data_1JUR # _entry.id 1JUR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1JUR pdb_00001jur 10.2210/pdb1jur/pdb RCSB RCSB014205 ? ? WWPDB D_1000014205 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1JUR _pdbx_database_status.recvd_initial_deposition_date 2001-08-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Huber, P.W.' 1 'Rife, J.P.' 2 'Moore, P.B.' 3 # _citation.id primary _citation.title 'The structure of helix III in Xenopus oocyte 5 S rRNA: an RNA stem containing a two-nucleotide bulge.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 312 _citation.page_first 823 _citation.page_last 832 _citation.year 2001 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11575935 _citation.pdbx_database_id_DOI 10.1006/jmbi.2001.4966 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huber, P.W.' 1 ? primary 'Rife, J.P.' 2 ? primary 'Moore, P.B.' 3 ? # _cell.entry_id 1JUR _cell.length_a ? _cell.length_b ? _cell.length_c ? _cell.angle_alpha ? _cell.angle_beta ? _cell.angle_gamma ? _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description "5'-R(*GP*GP*CP*CP*UP*GP*AP*GP*GP*AP*GP*AP*CP*UP*CP*AP*GP*AP*AP*GP*CP*C)-3'" _entity.formula_weight 7135.346 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'Helix III domain of Xenopus Oocyte 5 S rRNA' # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGCCUGAGGAGACUCAGAAGCC _entity_poly.pdbx_seq_one_letter_code_can GGCCUGAGGAGACUCAGAAGCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 C n 1 5 U n 1 6 G n 1 7 A n 1 8 G n 1 9 G n 1 10 A n 1 11 G n 1 12 A n 1 13 C n 1 14 U n 1 15 C n 1 16 A n 1 17 G n 1 18 A n 1 19 A n 1 20 G n 1 21 C n 1 22 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The stem of this hairpin occurs naturally in Xenopus Oocytes.' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1JUR _struct_ref.pdbx_db_accession 1JUR _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1JUR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1JUR _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 2 2 '2D NOESY' 3 2 2 DQF-COSY 4 2 2 2D_13C_separated_HMQC 5 2 2 2D_31P_separated_COSY # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 10 ambient 6.5 '100 mM KCl' ? K 2 30 ambient 6.5 '100 mM KCl' ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 ;2mM Helix III hairpin; 5mM Cacodylate buffer (pH 6.5); 100 mM KCl ; '90% H2O/10% D2O' 2 ;2mM Helix III hairpin; 5mM Cacodylate buffer (pH 6.5); 100 mM KCl ; '100% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Varian UNITY 500 2 ? Varian UNITYPLUS 600 3 ? Varian INOVA 800 4 ? GE OMEGA 500 # _pdbx_nmr_refine.entry_id 1JUR _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ;In addition to the experimentally derived distance constraints and dihedral angle constraints, the structures were computed using 22 non-experimental constraints to ensure Watson-Crick Base pairing and tetraloop formation. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1JUR _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1JUR _pdbx_nmr_ensemble.conformers_calculated_total_number 30 _pdbx_nmr_ensemble.conformers_submitted_total_number 9 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1JUR _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal VNMR ? collection Varian 1 Felix 95 processing Biosym 2 X-PLOR 3.851 'structure solution' Brunger 3 X-PLOR 3.851 refinement Brunger 4 # _exptl.entry_id 1JUR _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1JUR _struct.title 'Solution Structure of Helix III in Xenopus Oocyte 5S rRNA.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1JUR _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA, 5 S rRNA, bulge' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 22 N3 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 22 O2 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 22 N4 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 21 N3 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 21 O2 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 21 N4 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 20 N1 ? ? A C 3 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 20 O6 ? ? A C 3 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 20 N2 ? ? A C 3 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 17 N1 ? ? A C 4 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 17 O6 ? ? A C 4 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 17 N2 ? ? A C 4 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 4 O2 ? ? ? 1_555 A A 19 N6 ? ? A C 4 A A 19 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog14 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 16 N1 ? ? A U 5 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 16 N6 ? ? A U 5 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 15 N3 ? ? A G 6 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 15 O2 ? ? A G 6 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 15 N4 ? ? A G 6 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 14 N3 ? ? A A 7 A U 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 14 O4 ? ? A A 7 A U 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 13 N3 ? ? A G 8 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 13 O2 ? ? A G 8 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 13 N4 ? ? A G 8 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N3 ? ? ? 1_555 A A 12 N6 ? ? A G 9 A A 12 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1JUR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1JUR _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 C 4 4 4 C C A . n A 1 5 U 5 5 5 U U A . n A 1 6 G 6 6 6 G G A . n A 1 7 A 7 7 7 A A A . n A 1 8 G 8 8 8 G G A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 A 12 12 12 A A A . n A 1 13 C 13 13 13 C C A . n A 1 14 U 14 14 14 U U A . n A 1 15 C 15 15 15 C C A . n A 1 16 A 16 16 16 A A A . n A 1 17 G 17 17 17 G G A . n A 1 18 A 18 18 18 A A A . n A 1 19 A 19 19 19 A A A . n A 1 20 G 20 20 20 G G A . n A 1 21 C 21 21 21 C C A . n A 1 22 C 22 22 22 C C A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-01-16 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C8 A A 16 ? ? N9 A A 16 ? ? 1.317 1.373 -0.056 0.008 N 2 2 C8 A A 16 ? ? N9 A A 16 ? ? 1.318 1.373 -0.055 0.008 N 3 3 C8 A A 16 ? ? N9 A A 16 ? ? 1.317 1.373 -0.056 0.008 N 4 4 C8 A A 16 ? ? N9 A A 16 ? ? 1.318 1.373 -0.055 0.008 N 5 5 C8 A A 16 ? ? N9 A A 16 ? ? 1.316 1.373 -0.057 0.008 N 6 6 C8 A A 16 ? ? N9 A A 16 ? ? 1.317 1.373 -0.056 0.008 N 7 7 C8 A A 16 ? ? N9 A A 16 ? ? 1.319 1.373 -0.054 0.008 N 8 8 C8 A A 16 ? ? N9 A A 16 ? ? 1.318 1.373 -0.055 0.008 N 9 9 C8 A A 16 ? ? N9 A A 16 ? ? 1.322 1.373 -0.051 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 91.81 101.30 -9.49 0.70 N 2 1 N9 A A 12 ? ? "C1'" A A 12 ? ? "C2'" A A 12 ? ? 121.85 114.00 7.85 1.30 N 3 1 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.70 108.50 7.20 0.70 N 4 1 "C3'" A A 18 ? ? "O3'" A A 18 ? ? P A A 19 ? ? 128.86 119.70 9.16 1.20 Y 5 1 "O4'" A A 19 ? ? "C1'" A A 19 ? ? N9 A A 19 ? ? 113.18 108.50 4.68 0.70 N 6 2 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 92.00 101.30 -9.30 0.70 N 7 2 C6 A C 13 ? ? N1 A C 13 ? ? C2 A C 13 ? ? 116.89 120.30 -3.41 0.40 N 8 2 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.93 108.50 8.43 0.70 N 9 2 "C5'" A G 17 ? ? "C4'" A G 17 ? ? "O4'" A G 17 ? ? 116.25 109.80 6.45 0.90 N 10 3 "C2'" A C 3 ? ? "C3'" A C 3 ? ? "O3'" A C 3 ? ? 124.60 113.70 10.90 1.60 N 11 3 "C2'" A A 12 ? ? "C3'" A A 12 ? ? "O3'" A A 12 ? ? 124.56 113.70 10.86 1.60 N 12 3 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 92.33 101.30 -8.97 0.70 N 13 3 N9 A A 12 ? ? "C1'" A A 12 ? ? "C2'" A A 12 ? ? 122.71 114.00 8.71 1.30 N 14 3 C6 A C 13 ? ? N1 A C 13 ? ? C2 A C 13 ? ? 117.24 120.30 -3.06 0.40 N 15 3 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.49 108.50 7.99 0.70 N 16 3 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 112.77 108.50 4.27 0.70 N 17 4 "C2'" A A 10 ? ? "C3'" A A 10 ? ? "O3'" A A 10 ? ? 123.49 113.70 9.79 1.60 N 18 4 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 91.93 101.30 -9.37 0.70 N 19 4 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.65 108.50 8.15 0.70 N 20 5 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 92.30 101.30 -9.00 0.70 N 21 5 N9 A A 12 ? ? "C1'" A A 12 ? ? "C2'" A A 12 ? ? 121.86 114.00 7.86 1.30 N 22 5 C6 A C 13 ? ? N1 A C 13 ? ? C2 A C 13 ? ? 117.77 120.30 -2.53 0.40 N 23 5 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.42 108.50 6.92 0.70 N 24 5 N7 A A 16 ? ? C8 A A 16 ? ? N9 A A 16 ? ? 116.82 113.80 3.02 0.50 N 25 5 "O4'" A A 18 ? ? "C1'" A A 18 ? ? N9 A A 18 ? ? 113.93 108.50 5.43 0.70 N 26 5 "O4'" A A 19 ? ? "C1'" A A 19 ? ? N9 A A 19 ? ? 113.31 108.50 4.81 0.70 N 27 6 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 113.06 108.50 4.56 0.70 N 28 6 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 91.83 101.30 -9.47 0.70 N 29 6 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 112.97 108.50 4.47 0.70 N 30 6 C6 A C 13 ? ? N1 A C 13 ? ? C2 A C 13 ? ? 117.19 120.30 -3.11 0.40 N 31 6 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.65 108.50 7.15 0.70 N 32 6 N7 A A 16 ? ? C8 A A 16 ? ? N9 A A 16 ? ? 116.90 113.80 3.10 0.50 N 33 7 "C2'" A A 12 ? ? "C3'" A A 12 ? ? "O3'" A A 12 ? ? 123.43 113.70 9.73 1.60 N 34 7 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 92.36 101.30 -8.94 0.70 N 35 7 C6 A C 13 ? ? N1 A C 13 ? ? C2 A C 13 ? ? 117.17 120.30 -3.13 0.40 N 36 7 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.34 108.50 7.84 0.70 N 37 8 "C1'" A G 1 ? ? "O4'" A G 1 ? ? "C4'" A G 1 ? ? 105.07 109.70 -4.63 0.70 N 38 8 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 113.99 108.50 5.49 0.70 N 39 8 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 93.10 101.30 -8.20 0.70 N 40 8 N9 A A 12 ? ? "C1'" A A 12 ? ? "C2'" A A 12 ? ? 122.00 114.00 8.00 1.30 N 41 8 C6 A C 13 ? ? N1 A C 13 ? ? C2 A C 13 ? ? 116.65 120.30 -3.65 0.40 N 42 8 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.92 108.50 8.42 0.70 N 43 8 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 113.94 108.50 5.44 0.70 N 44 9 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 113.71 108.50 5.21 0.70 N 45 9 C6 A C 4 ? ? N1 A C 4 ? ? C2 A C 4 ? ? 117.76 120.30 -2.54 0.40 N 46 9 "C2'" A A 12 ? ? "C3'" A A 12 ? ? "O3'" A A 12 ? ? 123.43 113.70 9.73 1.60 N 47 9 "C3'" A A 12 ? ? "C2'" A A 12 ? ? "C1'" A A 12 ? ? 92.92 101.30 -8.38 0.70 N 48 9 C8 A A 12 ? ? N9 A A 12 ? ? C4 A A 12 ? ? 103.03 105.80 -2.77 0.40 N 49 9 "O4'" A U 14 ? ? "C1'" A U 14 ? ? N1 A U 14 ? ? 112.90 108.50 4.40 0.70 N 50 9 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.80 108.50 7.30 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G A 1 ? ? 0.077 'SIDE CHAIN' 2 1 C A 3 ? ? 0.071 'SIDE CHAIN' 3 1 G A 8 ? ? 0.064 'SIDE CHAIN' 4 1 G A 9 ? ? 0.101 'SIDE CHAIN' 5 1 A A 10 ? ? 0.085 'SIDE CHAIN' 6 1 G A 11 ? ? 0.068 'SIDE CHAIN' 7 1 A A 12 ? ? 0.125 'SIDE CHAIN' 8 1 C A 13 ? ? 0.120 'SIDE CHAIN' 9 1 G A 17 ? ? 0.092 'SIDE CHAIN' 10 1 A A 18 ? ? 0.091 'SIDE CHAIN' 11 1 G A 20 ? ? 0.095 'SIDE CHAIN' 12 1 C A 22 ? ? 0.060 'SIDE CHAIN' 13 2 G A 1 ? ? 0.080 'SIDE CHAIN' 14 2 G A 9 ? ? 0.069 'SIDE CHAIN' 15 2 A A 10 ? ? 0.082 'SIDE CHAIN' 16 2 G A 11 ? ? 0.065 'SIDE CHAIN' 17 2 A A 12 ? ? 0.097 'SIDE CHAIN' 18 2 C A 13 ? ? 0.148 'SIDE CHAIN' 19 2 G A 17 ? ? 0.083 'SIDE CHAIN' 20 2 A A 19 ? ? 0.087 'SIDE CHAIN' 21 2 G A 20 ? ? 0.100 'SIDE CHAIN' 22 3 C A 3 ? ? 0.084 'SIDE CHAIN' 23 3 A A 7 ? ? 0.076 'SIDE CHAIN' 24 3 G A 8 ? ? 0.091 'SIDE CHAIN' 25 3 G A 9 ? ? 0.082 'SIDE CHAIN' 26 3 A A 10 ? ? 0.067 'SIDE CHAIN' 27 3 A A 12 ? ? 0.120 'SIDE CHAIN' 28 3 C A 13 ? ? 0.191 'SIDE CHAIN' 29 3 G A 17 ? ? 0.090 'SIDE CHAIN' 30 3 A A 18 ? ? 0.110 'SIDE CHAIN' 31 3 G A 20 ? ? 0.119 'SIDE CHAIN' 32 3 C A 22 ? ? 0.073 'SIDE CHAIN' 33 4 G A 1 ? ? 0.074 'SIDE CHAIN' 34 4 G A 9 ? ? 0.092 'SIDE CHAIN' 35 4 A A 10 ? ? 0.093 'SIDE CHAIN' 36 4 G A 11 ? ? 0.088 'SIDE CHAIN' 37 4 A A 12 ? ? 0.085 'SIDE CHAIN' 38 4 C A 13 ? ? 0.131 'SIDE CHAIN' 39 4 A A 16 ? ? 0.070 'SIDE CHAIN' 40 4 A A 18 ? ? 0.132 'SIDE CHAIN' 41 4 G A 20 ? ? 0.147 'SIDE CHAIN' 42 5 G A 1 ? ? 0.077 'SIDE CHAIN' 43 5 G A 6 ? ? 0.080 'SIDE CHAIN' 44 5 A A 7 ? ? 0.079 'SIDE CHAIN' 45 5 A A 10 ? ? 0.072 'SIDE CHAIN' 46 5 A A 12 ? ? 0.071 'SIDE CHAIN' 47 5 C A 13 ? ? 0.143 'SIDE CHAIN' 48 5 U A 14 ? ? 0.098 'SIDE CHAIN' 49 5 A A 18 ? ? 0.135 'SIDE CHAIN' 50 5 A A 19 ? ? 0.112 'SIDE CHAIN' 51 5 G A 20 ? ? 0.127 'SIDE CHAIN' 52 5 C A 22 ? ? 0.064 'SIDE CHAIN' 53 6 U A 5 ? ? 0.061 'SIDE CHAIN' 54 6 A A 7 ? ? 0.062 'SIDE CHAIN' 55 6 G A 9 ? ? 0.084 'SIDE CHAIN' 56 6 A A 10 ? ? 0.073 'SIDE CHAIN' 57 6 A A 12 ? ? 0.091 'SIDE CHAIN' 58 6 C A 13 ? ? 0.148 'SIDE CHAIN' 59 6 G A 17 ? ? 0.095 'SIDE CHAIN' 60 6 G A 20 ? ? 0.143 'SIDE CHAIN' 61 6 C A 21 ? ? 0.074 'SIDE CHAIN' 62 7 G A 9 ? ? 0.123 'SIDE CHAIN' 63 7 A A 10 ? ? 0.055 'SIDE CHAIN' 64 7 G A 11 ? ? 0.066 'SIDE CHAIN' 65 7 A A 12 ? ? 0.094 'SIDE CHAIN' 66 7 C A 13 ? ? 0.145 'SIDE CHAIN' 67 7 U A 14 ? ? 0.066 'SIDE CHAIN' 68 7 G A 17 ? ? 0.083 'SIDE CHAIN' 69 7 G A 20 ? ? 0.105 'SIDE CHAIN' 70 7 C A 21 ? ? 0.077 'SIDE CHAIN' 71 7 C A 22 ? ? 0.077 'SIDE CHAIN' 72 8 G A 1 ? ? 0.077 'SIDE CHAIN' 73 8 G A 2 ? ? 0.058 'SIDE CHAIN' 74 8 C A 3 ? ? 0.099 'SIDE CHAIN' 75 8 C A 4 ? ? 0.076 'SIDE CHAIN' 76 8 G A 9 ? ? 0.055 'SIDE CHAIN' 77 8 A A 10 ? ? 0.079 'SIDE CHAIN' 78 8 G A 11 ? ? 0.055 'SIDE CHAIN' 79 8 C A 13 ? ? 0.156 'SIDE CHAIN' 80 8 G A 17 ? ? 0.071 'SIDE CHAIN' 81 8 A A 18 ? ? 0.067 'SIDE CHAIN' 82 8 A A 19 ? ? 0.060 'SIDE CHAIN' 83 8 C A 22 ? ? 0.072 'SIDE CHAIN' 84 9 G A 8 ? ? 0.136 'SIDE CHAIN' 85 9 G A 9 ? ? 0.097 'SIDE CHAIN' 86 9 A A 10 ? ? 0.092 'SIDE CHAIN' 87 9 A A 12 ? ? 0.115 'SIDE CHAIN' 88 9 C A 13 ? ? 0.092 'SIDE CHAIN' 89 9 A A 18 ? ? 0.061 'SIDE CHAIN' 90 9 G A 20 ? ? 0.149 'SIDE CHAIN' 91 9 C A 21 ? ? 0.066 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1JUR 'double helix' 1JUR 'a-form double helix' 1JUR 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 22 1_555 0.329 -0.055 -0.342 8.114 -9.493 -3.470 1 A_G1:C22_A A 1 ? A 22 ? 19 1 1 A G 2 1_555 A C 21 1_555 -0.695 -0.273 -0.242 -4.325 -14.804 -3.046 2 A_G2:C21_A A 2 ? A 21 ? 19 1 1 A C 3 1_555 A G 20 1_555 0.285 -0.029 0.469 -23.600 0.310 -2.833 3 A_C3:G20_A A 3 ? A 20 ? 19 1 1 A C 4 1_555 A G 17 1_555 -0.669 -0.118 0.117 11.307 -25.487 -7.731 4 A_C4:G17_A A 4 ? A 17 ? 19 1 1 A U 5 1_555 A A 16 1_555 0.102 -0.118 0.476 0.125 -12.452 -1.550 5 A_U5:A16_A A 5 ? A 16 ? 20 1 1 A G 6 1_555 A C 15 1_555 -0.089 -0.095 0.124 6.567 -11.669 -2.873 6 A_G6:C15_A A 6 ? A 15 ? 19 1 1 A A 7 1_555 A U 14 1_555 -0.461 -0.059 -0.163 -11.360 -0.845 -9.361 7 A_A7:U14_A A 7 ? A 14 ? 20 1 1 A G 8 1_555 A C 13 1_555 0.602 -0.026 1.001 32.027 32.131 -5.391 8 A_G8:C13_A A 8 ? A 13 ? 19 1 1 A G 9 1_555 A A 12 1_555 6.009 -3.461 0.769 41.164 44.043 26.482 9 A_G9:A12_A A 9 ? A 12 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 22 1_555 A G 2 1_555 A C 21 1_555 -0.287 -2.525 3.541 -6.590 19.150 19.537 -8.796 -0.644 0.838 43.940 15.121 28.069 1 AA_G1G2:C21C22_AA A 1 ? A 22 ? A 2 ? A 21 ? 1 A G 2 1_555 A C 21 1_555 A C 3 1_555 A G 20 1_555 -0.030 -1.762 3.848 -2.960 13.606 37.341 -4.312 -0.330 3.043 20.403 4.439 39.766 2 AA_G2C3:G20C21_AA A 2 ? A 21 ? A 3 ? A 20 ? 1 A C 3 1_555 A G 20 1_555 A C 4 1_555 A G 17 1_555 3.352 -1.377 4.332 -36.277 24.596 63.873 -1.900 -3.874 1.894 20.906 30.834 76.129 3 AA_C3C4:G17G20_AA A 3 ? A 20 ? A 4 ? A 17 ? 1 A C 4 1_555 A G 17 1_555 A U 5 1_555 A A 16 1_555 -0.322 -1.766 3.601 -6.573 -0.614 33.893 -2.870 -0.594 3.629 -1.041 11.144 34.511 4 AA_C4U5:A16G17_AA A 4 ? A 17 ? A 5 ? A 16 ? 1 A U 5 1_555 A A 16 1_555 A G 6 1_555 A C 15 1_555 -0.271 -2.146 3.177 -1.877 -2.373 30.247 -3.618 0.142 3.342 -4.534 3.586 30.394 5 AA_U5G6:C15A16_AA A 5 ? A 16 ? A 6 ? A 15 ? 1 A G 6 1_555 A C 15 1_555 A A 7 1_555 A U 14 1_555 -0.791 -2.285 3.466 -0.012 6.024 29.578 -5.605 1.518 2.954 11.648 0.024 30.171 6 AA_G6A7:U14C15_AA A 6 ? A 15 ? A 7 ? A 14 ? 1 A A 7 1_555 A U 14 1_555 A G 8 1_555 A C 13 1_555 0.139 -2.076 2.171 -11.636 -11.774 30.159 -2.089 -1.648 2.565 -20.777 20.534 34.311 7 AA_A7G8:C13U14_AA A 7 ? A 14 ? A 8 ? A 13 ? 1 A G 8 1_555 A C 13 1_555 A G 9 1_555 A A 12 1_555 0.871 -1.793 2.481 -4.302 20.170 36.469 -3.821 -1.501 1.256 29.512 6.295 41.723 8 AA_G8G9:A12C13_AA A 8 ? A 13 ? A 9 ? A 12 ? #