data_1JSX # _entry.id 1JSX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1JSX RCSB RCSB014145 WWPDB D_1000014145 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-T35 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1JSX _pdbx_database_status.recvd_initial_deposition_date 2001-08-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Romanowski, M.J.' 1 ? 'Bonanno, J.B.' 2 ? 'Burley, S.K.' 3 0000-0002-2487-9713 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 4 ? # _citation.id primary _citation.title 'Crystal structure of the Escherichia coli glucose-inhibited division protein B (GidB) reveals a methyltransferase fold.' _citation.journal_abbrev Proteins _citation.journal_volume 47 _citation.page_first 563 _citation.page_last 567 _citation.year 2002 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12001236 _citation.pdbx_database_id_DOI 10.1002/prot.10121.abs # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Romanowski, M.J.' 1 ? primary 'Bonanno, J.B.' 2 ? primary 'Burley, S.K.' 3 0000-0002-2487-9713 # _cell.entry_id 1JSX _cell.length_a 53.914 _cell.length_b 53.914 _cell.length_c 150.592 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1JSX _symmetry.space_group_name_H-M 'P 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glucose-inhibited division protein B' 23461.102 1 ? ? ? ? 2 water nat water 18.015 127 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPG IPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI ; _entity_poly.pdbx_seq_one_letter_code_can ;MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPG IPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGXRC-T35 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 ASN n 1 4 LYS n 1 5 LEU n 1 6 SER n 1 7 LEU n 1 8 LEU n 1 9 LEU n 1 10 LYS n 1 11 ASP n 1 12 ALA n 1 13 GLY n 1 14 ILE n 1 15 SER n 1 16 LEU n 1 17 THR n 1 18 ASP n 1 19 HIS n 1 20 GLN n 1 21 LYS n 1 22 ASN n 1 23 GLN n 1 24 LEU n 1 25 ILE n 1 26 ALA n 1 27 TYR n 1 28 VAL n 1 29 ASN n 1 30 MET n 1 31 LEU n 1 32 HIS n 1 33 LYS n 1 34 TRP n 1 35 ASN n 1 36 LYS n 1 37 ALA n 1 38 TYR n 1 39 ASN n 1 40 LEU n 1 41 THR n 1 42 SER n 1 43 VAL n 1 44 ARG n 1 45 ASP n 1 46 PRO n 1 47 ASN n 1 48 GLU n 1 49 MET n 1 50 LEU n 1 51 VAL n 1 52 ARG n 1 53 HIS n 1 54 ILE n 1 55 LEU n 1 56 ASP n 1 57 SER n 1 58 ILE n 1 59 VAL n 1 60 VAL n 1 61 ALA n 1 62 PRO n 1 63 TYR n 1 64 LEU n 1 65 GLN n 1 66 GLY n 1 67 GLU n 1 68 ARG n 1 69 PHE n 1 70 ILE n 1 71 ASP n 1 72 VAL n 1 73 GLY n 1 74 THR n 1 75 GLY n 1 76 PRO n 1 77 GLY n 1 78 LEU n 1 79 PRO n 1 80 GLY n 1 81 ILE n 1 82 PRO n 1 83 LEU n 1 84 SER n 1 85 ILE n 1 86 VAL n 1 87 ARG n 1 88 PRO n 1 89 GLU n 1 90 ALA n 1 91 HIS n 1 92 PHE n 1 93 THR n 1 94 LEU n 1 95 LEU n 1 96 ASP n 1 97 SER n 1 98 LEU n 1 99 GLY n 1 100 LYS n 1 101 ARG n 1 102 VAL n 1 103 ARG n 1 104 PHE n 1 105 LEU n 1 106 ARG n 1 107 GLN n 1 108 VAL n 1 109 GLN n 1 110 HIS n 1 111 GLU n 1 112 LEU n 1 113 LYS n 1 114 LEU n 1 115 GLU n 1 116 ASN n 1 117 ILE n 1 118 GLU n 1 119 PRO n 1 120 VAL n 1 121 GLN n 1 122 SER n 1 123 ARG n 1 124 VAL n 1 125 GLU n 1 126 GLU n 1 127 PHE n 1 128 PRO n 1 129 SER n 1 130 GLU n 1 131 PRO n 1 132 PRO n 1 133 PHE n 1 134 ASP n 1 135 GLY n 1 136 VAL n 1 137 ILE n 1 138 SER n 1 139 ARG n 1 140 ALA n 1 141 PHE n 1 142 ALA n 1 143 SER n 1 144 LEU n 1 145 ASN n 1 146 ASP n 1 147 MET n 1 148 VAL n 1 149 SER n 1 150 TRP n 1 151 CYS n 1 152 HIS n 1 153 HIS n 1 154 LEU n 1 155 PRO n 1 156 GLY n 1 157 GLU n 1 158 GLN n 1 159 GLY n 1 160 ARG n 1 161 PHE n 1 162 TYR n 1 163 ALA n 1 164 LEU n 1 165 LYS n 1 166 GLY n 1 167 GLN n 1 168 MET n 1 169 PRO n 1 170 GLU n 1 171 ASP n 1 172 GLU n 1 173 ILE n 1 174 ALA n 1 175 LEU n 1 176 LEU n 1 177 PRO n 1 178 GLU n 1 179 GLU n 1 180 TYR n 1 181 GLN n 1 182 VAL n 1 183 GLU n 1 184 SER n 1 185 VAL n 1 186 VAL n 1 187 LYS n 1 188 LEU n 1 189 GLN n 1 190 VAL n 1 191 PRO n 1 192 ALA n 1 193 LEU n 1 194 ASP n 1 195 GLY n 1 196 GLU n 1 197 ARG n 1 198 HIS n 1 199 LEU n 1 200 VAL n 1 201 VAL n 1 202 ILE n 1 203 LYS n 1 204 ALA n 1 205 ASN n 1 206 LYS n 1 207 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene gidB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX6P1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GIDB_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPG IPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P0A6U5 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1JSX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 207 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A6U5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 207 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 207 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1JSX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_percent_sol 47.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '15% PEG4000, 10% isopropanol, 0.1M sodium citrate pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 150 ? 1 2 150 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD MARRESEARCH 2000-10-20 ;Primary Aperture - 7.4 m from source. Be Windows front end - 0.020" thick, 7.1 m from source exit window - 0.010" thick. White X-Ray Beam. ; 2 CCD MARRESEARCH 2001-03-28 ;Primary Aperture - 7.4 m from source. Be Windows front end - 0.020" thick, 7.1 m from source exit window: 0.010" thick. White X-Ray Beam. ; # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'Si 111' MAD x-ray 2 1 M 'Si 111' 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97903 1.0 2 0.97927 1.0 3 0.98399 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'NSLS BEAMLINE X9A' NSLS X9A ? '0.97903, 0.97927' 2 SYNCHROTRON 'NSLS BEAMLINE X9A' NSLS X9A ? 0.98399 # _reflns.entry_id 1JSX _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.4 _reflns.number_obs 9170 _reflns.number_all 9170 _reflns.percent_possible_obs 91.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0780000 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 27.6 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.55 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1JSX _refine.ls_number_reflns_obs 9170 _refine.ls_number_reflns_all 9170 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 663404.35 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 17.97 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 98.7 _refine.ls_R_factor_obs 0.2400000 _refine.ls_R_factor_all 0.2345000 _refine.ls_R_factor_R_work 0.2400000 _refine.ls_R_factor_R_free 0.2750000 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.2 _refine.ls_number_reflns_R_free 936 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 36.1 _refine.aniso_B[1][1] 1.38 _refine.aniso_B[2][2] 1.38 _refine.aniso_B[3][3] -2.77 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.375812 _refine.solvent_model_param_bsol 41.6735 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1JSX _refine_analyze.Luzzati_coordinate_error_obs 0.30 _refine_analyze.Luzzati_sigma_a_obs 0.12 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.38 _refine_analyze.Luzzati_sigma_a_free 0.27 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1542 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 127 _refine_hist.number_atoms_total 1669 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 17.97 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.4 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.81 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.44 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.38 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.71 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.49 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.40 _refine_ls_shell.d_res_low 2.55 _refine_ls_shell.number_reflns_R_work 1338 _refine_ls_shell.R_factor_R_work 0.2310000 _refine_ls_shell.percent_reflns_obs 98.1 _refine_ls_shell.R_factor_R_free 0.3290000 _refine_ls_shell.R_factor_R_free_error 0.027 _refine_ls_shell.percent_reflns_R_free 9.7 _refine_ls_shell.number_reflns_R_free 144 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1JSX _struct.title 'Crystal Structure of the Escherichia coli Glucose-Inhibited Division Protein B (GidB)' _struct.pdbx_descriptor 'Glucose-inhibited division protein B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1JSX _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text ;methyltransferase fold, Structural Genomics, PSI, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 1 ? ASP A 11 ? MET A 1 ASP A 11 1 ? 11 HELX_P HELX_P2 2 THR A 17 ? ASN A 35 ? THR A 17 ASN A 35 1 ? 19 HELX_P HELX_P3 3 GLU A 48 ? ALA A 61 ? GLU A 48 ALA A 61 1 ? 14 HELX_P HELX_P4 4 PRO A 62 ? LEU A 64 ? PRO A 62 LEU A 64 5 ? 3 HELX_P HELX_P5 5 PRO A 79 ? ARG A 87 ? PRO A 79 ARG A 87 1 ? 9 HELX_P HELX_P6 6 LEU A 98 ? LEU A 112 ? LEU A 98 LEU A 112 1 ? 15 HELX_P HELX_P7 7 SER A 143 ? HIS A 152 ? SER A 143 HIS A 152 1 ? 10 HELX_P HELX_P8 8 PRO A 169 ? LEU A 175 ? PRO A 169 LEU A 175 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 78 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 78 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 79 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 79 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.02 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 117 ? GLN A 121 ? ILE A 117 GLN A 121 A 2 HIS A 91 ? ASP A 96 ? HIS A 91 ASP A 96 A 3 ARG A 68 ? VAL A 72 ? ARG A 68 VAL A 72 A 4 PHE A 133 ? ILE A 137 ? PHE A 133 ILE A 137 A 5 PRO A 155 ? LYS A 165 ? PRO A 155 LYS A 165 A 6 GLU A 196 ? ALA A 204 ? GLU A 196 ALA A 204 A 7 TYR A 180 ? GLN A 189 ? TYR A 180 GLN A 189 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 120 ? O VAL A 120 N LEU A 94 ? N LEU A 94 A 2 3 O HIS A 91 ? O HIS A 91 N PHE A 69 ? N PHE A 69 A 3 4 N ILE A 70 ? N ILE A 70 O ILE A 137 ? O ILE A 137 A 4 5 N VAL A 136 ? N VAL A 136 O TYR A 162 ? O TYR A 162 A 5 6 N LYS A 165 ? N LYS A 165 O HIS A 198 ? O HIS A 198 A 6 7 O LYS A 203 ? O LYS A 203 N GLN A 181 ? N GLN A 181 # _database_PDB_matrix.entry_id 1JSX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1JSX _atom_sites.fract_transf_matrix[1][1] 0.018548 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018548 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006640 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 MET 30 30 30 MET MET A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 TRP 34 34 34 TRP TRP A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 LYS 36 36 ? ? ? A . n A 1 37 ALA 37 37 ? ? ? A . n A 1 38 TYR 38 38 ? ? ? A . n A 1 39 ASN 39 39 ? ? ? A . n A 1 40 LEU 40 40 ? ? ? A . n A 1 41 THR 41 41 ? ? ? A . n A 1 42 SER 42 42 ? ? ? A . n A 1 43 VAL 43 43 ? ? ? A . n A 1 44 ARG 44 44 ? ? ? A . n A 1 45 ASP 45 45 ? ? ? A . n A 1 46 PRO 46 46 ? ? ? A . n A 1 47 ASN 47 47 ? ? ? A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 HIS 53 53 53 HIS HIS A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 PRO 131 131 131 PRO PRO A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 MET 147 147 147 MET MET A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 TRP 150 150 150 TRP TRP A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 HIS 152 152 152 HIS HIS A . n A 1 153 HIS 153 153 153 HIS HIS A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 TYR 162 162 162 TYR TYR A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 GLN 167 167 167 GLN GLN A . n A 1 168 MET 168 168 168 MET MET A . n A 1 169 PRO 169 169 169 PRO PRO A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 PRO 177 177 177 PRO PRO A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 TYR 180 180 180 TYR TYR A . n A 1 181 GLN 181 181 181 GLN GLN A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 SER 184 184 184 SER SER A . n A 1 185 VAL 185 185 185 VAL VAL A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 LYS 187 187 187 LYS LYS A . n A 1 188 LEU 188 188 188 LEU LEU A . n A 1 189 GLN 189 189 189 GLN GLN A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 ALA 192 192 ? ? ? A . n A 1 193 LEU 193 193 ? ? ? A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 ARG 197 197 197 ARG ARG A . n A 1 198 HIS 198 198 198 HIS HIS A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 ILE 202 202 202 ILE ILE A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 ASN 205 205 205 ASN ASN A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 ILE 207 207 207 ILE ILE A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 208 1 HOH WAT A . B 2 HOH 2 209 2 HOH WAT A . B 2 HOH 3 210 3 HOH WAT A . B 2 HOH 4 211 4 HOH WAT A . B 2 HOH 5 212 5 HOH WAT A . B 2 HOH 6 213 6 HOH WAT A . B 2 HOH 7 214 7 HOH WAT A . B 2 HOH 8 215 8 HOH WAT A . B 2 HOH 9 216 9 HOH WAT A . B 2 HOH 10 217 10 HOH WAT A . B 2 HOH 11 218 11 HOH WAT A . B 2 HOH 12 219 12 HOH WAT A . B 2 HOH 13 220 13 HOH WAT A . B 2 HOH 14 221 14 HOH WAT A . B 2 HOH 15 222 15 HOH WAT A . B 2 HOH 16 223 16 HOH WAT A . B 2 HOH 17 224 17 HOH WAT A . B 2 HOH 18 225 18 HOH WAT A . B 2 HOH 19 226 19 HOH WAT A . B 2 HOH 20 227 20 HOH WAT A . B 2 HOH 21 228 21 HOH WAT A . B 2 HOH 22 229 22 HOH WAT A . B 2 HOH 23 230 23 HOH WAT A . B 2 HOH 24 231 24 HOH WAT A . B 2 HOH 25 232 25 HOH WAT A . B 2 HOH 26 233 26 HOH WAT A . B 2 HOH 27 234 27 HOH WAT A . B 2 HOH 28 235 28 HOH WAT A . B 2 HOH 29 236 29 HOH WAT A . B 2 HOH 30 237 30 HOH WAT A . B 2 HOH 31 238 31 HOH WAT A . B 2 HOH 32 239 34 HOH WAT A . B 2 HOH 33 240 35 HOH WAT A . B 2 HOH 34 241 36 HOH WAT A . B 2 HOH 35 242 37 HOH WAT A . B 2 HOH 36 243 38 HOH WAT A . B 2 HOH 37 244 39 HOH WAT A . B 2 HOH 38 245 40 HOH WAT A . B 2 HOH 39 246 41 HOH WAT A . B 2 HOH 40 247 42 HOH WAT A . B 2 HOH 41 248 43 HOH WAT A . B 2 HOH 42 249 45 HOH WAT A . B 2 HOH 43 250 46 HOH WAT A . B 2 HOH 44 251 47 HOH WAT A . B 2 HOH 45 252 48 HOH WAT A . B 2 HOH 46 253 49 HOH WAT A . B 2 HOH 47 254 50 HOH WAT A . B 2 HOH 48 255 51 HOH WAT A . B 2 HOH 49 256 52 HOH WAT A . B 2 HOH 50 257 53 HOH WAT A . B 2 HOH 51 258 54 HOH WAT A . B 2 HOH 52 259 55 HOH WAT A . B 2 HOH 53 260 56 HOH WAT A . B 2 HOH 54 261 58 HOH WAT A . B 2 HOH 55 262 59 HOH WAT A . B 2 HOH 56 263 60 HOH WAT A . B 2 HOH 57 264 61 HOH WAT A . B 2 HOH 58 265 62 HOH WAT A . B 2 HOH 59 266 63 HOH WAT A . B 2 HOH 60 267 64 HOH WAT A . B 2 HOH 61 268 65 HOH WAT A . B 2 HOH 62 269 66 HOH WAT A . B 2 HOH 63 270 67 HOH WAT A . B 2 HOH 64 271 68 HOH WAT A . B 2 HOH 65 272 70 HOH WAT A . B 2 HOH 66 273 71 HOH WAT A . B 2 HOH 67 274 73 HOH WAT A . B 2 HOH 68 275 75 HOH WAT A . B 2 HOH 69 276 76 HOH WAT A . B 2 HOH 70 277 77 HOH WAT A . B 2 HOH 71 278 78 HOH WAT A . B 2 HOH 72 279 80 HOH WAT A . B 2 HOH 73 280 81 HOH WAT A . B 2 HOH 74 281 82 HOH WAT A . B 2 HOH 75 282 83 HOH WAT A . B 2 HOH 76 283 84 HOH WAT A . B 2 HOH 77 284 85 HOH WAT A . B 2 HOH 78 285 86 HOH WAT A . B 2 HOH 79 286 87 HOH WAT A . B 2 HOH 80 287 88 HOH WAT A . B 2 HOH 81 288 89 HOH WAT A . B 2 HOH 82 289 90 HOH WAT A . B 2 HOH 83 290 92 HOH WAT A . B 2 HOH 84 291 93 HOH WAT A . B 2 HOH 85 292 95 HOH WAT A . B 2 HOH 86 293 96 HOH WAT A . B 2 HOH 87 294 97 HOH WAT A . B 2 HOH 88 295 98 HOH WAT A . B 2 HOH 89 296 99 HOH WAT A . B 2 HOH 90 297 100 HOH WAT A . B 2 HOH 91 298 101 HOH WAT A . B 2 HOH 92 299 102 HOH WAT A . B 2 HOH 93 300 103 HOH WAT A . B 2 HOH 94 301 104 HOH WAT A . B 2 HOH 95 302 105 HOH WAT A . B 2 HOH 96 303 106 HOH WAT A . B 2 HOH 97 304 107 HOH WAT A . B 2 HOH 98 305 108 HOH WAT A . B 2 HOH 99 306 109 HOH WAT A . B 2 HOH 100 307 110 HOH WAT A . B 2 HOH 101 308 111 HOH WAT A . B 2 HOH 102 309 113 HOH WAT A . B 2 HOH 103 310 115 HOH WAT A . B 2 HOH 104 311 116 HOH WAT A . B 2 HOH 105 312 118 HOH WAT A . B 2 HOH 106 313 119 HOH WAT A . B 2 HOH 107 314 124 HOH WAT A . B 2 HOH 108 315 125 HOH WAT A . B 2 HOH 109 316 126 HOH WAT A . B 2 HOH 110 317 127 HOH WAT A . B 2 HOH 111 318 129 HOH WAT A . B 2 HOH 112 319 130 HOH WAT A . B 2 HOH 113 320 131 HOH WAT A . B 2 HOH 114 321 132 HOH WAT A . B 2 HOH 115 322 133 HOH WAT A . B 2 HOH 116 323 135 HOH WAT A . B 2 HOH 117 324 136 HOH WAT A . B 2 HOH 118 325 137 HOH WAT A . B 2 HOH 119 326 138 HOH WAT A . B 2 HOH 120 327 140 HOH WAT A . B 2 HOH 121 328 141 HOH WAT A . B 2 HOH 122 329 143 HOH WAT A . B 2 HOH 123 330 144 HOH WAT A . B 2 HOH 124 331 147 HOH WAT A . B 2 HOH 125 332 148 HOH WAT A . B 2 HOH 126 333 149 HOH WAT A . B 2 HOH 127 334 154 HOH WAT A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-05-08 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-02-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.identifier_ORCID' 2 4 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 CNS refinement 1.0 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 11 ? ? -57.47 -7.34 2 1 ALA A 12 ? ? -48.16 92.47 3 1 SER A 122 ? ? 168.32 158.16 4 1 GLU A 126 ? ? -44.80 -16.83 5 1 PRO A 132 ? ? -44.85 159.41 6 1 VAL A 190 ? ? -121.60 -56.74 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 36 ? A LYS 36 2 1 Y 1 A ALA 37 ? A ALA 37 3 1 Y 1 A TYR 38 ? A TYR 38 4 1 Y 1 A ASN 39 ? A ASN 39 5 1 Y 1 A LEU 40 ? A LEU 40 6 1 Y 1 A THR 41 ? A THR 41 7 1 Y 1 A SER 42 ? A SER 42 8 1 Y 1 A VAL 43 ? A VAL 43 9 1 Y 1 A ARG 44 ? A ARG 44 10 1 Y 1 A ASP 45 ? A ASP 45 11 1 Y 1 A PRO 46 ? A PRO 46 12 1 Y 1 A ASN 47 ? A ASN 47 13 1 Y 1 A ALA 192 ? A ALA 192 14 1 Y 1 A LEU 193 ? A LEU 193 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #