HEADER TRANSPORT PROTEIN 28-AUG-01 1JV4 TITLE CRYSTAL STRUCTURE OF RECOMBINANT MAJOR MOUSE URINARY PROTEIN (RMUP) AT TITLE 2 1.75 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR URINARY PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MUP 2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: GROUP 1 MAJOR URINARY PROTEIN; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: GS115; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHIL-D2 KEYWDS LIPOCALIN RECOMBINANT BETA BARREL, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.R.KUSER,L.FRANZONI,E.FERRARI,A.SPISNI,I.POLIKARPOV REVDAT 4 16-AUG-23 1JV4 1 REMARK LINK REVDAT 3 24-FEB-09 1JV4 1 VERSN REVDAT 2 01-APR-03 1JV4 1 JRNL REVDAT 1 05-DEC-01 1JV4 0 JRNL AUTH P.R.KUSER,L.FRANZONI,E.FERRARI,A.SPISNI,I.POLIKARPOV JRNL TITL THE X-RAY STRUCTURE OF A RECOMBINANT MAJOR URINARY PROTEIN JRNL TITL 2 AT 1.75 A RESOLUTION. A COMPARATIVE STUDY OF X-RAY AND JRNL TITL 3 NMR-DERIVED STRUCTURES. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 57 1863 2001 JRNL REFN ISSN 0907-4449 JRNL PMID 11717500 JRNL DOI 10.1107/S090744490101825X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.R.KUSER,S.KRAUCHENCO,A.FANGEL,I.POLIKARPOV REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY DIFFRACTION STUDIES OF A REMARK 1 TITL 2 RECOMBINANT MAJOR URINARY PROTEIN REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 55 1340 1999 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444999005661 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.LUECKE,L.FRANZONI,F.ABBATE,F.LOHR,E.FERRARI,R.T.SORBI, REMARK 1 AUTH 2 H.RUETERJANS,A.SPISNI REMARK 1 TITL SOLUTION STRUCTURE OF A RECOMBINANT MOUSE MAJOR URINARY REMARK 1 TITL 2 PROTEIN REMARK 1 REF EUR.J.BIOCHEM. V. 266 1210 1999 REMARK 1 REFN ISSN 0014-2956 REMARK 1 DOI 10.1046/J.1432-1327.1999.00984.X REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 14021 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 748 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1262 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 171 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.80000 REMARK 3 B22 (A**2) : -0.70000 REMARK 3 B33 (A**2) : -1.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.021 ; NULL REMARK 3 ANGLE DISTANCE (A) : 1.945 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JV4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-01. REMARK 100 THE DEPOSITION ID IS D_1000014217. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-98 REMARK 200 TEMPERATURE (KELVIN) : 277 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : D03B-MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.39 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38851 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 14.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.23300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1MUP.PDB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60MM CDCL2 AND SODIUM PHOSPHATE REMARK 280 BUFFER, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.89500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 158 REMARK 465 GLN A 159 REMARK 465 ALA A 160 REMARK 465 ARG A 161 REMARK 465 GLU A 162 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 1 CG CD OE1 OE2 REMARK 470 GLU A 13 CD OE1 OE2 REMARK 470 ASN A 153 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 172 O HOH A 263 1.95 REMARK 500 O HOH A 244 O HOH A 266 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 172 O HOH A 206 2646 2.03 REMARK 500 CE1 HIS A 20 CD CD A 163 1556 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU A 144 CB LEU A 144 CG 0.360 REMARK 500 LEU A 144 CG LEU A 144 CD1 0.577 REMARK 500 LEU A 144 CG LEU A 144 CD2 0.552 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 27 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 129 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 LEU A 144 CB - CG - CD1 ANGL. DEV. = 16.0 DEGREES REMARK 500 LEU A 144 CB - CG - CD2 ANGL. DEV. = 10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 121.70 66.31 REMARK 500 TYR A 84 109.83 -166.12 REMARK 500 TYR A 97 -49.97 70.99 REMARK 500 ASN A 99 -55.94 -135.48 REMARK 500 ASN A 155 49.88 -80.79 REMARK 500 ARG A 156 -118.37 -85.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 163 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 18 OE2 REMARK 620 2 HIS A 20 NE2 63.2 REMARK 620 3 GLU A 75 OE2 66.4 93.2 REMARK 620 4 GLU A 75 OE1 111.6 102.0 47.1 REMARK 620 5 HOH A 186 O 91.5 85.4 155.5 156.7 REMARK 620 6 HOH A 199 O 159.3 115.1 133.2 89.1 67.9 REMARK 620 7 HOH A 304 O 93.4 156.2 72.0 81.8 100.3 88.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 166 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 18 OE1 REMARK 620 2 GLU A 18 OE2 53.8 REMARK 620 3 GLU A 75 OE2 116.8 64.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 168 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 43 OE1 REMARK 620 2 GLU A 43 OE2 44.6 REMARK 620 3 HOH A 230 O 90.0 45.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 167 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 63 OE2 REMARK 620 2 GLU A 63 OE1 52.7 REMARK 620 3 HOH A 274 O 91.7 101.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 169 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 72 OD1 REMARK 620 2 ASP A 72 OD2 54.1 REMARK 620 3 HOH A 295 O 67.4 88.8 REMARK 620 4 HOH A 318 O 141.3 90.6 100.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 164 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 104 NE2 REMARK 620 2 HIS A 141 ND1 94.3 REMARK 620 3 HOH A 203 O 93.0 85.7 REMARK 620 4 HOH A 219 O 173.5 91.7 84.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 166 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 167 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 169 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TZL A 170 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DF3 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF A RECOMBINANT MOUSE MAJOR URINARY PROTEIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE 136 IS GLN IN RMUP. THERE IS NO MUTATION WITH RESPECT TO REMARK 999 ALL MUP ISOFORMS DEPOSITED IN SWS. THE RECOMBINANT PROTEIN IS JUST REMARK 999 A NEW MUP. IT IS DEPOSITED IN THE EMBLNEW, ACCESSION CODE MMU309921. DBREF 1JV4 A 1 162 UNP P11589 MUP2_MOUSE 19 180 SEQADV 1JV4 GLN A 136 UNP P11589 LYS 154 SEE REMARK 999 SEQRES 1 A 162 GLU GLU ALA SER SER THR GLY ARG ASN PHE ASN VAL GLU SEQRES 2 A 162 LYS ILE ASN GLY GLU TRP HIS THR ILE ILE LEU ALA SER SEQRES 3 A 162 ASP LYS ARG GLU LYS ILE GLU ASP ASN GLY ASN PHE ARG SEQRES 4 A 162 LEU PHE LEU GLU GLN ILE HIS VAL LEU GLU LYS SER LEU SEQRES 5 A 162 VAL LEU LYS PHE HIS THR VAL ARG ASP GLU GLU CYS SER SEQRES 6 A 162 GLU LEU SER MET VAL ALA ASP LYS THR GLU LYS ALA GLY SEQRES 7 A 162 GLU TYR SER VAL THR TYR ASP GLY PHE ASN THR PHE THR SEQRES 8 A 162 ILE PRO LYS THR ASP TYR ASP ASN PHE LEU MET ALA HIS SEQRES 9 A 162 LEU ILE ASN GLU LYS ASP GLY GLU THR PHE GLN LEU MET SEQRES 10 A 162 GLY LEU TYR GLY ARG GLU PRO ASP LEU SER SER ASP ILE SEQRES 11 A 162 LYS GLU ARG PHE ALA GLN LEU CYS GLU GLU HIS GLY ILE SEQRES 12 A 162 LEU ARG GLU ASN ILE ILE ASP LEU SER ASN ALA ASN ARG SEQRES 13 A 162 CYS LEU GLN ALA ARG GLU HET CD A 163 1 HET CD A 164 1 HET CD A 165 1 HET CD A 166 1 HET CD A 167 1 HET CD A 168 1 HET CD A 169 1 HET TZL A 170 9 HETNAM CD CADMIUM ION HETNAM TZL 2-(SEC-BUTYL)THIAZOLE FORMUL 2 CD 7(CD 2+) FORMUL 9 TZL C7 H11 N S FORMUL 10 HOH *171(H2 O) HELIX 1 1 ASN A 11 ASN A 16 5 6 HELIX 2 2 LYS A 28 ILE A 32 5 5 HELIX 3 3 SER A 127 HIS A 141 1 15 HELIX 4 4 LEU A 144 GLU A 146 5 3 SHEET 1 A10 GLY A 17 GLU A 18 0 SHEET 2 A10 LEU A 40 VAL A 47 -1 O ILE A 45 N GLY A 17 SHEET 3 A10 SER A 51 ARG A 60 -1 O VAL A 53 N HIS A 46 SHEET 4 A10 GLU A 63 LYS A 73 -1 O MET A 69 N LEU A 54 SHEET 5 A10 TYR A 80 THR A 83 -1 O SER A 81 N ASP A 72 SHEET 6 A10 PHE A 87 THR A 95 -1 O PHE A 90 N TYR A 80 SHEET 7 A10 PHE A 100 LYS A 109 -1 O MET A 102 N LYS A 94 SHEET 8 A10 GLU A 112 GLY A 121 -1 O LEU A 116 N LEU A 105 SHEET 9 A10 HIS A 20 SER A 26 -1 N ILE A 23 O LEU A 119 SHEET 10 A10 ILE A 148 ASP A 150 -1 O ILE A 149 N LEU A 24 SSBOND 1 CYS A 64 CYS A 157 1555 1555 2.04 LINK OE2 GLU A 18 CD CD A 163 1554 1555 2.37 LINK OE1 GLU A 18 CD CD A 166 1555 1555 2.43 LINK OE2 GLU A 18 CD CD A 166 1555 1555 2.41 LINK NE2 HIS A 20 CD CD A 163 1554 1555 2.87 LINK OE1 GLU A 43 CD CD A 168 1555 1555 2.22 LINK OE2 GLU A 43 CD CD A 168 1555 1555 3.14 LINK OE2 GLU A 63 CD CD A 167 1555 1555 2.22 LINK OE1 GLU A 63 CD CD A 167 1555 1555 2.63 LINK OD1 ASP A 72 CD CD A 169 1555 1555 2.44 LINK OD2 ASP A 72 CD CD A 169 1555 1555 2.26 LINK OE2 GLU A 75 CD CD A 163 1555 1555 2.39 LINK OE1 GLU A 75 CD CD A 163 1555 1555 2.96 LINK OE2 GLU A 75 CD CD A 166 1556 1555 2.52 LINK NE2 HIS A 104 CD CD A 164 1555 1555 2.32 LINK ND1 HIS A 141 CD CD A 164 1555 1555 2.29 LINK CD CD A 163 O HOH A 186 1555 1554 2.65 LINK CD CD A 163 O HOH A 199 1555 1554 2.46 LINK CD CD A 163 O HOH A 304 1555 1554 2.24 LINK CD CD A 164 O HOH A 203 1555 1555 2.80 LINK CD CD A 164 O HOH A 219 1555 1555 2.31 LINK CD CD A 165 O HOH A 234 1555 1555 3.07 LINK CD CD A 167 O HOH A 274 1555 1455 2.24 LINK CD CD A 168 O HOH A 230 1555 1555 2.69 LINK CD CD A 169 O HOH A 295 1555 1555 3.10 LINK CD CD A 169 O HOH A 318 1555 1555 2.35 SITE 1 AC1 6 GLU A 18 HIS A 20 GLU A 75 HOH A 186 SITE 2 AC1 6 HOH A 199 HOH A 304 SITE 1 AC2 5 HIS A 104 GLN A 115 HIS A 141 HOH A 203 SITE 2 AC2 5 HOH A 219 SITE 1 AC3 2 HIS A 46 HOH A 234 SITE 1 AC4 2 GLU A 18 GLU A 75 SITE 1 AC5 2 GLU A 63 HOH A 274 SITE 1 AC6 2 GLU A 43 HOH A 230 SITE 1 AC7 3 ASP A 72 HOH A 295 HOH A 318 SITE 1 AC8 2 PHE A 90 TYR A 120 CRYST1 37.140 55.790 37.670 90.00 93.24 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026925 -0.000001 0.001523 0.00000 SCALE2 0.000000 0.017924 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026589 0.00000