HEADER IMMUNE SYSTEM 21-AUG-01 1JTR OBSLTE 27-NOV-02 1JTR 1MWA TITLE 2C/H-2KBM3/DEV8 ALLOGENEIC COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2C T CELL RECEPTOR ALPHA CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: 2C ALPHA CHAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 2C T CELL RECEPTOR BETA CHAIN; COMPND 8 CHAIN: B, D; COMPND 9 SYNONYM: 2C BETA CHAIN; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: H-2KBM3 MHC CLASS I MOLECULE HEAVY CHAIN; COMPND 13 CHAIN: H, I; COMPND 14 SYNONYM: H-2KBM3 HEAVY CHAIN, H-2 CLASS I COMPND 15 HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: MICROGLOBULIN MHC LIGHT CHAIN; COMPND 19 CHAIN: L, M; COMPND 20 SYNONYM: MICROGLOBULIN LIGHT CHAIN; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: DEV8; COMPND 24 CHAIN: P, Q; COMPND 25 FRAGMENT: RESIDUES 54-61; COMPND 26 ENGINEERED: YES; COMPND 27 OTHER_DETAILS: DERIVED FROM NADH-UBIQUINONE OXIDOREDUCTASE COMPND 28 MLRQ SUBUNIT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 5 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: S2; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: METALLOTH. PROMOTER; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 12 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: S2; SOURCE 14 EXPRESSION_SYSTEM_VECTOR_TYPE: METALLOTH. PROMOTER; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 17 ORGANISM_COMMON: MOUSE; SOURCE 18 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 19 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: S2; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: METALLOTH. PROMOTER; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 24 ORGANISM_COMMON: MOUSE; SOURCE 25 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 26 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 27 EXPRESSION_SYSTEM_STRAIN: S2; SOURCE 28 EXPRESSION_SYSTEM_VECTOR_TYPE: METALLOTH. PROMOTER; SOURCE 29 MOL_ID: 5; SOURCE 30 SYNTHETIC: YES; SOURCE 31 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SOURCE 32 PEPTIDE IS NATURALLY FOUND IN MUS MUSCULUS (MOUSE). KEYWDS IG DOMAINS, T CELL RECEPTOR, MHC CLASSI EXPDTA X-RAY DIFFRACTION AUTHOR J.G.LUZ,M.D.HUANG,K.C.GARCIA,M.G.RUDOLPH,L.TEYTON,I.A.WILSON REVDAT 3 01-APR-03 1JTR 1 JRNL REVDAT 2 27-NOV-02 1JTR 1 OBSLTE REVDAT 1 15-MAY-02 1JTR 0 JRNL AUTH J.G.LUZ,M.HUANG,K.C.GARCIA,M.G.RUDOLPH, JRNL AUTH 2 V.APOSTOLOPOULOS,L.TEYTON,I.A.WILSON JRNL TITL STRUCTURAL COMPARISON OF ALLOGENEIC AND SYNGENEIC JRNL TITL 2 T CELL RECEPTOR-PEPTIDE-MAJOR HISTOCOMPATIBILITY JRNL TITL 3 COMPLEX COMPLEXES: A BURIED ALLOREACTIVE MUTATION JRNL TITL 4 SUBTLY ALTERS PEPTIDE PRESENTATION SUBSTANTIALLY JRNL TITL 5 INCREASING V(BETA) INTERACTIONS. JRNL REF J.EXP.MED. V. 195 1175 2002 JRNL REFN ASTM JEMEAV US ISSN 0022-1007 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 90694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.285 REMARK 3 R VALUE (WORKING SET) : 0.283 REMARK 3 FREE R VALUE : 0.312 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4781 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW : 2.50 REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 4781 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 ALL ATOMS : 14001 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.44000 REMARK 3 B22 (A**2) : 3.33000 REMARK 3 B33 (A**2) : -2.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.439 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.298 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.436 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.625 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.885 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.859 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13697 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 11695 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18596 ; 1.637 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 27265 ; 2.381 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1614 ; 2.310 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 2303 ;20.092 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1990 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 15056 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2822 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4279 ; 0.298 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 13859 ; 0.284 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1173 ; 0.513 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1173 ; 0.181 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 38 ; 0.103 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 35 ; 0.400 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 83 ; 0.414 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.314 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 8168 ; 0.706 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 13156 ; 1.316 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5529 ; 1.508 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5438 ; 2.716 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 0 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 0 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS 0.9 WAS ALSO USED FOR REMARK 3 REFINEMENT. THERE ARE MANY CLOSE CONTACTS IN THE CARBOHYDRATE REMARK 3 CHAINS. THE BOND DISTANCES FOR SOME LINK RECORDS ARE LONG (FOR REMARK 3 EXAMPLE, THE BOND BETWEEN NAG 801 AND NAG 802) DUE TO REMARK 3 REFINEMENT ARTIFACTS. REMARK 4 REMARK 4 1JTR COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-2001. REMARK 100 THE RCSB ID CODE IS RCSB014174. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-2000 REMARK 200 TEMPERATURE (KELVIN) : 104.0 REMARK 200 PH : 6.90 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : 9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI (311) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95548 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05200 REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.45300 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1G6R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS ACETATE, 12% PEG4000, 18% REMARK 280 GLYCEROL, PH 6.9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 1/2-X,1/2+Y,-Z REMARK 290 4555 1/2+X,1/2-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 148.94950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.97100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 148.94950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.97100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 10CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, H, L, P, R, S, T, U, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, I, M, Q, W REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG H 275 REMARK 465 ARG I 275 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER I 77 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 O4 NAG T 806 O2 MAN T 807 1.23 REMARK 500 C4 NAG U 810 C1 MAN U 811 1.68 REMARK 500 O4 NAG W 815 O5 MAN W 816 1.83 REMARK 500 O3 NAG T 806 O5 MAN T 807 1.89 REMARK 500 C4 NAG W 814 C1 NAG W 815 1.92 REMARK 500 O4 NAG U 810 O5 MAN U 811 2.01 REMARK 500 ND2 ASN A 185 C2 NAG T 805 2.07 REMARK 500 O4 NAG W 814 C2 NAG W 815 2.10 REMARK 500 O4 NAG W 814 O5 NAG W 815 2.12 REMARK 500 O3 NAG W 814 O5 NAG W 815 2.13 REMARK 500 O4 NAG U 810 C2 MAN U 811 2.15 REMARK 500 ND2 ASN A 70 O5 NAG S 803 2.16 REMARK 500 C4 NAG T 806 O2 MAN T 807 2.16 REMARK 500 ND2 ASN A 185 O5 NAG T 805 2.18 REMARK 500 ND2 ASN H 176 O5 NAG X 812 2.18 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CB SER C 188 O HOH 233 4555 1.98 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 30 CG PRO A 30 CD 0.049 REMARK 500 VAL A 36 CB VAL A 36 CG2 -0.049 REMARK 500 THR A 198 C ASN A 203 N 0.054 REMARK 500 ALA C 8 CA ALA C 8 C -0.063 REMARK 500 ARG C 9 N ARG C 9 CA -0.062 REMARK 500 ARG C 9 CA ARG C 9 C -0.060 REMARK 500 ALA C 8 C ARG C 9 N -0.055 REMARK 500 SER C 93 C GLY C 99 N 0.064 REMARK 500 LYS C 129 C ASP C 132 N 0.067 REMARK 500 THR C 198 C ASN C 203 N 0.060 REMARK 500 GLY B 63 C TYR B 65 N 0.058 REMARK 500 GLY B 98 C THR B 105 N 0.048 REMARK 500 VAL B 116 C LEU B 316 N 0.080 REMARK 500 GLU B 227 CA GLU B 227 C -0.070 REMARK 500 GLY B 228 N GLY B 228 CA -0.065 REMARK 500 GLY D 63 C TYR D 65 N 0.071 REMARK 500 GLY D 98 C THR D 105 N 0.064 REMARK 500 VAL D 116 C LEU D 316 N 0.051 REMARK 500 VAL D 122 N VAL D 122 CA -0.054 REMARK 500 TYR D 187 C SER D 189 N 0.051 REMARK 500 GLY H 1 N GLY H 1 CA 0.049 REMARK 500 PRO H 210 CB PRO H 210 CG -0.051 REMARK 500 GLY I 1 N GLY I 1 CA 0.048 REMARK 500 ASN I 220 CA ASN I 220 C -0.054 REMARK 500 GLY I 221 N GLY I 221 CA -0.046 REMARK 500 GLY I 221 CA GLY I 221 C 0.049 REMARK 500 ASN I 220 C GLY I 221 N -0.096 REMARK 500 MET L 51 SD MET L 51 CE -0.062 REMARK 500 MET L 54 CG MET L 54 SD -0.060 REMARK 500 MET M 51 SD MET M 51 CE -0.051 REMARK 500 VAL Q 8 CB VAL Q 8 CG2 -0.059 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 31 N - CA - C ANGL. DEV. = -8.9 DEGREES REMARK 500 PRO A 39 N - CA - C ANGL. DEV. = 11.5 DEGREES REMARK 500 CYS A 90 N - CA - C ANGL. DEV. =-10.1 DEGREES REMARK 500 THR A 166 N - CA - C ANGL. DEV. = -8.7 DEGREES REMARK 500 ARG C 9 N - CA - C ANGL. DEV. =-11.6 DEGREES REMARK 500 SER B 94 N - CA - C ANGL. DEV. =-10.7 DEGREES REMARK 500 LYS B 126 N - CA - C ANGL. DEV. = -9.9 DEGREES REMARK 500 LEU B 145 N - CA - C ANGL. DEV. = -8.5 DEGREES REMARK 500 GLY B 151 N - CA - C ANGL. DEV. = 11.2 DEGREES REMARK 500 GLY B 165 N - CA - C ANGL. DEV. = 8.7 DEGREES REMARK 500 GLU B 227 C - N - CA ANGL. DEV. = -8.7 DEGREES REMARK 500 GLY B 228 N - CA - C ANGL. DEV. =-17.3 DEGREES REMARK 500 GLU B 227 CA - C - N ANGL. DEV. = -9.8 DEGREES REMARK 500 LEU H 5 N - CA - C ANGL. DEV. = -9.4 DEGREES REMARK 500 ARG H 21 N - CA - C ANGL. DEV. = -8.4 DEGREES REMARK 500 ALA H 49 N - CA - C ANGL. DEV. =-10.3 DEGREES REMARK 500 GLY H 112 N - CA - C ANGL. DEV. = -8.7 DEGREES REMARK 500 GLN H 114 N - CA - C ANGL. DEV. = -9.3 DEGREES REMARK 500 LYS H 186 N - CA - C ANGL. DEV. =-11.3 DEGREES REMARK 500 THR H 233 N - CA - C ANGL. DEV. =-10.2 DEGREES REMARK 500 GLU I 58 N - CA - C ANGL. DEV. =-11.8 DEGREES REMARK 500 LYS I 186 N - CA - C ANGL. DEV. = -8.5 DEGREES REMARK 500 ASN I 220 CA - C - N ANGL. DEV. =-13.4 DEGREES REMARK 500 GLU I 223 N - CA - C ANGL. DEV. = -8.7 DEGREES REMARK 500 ALA I 245 N - CA - C ANGL. DEV. = -9.1 DEGREES REMARK 500 HIS L 31 N - CA - C ANGL. DEV. =-11.1 DEGREES REMARK 500 GLN M 2 N - CA - C ANGL. DEV. =-11.6 DEGREES REMARK 500 TYR Q 6 N - CA - C ANGL. DEV. = -9.5 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR C 50 SER C 51 135.73 REMARK 525 REMARK 525 SOLVENT REMARK 525 THE FOLLOWING SOLVENT MOLECULES LIE FARTHER THAN EXPECTED REMARK 525 FROM THE PROTEIN OR NUCLEIC ACID MOLECULE AND MAY BE REMARK 525 ASSOCIATED WITH A SYMMETRY RELATED MOLECULE (M=MODEL REMARK 525 NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH 108 DISTANCE = 5.76 ANGSTROMS REMARK 525 HOH 366 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH 380 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH 435 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH 647 DISTANCE = 5.44 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE RESIDUE NUMBERING OF CHAINS REMARK 999 A, B, C, AND D IS NOT SEQUENTIAL. REMARK 999 THE SEQUENCE OF PDB ENTRY 1TCR REMARK 999 WAS USED FOR CHAINS A, B, C, AND D. DBREF 1JTR A 1 213 GB 224220 224220 21 222 DBREF 1JTR C 1 213 GB 224220 224220 21 222 DBREF 1JTR B 1 247 GB 1791255 AAB41230 30 268 DBREF 1JTR D 1 247 GB 1791255 AAB41230 30 268 DBREF 1JTR H 1 275 UNP P01901 HA1B_MOUSE 22 296 DBREF 1JTR I 1 275 UNP P01901 HA1B_MOUSE 22 296 DBREF 1JTR L 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 1JTR M 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 1JTR P 1 8 UNP Q62425 NUML_MOUSE 54 61 DBREF 1JTR Q 1 8 UNP Q62425 NUML_MOUSE 54 61 SEQADV 1JTR ALA A 127 GB 224220 GLN 142 SEE REMARK 999 SEQADV 1JTR ALA A 165 GB 224220 LYS 178 SEE REMARK 999 SEQADV 1JTR ALA C 127 GB 224220 GLN 142 SEE REMARK 999 SEQADV 1JTR ALA C 165 GB 224220 LYS 178 SEE REMARK 999 SEQADV 1JTR GLY B 97 GB 1791255 GLN 125 SEE REMARK 999 SEQADV 1JTR B GB 1791255 ARG 127 SEE REMARK 999 SEQADV 1JTR B GB 1791255 ALA 128 SEE REMARK 999 SEQADV 1JTR THR B 105 GB 1791255 GLU 129 SEE REMARK 999 SEQADV 1JTR LEU B 106 GB 1791255 GLN 130 SEE REMARK 999 SEQADV 1JTR TYR B 107 GB 1791255 PHE 131 SEE REMARK 999 SEQADV 1JTR ALA B 110 GB 1791255 PRO 134 SEE REMARK 999 SEQADV 1JTR SER B 115 GB 1791255 THR 139 SEE REMARK 999 SEQADV 1JTR GLY D 97 GB 1791255 GLN 125 SEE REMARK 999 SEQADV 1JTR D GB 1791255 ARG 127 SEE REMARK 999 SEQADV 1JTR D GB 1791255 ALA 128 SEE REMARK 999 SEQADV 1JTR THR D 105 GB 1791255 GLU 129 SEE REMARK 999 SEQADV 1JTR LEU D 106 GB 1791255 GLN 130 SEE REMARK 999 SEQADV 1JTR TYR D 107 GB 1791255 PHE 131 SEE REMARK 999 SEQADV 1JTR ALA D 110 GB 1791255 PRO 134 SEE REMARK 999 SEQADV 1JTR SER D 115 GB 1791255 THR 139 SEE REMARK 999 SEQADV 1JTR SER H 77 UNP P01901 ASP 98 CONFLICT SEQADV 1JTR ALA H 89 UNP P01901 LYS 110 CONFLICT SEQADV 1JTR ARG H 275 UNP P01901 GLU 296 CONFLICT SEQADV 1JTR SER I 77 UNP P01901 ASP 98 CONFLICT SEQADV 1JTR ALA I 89 UNP P01901 LYS 110 CONFLICT SEQADV 1JTR ARG I 275 UNP P01901 GLU 296 CONFLICT SEQRES 1 A 202 GLN SER VAL THR GLN PRO ASP ALA ARG VAL THR VAL SER SEQRES 2 A 202 GLU GLY ALA SER LEU GLN LEU ARG CYS LYS TYR SER TYR SEQRES 3 A 202 SER ALA THR PRO TYR LEU PHE TRP TYR VAL GLN TYR PRO SEQRES 4 A 202 ARG GLN GLY LEU GLN LEU LEU LEU LYS TYR TYR SER GLY SEQRES 5 A 202 ASP PRO VAL VAL GLN GLY VAL ASN GLY PHE GLU ALA GLU SEQRES 6 A 202 PHE SER LYS SER ASN SER SER PHE HIS LEU ARG LYS ALA SEQRES 7 A 202 SER VAL HIS TRP SER ASP SER ALA VAL TYR PHE CYS ALA SEQRES 8 A 202 VAL SER GLY PHE ALA SER ALA LEU THR PHE GLY SER GLY SEQRES 9 A 202 THR LYS VAL ILE VAL LEU PRO TYR ILE GLN ASN PRO GLU SEQRES 10 A 202 PRO ALA VAL TYR ALA LEU LYS ASP PRO ARG SER GLN ASP SEQRES 11 A 202 SER THR LEU CYS LEU PHE THR ASP PHE ASP SER GLN ILE SEQRES 12 A 202 ASN VAL PRO LYS THR MET GLU SER GLY THR PHE ILE THR SEQRES 13 A 202 ASP ALA THR VAL LEU ASP MET LYS ALA MET ASP SER LYS SEQRES 14 A 202 SER ASN GLY ALA ILE ALA TRP SER ASN GLN THR SER PHE SEQRES 15 A 202 THR CYS GLN ASP ILE PHE LYS GLU THR ASN ALA THR TYR SEQRES 16 A 202 PRO SER SER ASP VAL PRO CYS SEQRES 1 C 202 GLN SER VAL THR GLN PRO ASP ALA ARG VAL THR VAL SER SEQRES 2 C 202 GLU GLY ALA SER LEU GLN LEU ARG CYS LYS TYR SER TYR SEQRES 3 C 202 SER ALA THR PRO TYR LEU PHE TRP TYR VAL GLN TYR PRO SEQRES 4 C 202 ARG GLN GLY LEU GLN LEU LEU LEU LYS TYR TYR SER GLY SEQRES 5 C 202 ASP PRO VAL VAL GLN GLY VAL ASN GLY PHE GLU ALA GLU SEQRES 6 C 202 PHE SER LYS SER ASN SER SER PHE HIS LEU ARG LYS ALA SEQRES 7 C 202 SER VAL HIS TRP SER ASP SER ALA VAL TYR PHE CYS ALA SEQRES 8 C 202 VAL SER GLY PHE ALA SER ALA LEU THR PHE GLY SER GLY SEQRES 9 C 202 THR LYS VAL ILE VAL LEU PRO TYR ILE GLN ASN PRO GLU SEQRES 10 C 202 PRO ALA VAL TYR ALA LEU LYS ASP PRO ARG SER GLN ASP SEQRES 11 C 202 SER THR LEU CYS LEU PHE THR ASP PHE ASP SER GLN ILE SEQRES 12 C 202 ASN VAL PRO LYS THR MET GLU SER GLY THR PHE ILE THR SEQRES 13 C 202 ASP ALA THR VAL LEU ASP MET LYS ALA MET ASP SER LYS SEQRES 14 C 202 SER ASN GLY ALA ILE ALA TRP SER ASN GLN THR SER PHE SEQRES 15 C 202 THR CYS GLN ASP ILE PHE LYS GLU THR ASN ALA THR TYR SEQRES 16 C 202 PRO SER SER ASP VAL PRO CYS SEQRES 1 B 237 GLU ALA ALA VAL THR GLN SER PRO ARG ASN LYS VAL ALA SEQRES 2 B 237 VAL THR GLY GLY LYS VAL THR LEU SER CYS ASN GLN THR SEQRES 3 B 237 ASN ASN HIS ASN ASN MET TYR TRP TYR ARG GLN ASP THR SEQRES 4 B 237 GLY HIS GLY LEU ARG LEU ILE HIS TYR SER TYR GLY ALA SEQRES 5 B 237 GLY SER THR GLU LYS GLY ASP ILE PRO ASP GLY TYR LYS SEQRES 6 B 237 ALA SER ARG PRO SER GLN GLU ASN PHE SER LEU ILE LEU SEQRES 7 B 237 GLU LEU ALA THR PRO SER GLN THR SER VAL TYR PHE CYS SEQRES 8 B 237 ALA SER GLY GLY GLY GLY THR LEU TYR PHE GLY ALA GLY SEQRES 9 B 237 THR ARG LEU SER VAL LEU GLU ASP LEU ARG ASN VAL THR SEQRES 10 B 237 PRO PRO LYS VAL SER LEU PHE GLU PRO SER LYS ALA GLU SEQRES 11 B 237 ILE ALA ASN LYS GLN LYS ALA THR LEU VAL CYS LEU ALA SEQRES 12 B 237 ARG GLY PHE PHE PRO ASP HIS VAL GLU LEU SER TRP TRP SEQRES 13 B 237 VAL ASN GLY LYS GLU VAL HIS SER GLY VAL SER THR ASP SEQRES 14 B 237 PRO GLN ALA TYR LYS GLU SER ASN TYR SER TYR CYS LEU SEQRES 15 B 237 SER SER ARG LEU ARG VAL SER ALA THR PHE TRP HIS ASN SEQRES 16 B 237 PRO ARG ASN HIS PHE ARG CYS GLN VAL GLN PHE HIS GLY SEQRES 17 B 237 LEU SER GLU GLU ASP LYS TRP PRO GLU GLY SER PRO LYS SEQRES 18 B 237 PRO VAL THR GLN ASN ILE SER ALA GLU ALA TRP GLY ARG SEQRES 19 B 237 ALA ASP CYS SEQRES 1 D 237 GLU ALA ALA VAL THR GLN SER PRO ARG ASN LYS VAL ALA SEQRES 2 D 237 VAL THR GLY GLY LYS VAL THR LEU SER CYS ASN GLN THR SEQRES 3 D 237 ASN ASN HIS ASN ASN MET TYR TRP TYR ARG GLN ASP THR SEQRES 4 D 237 GLY HIS GLY LEU ARG LEU ILE HIS TYR SER TYR GLY ALA SEQRES 5 D 237 GLY SER THR GLU LYS GLY ASP ILE PRO ASP GLY TYR LYS SEQRES 6 D 237 ALA SER ARG PRO SER GLN GLU ASN PHE SER LEU ILE LEU SEQRES 7 D 237 GLU LEU ALA THR PRO SER GLN THR SER VAL TYR PHE CYS SEQRES 8 D 237 ALA SER GLY GLY GLY GLY THR LEU TYR PHE GLY ALA GLY SEQRES 9 D 237 THR ARG LEU SER VAL LEU GLU ASP LEU ARG ASN VAL THR SEQRES 10 D 237 PRO PRO LYS VAL SER LEU PHE GLU PRO SER LYS ALA GLU SEQRES 11 D 237 ILE ALA ASN LYS GLN LYS ALA THR LEU VAL CYS LEU ALA SEQRES 12 D 237 ARG GLY PHE PHE PRO ASP HIS VAL GLU LEU SER TRP TRP SEQRES 13 D 237 VAL ASN GLY LYS GLU VAL HIS SER GLY VAL SER THR ASP SEQRES 14 D 237 PRO GLN ALA TYR LYS GLU SER ASN TYR SER TYR CYS LEU SEQRES 15 D 237 SER SER ARG LEU ARG VAL SER ALA THR PHE TRP HIS ASN SEQRES 16 D 237 PRO ARG ASN HIS PHE ARG CYS GLN VAL GLN PHE HIS GLY SEQRES 17 D 237 LEU SER GLU GLU ASP LYS TRP PRO GLU GLY SER PRO LYS SEQRES 18 D 237 PRO VAL THR GLN ASN ILE SER ALA GLU ALA TRP GLY ARG SEQRES 19 D 237 ALA ASP CYS SEQRES 1 H 275 GLY PRO HIS SER LEU ARG TYR PHE VAL THR ALA VAL SER SEQRES 2 H 275 ARG PRO GLY LEU GLY GLU PRO ARG TYR MET GLU VAL GLY SEQRES 3 H 275 TYR VAL ASP ASP THR GLU PHE VAL ARG PHE ASP SER ASP SEQRES 4 H 275 ALA GLU ASN PRO ARG TYR GLU PRO ARG ALA ARG TRP MET SEQRES 5 H 275 GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG GLU THR GLN SEQRES 6 H 275 LYS ALA LYS GLY ASN GLU GLN SER PHE ARG VAL SER LEU SEQRES 7 H 275 ARG THR LEU LEU GLY TYR TYR ASN GLN SER ALA GLY GLY SEQRES 8 H 275 SER HIS THR ILE GLN VAL ILE SER GLY CYS GLU VAL GLY SEQRES 9 H 275 SER ASP GLY ARG LEU LEU ARG GLY TYR GLN GLN TYR ALA SEQRES 10 H 275 TYR ASP GLY CYS ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 H 275 LYS THR TRP THR ALA ALA ASP MET ALA ALA LEU ILE THR SEQRES 12 H 275 LYS HIS LYS TRP GLU GLN ALA GLY GLU ALA GLU ARG LEU SEQRES 13 H 275 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 H 275 ARG TYR LEU LYS ASN GLY ASN ALA THR LEU LEU ARG THR SEQRES 15 H 275 ASP SER PRO LYS ALA HIS VAL THR HIS HIS SER ARG PRO SEQRES 16 H 275 GLU ASP LYS VAL THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 H 275 TYR PRO ALA ASP ILE THR LEU THR TRP GLN LEU ASN GLY SEQRES 18 H 275 GLU GLU LEU ILE GLN ASP MET GLU LEU VAL GLU THR ARG SEQRES 19 H 275 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA SER VAL SEQRES 20 H 275 VAL VAL PRO LEU GLY LYS GLU GLN TYR TYR THR CYS HIS SEQRES 21 H 275 VAL TYR HIS GLN GLY LEU PRO GLU PRO LEU THR LEU ARG SEQRES 22 H 275 TRP ARG SEQRES 1 I 275 GLY PRO HIS SER LEU ARG TYR PHE VAL THR ALA VAL SER SEQRES 2 I 275 ARG PRO GLY LEU GLY GLU PRO ARG TYR MET GLU VAL GLY SEQRES 3 I 275 TYR VAL ASP ASP THR GLU PHE VAL ARG PHE ASP SER ASP SEQRES 4 I 275 ALA GLU ASN PRO ARG TYR GLU PRO ARG ALA ARG TRP MET SEQRES 5 I 275 GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG GLU THR GLN SEQRES 6 I 275 LYS ALA LYS GLY ASN GLU GLN SER PHE ARG VAL SER LEU SEQRES 7 I 275 ARG THR LEU LEU GLY TYR TYR ASN GLN SER ALA GLY GLY SEQRES 8 I 275 SER HIS THR ILE GLN VAL ILE SER GLY CYS GLU VAL GLY SEQRES 9 I 275 SER ASP GLY ARG LEU LEU ARG GLY TYR GLN GLN TYR ALA SEQRES 10 I 275 TYR ASP GLY CYS ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 I 275 LYS THR TRP THR ALA ALA ASP MET ALA ALA LEU ILE THR SEQRES 12 I 275 LYS HIS LYS TRP GLU GLN ALA GLY GLU ALA GLU ARG LEU SEQRES 13 I 275 ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU ARG SEQRES 14 I 275 ARG TYR LEU LYS ASN GLY ASN ALA THR LEU LEU ARG THR SEQRES 15 I 275 ASP SER PRO LYS ALA HIS VAL THR HIS HIS SER ARG PRO SEQRES 16 I 275 GLU ASP LYS VAL THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 I 275 TYR PRO ALA ASP ILE THR LEU THR TRP GLN LEU ASN GLY SEQRES 18 I 275 GLU GLU LEU ILE GLN ASP MET GLU LEU VAL GLU THR ARG SEQRES 19 I 275 PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA SER VAL SEQRES 20 I 275 VAL VAL PRO LEU GLY LYS GLU GLN TYR TYR THR CYS HIS SEQRES 21 I 275 VAL TYR HIS GLN GLY LEU PRO GLU PRO LEU THR LEU ARG SEQRES 22 I 275 TRP ARG SEQRES 1 L 99 ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG HIS SEQRES 2 L 99 PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS TYR SEQRES 3 L 99 VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN MET SEQRES 4 L 99 LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SER SEQRES 5 L 99 ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE LEU SEQRES 6 L 99 ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR TYR SEQRES 7 L 99 ALA CYS ARG VAL LYS HIS ASP SER MET ALA GLU PRO LYS SEQRES 8 L 99 THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 M 99 ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG HIS SEQRES 2 M 99 PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS TYR SEQRES 3 M 99 VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN MET SEQRES 4 M 99 LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SER SEQRES 5 M 99 ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE LEU SEQRES 6 M 99 ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR TYR SEQRES 7 M 99 ALA CYS ARG VAL LYS HIS ASP SER MET ALA GLU PRO LYS SEQRES 8 M 99 THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 P 8 GLU GLN TYR LYS PHE TYR SER VAL SEQRES 1 Q 8 GLU GLN TYR LYS PHE TYR SER VAL MODRES 1JTR ASN A 60 ASN GLYCOSYLATION SITE MODRES 1JTR ASN A 70 ASN GLYCOSYLATION SITE MODRES 1JTR ASN C 70 ASN GLYCOSYLATION SITE MODRES 1JTR ASN B 24 ASN GLYCOSYLATION SITE MODRES 1JTR ASN H 176 ASN GLYCOSYLATION SITE MODRES 1JTR ASN A 185 ASN GLYCOSYLATION SITE MODRES 1JTR ASN B 236 ASN GLYCOSYLATION SITE HET NAG R 801 14 HET NAG R 802 14 HET NAG S 803 14 HET NAG S 804 14 HET NAG T 805 14 HET NAG T 806 14 HET MAN T 807 11 HET NAG B 808 14 HET NAG U 809 14 HET NAG U 810 14 HET MAN U 811 11 HET NAG X 812 14 HET NAG X 813 14 HET NAG W 814 14 HET NAG W 815 14 HET MAN W 816 11 HET GOL 901 6 HET GOL 902 6 HET GOL 903 6 HET ACY 1001 4 HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM MAN ALPHA-D-MANNOSE HETNAM GOL GLYCEROL HETNAM ACY ACETIC ACID HETSYN NAG NAG FORMUL 11 NAG 13(C8 H15 N O6) FORMUL 15 MAN 3(C6 H12 O6) FORMUL 21 GOL 3(C3 H8 O3) FORMUL 24 ACY C2 H4 O2 FORMUL 25 HOH *675(H2 O1) HELIX 1 1 HIS A 81 SER A 85 5 5 HELIX 2 2 THR A 190 PHE A 195 1 6 HELIX 3 3 HIS C 81 SER C 85 5 5 HELIX 4 4 THR B 83 THR B 87 5 5 HELIX 5 5 SER B 133 GLN B 141 1 9 HELIX 6 6 ALA B 200 ASN B 205 1 6 HELIX 7 7 THR D 83 THR D 87 5 5 HELIX 8 8 SER D 199 HIS D 204 1 6 HELIX 9 9 ALA H 49 GLU H 55 5 7 HELIX 10 10 GLY H 56 TYR H 85 1 30 HELIX 11 11 ASP H 137 ALA H 150 1 14 HELIX 12 12 GLY H 151 GLY H 162 1 12 HELIX 13 13 GLY H 162 LEU H 180 1 19 HELIX 14 14 ALA I 49 GLN I 54 5 6 HELIX 15 15 GLU I 58 TYR I 85 1 28 HELIX 16 16 ALA I 140 LYS I 146 1 7 HELIX 17 17 GLY I 151 ALA I 153 5 3 HELIX 18 18 GLU I 154 GLY I 162 1 9 HELIX 19 19 GLY I 162 LEU I 180 1 19 HELIX 20 20 LYS I 253 GLN I 255 5 3 SHEET 1 A 2 SER A 2 THR A 4 0 SHEET 2 A 2 LYS A 23 SER A 25 -1 O LYS A 23 N THR A 4 SHEET 1 B 4 LEU A 43 TYR A 49 0 SHEET 2 B 4 TYR A 31 GLN A 37 -1 N TRP A 34 O LEU A 46 SHEET 3 B 4 ALA A 86 SER A 93 -1 O SER A 93 N TYR A 31 SHEET 4 B 4 THR A 105 PHE A 106 -1 O THR A 105 N VAL A 92 SHEET 1 C 5 LEU A 43 TYR A 49 0 SHEET 2 C 5 TYR A 31 GLN A 37 -1 N TRP A 34 O LEU A 46 SHEET 3 C 5 ALA A 86 SER A 93 -1 O SER A 93 N TYR A 31 SHEET 4 C 5 THR A 110 LEU A 115 -1 O VAL A 112 N ALA A 86 SHEET 5 C 5 ARG A 9 SER A 13 1 N VAL A 10 O ILE A 113 SHEET 1 D 4 LEU A 18 LEU A 20 0 SHEET 2 D 4 SER A 72 LYS A 77 -1 O LEU A 75 N LEU A 20 SHEET 3 D 4 GLU A 63 SER A 67 -1 N GLU A 63 O ARG A 76 SHEET 4 D 4 VAL A 55 GLN A 57 -1 N VAL A 56 O ALA A 64 SHEET 1 E 4 THR A 166 ASP A 169 0 SHEET 2 E 4 LYS A 176 SER A 184 -1 O SER A 177 N LEU A 168 SHEET 3 E 4 CYS A 141 THR A 144 -1 N PHE A 143 O ALA A 180 SHEET 4 E 4 ALA A 124 ALA A 127 -1 N TYR A 126 O LEU A 142 SHEET 1 F 3 THR A 166 ASP A 169 0 SHEET 2 F 3 LYS A 176 SER A 184 -1 O SER A 177 N LEU A 168 SHEET 3 F 3 THR A 160 ILE A 162 -1 N PHE A 161 O TRP A 183 SHEET 1 G 2 VAL C 3 THR C 4 0 SHEET 2 G 2 LYS C 23 TYR C 24 -1 O LYS C 23 N THR C 4 SHEET 1 H 4 GLN C 44 LYS C 48 0 SHEET 2 H 4 TYR C 31 GLN C 37 -1 N TRP C 34 O LEU C 46 SHEET 3 H 4 ALA C 86 SER C 93 -1 O PHE C 89 N TYR C 35 SHEET 4 H 4 THR C 105 PHE C 106 -1 O THR C 105 N VAL C 92 SHEET 1 I 5 GLN C 44 LYS C 48 0 SHEET 2 I 5 TYR C 31 GLN C 37 -1 N TRP C 34 O LEU C 46 SHEET 3 I 5 ALA C 86 SER C 93 -1 O PHE C 89 N TYR C 35 SHEET 4 I 5 LYS C 111 LEU C 115 -1 O VAL C 112 N ALA C 86 SHEET 5 I 5 VAL C 10 SER C 13 1 N VAL C 10 O LYS C 111 SHEET 1 J 3 LEU C 18 LEU C 20 0 SHEET 2 J 3 LEU C 75 LYS C 77 -1 O LEU C 75 N LEU C 20 SHEET 3 J 3 PHE C 62 ALA C 64 -1 N GLU C 63 O ARG C 76 SHEET 1 K 2 THR C 166 LEU C 168 0 SHEET 2 K 2 SER C 177 GLY C 179 -1 O SER C 177 N LEU C 168 SHEET 1 L 4 VAL B 4 SER B 7 0 SHEET 2 L 4 VAL B 19 GLN B 25 -1 O ASN B 24 N THR B 5 SHEET 3 L 4 ASN B 74 LEU B 79 -1 O LEU B 79 N VAL B 19 SHEET 4 L 4 LYS B 66 SER B 71 -1 N LYS B 66 O ILE B 78 SHEET 1 M 5 GLU B 56 LYS B 57 0 SHEET 2 M 5 LEU B 43 SER B 49 -1 N TYR B 48 O GLU B 56 SHEET 3 M 5 ASN B 31 GLN B 37 -1 N TRP B 34 O ILE B 46 SHEET 4 M 5 SER B 88 GLY B 95 -1 O PHE B 91 N TYR B 35 SHEET 5 M 5 LEU B 106 PHE B 108 -1 O TYR B 107 N SER B 94 SHEET 1 N 6 GLU B 56 LYS B 57 0 SHEET 2 N 6 LEU B 43 SER B 49 -1 N TYR B 48 O GLU B 56 SHEET 3 N 6 ASN B 31 GLN B 37 -1 N TRP B 34 O ILE B 46 SHEET 4 N 6 SER B 88 GLY B 95 -1 O PHE B 91 N TYR B 35 SHEET 5 N 6 THR B 112 LEU B 316 -1 O LEU B 114 N SER B 88 SHEET 6 N 6 ASN B 10 VAL B 14 1 N LYS B 11 O SER B 115 SHEET 1 O 4 LYS B 126 PHE B 130 0 SHEET 2 O 4 LYS B 142 PHE B 152 -1 O ARG B 150 N LYS B 126 SHEET 3 O 4 TYR B 190 SER B 199 -1 O LEU B 192 N ALA B 149 SHEET 4 O 4 VAL B 172 THR B 174 -1 N SER B 173 O ARG B 195 SHEET 1 P 4 LYS B 126 PHE B 130 0 SHEET 2 P 4 LYS B 142 PHE B 152 -1 O ARG B 150 N LYS B 126 SHEET 3 P 4 TYR B 190 SER B 199 -1 O LEU B 192 N ALA B 149 SHEET 4 P 4 TYR B 179 LYS B 180 -1 N TYR B 179 O CYS B 191 SHEET 1 Q 4 LYS B 166 GLU B 167 0 SHEET 2 Q 4 VAL B 157 VAL B 163 -1 N VAL B 163 O LYS B 166 SHEET 3 Q 4 HIS B 209 PHE B 216 -1 O ARG B 211 N TRP B 162 SHEET 4 Q 4 GLN B 235 TRP B 242 -1 O GLN B 235 N PHE B 216 SHEET 1 R 4 VAL D 4 SER D 7 0 SHEET 2 R 4 VAL D 19 GLN D 25 -1 O ASN D 24 N THR D 5 SHEET 3 R 4 ASN D 74 LEU D 79 -1 O LEU D 79 N VAL D 19 SHEET 4 R 4 LYS D 66 SER D 71 -1 N LYS D 66 O ILE D 78 SHEET 1 S 5 GLU D 56 LYS D 57 0 SHEET 2 S 5 LEU D 43 SER D 49 -1 N TYR D 48 O GLU D 56 SHEET 3 S 5 ASN D 31 GLN D 37 -1 N TRP D 34 O ILE D 46 SHEET 4 S 5 SER D 88 GLY D 95 -1 O PHE D 91 N TYR D 35 SHEET 5 S 5 LEU D 106 PHE D 108 -1 O TYR D 107 N SER D 94 SHEET 1 T 6 GLU D 56 LYS D 57 0 SHEET 2 T 6 LEU D 43 SER D 49 -1 N TYR D 48 O GLU D 56 SHEET 3 T 6 ASN D 31 GLN D 37 -1 N TRP D 34 O ILE D 46 SHEET 4 T 6 SER D 88 GLY D 95 -1 O PHE D 91 N TYR D 35 SHEET 5 T 6 THR D 112 LEU D 316 -1 O LEU D 114 N SER D 88 SHEET 6 T 6 ASN D 10 VAL D 14 1 N LYS D 11 O SER D 115 SHEET 1 U 4 LYS D 126 PHE D 130 0 SHEET 2 U 4 LYS D 142 PHE D 152 -1 O ARG D 150 N LYS D 126 SHEET 3 U 4 TYR D 190 SER D 199 -1 O LEU D 192 N ALA D 149 SHEET 4 U 4 VAL D 172 THR D 174 -1 N SER D 173 O ARG D 195 SHEET 1 V 4 LYS D 126 PHE D 130 0 SHEET 2 V 4 LYS D 142 PHE D 152 -1 O ARG D 150 N LYS D 126 SHEET 3 V 4 TYR D 190 SER D 199 -1 O LEU D 192 N ALA D 149 SHEET 4 V 4 TYR D 179 LYS D 180 -1 N TYR D 179 O CYS D 191 SHEET 1 W 4 LYS D 166 GLU D 167 0 SHEET 2 W 4 VAL D 157 VAL D 163 -1 N VAL D 163 O LYS D 166 SHEET 3 W 4 HIS D 209 PHE D 216 -1 O ARG D 211 N TRP D 162 SHEET 4 W 4 GLN D 235 TRP D 242 -1 O GLN D 235 N PHE D 216 SHEET 1 X 7 GLU H 46 PRO H 47 0 SHEET 2 X 7 THR H 31 ASP H 37 -1 N ARG H 35 O GLU H 46 SHEET 3 X 7 GLY H 18 VAL H 28 -1 N VAL H 28 O THR H 31 SHEET 4 X 7 HIS H 3 ARG H 14 -1 N PHE H 8 O VAL H 25 SHEET 5 X 7 THR H 94 VAL H 103 -1 O VAL H 97 N VAL H 9 SHEET 6 X 7 LEU H 109 TYR H 118 -1 O ARG H 111 N GLU H 102 SHEET 7 X 7 CYS H 121 ALA H 125 -1 O CYS H 121 N TYR H 118 SHEET 1 Y 4 LYS H 186 SER H 193 0 SHEET 2 Y 4 LYS H 198 PHE H 208 -1 O TRP H 204 N HIS H 188 SHEET 3 Y 4 PHE H 241 PRO H 250 -1 O ALA H 245 N CYS H 203 SHEET 4 Y 4 GLU H 229 LEU H 230 -1 N GLU H 229 O SER H 246 SHEET 1 Z 4 LYS H 186 SER H 193 0 SHEET 2 Z 4 LYS H 198 PHE H 208 -1 O TRP H 204 N HIS H 188 SHEET 3 Z 4 PHE H 241 PRO H 250 -1 O ALA H 245 N CYS H 203 SHEET 4 Z 4 ARG H 234 PRO H 235 -1 N ARG H 234 O GLN H 242 SHEET 1 AA 4 GLU H 222 GLU H 223 0 SHEET 2 AA 4 LEU H 215 LEU H 219 -1 N LEU H 219 O GLU H 222 SHEET 3 AA 4 TYR H 257 VAL H 261 -1 O THR H 258 N GLN H 218 SHEET 4 AA 4 LEU H 270 ARG H 273 -1 O LEU H 272 N CYS H 259 SHEET 1 AB 7 GLU I 46 PRO I 47 0 SHEET 2 AB 7 THR I 31 ASP I 37 -1 N ARG I 35 O GLU I 46 SHEET 3 AB 7 GLY I 18 VAL I 28 -1 N GLU I 24 O PHE I 36 SHEET 4 AB 7 HIS I 3 ARG I 14 -1 N ARG I 6 O TYR I 27 SHEET 5 AB 7 ILE I 95 VAL I 103 -1 O SER I 99 N TYR I 7 SHEET 6 AB 7 ARG I 111 TYR I 118 -1 O ALA I 117 N GLN I 96 SHEET 7 AB 7 CYS I 121 ASP I 122 -1 O CYS I 121 N TYR I 118 SHEET 1 AC 2 ALA I 125 LEU I 126 0 SHEET 2 AC 2 TRP I 133 THR I 134 -1 O THR I 134 N ALA I 125 SHEET 1 AD 4 LYS I 186 ARG I 194 0 SHEET 2 AD 4 LYS I 198 PHE I 208 -1 O TRP I 204 N HIS I 188 SHEET 3 AD 4 PHE I 241 PRO I 250 -1 O ALA I 245 N CYS I 203 SHEET 4 AD 4 MET I 228 LEU I 230 -1 N GLU I 229 O SER I 246 SHEET 1 AE 4 LYS I 186 ARG I 194 0 SHEET 2 AE 4 LYS I 198 PHE I 208 -1 O TRP I 204 N HIS I 188 SHEET 3 AE 4 PHE I 241 PRO I 250 -1 O ALA I 245 N CYS I 203 SHEET 4 AE 4 ARG I 234 PRO I 235 -1 N ARG I 234 O GLN I 242 SHEET 1 AF 3 THR I 214 LEU I 219 0 SHEET 2 AF 3 TYR I 257 TYR I 262 -1 O TYR I 262 N THR I 214 SHEET 3 AF 3 LEU I 270 ARG I 273 -1 O LEU I 272 N CYS I 259 SHEET 1 AG 4 GLN L 6 SER L 11 0 SHEET 2 AG 4 ASN L 21 PHE L 30 -1 O ASN L 24 N TYR L 10 SHEET 3 AG 4 PHE L 62 PHE L 70 -1 O PHE L 70 N ASN L 21 SHEET 4 AG 4 GLU L 50 MET L 51 -1 N GLU L 50 O HIS L 67 SHEET 1 AH 4 GLN L 6 SER L 11 0 SHEET 2 AH 4 ASN L 21 PHE L 30 -1 O ASN L 24 N TYR L 10 SHEET 3 AH 4 PHE L 62 PHE L 70 -1 O PHE L 70 N ASN L 21 SHEET 4 AH 4 SER L 55 PHE L 56 -1 N SER L 55 O TYR L 63 SHEET 1 AI 4 LYS L 44 LYS L 45 0 SHEET 2 AI 4 GLU L 36 LYS L 41 -1 N LYS L 41 O LYS L 44 SHEET 3 AI 4 TYR L 78 LYS L 83 -1 O ARG L 81 N GLN L 38 SHEET 4 AI 4 LYS L 91 TYR L 94 -1 O LYS L 91 N VAL L 82 SHEET 1 AJ 4 GLN M 6 TYR M 10 0 SHEET 2 AJ 4 ASN M 21 PHE M 30 -1 O TYR M 26 N GLN M 8 SHEET 3 AJ 4 PHE M 62 PHE M 70 -1 O PHE M 70 N ASN M 21 SHEET 4 AJ 4 SER M 55 PHE M 56 -1 N SER M 55 O TYR M 63 SHEET 1 AK 3 GLU M 36 MET M 39 0 SHEET 2 AK 3 ALA M 79 HIS M 84 -1 O ARG M 81 N GLN M 38 SHEET 3 AK 3 MET M 87 TYR M 94 -1 O MET M 87 N HIS M 84 SSBOND 1 CYS A 22 CYS A 90 SSBOND 2 CYS A 141 CYS A 191 SSBOND 3 CYS C 22 CYS C 90 SSBOND 4 CYS C 141 CYS C 191 SSBOND 5 CYS B 23 CYS B 92 SSBOND 6 CYS B 147 CYS B 212 SSBOND 7 CYS D 23 CYS D 92 SSBOND 8 CYS D 147 CYS D 212 SSBOND 9 CYS H 101 CYS H 164 SSBOND 10 CYS H 203 CYS H 259 SSBOND 11 CYS I 101 CYS I 164 SSBOND 12 CYS I 203 CYS I 259 SSBOND 13 CYS L 25 CYS L 80 SSBOND 14 CYS M 25 CYS M 80 LINK ND2 ASN A 70 C1 NAG S 803 LINK ND2 ASN C 70 C1 NAG W 814 LINK ND2 ASN B 24 C1 NAG B 808 LINK O4 NAG S 803 C1 NAG S 804 LINK O4 NAG T 805 C1 NAG T 806 LINK O4 NAG T 806 C1 MAN T 807 LINK O4 NAG U 809 C1 NAG U 810 LINK O4 NAG U 810 C1 MAN U 811 LINK O4 NAG W 814 C1 NAG W 815 LINK O4 NAG W 815 C1 MAN W 816 LINK ND2 ASN A 185 C1 NAG T 805 LINK ND2 ASN B 236 C1 NAG U 809 LINK ND2 ASN A 60 C1 NAG R 801 LINK ND2 ASN H 176 C1 NAG X 812 LINK O4 NAG X 812 C1 NAG X 813 LINK O4 NAG R 801 C1 NAG R 802 LINK O4 NAG T 806 C2 MAN T 807 CISPEP 1 SER B 7 PRO B 8 0 -1.92 CISPEP 2 SER D 7 PRO D 8 0 -2.15 CISPEP 3 TYR H 209 PRO H 210 0 -3.21 CISPEP 4 TYR I 209 PRO I 210 0 -1.27 CISPEP 5 HIS L 31 PRO L 32 0 4.17 CISPEP 6 HIS M 31 PRO M 32 0 -1.93 CRYST1 297.899 95.942 84.735 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003357 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010423 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011801 0.00000