HEADER HYDROLASE 07-AUG-01 1JQG TITLE CRYSTAL STRUCTURE OF THE CARBOXYPEPTIDASE A FROM HELICOVERPA ARMIGERA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOXYPEPTIDASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROCARBOXYPEPTIDASE A; COMPND 5 EC: 3.4.17.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOVERPA ARMIGERA; SOURCE 3 ORGANISM_COMMON: COTTON BOLLWORM; SOURCE 4 ORGANISM_TAXID: 29058; SOURCE 5 TISSUE: MIDGUT; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: GS115; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPIC9 KEYWDS PRO-PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.ESTEBANEZ-PERPINA,A.BAYES,J.VENDRELL,M.A.JONGSMA,D.P.BOWN, AUTHOR 2 J.A.GATEHOUSE,R.HUBER,W.BODE,F.X.AVILES,D.REVERTER REVDAT 3 16-AUG-23 1JQG 1 REMARK LINK REVDAT 2 24-FEB-09 1JQG 1 VERSN REVDAT 1 07-AUG-02 1JQG 0 JRNL AUTH E.ESTEBANEZ-PERPINA,A.BAYES,J.VENDRELL,M.A.JONGSMA,D.P.BOWN, JRNL AUTH 2 J.A.GATEHOUSE,R.HUBER,W.BODE,F.X.AVILES,D.REVERTER JRNL TITL CRYSTAL STRUCTURE OF A NOVEL MID-GUT PROCARBOXYPEPTIDASE JRNL TITL 2 FROM THE COTTON PEST HELICOVERPA ARMIGERA. JRNL REF J.MOL.BIOL. V. 313 629 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11676544 JRNL DOI 10.1006/JMBI.2001.5076 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.P.BOWN,H.S.WILKINSON,J.A.GATEHOUSE REMARK 1 TITL MIDGUT CARBOXYPEPTIDASE FROM HELICOVERPA ARMIGERA REMARK 1 TITL 2 (LEPIDOPTERA: NOCTUIDAE) LARVAE: ENZYME CHARACTERISATION, REMARK 1 TITL 3 CDNA CLONING AND EXPRESSION. REMARK 1 REF INSECT BIOCHEM.MOL.BIOL. V. 28 739 1998 REMARK 1 REFN ISSN 0965-1748 REMARK 1 DOI 10.1016/S0965-1748(98)00067-8 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.843 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 18816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 981 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.60 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE : 0.2270 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 61 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3229 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 157 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JQG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-AUG-01. REMARK 100 THE DEPOSITION ID IS D_1000014068. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-00 REMARK 200 TEMPERATURE (KELVIN) : 298.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21449 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 10.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.03400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1AYE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, NA-ACETATE, NA-CACODYLATE, REMARK 280 PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.19500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 LYS A -12 REMARK 465 TYR A -11 REMARK 465 LEU A -10 REMARK 465 PHE A -9 REMARK 465 ILE A -8 REMARK 465 PHE A -7 REMARK 465 CYS A -6 REMARK 465 LEU A -5 REMARK 465 PHE A -4 REMARK 465 VAL A -3 REMARK 465 ALA A -2 REMARK 465 GLY A -1 REMARK 465 VAL A 0 REMARK 465 LEU A 1P REMARK 465 ALA A 2P REMARK 465 LYS A 3P REMARK 465 LEU A 311 REMARK 465 LYS A 312 REMARK 465 LYS A 313 REMARK 465 LEU A 314 REMARK 465 ASN A 315 REMARK 465 THR A 316 REMARK 465 ALA A 317 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N GLU A 89P O HOH A 444 1556 0.83 REMARK 500 C LEU A 88P O HOH A 444 1556 1.12 REMARK 500 CA LEU A 88P ND2 ASN A 187 1556 1.27 REMARK 500 CB LEU A 92P O HOH A 556 1556 1.28 REMARK 500 CB LEU A 88P ND2 ASN A 187 1556 1.29 REMARK 500 CA GLU A 89P O HOH A 444 1556 1.35 REMARK 500 O HOH A 526 O HOH A 562 2646 1.37 REMARK 500 C GLN A 85P O HOH A 445 1556 1.47 REMARK 500 N LEU A 86P O HOH A 445 1556 1.53 REMARK 500 O LEU A 88P O HOH A 444 1556 1.57 REMARK 500 O GLU A 84P OD1 ASN A 187 1556 1.58 REMARK 500 O SER A 274 O GLU A 310 1556 1.65 REMARK 500 CA LEU A 77P O HOH A 462 1556 1.65 REMARK 500 N LEU A 77P O HOH A 462 1556 1.71 REMARK 500 CA LEU A 92P O HOH A 556 1556 1.72 REMARK 500 CD LYS A 83P NH2 ARG A 186A 1556 1.76 REMARK 500 NE2 GLN A 91P O HOH A 446 1556 1.85 REMARK 500 CB LEU A 88P CG ASN A 187 1556 1.85 REMARK 500 OE1 GLU A 84P O ALA A 261 1556 1.87 REMARK 500 OE1 GLN A 91P NE ARG A 188 1556 1.88 REMARK 500 O LEU A 77P O HOH A 462 1556 1.90 REMARK 500 O HOH A 418 O HOH A 522 1656 1.92 REMARK 500 O GLN A 85P O HOH A 445 1556 1.92 REMARK 500 CG LEU A 92P O HOH A 556 1556 1.93 REMARK 500 C LEU A 77P O HOH A 462 1556 1.95 REMARK 500 N LEU A 88P ND2 ASN A 187 1556 1.97 REMARK 500 N LEU A 88P CG ASN A 187 1556 2.00 REMARK 500 CB LEU A 77P O HOH A 462 1556 2.01 REMARK 500 CG2 VAL A 275 O HOH A 541 1556 2.02 REMARK 500 C LEU A 92P O HOH A 556 1556 2.04 REMARK 500 C GLU A 89P O HOH A 444 1556 2.06 REMARK 500 CB LEU A 88P OD1 ASN A 187 1556 2.07 REMARK 500 CA LEU A 86P O HOH A 445 1556 2.11 REMARK 500 OE2 GLU A 84P O ARG A 186A 1556 2.14 REMARK 500 O GLU A 84P CG ASN A 187 1556 2.17 REMARK 500 CA LEU A 88P CG ASN A 187 1556 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 61P NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 4 NE - CZ - NH2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG A 45 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 HIS A 69 CG - ND1 - CE1 ANGL. DEV. = 12.6 DEGREES REMARK 500 HIS A 69 ND1 - CE1 - NE2 ANGL. DEV. = -9.0 DEGREES REMARK 500 GLU A 72 OE1 - CD - OE2 ANGL. DEV. = 11.1 DEGREES REMARK 500 ARG A 130 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 168 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG A 186A NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 HIS A 196 CG - ND1 - CE1 ANGL. DEV. = 8.8 DEGREES REMARK 500 SER A 197 N - CA - CB ANGL. DEV. = 9.7 DEGREES REMARK 500 SER A 197 O - C - N ANGL. DEV. = -22.2 DEGREES REMARK 500 PHE A 198 CA - C - N ANGL. DEV. = 15.8 DEGREES REMARK 500 PHE A 198 O - C - N ANGL. DEV. = -11.7 DEGREES REMARK 500 GLY A 205 O - C - N ANGL. DEV. = 10.4 DEGREES REMARK 500 GLY A 207 O - C - N ANGL. DEV. = -10.0 DEGREES REMARK 500 ASP A 231 CB - CG - OD1 ANGL. DEV. = -8.4 DEGREES REMARK 500 ARG A 302 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 50P 88.21 -152.60 REMARK 500 LYS A 76P 146.93 -173.77 REMARK 500 VAL A 87 -59.80 -122.22 REMARK 500 ASP A 89 75.43 -119.33 REMARK 500 ARG A 188 19.56 -140.77 REMARK 500 TYR A 206 123.50 -176.38 REMARK 500 ASN A 215 37.42 -94.02 REMARK 500 LEU A 247 -102.13 -99.45 REMARK 500 ALA A 262 -81.92 -159.41 REMARK 500 VAL A 275 -71.00 -89.30 REMARK 500 PHE A 277 -103.69 -105.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 197 PHE A 198 57.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER A 197 28.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 413 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 69 ND1 REMARK 620 2 GLU A 72 OE1 106.6 REMARK 620 3 HIS A 196 ND1 101.2 116.3 REMARK 620 4 HOH A 513 O 110.7 110.4 111.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 413 DBREF 1JQG A -13 317 UNP O97389 O97389_HELAM 1 433 SEQRES 1 A 433 MET LYS TYR LEU PHE ILE PHE CYS LEU PHE VAL ALA GLY SEQRES 2 A 433 VAL LEU ALA LYS HIS GLU ILE TYR ASP GLY HIS ALA VAL SEQRES 3 A 433 TYR GLN VAL ASP VAL ALA SER MET ASP GLN VAL LYS LEU SEQRES 4 A 433 VAL HIS ASP PHE GLU ASN ASP LEU MET LEU ASP VAL TRP SEQRES 5 A 433 SER ASP ALA VAL PRO GLY ARG PRO GLY LYS VAL LEU VAL SEQRES 6 A 433 PRO LYS PHE LYS ARG GLU ILE PHE GLU ASN PHE LEU LYS SEQRES 7 A 433 GLN SER GLY VAL GLN TYR LYS LEU GLU VAL GLU ASN VAL SEQRES 8 A 433 LYS GLU GLN LEU GLU LEU GLU ASP GLN LEU LEU ALA ALA SEQRES 9 A 433 ALA ALA ALA LYS SER ASN SER THR ARG SER ARG LEU SER SEQRES 10 A 433 PHE ASP LYS ILE HIS SER TYR GLU GLU VAL ASP ALA TYR SEQRES 11 A 433 LEU GLN GLU LEU ALA LYS GLU PHE PRO ASN VAL VAL THR SEQRES 12 A 433 VAL VAL GLU GLY GLY LYS SER PHE GLU GLY ARG SER ILE SEQRES 13 A 433 LYS TYR LEU ARG ILE SER THR THR ASN PHE GLN ASP ALA SEQRES 14 A 433 SER LYS PRO VAL VAL MET MET GLN SER LEU LEU HIS CYS SEQRES 15 A 433 ARG GLU TRP VAL THR LEU PRO ALA THR LEU TYR ALA ILE SEQRES 16 A 433 HIS LYS LEU VAL ILE ASP VAL THR GLU SER ASP LEU ILE SEQRES 17 A 433 ASN ASN ILE ASP TRP ILE ILE LEU PRO VAL ALA ASN PRO SEQRES 18 A 433 ASP GLY TYR VAL HIS THR PHE GLY GLY ASP ARG TYR TRP SEQRES 19 A 433 ARG LYS ASN ARG ALA THR GLY TYR MET ALA GLY ASN LEU SEQRES 20 A 433 CYS MET GLY VAL ASP LEU ASN ARG ASN PHE GLY MET ASN SEQRES 21 A 433 TRP GLY THR ALA SER SER SER SER VAL CYS SER ASP THR SEQRES 22 A 433 PHE HIS GLY ARG SER ALA PHE SER GLU PRO GLU SER SER SEQRES 23 A 433 VAL ILE ARG ASP ILE ILE ALA GLU HIS ARG ASN ARG MET SEQRES 24 A 433 ALA LEU TYR LEU ASP ILE HIS SER PHE GLY SER MET ILE SEQRES 25 A 433 LEU TYR GLY TYR GLY ASN GLY VAL LEU PRO SER ASN ALA SEQRES 26 A 433 LEU GLN LEU HIS LEU ILE GLY VAL GLN MET ALA GLN ALA SEQRES 27 A 433 ILE ASP ARG VAL LYS TRP SER SER ASN LYS ASP TYR ILE SEQRES 28 A 433 VAL GLY ASN ILE PHE HIS VAL LEU TYR ALA ALA SER GLY SEQRES 29 A 433 GLY ALA SER ASP TYR ALA MET GLN ALA ALA ALA PRO PHE SEQRES 30 A 433 SER TYR THR TYR GLU LEU PRO ALA TYR ARG ASN SER VAL SEQRES 31 A 433 TRP PHE ASP GLY PHE LEU VAL ASP PRO ASP PHE ILE GLU SEQRES 32 A 433 GLN ALA GLY PHE GLU THR TRP GLU GLY ILE LYS VAL GLY SEQRES 33 A 433 ALA ARG ALA ALA ALA ALA ALA ALA LYS GLU LEU LYS LYS SEQRES 34 A 433 LEU ASN THR ALA HET ZN A 413 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *157(H2 O) HELIX 1 1 SER A 19P LEU A 33P 1 15 HELIX 2 2 PRO A 57P PHE A 59P 5 3 HELIX 3 3 LYS A 60P GLY A 72P 1 13 HELIX 4 4 VAL A 82P SER A 100P 1 19 HELIX 5 5 SER A 14 PHE A 29 1 16 HELIX 6 6 VAL A 74 ILE A 88 1 15 HELIX 7 7 SER A 93 ASN A 102 1 6 HELIX 8 8 ASN A 112 GLY A 121 1 10 HELIX 9 9 MET A 133B LEU A 137 5 5 HELIX 10 10 ASP A 142 ASN A 146 5 5 HELIX 11 11 GLU A 173 HIS A 186 1 14 HELIX 12 12 ASN A 215 ARG A 232 1 18 HELIX 13 13 ILE A 243 LEU A 247 1 5 HELIX 14 14 GLY A 253 ALA A 262 1 10 HELIX 15 15 PHE A 285 ALA A 306 1 22 SHEET 1 B 8 VAL A 33 LYS A 40 0 SHEET 2 B 8 SER A 46 ILE A 52 -1 N ILE A 47 O GLY A 39 SHEET 3 B 8 ASP A 104 LEU A 108 -1 N TRP A 105 O ILE A 52 SHEET 4 B 8 VAL A 61 SER A 66 1 N VAL A 62 O ASP A 104 SHEET 5 B 8 MET A 189 HIS A 196 1 N ALA A 190 O VAL A 61 SHEET 6 B 8 PHE A 265 GLU A 270 1 O PHE A 265 N TYR A 192 SHEET 7 B 8 MET A 201 TYR A 204 -1 O MET A 201 N GLU A 270 SHEET 8 B 8 ILE A 239 ASN A 242 1 O ILE A 239 N ILE A 202 SSBOND 1 CYS A 138 CYS A 161 1555 1555 2.00 LINK ND1 HIS A 69 ZN ZN A 413 1555 1555 2.24 LINK OE1 GLU A 72 ZN ZN A 413 1555 1555 2.25 LINK ND1 HIS A 196 ZN ZN A 413 1555 1555 2.36 LINK ZN ZN A 413 O HOH A 513 1555 1555 2.44 SITE 1 AC1 4 HIS A 69 GLU A 72 HIS A 196 HOH A 513 CRYST1 48.030 86.390 50.550 90.00 100.70 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020820 0.000000 0.003934 0.00000 SCALE2 0.000000 0.011575 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020132 0.00000