HEADER VIRAL PROTEIN 03-AUG-01 1JPX TITLE MUTATION THAT DESTABILIZE THE GP41 CORE: DETERMINANTS FOR STABILIZING TITLE 2 THE SIV/CPMAC ENVELOPE GLYCOPROTEIN COMPLEX. WILD TYPE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GP41 ENVELOPE PROTEIN; COMPND 3 CHAIN: A, D, G; COMPND 4 FRAGMENT: N40(L6)C38; COMPND 5 SYNONYM: ENVELOPE GLYCOPROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN IMMUNODEFICIENCY VIRUS; SOURCE 3 ORGANISM_TAXID: 11723; SOURCE 4 STRAIN: MAC251; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS GP41, SIV, HIV-1, MEMBRANE FUSION, SIX-HELIX BUNDLE, TRIMER-OF- KEYWDS 2 HAIRPINS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LIU,S.WANG,C.C.LABRANCHE,J.A.HOXIE,M.LU REVDAT 5 16-AUG-23 1JPX 1 SEQADV REVDAT 4 09-AUG-17 1JPX 1 SOURCE REMARK REVDAT 3 13-JUL-11 1JPX 1 VERSN REVDAT 2 24-FEB-09 1JPX 1 VERSN REVDAT 1 24-APR-02 1JPX 0 JRNL AUTH J.LIU,S.WANG,J.A.HOXIE,C.C.LABRANCHE,M.LU JRNL TITL MUTATIONS THAT DESTABILIZE THE GP41 CORE ARE DETERMINANTS JRNL TITL 2 FOR STABILIZING THE SIMIAN IMMUNODEFICIENCY VIRUS-CPMAC JRNL TITL 3 ENVELOPE GLYCOPROTEIN COMPLEX. JRNL REF J.BIOL.CHEM. V. 277 12891 2002 JRNL REFN ISSN 0021-9258 JRNL PMID 11830586 JRNL DOI 10.1074/JBC.M110315200 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 469445.280 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 9729 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.500 REMARK 3 FREE R VALUE TEST SET COUNT : 926 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.012 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.40 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1020 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE : 0.3570 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 12.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 147 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.032 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 65 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 14.97700 REMARK 3 B22 (A**2) : 14.97700 REMARK 3 B33 (A**2) : -29.95400 REMARK 3 B12 (A**2) : 7.71700 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.33 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.40 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 17.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.510 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.280 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.290 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.740 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.960 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 112.5 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JPX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-AUG-01. REMARK 100 THE DEPOSITION ID IS D_1000014049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-01 REMARK 200 TEMPERATURE (KELVIN) : 95.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9480 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9729 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.20900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1QBZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CHLORIDE, CTAB, BARIUM REMARK 280 CHLORIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.57000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.57000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.57000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER GENERATED FROM EACH OF REMARK 300 THE THREE MONOMERS BY THE THREE FOLD AXIS. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 82.48950 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 47.62534 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 95.25067 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 54.99300 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 27.49650 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 47.62534 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 27.49650 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 47.62534 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -27.49650 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 47.62534 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 1 REMARK 465 THR A 2 REMARK 465 LEU A 3 REMARK 465 LEU A 4 REMARK 465 ALA A 5 REMARK 465 ASN A 34 REMARK 465 LEU A 35 REMARK 465 GLN A 36 REMARK 465 THR A 37 REMARK 465 ARG A 38 REMARK 465 VAL A 39 REMARK 465 THR A 40 REMARK 465 SER A 41 REMARK 465 GLY A 42 REMARK 465 GLY A 43 REMARK 465 ARG A 44 REMARK 465 GLY A 45 REMARK 465 GLY A 46 REMARK 465 TRP A 47 REMARK 465 LEU A 79 REMARK 465 GLN A 80 REMARK 465 LYS A 81 REMARK 465 LEU A 82 REMARK 465 ASN A 83 REMARK 465 SER A 84 REMARK 465 ARG D 1 REMARK 465 THR D 2 REMARK 465 LEU D 3 REMARK 465 LEU D 4 REMARK 465 ALA D 5 REMARK 465 ASN D 34 REMARK 465 LEU D 35 REMARK 465 GLN D 36 REMARK 465 THR D 37 REMARK 465 ARG D 38 REMARK 465 VAL D 39 REMARK 465 THR D 40 REMARK 465 SER D 41 REMARK 465 GLY D 42 REMARK 465 GLY D 43 REMARK 465 ARG D 44 REMARK 465 GLY D 45 REMARK 465 GLY D 46 REMARK 465 TRP D 47 REMARK 465 GLN D 48 REMARK 465 GLU D 78 REMARK 465 LEU D 79 REMARK 465 GLN D 80 REMARK 465 LYS D 81 REMARK 465 LEU D 82 REMARK 465 ASN D 83 REMARK 465 SER D 84 REMARK 465 ARG G 1 REMARK 465 THR G 2 REMARK 465 LEU G 3 REMARK 465 LEU G 4 REMARK 465 ALA G 5 REMARK 465 ASN G 34 REMARK 465 LEU G 35 REMARK 465 GLN G 36 REMARK 465 THR G 37 REMARK 465 ARG G 38 REMARK 465 VAL G 39 REMARK 465 THR G 40 REMARK 465 SER G 41 REMARK 465 GLY G 42 REMARK 465 GLY G 43 REMARK 465 ARG G 44 REMARK 465 GLY G 45 REMARK 465 GLY G 46 REMARK 465 TRP G 47 REMARK 465 MET G 76 REMARK 465 TYR G 77 REMARK 465 GLU G 78 REMARK 465 LEU G 79 REMARK 465 GLN G 80 REMARK 465 LYS G 81 REMARK 465 LEU G 82 REMARK 465 ASN G 83 REMARK 465 SER G 84 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 GLU A 51 CB CG CD OE1 OE2 REMARK 470 ASN A 60 CG OD1 ND2 REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 MET A 76 CG SD CE REMARK 470 LYS D 33 CG CD CE NZ REMARK 470 GLU D 51 CB CG CD OE1 OE2 REMARK 470 ASN D 60 CG OD1 ND2 REMARK 470 LYS G 33 CG CD CE NZ REMARK 470 GLU G 51 CB CG CD OE1 OE2 REMARK 470 ASN G 60 CG OD1 ND2 REMARK 470 GLU G 73 CG CD OE1 OE2 REMARK 470 LYS G 74 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 33 O HOH A 160 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QBZ RELATED DB: PDB REMARK 900 RELATED ID: 1JQ0 RELATED DB: PDB REMARK 900 1JQ0 IS THE MUTANT VERSION OF THIS ENTRY. DBREF 1JPX A 1 40 UNP Q87972 Q87972_SIVCZ 555 594 DBREF 1JPX A 47 84 UNP Q87972 Q87972_SIVCZ 637 674 DBREF 1JPX D 1 40 UNP Q87972 Q87972_SIVCZ 555 594 DBREF 1JPX D 47 84 UNP Q87972 Q87972_SIVCZ 637 674 DBREF 1JPX G 1 40 UNP Q87972 Q87972_SIVCZ 555 594 DBREF 1JPX G 47 84 UNP Q87972 Q87972_SIVCZ 637 674 SEQADV 1JPX SER A 41 UNP Q87972 LINKER SEQADV 1JPX GLY A 42 UNP Q87972 LINKER SEQADV 1JPX GLY A 43 UNP Q87972 LINKER SEQADV 1JPX ARG A 44 UNP Q87972 LINKER SEQADV 1JPX GLY A 45 UNP Q87972 LINKER SEQADV 1JPX GLY A 46 UNP Q87972 LINKER SEQADV 1JPX SER D 41 UNP Q87972 LINKER SEQADV 1JPX GLY D 42 UNP Q87972 LINKER SEQADV 1JPX GLY D 43 UNP Q87972 LINKER SEQADV 1JPX ARG D 44 UNP Q87972 LINKER SEQADV 1JPX GLY D 45 UNP Q87972 LINKER SEQADV 1JPX GLY D 46 UNP Q87972 LINKER SEQADV 1JPX SER G 41 UNP Q87972 LINKER SEQADV 1JPX GLY G 42 UNP Q87972 LINKER SEQADV 1JPX GLY G 43 UNP Q87972 LINKER SEQADV 1JPX ARG G 44 UNP Q87972 LINKER SEQADV 1JPX GLY G 45 UNP Q87972 LINKER SEQADV 1JPX GLY G 46 UNP Q87972 LINKER SEQRES 1 A 84 ARG THR LEU LEU ALA GLY ILE VAL GLN GLN GLN GLN GLN SEQRES 2 A 84 LEU LEU ASP VAL VAL LYS ARG GLN GLN GLU LEU LEU ARG SEQRES 3 A 84 LEU THR VAL TRP GLY THR LYS ASN LEU GLN THR ARG VAL SEQRES 4 A 84 THR SER GLY GLY ARG GLY GLY TRP GLN GLU TRP GLU ARG SEQRES 5 A 84 LYS VAL ASP PHE LEU GLU GLU ASN ILE THR ALA LEU LEU SEQRES 6 A 84 GLU GLU ALA GLN ILE GLN GLN GLU LYS ASN MET TYR GLU SEQRES 7 A 84 LEU GLN LYS LEU ASN SER SEQRES 1 D 84 ARG THR LEU LEU ALA GLY ILE VAL GLN GLN GLN GLN GLN SEQRES 2 D 84 LEU LEU ASP VAL VAL LYS ARG GLN GLN GLU LEU LEU ARG SEQRES 3 D 84 LEU THR VAL TRP GLY THR LYS ASN LEU GLN THR ARG VAL SEQRES 4 D 84 THR SER GLY GLY ARG GLY GLY TRP GLN GLU TRP GLU ARG SEQRES 5 D 84 LYS VAL ASP PHE LEU GLU GLU ASN ILE THR ALA LEU LEU SEQRES 6 D 84 GLU GLU ALA GLN ILE GLN GLN GLU LYS ASN MET TYR GLU SEQRES 7 D 84 LEU GLN LYS LEU ASN SER SEQRES 1 G 84 ARG THR LEU LEU ALA GLY ILE VAL GLN GLN GLN GLN GLN SEQRES 2 G 84 LEU LEU ASP VAL VAL LYS ARG GLN GLN GLU LEU LEU ARG SEQRES 3 G 84 LEU THR VAL TRP GLY THR LYS ASN LEU GLN THR ARG VAL SEQRES 4 G 84 THR SER GLY GLY ARG GLY GLY TRP GLN GLU TRP GLU ARG SEQRES 5 G 84 LYS VAL ASP PHE LEU GLU GLU ASN ILE THR ALA LEU LEU SEQRES 6 G 84 GLU GLU ALA GLN ILE GLN GLN GLU LYS ASN MET TYR GLU SEQRES 7 G 84 LEU GLN LYS LEU ASN SER FORMUL 4 HOH *65(H2 O) HELIX 1 1 GLY A 6 LYS A 33 1 28 HELIX 2 2 GLU A 49 MET A 76 1 28 HELIX 3 3 GLY D 6 LYS D 33 1 28 HELIX 4 4 GLU D 49 MET D 76 1 28 HELIX 5 5 GLY G 6 LYS G 33 1 28 HELIX 6 6 GLU G 49 ASN G 75 1 27 CRYST1 54.993 54.993 131.140 90.00 90.00 120.00 P 63 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018184 0.010499 0.000000 0.00000 SCALE2 0.000000 0.020997 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007625 0.00000 TER 480 GLU A 78 TER 953 TYR D 77 TER 1407 ASN G 75 HETATM 1408 O HOH A 110 35.033 62.732 23.220 1.00 33.20 O HETATM 1409 O HOH A 112 26.637 56.416 -21.681 1.00 61.45 O HETATM 1410 O HOH A 113 31.056 64.191 13.166 1.00 29.95 O HETATM 1411 O HOH A 114 21.147 49.225 -22.113 1.00 30.13 O HETATM 1412 O HOH A 116 27.548 58.140 4.776 1.00 46.84 O HETATM 1413 O HOH A 117 38.316 54.771 20.580 1.00 31.00 O HETATM 1414 O HOH A 118 39.800 53.113 22.090 1.00 37.50 O HETATM 1415 O HOH A 119 34.072 52.085 20.435 1.00 43.94 O HETATM 1416 O HOH A 120 29.352 58.936 13.213 1.00 35.80 O HETATM 1417 O HOH A 121 28.512 61.698 13.730 1.00 39.96 O HETATM 1418 O HOH A 122 19.802 44.749 -23.570 1.00 50.13 O HETATM 1419 O HOH A 123 24.546 58.237 18.662 1.00 44.97 O HETATM 1420 O HOH A 124 22.817 43.440 -22.897 1.00 35.76 O HETATM 1421 O HOH A 125 25.416 49.342 23.520 1.00 27.10 O HETATM 1422 O HOH A 126 19.727 56.843 7.288 1.00 42.23 O HETATM 1423 O HOH A 127 19.598 57.845 11.655 1.00 66.38 O HETATM 1424 O HOH A 128 20.976 58.934 6.458 1.00 33.76 O HETATM 1425 O HOH A 129 21.827 57.673 11.811 1.00 25.16 O HETATM 1426 O HOH A 130 20.143 46.537 -26.423 1.00 56.07 O HETATM 1427 O HOH A 131 15.330 52.108 -23.621 1.00 35.16 O HETATM 1428 O HOH A 132 18.493 49.593 -26.815 1.00 42.05 O HETATM 1429 O HOH A 136 15.027 49.423 -24.872 1.00 39.56 O HETATM 1430 O HOH A 139 19.268 67.155 -16.712 1.00 34.99 O HETATM 1431 O HOH A 140 30.377 65.361 -8.993 1.00 54.99 O HETATM 1432 O HOH A 141 32.095 59.956 16.305 1.00 45.77 O HETATM 1433 O HOH A 142 19.418 63.513 0.068 1.00 48.97 O HETATM 1434 O HOH A 143 41.615 53.204 18.274 1.00 30.72 O HETATM 1435 O HOH A 144 37.139 63.312 10.626 1.00 32.68 O HETATM 1436 O HOH A 145 15.301 55.708 -22.773 1.00 35.44 O HETATM 1437 O HOH A 146 14.576 60.021 -24.319 1.00 32.37 O HETATM 1438 O HOH A 147 20.637 65.270 -19.453 1.00 46.75 O HETATM 1439 O HOH A 148 18.236 64.764 -18.474 1.00 37.05 O HETATM 1440 O HOH A 160 24.507 54.986 20.881 1.00 33.01 O HETATM 1441 O HOH A 161 25.175 53.348 23.087 1.00 28.13 O HETATM 1442 O HOH A 162 27.774 52.485 24.284 1.00 39.67 O HETATM 1443 O HOH D 102 25.255 26.301 83.033 1.00 37.70 O HETATM 1444 O HOH D 104 21.613 24.602 82.954 1.00 40.72 O HETATM 1445 O HOH D 106 14.949 21.940 74.457 1.00 54.27 O HETATM 1446 O HOH D 107 12.557 27.365 54.600 1.00 42.18 O HETATM 1447 O HOH D 133 17.453 22.223 81.598 1.00 72.46 O HETATM 1448 O HOH D 134 24.929 29.344 85.742 1.00 47.72 O HETATM 1449 O HOH D 137 16.449 20.066 63.697 1.00 44.09 O HETATM 1450 O HOH D 138 15.693 16.229 55.568 1.00 42.55 O HETATM 1451 O HOH D 149 22.086 28.620 90.000 1.00 48.76 O HETATM 1452 O HOH D 150 23.352 25.760 92.289 1.00 84.07 O HETATM 1453 O HOH D 151 28.058 23.355 91.247 1.00 42.02 O HETATM 1454 O HOH D 152 35.867 27.411 89.142 1.00 36.67 O HETATM 1455 O HOH D 154 35.903 31.015 90.446 1.00 48.26 O HETATM 1456 O HOH D 163 14.503 20.842 69.655 1.00 40.11 O HETATM 1457 O HOH D 164 20.430 14.749 88.814 1.00 50.53 O HETATM 1458 O HOH D 165 26.112 18.593 93.072 1.00 49.03 O HETATM 1459 O HOH G 101 7.545 22.655 96.201 1.00 30.72 O HETATM 1460 O HOH G 103 1.654 18.931 63.842 1.00 37.51 O HETATM 1461 O HOH G 105 6.928 16.880 92.858 1.00 49.54 O HETATM 1462 O HOH G 108 10.602 40.523 59.449 1.00 28.94 O HETATM 1463 O HOH G 109 3.981 20.210 66.285 1.00 63.61 O HETATM 1464 O HOH G 111 15.529 24.087 73.361 1.00 38.81 O HETATM 1465 O HOH G 115 14.851 37.514 48.858 1.00 30.67 O HETATM 1466 O HOH G 135 11.688 42.986 54.772 1.00 38.48 O HETATM 1467 O HOH G 153 4.164 24.940 94.456 1.00 46.92 O HETATM 1468 O HOH G 155 6.326 28.834 96.088 1.00 43.26 O HETATM 1469 O HOH G 156 5.446 31.150 95.200 1.00 23.12 O HETATM 1470 O HOH G 157 8.972 17.526 75.528 1.00 54.16 O HETATM 1471 O HOH G 158 4.115 28.036 50.115 1.00 41.02 O HETATM 1472 O HOH G 159 16.073 38.639 52.733 1.00 36.59 O MASTER 388 0 0 6 0 0 0 6 1469 3 0 21 END