK 480 ASP B 858 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 632 -62.18 -95.05 REMARK 500 ILE A 635 -70.57 -80.18 REMARK 500 ARG A 753 -18.41 76.65 REMARK 500 TRP A 836 -126.86 46.95 REMARK 500 GLU B 632 -67.48 -96.20 REMARK 500 LYS B 664 -103.01 -15.43 REMARK 500 SER B 665 147.50 175.26 REMARK 500 ARG B 753 -16.62 78.02 REMARK 500 SER B 771 -158.93 -133.42 REMARK 500 ASP B 772 61.18 64.89 REMARK 500 TRP B 836 -131.14 48.22 REMARK 500 TRP B 871 35.82 -96.84 REMARK 500 ASN B 894 78.54 -118.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 ONLY THE ADENINE RING OF ANP (AMP-PNP), REMARK 600 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, REMARK 600 WAS SEEN IN THE DENSITY. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ANP A 400 REMARK 610 ANP B 401 REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 HOH B 213 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP B 401 DBREF 1JPA A 595 906 UNP P54763 EPHB2_MOUSE 595 906 DBREF 1JPA B 595 906 UNP P54763 EPHB2_MOUSE 595 906 SEQADV 1JPA PHE A 604 UNP P54763 TYR 604 ENGINEERED MUTATION SEQADV 1JPA PHE A 610 UNP P54763 TYR 610 ENGINEERED MUTATION SEQADV 1JPA PHE B 604 UNP P54763 TYR 604 ENGINEERED MUTATION SEQADV 1JPA PHE B 610 UNP P54763 TYR 610 ENGINEERED MUTATION SEQRES 1 A 312 GLY HIS MET THR PRO GLY MET LYS ILE PHE ILE ASP PRO SEQRES 2 A 312 PHE THR PHE GLU ASP PRO ASN GLU ALA VAL ARG GLU PHE SEQRES 3 A 312 ALA LYS GLU ILE ASP ILE SER CYS VAL LYS ILE GLU GLN SEQRES 4 A 312 VAL ILE GLY ALA GLY GLU PHE GLY GLU VAL CYS SER GLY SEQRES 5 A 312 HIS LEU LYS LEU PRO GLY LYS ARG GLU ILE PHE VAL ALA SEQRES 6 A 312 ILE LYS THR LEU LYS SER GLY TYR THR GLU LYS GLN ARG SEQRES 7 A 312 ARG ASP PHE LEU SER GLU ALA SER ILE MET GLY GLN PHE SEQRES 8 A 312 ASP HIS PRO ASN VAL ILE HIS LEU GLU GLY VAL VAL THR SEQRES 9 A 312 LYS SER THR PRO VAL MET ILE ILE THR GLU PHE MET GLU SEQRES 10 A 312 ASN GLY SER LEU ASP SER PHE LEU ARG GLN ASN ASP GLY SEQRES 11 A 312 GLN PHE THR VAL ILE GLN LEU VAL GLY MET LEU ARG GLY SEQRES 12 A 312 ILE ALA ALA GLY MET LYS TYR LEU ALA ASP MET ASN TYR SEQRES 13 A 312 VAL HIS ARG ASP LEU ALA ALA ARG ASN ILE LEU VAL ASN SEQRES 14 A 312 SER ASN LEU VAL CYS LYS VAL SER ASP PHE GLY LEU SER SEQRES 15 A 312 ARG PHE LEU GLU ASP ASP THR SER ASP PRO THR TYR THR SEQRES 16 A 312 SER ALA LEU GLY GLY LYS ILE PRO ILE ARG TRP THR ALA SEQRES 17 A 312 PRO GLU ALA ILE GLN TYR ARG LYS PHE THR SER ALA SER SEQRES 18 A 312 ASP VAL TRP SER TYR GLY ILE VAL MET TRP GLU VAL MET SEQRES 19 A 312 SER TYR GLY GLU ARG PRO TYR TRP ASP MET THR ASN GLN SEQRES 20 A 312 ASP VAL ILE ASN ALA ILE GLU GLN ASP TYR ARG LEU PRO SEQRES 21 A 312 PRO PRO MET ASP CYS PRO SER ALA LEU HIS GLN LEU MET SEQRES 22 A 312 LEU ASP CYS TRP GLN LYS ASP ARG ASN HIS ARG PRO LYS SEQRES 23 A 312 PHE GLY GLN ILE VAL ASN THR LEU ASP LYS MET ILE ARG SEQRES 24 A 312 ASN PRO ASN SER LEU LYS ALA MET ALA PRO LEU SER SER SEQRES 1 B 312 GLY HIS MET THR PRO GLY MET LYS ILE PHE ILE ASP PRO SEQRES 2 B 312 PHE THR PHE GLU ASP PRO ASN GLU ALA VAL ARG GLU PHE SEQRES 3 B 312 ALA LYS GLU ILE ASP ILE SER CYS VAL LYS ILE GLU GLN SEQRES 4 B 312 VAL ILE GLY ALA GLY GLU PHE GLY GLU VAL CYS SER GLY SEQRES 5 B 312 HIS LEU LYS LEU PRO GLY LYS ARG GLU ILE PHE VAL ALA SEQRES 6 B 312 ILE LYS THR LEU LYS SER GLY TYR THR GLU LYS GLN ARG SEQRES 7 B 312 ARG ASP PHE LEU SER GLU ALA SER ILE MET GLY GLN PHE SEQRES 8 B 312 ASP HIS PRO ASN VAL ILE HIS LEU GLU GLY VAL VAL THR SEQRES 9 B 312 LYS SER THR PRO VAL MET ILE ILE THR GLU PHE MET GLU SEQRES 10 B 312 ASN GLY SER LEU ASP SER PHE LEU ARG GLN ASN ASP GLY SEQRES 11 B 312 GLN PHE THR VAL ILE GLN LEU VAL GLY MET LEU ARG GLY SEQRES 12 B 312 ILE ALA ALA GLY MET LYS TYR LEU ALA ASP MET ASN TYR SEQRES 13 B 312 VAL HIS ARG ASP LEU ALA ALA ARG ASN ILE LEU VAL ASN SEQRES 14 B 312 SER ASN LEU VAL CYS LYS VAL SER ASP PHE GLY LEU SER SEQRES 15 B 312 ARG PHE LEU GLU ASP ASP THR SER ASP PRO THR TYR THR SEQRES 16 B 312 SER ALA LEU GLY GLY LYS ILE PRO ILE ARG TRP THR ALA SEQRES 17 B 312 PRO GLU ALA ILE GLN TYR ARG LYS PHE THR SER ALA SER SEQRES 18 B 312 ASP VAL TRP SER TYR GLY ILE VAL MET TRP GLU VAL MET SEQRES 19 B 312 SER TYR GLY GLU ARG PRO TYR TRP ASP MET THR ASN GLN SEQRES 20 B 312 ASP VAL ILE ASN ALA ILE GLU GLN ASP TYR ARG LEU PRO SEQRES 21 B 312 PRO PRO MET ASP CYS PRO SER ALA LEU HIS GLN LEU MET SEQRES 22 B 312 LEU ASP CYS TRP GLN LYS ASP ARG ASN HIS ARG PRO LYS SEQRES 23 B 312 PHE GLY GLN ILE VAL ASN THR LEU ASP LYS MET ILE ARG SEQRES 24 B 312 ASN PRO ASN SER LEU LYS ALA MET ALA PRO LEU SER SER HET ANP A 400 10 HET ANP B 401 10 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 3 ANP 2(C10 H17 N6 O12 P3) FORMUL 5 HOH *260(H2 O) HELIX 1 1 ASP A 606 PHE A 610 5 5 HELIX 2 2 ASP A 612 ALA A 621 1 10 HELIX 3 3 ASP A 625 SER A 627 5 3 HELIX 4 4 THR A 668 GLY A 683 1 16 HELIX 5 5 LEU A 715 GLN A 721 1 7 HELIX 6 6 THR A 727 MET A 748 1 22 HELIX 7 7 ALA A 756 ARG A 758 5 3 HELIX 8 8 PRO A 797 THR A 801 5 5 HELIX 9 9 ALA A 802 TYR A 808 1 7 HELIX 10 10 THR A 812 SER A 829 1 18 HELIX 11 11 THR A 839 GLN A 849 1 11 HELIX 12 12 PRO A 860 TRP A 871 1 12 HELIX 13 13 LYS A 880 ASN A 894 1 15 HELIX 14 14 PRO A 895 LYS A 899 5 5 HELIX 15 15 ASP B 606 PHE B 610 5 5 HELIX 16 16 ASP B 612 ALA B 621 1 10 HELIX 17 17 ASP B 625 SER B 627 5 3 HELIX 18 18 THR B 668 GLY B 683 1 16 HELIX 19 19 SER B 714 GLN B 721 1 8 HELIX 20 20 THR B 727 MET B 748 1 22 HELIX 21 21 ALA B 756 ARG B 758 5 3 HELIX 22 22 PRO B 797 THR B 801 5 5 HELIX 23 23 ALA B 802 TYR B 808 1 7 HELIX 24 24 THR B 812 SER B 829 1 18 HELIX 25 25 ASP B 842 GLN B 849 1 8 HELIX 26 26 PRO B 860 TRP B 871 1 12 HELIX 27 27 ASP B 874 ARG B 878 5 5 HELIX 28 28 LYS B 880 ASN B 894 1 15 HELIX 29 29 PRO B 895 LYS B 899 5 5 SHEET 1 A 5 VAL A 629 ALA A 637 0 SHEET 2 A 5 GLU A 642 LEU A 648 -1 N VAL A 643 O GLY A 636 SHEET 3 A 5 ILE A 656 THR A 662 -1 O ILE A 656 N LEU A 648 SHEET 4 A 5 MET A 704 GLU A 708 -1 O ILE A 705 N LYS A 661 SHEET 5 A 5 LEU A 693 VAL A 697 -1 N GLU A 694 O ILE A 706 SHEET 1 B 3 GLY A 713 SER A 714 0 SHEET 2 B 3 ILE A 760 VAL A 762 -1 N VAL A 762 O GLY A 713 SHEET 3 B 3 CYS A 768 VAL A 770 -1 N LYS A 769 O LEU A 761 SHEET 1 C 5 VAL B 629 ALA B 637 0 SHEET 2 C 5 GLU B 642 LEU B 648 -1 O VAL B 643 N ILE B 635 SHEET 3 C 5 ILE B 656 THR B 662 -1 N ILE B 656 O LEU B 648 SHEET 4 C 5 MET B 704 GLU B 708 -1 O ILE B 705 N LYS B 661 SHEET 5 C 5 LEU B 693 VAL B 697 -1 N GLU B 694 O ILE B 706 SHEET 1 D 2 ILE B 760 VAL B 762 0 SHEET 2 D 2 CYS B 768 VAL B 770 -1 O LYS B 769 N LEU B 761 CISPEP 1 THR A 701 PRO A 702 0 -0.80 SITE 1 AC1 4 ALA A 659 GLU A 708 MET A 710 LEU A 761 SITE 1 AC2 6 HOH B 250 ALA B 659 THR B 707 GLU B 708 SITE 2 AC2 6 MET B 710 LEU B 761 CRYST1 47.052 57.616 67.742 112.95 103.17 91.58 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021253 0.000586 0.005706 0.00000 SCALE2 0.000000 0.017363 0.007738 0.00000 SCALE3 0.000000 0.000000 0.016598 0.00000