data_1JV6 # _entry.id 1JV6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1JV6 pdb_00001jv6 10.2210/pdb1jv6/pdb RCSB RCSB014219 ? ? WWPDB D_1000014219 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-10-31 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 5 'Structure model' 1 4 2023-08-16 6 'Structure model' 1 5 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' pdbx_initial_refinement_model 8 6 'Structure model' pdbx_entry_details 9 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1JV6 _pdbx_database_status.recvd_initial_deposition_date 2001-08-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1JV7 _pdbx_database_related.details 'BACTERIORHODOPSIN O-LIKE INTERMEDIATE STATE OF THE D85S MUTANT AT 2.25 ANGSTROM RESOLUTION' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rouhani, S.' 1 'Cartailler, J.-P.' 2 'Facciotti, M.T.' 3 'Walian, P.' 4 'Needleman, R.' 5 'Lanyi, J.K.' 6 'Glaeser, R.M.' 7 'Luecke, H.' 8 # _citation.id primary _citation.title 'Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 313 _citation.page_first 615 _citation.page_last 628 _citation.year 2001 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11676543 _citation.pdbx_database_id_DOI 10.1006/jmbi.2001.5066 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rouhani, S.' 1 ? primary 'Cartailler, J.P.' 2 ? primary 'Facciotti, M.T.' 3 ? primary 'Walian, P.' 4 ? primary 'Needleman, R.' 5 ? primary 'Lanyi, J.K.' 6 ? primary 'Glaeser, R.M.' 7 ? primary 'Luecke, H.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Bacteriorhodopsin 26867.475 1 ? D85S,F219L ? ? 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn '1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL' 639.130 8 ? ? ? ? 4 water nat water 18.015 34 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BR # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYASWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGLGLILLRSRAIFGEAEAPEPSA GDGAAATSD ; _entity_poly.pdbx_seq_one_letter_code_can ;QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYASWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGLGLILLRSRAIFGEAEAPEPSA GDGAAATSD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 '1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL' LI1 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ALA n 1 3 GLN n 1 4 ILE n 1 5 THR n 1 6 GLY n 1 7 ARG n 1 8 PRO n 1 9 GLU n 1 10 TRP n 1 11 ILE n 1 12 TRP n 1 13 LEU n 1 14 ALA n 1 15 LEU n 1 16 GLY n 1 17 THR n 1 18 ALA n 1 19 LEU n 1 20 MET n 1 21 GLY n 1 22 LEU n 1 23 GLY n 1 24 THR n 1 25 LEU n 1 26 TYR n 1 27 PHE n 1 28 LEU n 1 29 VAL n 1 30 LYS n 1 31 GLY n 1 32 MET n 1 33 GLY n 1 34 VAL n 1 35 SER n 1 36 ASP n 1 37 PRO n 1 38 ASP n 1 39 ALA n 1 40 LYS n 1 41 LYS n 1 42 PHE n 1 43 TYR n 1 44 ALA n 1 45 ILE n 1 46 THR n 1 47 THR n 1 48 LEU n 1 49 VAL n 1 50 PRO n 1 51 ALA n 1 52 ILE n 1 53 ALA n 1 54 PHE n 1 55 THR n 1 56 MET n 1 57 TYR n 1 58 LEU n 1 59 SER n 1 60 MET n 1 61 LEU n 1 62 LEU n 1 63 GLY n 1 64 TYR n 1 65 GLY n 1 66 LEU n 1 67 THR n 1 68 MET n 1 69 VAL n 1 70 PRO n 1 71 PHE n 1 72 GLY n 1 73 GLY n 1 74 GLU n 1 75 GLN n 1 76 ASN n 1 77 PRO n 1 78 ILE n 1 79 TYR n 1 80 TRP n 1 81 ALA n 1 82 ARG n 1 83 TYR n 1 84 ALA n 1 85 SER n 1 86 TRP n 1 87 LEU n 1 88 PHE n 1 89 THR n 1 90 THR n 1 91 PRO n 1 92 LEU n 1 93 LEU n 1 94 LEU n 1 95 LEU n 1 96 ASP n 1 97 LEU n 1 98 ALA n 1 99 LEU n 1 100 LEU n 1 101 VAL n 1 102 ASP n 1 103 ALA n 1 104 ASP n 1 105 GLN n 1 106 GLY n 1 107 THR n 1 108 ILE n 1 109 LEU n 1 110 ALA n 1 111 LEU n 1 112 VAL n 1 113 GLY n 1 114 ALA n 1 115 ASP n 1 116 GLY n 1 117 ILE n 1 118 MET n 1 119 ILE n 1 120 GLY n 1 121 THR n 1 122 GLY n 1 123 LEU n 1 124 VAL n 1 125 GLY n 1 126 ALA n 1 127 LEU n 1 128 THR n 1 129 LYS n 1 130 VAL n 1 131 TYR n 1 132 SER n 1 133 TYR n 1 134 ARG n 1 135 PHE n 1 136 VAL n 1 137 TRP n 1 138 TRP n 1 139 ALA n 1 140 ILE n 1 141 SER n 1 142 THR n 1 143 ALA n 1 144 ALA n 1 145 MET n 1 146 LEU n 1 147 TYR n 1 148 ILE n 1 149 LEU n 1 150 TYR n 1 151 VAL n 1 152 LEU n 1 153 PHE n 1 154 PHE n 1 155 GLY n 1 156 PHE n 1 157 THR n 1 158 SER n 1 159 LYS n 1 160 ALA n 1 161 GLU n 1 162 SER n 1 163 MET n 1 164 ARG n 1 165 PRO n 1 166 GLU n 1 167 VAL n 1 168 ALA n 1 169 SER n 1 170 THR n 1 171 PHE n 1 172 LYS n 1 173 VAL n 1 174 LEU n 1 175 ARG n 1 176 ASN n 1 177 VAL n 1 178 THR n 1 179 VAL n 1 180 VAL n 1 181 LEU n 1 182 TRP n 1 183 SER n 1 184 ALA n 1 185 TYR n 1 186 PRO n 1 187 VAL n 1 188 VAL n 1 189 TRP n 1 190 LEU n 1 191 ILE n 1 192 GLY n 1 193 SER n 1 194 GLU n 1 195 GLY n 1 196 ALA n 1 197 GLY n 1 198 ILE n 1 199 VAL n 1 200 PRO n 1 201 LEU n 1 202 ASN n 1 203 ILE n 1 204 GLU n 1 205 THR n 1 206 LEU n 1 207 LEU n 1 208 PHE n 1 209 MET n 1 210 VAL n 1 211 LEU n 1 212 ASP n 1 213 VAL n 1 214 SER n 1 215 ALA n 1 216 LYS n 1 217 VAL n 1 218 GLY n 1 219 LEU n 1 220 GLY n 1 221 LEU n 1 222 ILE n 1 223 LEU n 1 224 LEU n 1 225 ARG n 1 226 SER n 1 227 ARG n 1 228 ALA n 1 229 ILE n 1 230 PHE n 1 231 GLY n 1 232 GLU n 1 233 ALA n 1 234 GLU n 1 235 ALA n 1 236 PRO n 1 237 GLU n 1 238 PRO n 1 239 SER n 1 240 ALA n 1 241 GLY n 1 242 ASP n 1 243 GLY n 1 244 ALA n 1 245 ALA n 1 246 ALA n 1 247 THR n 1 248 SER n 1 249 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Halobacterium _entity_src_gen.pdbx_gene_src_gene Bop _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Halobacterium salinarum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2242 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Halobacterium salinarum' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 2242 _entity_src_gen.host_org_genus Halobacterium _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNov-r _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LI1 non-polymer . '1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL' 'LIPID FRAGMENT' 'C42 H86 O3' 639.130 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 GLN 3 3 ? ? ? A . n A 1 4 ILE 4 4 ? ? ? A . n A 1 5 THR 5 5 ? ? ? A . n A 1 6 GLY 6 6 ? ? ? A . n A 1 7 ARG 7 7 ? ? ? A . n A 1 8 PRO 8 8 ? ? ? A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 TRP 12 12 12 TRP TRP A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 TYR 64 64 ? ? ? A . n A 1 65 GLY 65 65 ? ? ? A . n A 1 66 LEU 66 66 ? ? ? A . n A 1 67 THR 67 67 ? ? ? A . n A 1 68 MET 68 68 ? ? ? A . n A 1 69 VAL 69 69 ? ? ? A . n A 1 70 PRO 70 70 ? ? ? A . n A 1 71 PHE 71 71 ? ? ? A . n A 1 72 GLY 72 72 ? ? ? A . n A 1 73 GLY 73 73 ? ? ? A . n A 1 74 GLU 74 74 ? ? ? A . n A 1 75 GLN 75 75 ? ? ? A . n A 1 76 ASN 76 76 ? ? ? A . n A 1 77 PRO 77 77 ? ? ? A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 TRP 80 80 80 TRP TRP A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 MET 118 118 118 MET MET A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 TRP 137 137 137 TRP TRP A . n A 1 138 TRP 138 138 138 TRP TRP A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 MET 145 145 145 MET MET A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 MET 163 163 163 MET MET A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 TYR 185 185 185 TYR TYR A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 TRP 189 189 189 TRP TRP A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ILE 198 198 198 ILE ILE A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 MET 209 209 209 MET MET A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 ILE 222 222 222 ILE ILE A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 GLY 231 231 ? ? ? A . n A 1 232 GLU 232 232 ? ? ? A . n A 1 233 ALA 233 233 ? ? ? A . n A 1 234 GLU 234 234 ? ? ? A . n A 1 235 ALA 235 235 ? ? ? A . n A 1 236 PRO 236 236 ? ? ? A . n A 1 237 GLU 237 237 ? ? ? A . n A 1 238 PRO 238 238 ? ? ? A . n A 1 239 SER 239 239 ? ? ? A . n A 1 240 ALA 240 240 ? ? ? A . n A 1 241 GLY 241 241 ? ? ? A . n A 1 242 ASP 242 242 ? ? ? A . n A 1 243 GLY 243 243 ? ? ? A . n A 1 244 ALA 244 244 ? ? ? A . n A 1 245 ALA 245 245 ? ? ? A . n A 1 246 ALA 246 246 ? ? ? A . n A 1 247 THR 247 247 ? ? ? A . n A 1 248 SER 248 248 ? ? ? A . n A 1 249 ASP 249 249 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 301 301 RET RET A . C 3 LI1 1 701 701 LI1 LI1 A . D 3 LI1 1 702 702 LI1 LI1 A . E 3 LI1 1 703 703 LI1 LI1 A . F 3 LI1 1 710 710 LI1 LI1 A . G 3 LI1 1 711 711 LI1 LI1 A . H 3 LI1 1 712 712 LI1 LI1 A . I 3 LI1 1 713 713 LI1 LI1 A . J 3 LI1 1 722 722 LI1 LI1 A . K 4 HOH 1 402 402 HOH HOH A . K 4 HOH 2 405 405 HOH HOH A . K 4 HOH 3 407 407 HOH HOH A . K 4 HOH 4 409 409 HOH HOH A . K 4 HOH 5 410 410 HOH HOH A . K 4 HOH 6 419 419 HOH HOH A . K 4 HOH 7 420 420 HOH HOH A . K 4 HOH 8 421 421 HOH HOH A . K 4 HOH 9 422 422 HOH HOH A . K 4 HOH 10 423 423 HOH HOH A . K 4 HOH 11 501 501 HOH HOH A . K 4 HOH 12 502 502 HOH HOH A . K 4 HOH 13 503 503 HOH HOH A . K 4 HOH 14 510 510 HOH HOH A . K 4 HOH 15 511 511 HOH HOH A . K 4 HOH 16 512 512 HOH HOH A . K 4 HOH 17 513 513 HOH HOH A . K 4 HOH 18 514 514 HOH HOH A . K 4 HOH 19 515 515 HOH HOH A . K 4 HOH 20 516 516 HOH HOH A . K 4 HOH 21 517 517 HOH HOH A . K 4 HOH 22 518 518 HOH HOH A . K 4 HOH 23 519 519 HOH HOH A . K 4 HOH 24 520 520 HOH HOH A . K 4 HOH 25 521 521 HOH HOH A . K 4 HOH 26 522 522 HOH HOH A . K 4 HOH 27 523 523 HOH HOH A . K 4 HOH 28 524 524 HOH HOH A . K 4 HOH 29 525 525 HOH HOH A . K 4 HOH 30 526 526 HOH HOH A . K 4 HOH 31 527 527 HOH HOH A . K 4 HOH 32 528 528 HOH HOH A . K 4 HOH 33 529 529 HOH HOH A . K 4 HOH 34 530 530 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A LI1 701 ? C1 ? C LI1 1 C1 2 1 N 1 A LI1 701 ? C2 ? C LI1 1 C2 3 1 N 1 A LI1 701 ? C3 ? C LI1 1 C3 4 1 N 1 A LI1 701 ? O1 ? C LI1 1 O1 5 1 N 1 A LI1 701 ? O2 ? C LI1 1 O2 6 1 N 1 A LI1 701 ? O3 ? C LI1 1 O3 7 1 N 1 A LI1 701 ? C11 ? C LI1 1 C11 8 1 N 1 A LI1 701 ? C12 ? C LI1 1 C12 9 1 N 1 A LI1 701 ? C13 ? C LI1 1 C13 10 1 N 1 A LI1 701 ? C14 ? C LI1 1 C14 11 1 N 1 A LI1 701 ? C15 ? C LI1 1 C15 12 1 N 1 A LI1 701 ? C16 ? C LI1 1 C16 13 1 N 1 A LI1 701 ? C17 ? C LI1 1 C17 14 1 N 1 A LI1 701 ? C18 ? C LI1 1 C18 15 1 N 1 A LI1 701 ? C19 ? C LI1 1 C19 16 1 N 1 A LI1 701 ? C20 ? C LI1 1 C20 17 1 N 1 A LI1 701 ? C21 ? C LI1 1 C21 18 1 N 1 A LI1 701 ? C22 ? C LI1 1 C22 19 1 N 1 A LI1 701 ? C23 ? C LI1 1 C23 20 1 N 1 A LI1 701 ? C24 ? C LI1 1 C24 21 1 N 1 A LI1 701 ? C25 ? C LI1 1 C25 22 1 N 1 A LI1 701 ? C26 ? C LI1 1 C26 23 1 N 1 A LI1 701 ? C27 ? C LI1 1 C27 24 1 N 1 A LI1 701 ? C28 ? C LI1 1 C28 25 1 N 1 A LI1 701 ? C29 ? C LI1 1 C29 26 1 N 1 A LI1 701 ? C30 ? C LI1 1 C30 27 1 N 1 A LI1 702 ? C1 ? D LI1 1 C1 28 1 N 1 A LI1 702 ? C2 ? D LI1 1 C2 29 1 N 1 A LI1 702 ? C3 ? D LI1 1 C3 30 1 N 1 A LI1 702 ? O2 ? D LI1 1 O2 31 1 N 1 A LI1 702 ? O3 ? D LI1 1 O3 32 1 N 1 A LI1 702 ? C41 ? D LI1 1 C41 33 1 N 1 A LI1 702 ? C42 ? D LI1 1 C42 34 1 N 1 A LI1 702 ? C43 ? D LI1 1 C43 35 1 N 1 A LI1 702 ? C44 ? D LI1 1 C44 36 1 N 1 A LI1 702 ? C45 ? D LI1 1 C45 37 1 N 1 A LI1 702 ? C46 ? D LI1 1 C46 38 1 N 1 A LI1 702 ? C47 ? D LI1 1 C47 39 1 N 1 A LI1 702 ? C48 ? D LI1 1 C48 40 1 N 1 A LI1 702 ? C49 ? D LI1 1 C49 41 1 N 1 A LI1 702 ? C50 ? D LI1 1 C50 42 1 N 1 A LI1 702 ? C51 ? D LI1 1 C51 43 1 N 1 A LI1 702 ? C52 ? D LI1 1 C52 44 1 N 1 A LI1 702 ? C53 ? D LI1 1 C53 45 1 N 1 A LI1 702 ? C55 ? D LI1 1 C55 46 1 N 1 A LI1 702 ? C56 ? D LI1 1 C56 47 1 N 1 A LI1 702 ? C57 ? D LI1 1 C57 48 1 N 1 A LI1 702 ? C58 ? D LI1 1 C58 49 1 N 1 A LI1 702 ? C59 ? D LI1 1 C59 50 1 N 1 A LI1 702 ? C60 ? D LI1 1 C60 51 1 N 1 A LI1 702 ? C19 ? D LI1 1 C19 52 1 N 1 A LI1 703 ? C1 ? E LI1 1 C1 53 1 N 1 A LI1 703 ? C2 ? E LI1 1 C2 54 1 N 1 A LI1 703 ? C3 ? E LI1 1 C3 55 1 N 1 A LI1 703 ? O2 ? E LI1 1 O2 56 1 N 1 A LI1 703 ? O3 ? E LI1 1 O3 57 1 N 1 A LI1 703 ? C41 ? E LI1 1 C41 58 1 N 1 A LI1 703 ? C42 ? E LI1 1 C42 59 1 N 1 A LI1 703 ? C43 ? E LI1 1 C43 60 1 N 1 A LI1 703 ? C44 ? E LI1 1 C44 61 1 N 1 A LI1 703 ? C45 ? E LI1 1 C45 62 1 N 1 A LI1 703 ? C46 ? E LI1 1 C46 63 1 N 1 A LI1 703 ? C47 ? E LI1 1 C47 64 1 N 1 A LI1 703 ? C48 ? E LI1 1 C48 65 1 N 1 A LI1 703 ? C49 ? E LI1 1 C49 66 1 N 1 A LI1 703 ? C50 ? E LI1 1 C50 67 1 N 1 A LI1 703 ? C51 ? E LI1 1 C51 68 1 N 1 A LI1 703 ? C52 ? E LI1 1 C52 69 1 N 1 A LI1 703 ? C53 ? E LI1 1 C53 70 1 N 1 A LI1 703 ? C55 ? E LI1 1 C55 71 1 N 1 A LI1 703 ? C56 ? E LI1 1 C56 72 1 N 1 A LI1 703 ? C57 ? E LI1 1 C57 73 1 N 1 A LI1 703 ? C58 ? E LI1 1 C58 74 1 N 1 A LI1 703 ? C59 ? E LI1 1 C59 75 1 N 1 A LI1 703 ? C60 ? E LI1 1 C60 76 1 N 1 A LI1 703 ? C22 ? E LI1 1 C22 77 1 N 1 A LI1 703 ? C23 ? E LI1 1 C23 78 1 N 1 A LI1 703 ? C24 ? E LI1 1 C24 79 1 N 1 A LI1 703 ? C25 ? E LI1 1 C25 80 1 N 1 A LI1 703 ? C26 ? E LI1 1 C26 81 1 N 1 A LI1 703 ? C27 ? E LI1 1 C27 82 1 N 1 A LI1 703 ? C28 ? E LI1 1 C28 83 1 N 1 A LI1 703 ? C29 ? E LI1 1 C29 84 1 N 1 A LI1 703 ? C30 ? E LI1 1 C30 85 1 N 1 A LI1 710 ? C1 ? F LI1 1 C1 86 1 N 1 A LI1 710 ? C2 ? F LI1 1 C2 87 1 N 1 A LI1 710 ? C3 ? F LI1 1 C3 88 1 N 1 A LI1 710 ? O2 ? F LI1 1 O2 89 1 N 1 A LI1 710 ? O3 ? F LI1 1 O3 90 1 N 1 A LI1 710 ? C41 ? F LI1 1 C41 91 1 N 1 A LI1 710 ? C42 ? F LI1 1 C42 92 1 N 1 A LI1 710 ? C43 ? F LI1 1 C43 93 1 N 1 A LI1 710 ? C44 ? F LI1 1 C44 94 1 N 1 A LI1 710 ? C45 ? F LI1 1 C45 95 1 N 1 A LI1 710 ? C46 ? F LI1 1 C46 96 1 N 1 A LI1 710 ? C47 ? F LI1 1 C47 97 1 N 1 A LI1 710 ? C48 ? F LI1 1 C48 98 1 N 1 A LI1 710 ? C49 ? F LI1 1 C49 99 1 N 1 A LI1 710 ? C50 ? F LI1 1 C50 100 1 N 1 A LI1 710 ? C51 ? F LI1 1 C51 101 1 N 1 A LI1 710 ? C52 ? F LI1 1 C52 102 1 N 1 A LI1 710 ? C53 ? F LI1 1 C53 103 1 N 1 A LI1 710 ? C55 ? F LI1 1 C55 104 1 N 1 A LI1 710 ? C56 ? F LI1 1 C56 105 1 N 1 A LI1 710 ? C57 ? F LI1 1 C57 106 1 N 1 A LI1 710 ? C58 ? F LI1 1 C58 107 1 N 1 A LI1 710 ? C59 ? F LI1 1 C59 108 1 N 1 A LI1 710 ? C60 ? F LI1 1 C60 109 1 N 1 A LI1 711 ? C1 ? G LI1 1 C1 110 1 N 1 A LI1 711 ? C2 ? G LI1 1 C2 111 1 N 1 A LI1 711 ? C3 ? G LI1 1 C3 112 1 N 1 A LI1 711 ? O1 ? G LI1 1 O1 113 1 N 1 A LI1 711 ? O2 ? G LI1 1 O2 114 1 N 1 A LI1 711 ? O3 ? G LI1 1 O3 115 1 N 1 A LI1 711 ? C41 ? G LI1 1 C41 116 1 N 1 A LI1 711 ? C42 ? G LI1 1 C42 117 1 N 1 A LI1 711 ? C43 ? G LI1 1 C43 118 1 N 1 A LI1 711 ? C44 ? G LI1 1 C44 119 1 N 1 A LI1 711 ? C45 ? G LI1 1 C45 120 1 N 1 A LI1 711 ? C46 ? G LI1 1 C46 121 1 N 1 A LI1 711 ? C47 ? G LI1 1 C47 122 1 N 1 A LI1 711 ? C48 ? G LI1 1 C48 123 1 N 1 A LI1 711 ? C49 ? G LI1 1 C49 124 1 N 1 A LI1 711 ? C50 ? G LI1 1 C50 125 1 N 1 A LI1 711 ? C51 ? G LI1 1 C51 126 1 N 1 A LI1 711 ? C52 ? G LI1 1 C52 127 1 N 1 A LI1 711 ? C53 ? G LI1 1 C53 128 1 N 1 A LI1 711 ? C55 ? G LI1 1 C55 129 1 N 1 A LI1 711 ? C56 ? G LI1 1 C56 130 1 N 1 A LI1 711 ? C57 ? G LI1 1 C57 131 1 N 1 A LI1 711 ? C58 ? G LI1 1 C58 132 1 N 1 A LI1 711 ? C59 ? G LI1 1 C59 133 1 N 1 A LI1 711 ? C60 ? G LI1 1 C60 134 1 N 1 A LI1 711 ? C22 ? G LI1 1 C22 135 1 N 1 A LI1 711 ? C23 ? G LI1 1 C23 136 1 N 1 A LI1 711 ? C24 ? G LI1 1 C24 137 1 N 1 A LI1 711 ? C25 ? G LI1 1 C25 138 1 N 1 A LI1 711 ? C26 ? G LI1 1 C26 139 1 N 1 A LI1 711 ? C27 ? G LI1 1 C27 140 1 N 1 A LI1 711 ? C28 ? G LI1 1 C28 141 1 N 1 A LI1 711 ? C29 ? G LI1 1 C29 142 1 N 1 A LI1 711 ? C30 ? G LI1 1 C30 143 1 N 1 A LI1 712 ? C1 ? H LI1 1 C1 144 1 N 1 A LI1 712 ? C2 ? H LI1 1 C2 145 1 N 1 A LI1 712 ? C3 ? H LI1 1 C3 146 1 N 1 A LI1 712 ? O2 ? H LI1 1 O2 147 1 N 1 A LI1 712 ? O3 ? H LI1 1 O3 148 1 N 1 A LI1 712 ? C41 ? H LI1 1 C41 149 1 N 1 A LI1 712 ? C42 ? H LI1 1 C42 150 1 N 1 A LI1 712 ? C43 ? H LI1 1 C43 151 1 N 1 A LI1 712 ? C44 ? H LI1 1 C44 152 1 N 1 A LI1 712 ? C45 ? H LI1 1 C45 153 1 N 1 A LI1 712 ? C46 ? H LI1 1 C46 154 1 N 1 A LI1 712 ? C47 ? H LI1 1 C47 155 1 N 1 A LI1 712 ? C48 ? H LI1 1 C48 156 1 N 1 A LI1 712 ? C49 ? H LI1 1 C49 157 1 N 1 A LI1 712 ? C50 ? H LI1 1 C50 158 1 N 1 A LI1 712 ? C51 ? H LI1 1 C51 159 1 N 1 A LI1 712 ? C52 ? H LI1 1 C52 160 1 N 1 A LI1 712 ? C53 ? H LI1 1 C53 161 1 N 1 A LI1 712 ? C55 ? H LI1 1 C55 162 1 N 1 A LI1 712 ? C56 ? H LI1 1 C56 163 1 N 1 A LI1 712 ? C57 ? H LI1 1 C57 164 1 N 1 A LI1 712 ? C58 ? H LI1 1 C58 165 1 N 1 A LI1 712 ? C59 ? H LI1 1 C59 166 1 N 1 A LI1 712 ? C60 ? H LI1 1 C60 167 1 N 1 A LI1 712 ? C27 ? H LI1 1 C27 168 1 N 1 A LI1 712 ? C28 ? H LI1 1 C28 169 1 N 1 A LI1 712 ? C29 ? H LI1 1 C29 170 1 N 1 A LI1 712 ? C30 ? H LI1 1 C30 171 1 N 1 A LI1 713 ? C1 ? I LI1 1 C1 172 1 N 1 A LI1 713 ? C2 ? I LI1 1 C2 173 1 N 1 A LI1 713 ? C3 ? I LI1 1 C3 174 1 N 1 A LI1 713 ? O2 ? I LI1 1 O2 175 1 N 1 A LI1 713 ? O3 ? I LI1 1 O3 176 1 N 1 A LI1 713 ? C41 ? I LI1 1 C41 177 1 N 1 A LI1 713 ? C42 ? I LI1 1 C42 178 1 N 1 A LI1 713 ? C43 ? I LI1 1 C43 179 1 N 1 A LI1 713 ? C44 ? I LI1 1 C44 180 1 N 1 A LI1 713 ? C45 ? I LI1 1 C45 181 1 N 1 A LI1 713 ? C46 ? I LI1 1 C46 182 1 N 1 A LI1 713 ? C47 ? I LI1 1 C47 183 1 N 1 A LI1 713 ? C48 ? I LI1 1 C48 184 1 N 1 A LI1 713 ? C49 ? I LI1 1 C49 185 1 N 1 A LI1 713 ? C50 ? I LI1 1 C50 186 1 N 1 A LI1 713 ? C51 ? I LI1 1 C51 187 1 N 1 A LI1 713 ? C52 ? I LI1 1 C52 188 1 N 1 A LI1 713 ? C53 ? I LI1 1 C53 189 1 N 1 A LI1 713 ? C55 ? I LI1 1 C55 190 1 N 1 A LI1 713 ? C56 ? I LI1 1 C56 191 1 N 1 A LI1 713 ? C57 ? I LI1 1 C57 192 1 N 1 A LI1 713 ? C58 ? I LI1 1 C58 193 1 N 1 A LI1 713 ? C59 ? I LI1 1 C59 194 1 N 1 A LI1 713 ? C60 ? I LI1 1 C60 195 1 N 1 A LI1 713 ? C22 ? I LI1 1 C22 196 1 N 1 A LI1 713 ? C23 ? I LI1 1 C23 197 1 N 1 A LI1 713 ? C24 ? I LI1 1 C24 198 1 N 1 A LI1 713 ? C25 ? I LI1 1 C25 199 1 N 1 A LI1 713 ? C26 ? I LI1 1 C26 200 1 N 1 A LI1 713 ? C27 ? I LI1 1 C27 201 1 N 1 A LI1 713 ? C28 ? I LI1 1 C28 202 1 N 1 A LI1 713 ? C29 ? I LI1 1 C29 203 1 N 1 A LI1 713 ? C30 ? I LI1 1 C30 204 1 N 1 A LI1 722 ? C1 ? J LI1 1 C1 205 1 N 1 A LI1 722 ? C2 ? J LI1 1 C2 206 1 N 1 A LI1 722 ? C3 ? J LI1 1 C3 207 1 N 1 A LI1 722 ? O1 ? J LI1 1 O1 208 1 N 1 A LI1 722 ? O2 ? J LI1 1 O2 209 1 N 1 A LI1 722 ? O3 ? J LI1 1 O3 210 1 N 1 A LI1 722 ? C41 ? J LI1 1 C41 211 1 N 1 A LI1 722 ? C42 ? J LI1 1 C42 212 1 N 1 A LI1 722 ? C43 ? J LI1 1 C43 213 1 N 1 A LI1 722 ? C44 ? J LI1 1 C44 214 1 N 1 A LI1 722 ? C45 ? J LI1 1 C45 215 1 N 1 A LI1 722 ? C46 ? J LI1 1 C46 216 1 N 1 A LI1 722 ? C47 ? J LI1 1 C47 217 1 N 1 A LI1 722 ? C48 ? J LI1 1 C48 218 1 N 1 A LI1 722 ? C49 ? J LI1 1 C49 219 1 N 1 A LI1 722 ? C50 ? J LI1 1 C50 220 1 N 1 A LI1 722 ? C51 ? J LI1 1 C51 221 1 N 1 A LI1 722 ? C52 ? J LI1 1 C52 222 1 N 1 A LI1 722 ? C53 ? J LI1 1 C53 223 1 N 1 A LI1 722 ? C55 ? J LI1 1 C55 224 1 N 1 A LI1 722 ? C56 ? J LI1 1 C56 225 1 N 1 A LI1 722 ? C57 ? J LI1 1 C57 226 1 N 1 A LI1 722 ? C58 ? J LI1 1 C58 227 1 N 1 A LI1 722 ? C59 ? J LI1 1 C59 228 1 N 1 A LI1 722 ? C60 ? J LI1 1 C60 229 1 N 1 A LI1 722 ? C11 ? J LI1 1 C11 230 1 N 1 A LI1 722 ? C19 ? J LI1 1 C19 231 1 N 1 A LI1 722 ? C22 ? J LI1 1 C22 232 1 N 1 A LI1 722 ? C23 ? J LI1 1 C23 233 1 N 1 A LI1 722 ? C24 ? J LI1 1 C24 234 1 N 1 A LI1 722 ? C25 ? J LI1 1 C25 235 1 N 1 A LI1 722 ? C26 ? J LI1 1 C26 236 1 N 1 A LI1 722 ? C27 ? J LI1 1 C27 237 1 N 1 A LI1 722 ? C28 ? J LI1 1 C28 238 1 N 1 A LI1 722 ? C29 ? J LI1 1 C29 239 1 N 1 A LI1 722 ? C30 ? J LI1 1 C30 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 CNS refinement 1.0 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 1JV6 _cell.length_a 51.800 _cell.length_b 121.300 _cell.length_c 85.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JV6 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # _exptl.entry_id 1JV6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.6 _exptl_crystal.density_percent_sol 52.1 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'cubic lipid phase' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'monoolein, octyl-beta-D-glucopyranoside, pH 5.6, cubic lipid phase, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM' _diffrn_detector.pdbx_collection_date 1999-04-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 1JV6 _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 14934 _reflns.number_all 18717 _reflns.percent_possible_obs 79.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0770000 _reflns.pdbx_netI_over_sigmaI 14.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 42 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.5580000 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 769 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1JV6 _refine.ls_number_reflns_obs 13778 _refine.ls_number_reflns_all 18546 _refine.pdbx_ls_sigma_I 1 _refine.pdbx_ls_sigma_F 1 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 12.0 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2440000 _refine.ls_R_factor_all 0.2500000 _refine.ls_R_factor_R_work 0.2220000 _refine.ls_R_factor_R_free 0.2400000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 682 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'Intensities (I) and not amplitude (F) was used in refinement.' _refine.pdbx_starting_model 'PDB ENTRY 1JV7 (Bacteriorhodopsin D85S coordinates, without diether lipids nor water)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1613 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 141 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 1788 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 12.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.103 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.0065 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file protein_rep.param _pdbx_xplor_file.topol_file protein.top _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1JV6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1JV6 _struct.title 'BACTERIORHODOPSIN D85S/F219L DOUBLE MUTANT AT 2.00 ANGSTROM RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1JV6 _struct_keywords.pdbx_keywords 'ION TRANSPORT' _struct_keywords.text 'PHOTORECEPTOR, HALOARCHAEA, 7-TRANSMEMBRANE, ION TRANSPORT, F219L MUTANT, CUBIC LIPID PHASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACR_HALN1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLELLPTAVEGVSQAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLT MVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLY ILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSR AIFGEAEAPEPSAGDGAAATSD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P02945 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1JV6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 249 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02945 _struct_ref_seq.db_align_beg 14 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 262 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 249 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1JV6 SER A 85 ? UNP P02945 ASP 98 'engineered mutation' 85 1 1 1JV6 LEU A 219 ? UNP P02945 PHE 232 'engineered mutation' 219 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 9 ? MET A 32 ? GLU A 9 MET A 32 1 ? 24 HELX_P HELX_P2 2 ASP A 36 ? GLY A 63 ? ASP A 36 GLY A 63 1 ? 28 HELX_P HELX_P3 3 ILE A 78 ? VAL A 101 ? ILE A 78 VAL A 101 1 ? 24 HELX_P HELX_P4 4 ASP A 104 ? THR A 128 ? ASP A 104 THR A 128 1 ? 25 HELX_P HELX_P5 5 VAL A 130 ? SER A 162 ? VAL A 130 SER A 162 1 ? 33 HELX_P HELX_P6 6 ARG A 164 ? GLY A 192 ? ARG A 164 GLY A 192 1 ? 29 HELX_P HELX_P7 7 PRO A 200 ? ARG A 225 ? PRO A 200 ARG A 225 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 216 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 216 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.403 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id RET _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id LYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 216 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id RET _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 301 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id LYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 216 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C15 _pdbx_modification_feature.modified_residue_id_linking_atom NZ _pdbx_modification_feature.modified_residue_id LYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id RET _pdbx_modification_feature.type Retinoylation _pdbx_modification_feature.category Lipid/lipid-like # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A RET 301 ? 13 'BINDING SITE FOR RESIDUE RET A 301' AC2 Software A LI1 701 ? 11 'BINDING SITE FOR RESIDUE LI1 A 701' AC3 Software A LI1 702 ? 13 'BINDING SITE FOR RESIDUE LI1 A 702' AC4 Software A LI1 703 ? 6 'BINDING SITE FOR RESIDUE LI1 A 703' AC5 Software A LI1 710 ? 3 'BINDING SITE FOR RESIDUE LI1 A 710' AC6 Software A LI1 711 ? 5 'BINDING SITE FOR RESIDUE LI1 A 711' AC7 Software A LI1 712 ? 10 'BINDING SITE FOR RESIDUE LI1 A 712' AC8 Software A LI1 713 ? 6 'BINDING SITE FOR RESIDUE LI1 A 713' AC9 Software A LI1 722 ? 4 'BINDING SITE FOR RESIDUE LI1 A 722' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 TYR A 83 ? TYR A 83 . ? 1_555 ? 2 AC1 13 TRP A 86 ? TRP A 86 . ? 1_555 ? 3 AC1 13 THR A 89 ? THR A 89 . ? 1_555 ? 4 AC1 13 THR A 90 ? THR A 90 . ? 1_555 ? 5 AC1 13 LEU A 93 ? LEU A 93 . ? 1_555 ? 6 AC1 13 MET A 118 ? MET A 118 . ? 1_555 ? 7 AC1 13 SER A 141 ? SER A 141 . ? 1_555 ? 8 AC1 13 THR A 142 ? THR A 142 . ? 1_555 ? 9 AC1 13 TRP A 182 ? TRP A 182 . ? 1_555 ? 10 AC1 13 TYR A 185 ? TYR A 185 . ? 1_555 ? 11 AC1 13 PRO A 186 ? PRO A 186 . ? 1_555 ? 12 AC1 13 TRP A 189 ? TRP A 189 . ? 1_555 ? 13 AC1 13 LYS A 216 ? LYS A 216 . ? 1_555 ? 14 AC2 11 PHE A 88 ? PHE A 88 . ? 8_555 ? 15 AC2 11 LEU A 99 ? LEU A 99 . ? 8_555 ? 16 AC2 11 GLN A 105 ? GLN A 105 . ? 8_555 ? 17 AC2 11 ILE A 108 ? ILE A 108 . ? 8_555 ? 18 AC2 11 VAL A 112 ? VAL A 112 . ? 8_555 ? 19 AC2 11 ALA A 184 ? ALA A 184 . ? 1_555 ? 20 AC2 11 VAL A 187 ? VAL A 187 . ? 1_555 ? 21 AC2 11 ILE A 191 ? ILE A 191 . ? 1_555 ? 22 AC2 11 ILE A 198 ? ILE A 198 . ? 1_555 ? 23 AC2 11 VAL A 199 ? VAL A 199 . ? 1_555 ? 24 AC2 11 ILE A 203 ? ILE A 203 . ? 1_555 ? 25 AC3 13 ILE A 52 ? ILE A 52 . ? 1_555 ? 26 AC3 13 MET A 56 ? MET A 56 . ? 1_555 ? 27 AC3 13 TRP A 80 ? TRP A 80 . ? 1_555 ? 28 AC3 13 ALA A 81 ? ALA A 81 . ? 1_555 ? 29 AC3 13 ALA A 84 ? ALA A 84 . ? 1_555 ? 30 AC3 13 PHE A 88 ? PHE A 88 . ? 1_555 ? 31 AC3 13 PHE A 153 ? PHE A 153 . ? 8_455 ? 32 AC3 13 ARG A 175 ? ARG A 175 . ? 8_455 ? 33 AC3 13 ASN A 176 ? ASN A 176 . ? 8_455 ? 34 AC3 13 VAL A 179 ? VAL A 179 . ? 8_455 ? 35 AC3 13 VAL A 180 ? VAL A 180 . ? 8_455 ? 36 AC3 13 SER A 183 ? SER A 183 . ? 8_455 ? 37 AC3 13 LI1 E . ? LI1 A 703 . ? 1_555 ? 38 AC4 6 SER A 59 ? SER A 59 . ? 1_555 ? 39 AC4 6 LEU A 146 ? LEU A 146 . ? 8_455 ? 40 AC4 6 LEU A 149 ? LEU A 149 . ? 8_455 ? 41 AC4 6 TYR A 150 ? TYR A 150 . ? 8_455 ? 42 AC4 6 PHE A 153 ? PHE A 153 . ? 8_455 ? 43 AC4 6 LI1 D . ? LI1 A 702 . ? 1_555 ? 44 AC5 3 VAL A 173 ? VAL A 173 . ? 1_555 ? 45 AC5 3 ASN A 176 ? ASN A 176 . ? 1_555 ? 46 AC5 3 LEU A 181 ? LEU A 181 . ? 1_555 ? 47 AC6 5 TRP A 80 ? TRP A 80 . ? 8_555 ? 48 AC6 5 TYR A 83 ? TYR A 83 . ? 8_555 ? 49 AC6 5 LEU A 87 ? LEU A 87 . ? 8_555 ? 50 AC6 5 LEU A 123 ? LEU A 123 . ? 8_555 ? 51 AC6 5 ASN A 176 ? ASN A 176 . ? 1_555 ? 52 AC7 10 LEU A 48 ? LEU A 48 . ? 8_555 ? 53 AC7 10 TYR A 131 ? TYR A 131 . ? 1_555 ? 54 AC7 10 ARG A 134 ? ARG A 134 . ? 1_555 ? 55 AC7 10 PHE A 135 ? PHE A 135 . ? 1_555 ? 56 AC7 10 TRP A 138 ? TRP A 138 . ? 1_555 ? 57 AC7 10 THR A 142 ? THR A 142 . ? 1_555 ? 58 AC7 10 LEU A 190 ? LEU A 190 . ? 1_555 ? 59 AC7 10 GLU A 194 ? GLU A 194 . ? 1_555 ? 60 AC7 10 GLY A 195 ? GLY A 195 . ? 1_555 ? 61 AC7 10 LI1 J . ? LI1 A 722 . ? 1_555 ? 62 AC8 6 LEU A 28 ? LEU A 28 . ? 6_655 ? 63 AC8 6 MET A 32 ? MET A 32 . ? 8_555 ? 64 AC8 6 TYR A 131 ? TYR A 131 . ? 1_555 ? 65 AC8 6 SER A 132 ? SER A 132 . ? 1_555 ? 66 AC8 6 PHE A 135 ? PHE A 135 . ? 1_555 ? 67 AC8 6 VAL A 136 ? VAL A 136 . ? 1_555 ? 68 AC9 4 ALA A 44 ? ALA A 44 . ? 8_555 ? 69 AC9 4 ALA A 51 ? ALA A 51 . ? 8_555 ? 70 AC9 4 TYR A 131 ? TYR A 131 . ? 1_555 ? 71 AC9 4 LI1 H . ? LI1 A 712 . ? 1_555 ? # _pdbx_entry_details.entry_id 1JV6 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C43 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id LI1 _pdbx_validate_chiral.auth_seq_id 701 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 1 ? A GLN 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A GLN 3 ? A GLN 3 4 1 Y 1 A ILE 4 ? A ILE 4 5 1 Y 1 A THR 5 ? A THR 5 6 1 Y 1 A GLY 6 ? A GLY 6 7 1 Y 1 A ARG 7 ? A ARG 7 8 1 Y 1 A PRO 8 ? A PRO 8 9 1 Y 1 A TYR 64 ? A TYR 64 10 1 Y 1 A GLY 65 ? A GLY 65 11 1 Y 1 A LEU 66 ? A LEU 66 12 1 Y 1 A THR 67 ? A THR 67 13 1 Y 1 A MET 68 ? A MET 68 14 1 Y 1 A VAL 69 ? A VAL 69 15 1 Y 1 A PRO 70 ? A PRO 70 16 1 Y 1 A PHE 71 ? A PHE 71 17 1 Y 1 A GLY 72 ? A GLY 72 18 1 Y 1 A GLY 73 ? A GLY 73 19 1 Y 1 A GLU 74 ? A GLU 74 20 1 Y 1 A GLN 75 ? A GLN 75 21 1 Y 1 A ASN 76 ? A ASN 76 22 1 Y 1 A PRO 77 ? A PRO 77 23 1 Y 1 A GLY 231 ? A GLY 231 24 1 Y 1 A GLU 232 ? A GLU 232 25 1 Y 1 A ALA 233 ? A ALA 233 26 1 Y 1 A GLU 234 ? A GLU 234 27 1 Y 1 A ALA 235 ? A ALA 235 28 1 Y 1 A PRO 236 ? A PRO 236 29 1 Y 1 A GLU 237 ? A GLU 237 30 1 Y 1 A PRO 238 ? A PRO 238 31 1 Y 1 A SER 239 ? A SER 239 32 1 Y 1 A ALA 240 ? A ALA 240 33 1 Y 1 A GLY 241 ? A GLY 241 34 1 Y 1 A ASP 242 ? A ASP 242 35 1 Y 1 A GLY 243 ? A GLY 243 36 1 Y 1 A ALA 244 ? A ALA 244 37 1 Y 1 A ALA 245 ? A ALA 245 38 1 Y 1 A ALA 246 ? A ALA 246 39 1 Y 1 A THR 247 ? A THR 247 40 1 Y 1 A SER 248 ? A SER 248 41 1 Y 1 A ASP 249 ? A ASP 249 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 ILE N N N N 126 ILE CA C N S 127 ILE C C N N 128 ILE O O N N 129 ILE CB C N S 130 ILE CG1 C N N 131 ILE CG2 C N N 132 ILE CD1 C N N 133 ILE OXT O N N 134 ILE H H N N 135 ILE H2 H N N 136 ILE HA H N N 137 ILE HB H N N 138 ILE HG12 H N N 139 ILE HG13 H N N 140 ILE HG21 H N N 141 ILE HG22 H N N 142 ILE HG23 H N N 143 ILE HD11 H N N 144 ILE HD12 H N N 145 ILE HD13 H N N 146 ILE HXT H N N 147 LEU N N N N 148 LEU CA C N S 149 LEU C C N N 150 LEU O O N N 151 LEU CB C N N 152 LEU CG C N N 153 LEU CD1 C N N 154 LEU CD2 C N N 155 LEU OXT O N N 156 LEU H H N N 157 LEU H2 H N N 158 LEU HA H N N 159 LEU HB2 H N N 160 LEU HB3 H N N 161 LEU HG H N N 162 LEU HD11 H N N 163 LEU HD12 H N N 164 LEU HD13 H N N 165 LEU HD21 H N N 166 LEU HD22 H N N 167 LEU HD23 H N N 168 LEU HXT H N N 169 LI1 C1 C N N 170 LI1 C2 C N R 171 LI1 C3 C N N 172 LI1 O1 O N N 173 LI1 O2 O N N 174 LI1 O3 O N N 175 LI1 C41 C N N 176 LI1 C42 C N N 177 LI1 C43 C N R 178 LI1 C44 C N N 179 LI1 C45 C N N 180 LI1 C46 C N N 181 LI1 C47 C N N 182 LI1 C48 C N R 183 LI1 C49 C N N 184 LI1 C50 C N N 185 LI1 C51 C N N 186 LI1 C52 C N N 187 LI1 C53 C N N 188 LI1 C55 C N N 189 LI1 C56 C N N 190 LI1 C57 C N N 191 LI1 C58 C N N 192 LI1 C59 C N N 193 LI1 C60 C N N 194 LI1 C11 C N N 195 LI1 C12 C N N 196 LI1 C13 C N S 197 LI1 C14 C N N 198 LI1 C15 C N N 199 LI1 C16 C N N 200 LI1 C17 C N N 201 LI1 C18 C N R 202 LI1 C19 C N N 203 LI1 C20 C N N 204 LI1 C21 C N N 205 LI1 C22 C N N 206 LI1 C23 C N S 207 LI1 C24 C N N 208 LI1 C25 C N N 209 LI1 C26 C N N 210 LI1 C27 C N N 211 LI1 C28 C N N 212 LI1 C29 C N N 213 LI1 C30 C N N 214 LI1 H11 H N N 215 LI1 H12 H N N 216 LI1 H2 H N N 217 LI1 H31 H N N 218 LI1 H32 H N N 219 LI1 HO3 H N N 220 LI1 H411 H N N 221 LI1 H412 H N N 222 LI1 H421 H N N 223 LI1 H422 H N N 224 LI1 H43 H N N 225 LI1 H441 H N N 226 LI1 H442 H N N 227 LI1 H443 H N N 228 LI1 H451 H N N 229 LI1 H452 H N N 230 LI1 H461 H N N 231 LI1 H462 H N N 232 LI1 H471 H N N 233 LI1 H472 H N N 234 LI1 H48 H N N 235 LI1 H491 H N N 236 LI1 H492 H N N 237 LI1 H493 H N N 238 LI1 H501 H N N 239 LI1 H502 H N N 240 LI1 H511 H N N 241 LI1 H512 H N N 242 LI1 H521 H N N 243 LI1 H522 H N N 244 LI1 H531 H N N 245 LI1 H532 H N N 246 LI1 H551 H N N 247 LI1 H552 H N N 248 LI1 H561 H N N 249 LI1 H562 H N N 250 LI1 H571 H N N 251 LI1 H572 H N N 252 LI1 H58 H N N 253 LI1 H591 H N N 254 LI1 H592 H N N 255 LI1 H593 H N N 256 LI1 H601 H N N 257 LI1 H602 H N N 258 LI1 H603 H N N 259 LI1 H111 H N N 260 LI1 H112 H N N 261 LI1 H121 H N N 262 LI1 H122 H N N 263 LI1 H13 H N N 264 LI1 H141 H N N 265 LI1 H142 H N N 266 LI1 H143 H N N 267 LI1 H151 H N N 268 LI1 H152 H N N 269 LI1 H161 H N N 270 LI1 H162 H N N 271 LI1 H171 H N N 272 LI1 H172 H N N 273 LI1 H18 H N N 274 LI1 H191 H N N 275 LI1 H192 H N N 276 LI1 H193 H N N 277 LI1 H201 H N N 278 LI1 H202 H N N 279 LI1 H211 H N N 280 LI1 H212 H N N 281 LI1 H221 H N N 282 LI1 H222 H N N 283 LI1 H23 H N N 284 LI1 H241 H N N 285 LI1 H242 H N N 286 LI1 H243 H N N 287 LI1 H251 H N N 288 LI1 H252 H N N 289 LI1 H261 H N N 290 LI1 H262 H N N 291 LI1 H271 H N N 292 LI1 H272 H N N 293 LI1 H28 H N N 294 LI1 H291 H N N 295 LI1 H292 H N N 296 LI1 H293 H N N 297 LI1 H301 H N N 298 LI1 H302 H N N 299 LI1 H303 H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 PHE N N N N 346 PHE CA C N S 347 PHE C C N N 348 PHE O O N N 349 PHE CB C N N 350 PHE CG C Y N 351 PHE CD1 C Y N 352 PHE CD2 C Y N 353 PHE CE1 C Y N 354 PHE CE2 C Y N 355 PHE CZ C Y N 356 PHE OXT O N N 357 PHE H H N N 358 PHE H2 H N N 359 PHE HA H N N 360 PHE HB2 H N N 361 PHE HB3 H N N 362 PHE HD1 H N N 363 PHE HD2 H N N 364 PHE HE1 H N N 365 PHE HE2 H N N 366 PHE HZ H N N 367 PHE HXT H N N 368 PRO N N N N 369 PRO CA C N S 370 PRO C C N N 371 PRO O O N N 372 PRO CB C N N 373 PRO CG C N N 374 PRO CD C N N 375 PRO OXT O N N 376 PRO H H N N 377 PRO HA H N N 378 PRO HB2 H N N 379 PRO HB3 H N N 380 PRO HG2 H N N 381 PRO HG3 H N N 382 PRO HD2 H N N 383 PRO HD3 H N N 384 PRO HXT H N N 385 RET C1 C N N 386 RET C2 C N N 387 RET C3 C N N 388 RET C4 C N N 389 RET C5 C N N 390 RET C6 C N N 391 RET C7 C N N 392 RET C8 C N N 393 RET C9 C N N 394 RET C10 C N N 395 RET C11 C N N 396 RET C12 C N N 397 RET C13 C N N 398 RET C14 C N N 399 RET C15 C N N 400 RET O1 O N N 401 RET C16 C N N 402 RET C17 C N N 403 RET C18 C N N 404 RET C19 C N N 405 RET C20 C N N 406 RET H21 H N N 407 RET H22 H N N 408 RET H31 H N N 409 RET H32 H N N 410 RET H41 H N N 411 RET H42 H N N 412 RET H7 H N N 413 RET H8 H N N 414 RET H10 H N N 415 RET H11 H N N 416 RET H12 H N N 417 RET H14 H N N 418 RET H15 H N N 419 RET H161 H N N 420 RET H162 H N N 421 RET H163 H N N 422 RET H171 H N N 423 RET H172 H N N 424 RET H173 H N N 425 RET H181 H N N 426 RET H182 H N N 427 RET H183 H N N 428 RET H191 H N N 429 RET H192 H N N 430 RET H193 H N N 431 RET H201 H N N 432 RET H202 H N N 433 RET H203 H N N 434 SER N N N N 435 SER CA C N S 436 SER C C N N 437 SER O O N N 438 SER CB C N N 439 SER OG O N N 440 SER OXT O N N 441 SER H H N N 442 SER H2 H N N 443 SER HA H N N 444 SER HB2 H N N 445 SER HB3 H N N 446 SER HG H N N 447 SER HXT H N N 448 THR N N N N 449 THR CA C N S 450 THR C C N N 451 THR O O N N 452 THR CB C N R 453 THR OG1 O N N 454 THR CG2 C N N 455 THR OXT O N N 456 THR H H N N 457 THR H2 H N N 458 THR HA H N N 459 THR HB H N N 460 THR HG1 H N N 461 THR HG21 H N N 462 THR HG22 H N N 463 THR HG23 H N N 464 THR HXT H N N 465 TRP N N N N 466 TRP CA C N S 467 TRP C C N N 468 TRP O O N N 469 TRP CB C N N 470 TRP CG C Y N 471 TRP CD1 C Y N 472 TRP CD2 C Y N 473 TRP NE1 N Y N 474 TRP CE2 C Y N 475 TRP CE3 C Y N 476 TRP CZ2 C Y N 477 TRP CZ3 C Y N 478 TRP CH2 C Y N 479 TRP OXT O N N 480 TRP H H N N 481 TRP H2 H N N 482 TRP HA H N N 483 TRP HB2 H N N 484 TRP HB3 H N N 485 TRP HD1 H N N 486 TRP HE1 H N N 487 TRP HE3 H N N 488 TRP HZ2 H N N 489 TRP HZ3 H N N 490 TRP HH2 H N N 491 TRP HXT H N N 492 TYR N N N N 493 TYR CA C N S 494 TYR C C N N 495 TYR O O N N 496 TYR CB C N N 497 TYR CG C Y N 498 TYR CD1 C Y N 499 TYR CD2 C Y N 500 TYR CE1 C Y N 501 TYR CE2 C Y N 502 TYR CZ C Y N 503 TYR OH O N N 504 TYR OXT O N N 505 TYR H H N N 506 TYR H2 H N N 507 TYR HA H N N 508 TYR HB2 H N N 509 TYR HB3 H N N 510 TYR HD1 H N N 511 TYR HD2 H N N 512 TYR HE1 H N N 513 TYR HE2 H N N 514 TYR HH H N N 515 TYR HXT H N N 516 VAL N N N N 517 VAL CA C N S 518 VAL C C N N 519 VAL O O N N 520 VAL CB C N N 521 VAL CG1 C N N 522 VAL CG2 C N N 523 VAL OXT O N N 524 VAL H H N N 525 VAL H2 H N N 526 VAL HA H N N 527 VAL HB H N N 528 VAL HG11 H N N 529 VAL HG12 H N N 530 VAL HG13 H N N 531 VAL HG21 H N N 532 VAL HG22 H N N 533 VAL HG23 H N N 534 VAL HXT H N N 535 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 LEU N CA sing N N 139 LEU N H sing N N 140 LEU N H2 sing N N 141 LEU CA C sing N N 142 LEU CA CB sing N N 143 LEU CA HA sing N N 144 LEU C O doub N N 145 LEU C OXT sing N N 146 LEU CB CG sing N N 147 LEU CB HB2 sing N N 148 LEU CB HB3 sing N N 149 LEU CG CD1 sing N N 150 LEU CG CD2 sing N N 151 LEU CG HG sing N N 152 LEU CD1 HD11 sing N N 153 LEU CD1 HD12 sing N N 154 LEU CD1 HD13 sing N N 155 LEU CD2 HD21 sing N N 156 LEU CD2 HD22 sing N N 157 LEU CD2 HD23 sing N N 158 LEU OXT HXT sing N N 159 LI1 C1 C2 sing N N 160 LI1 C1 O1 sing N N 161 LI1 C1 H11 sing N N 162 LI1 C1 H12 sing N N 163 LI1 C2 C3 sing N N 164 LI1 C2 O2 sing N N 165 LI1 C2 H2 sing N N 166 LI1 C3 O3 sing N N 167 LI1 C3 H31 sing N N 168 LI1 C3 H32 sing N N 169 LI1 O1 C11 sing N N 170 LI1 O2 C41 sing N N 171 LI1 O3 HO3 sing N N 172 LI1 C41 C42 sing N N 173 LI1 C41 H411 sing N N 174 LI1 C41 H412 sing N N 175 LI1 C42 C43 sing N N 176 LI1 C42 H421 sing N N 177 LI1 C42 H422 sing N N 178 LI1 C43 C44 sing N N 179 LI1 C43 C45 sing N N 180 LI1 C43 H43 sing N N 181 LI1 C44 H441 sing N N 182 LI1 C44 H442 sing N N 183 LI1 C44 H443 sing N N 184 LI1 C45 C46 sing N N 185 LI1 C45 H451 sing N N 186 LI1 C45 H452 sing N N 187 LI1 C46 C47 sing N N 188 LI1 C46 H461 sing N N 189 LI1 C46 H462 sing N N 190 LI1 C47 C48 sing N N 191 LI1 C47 H471 sing N N 192 LI1 C47 H472 sing N N 193 LI1 C48 C49 sing N N 194 LI1 C48 C50 sing N N 195 LI1 C48 H48 sing N N 196 LI1 C49 H491 sing N N 197 LI1 C49 H492 sing N N 198 LI1 C49 H493 sing N N 199 LI1 C50 C51 sing N N 200 LI1 C50 H501 sing N N 201 LI1 C50 H502 sing N N 202 LI1 C51 C52 sing N N 203 LI1 C51 H511 sing N N 204 LI1 C51 H512 sing N N 205 LI1 C52 C53 sing N N 206 LI1 C52 H521 sing N N 207 LI1 C52 H522 sing N N 208 LI1 C53 C55 sing N N 209 LI1 C53 H531 sing N N 210 LI1 C53 H532 sing N N 211 LI1 C55 C56 sing N N 212 LI1 C55 H551 sing N N 213 LI1 C55 H552 sing N N 214 LI1 C56 C57 sing N N 215 LI1 C56 H561 sing N N 216 LI1 C56 H562 sing N N 217 LI1 C57 C58 sing N N 218 LI1 C57 H571 sing N N 219 LI1 C57 H572 sing N N 220 LI1 C58 C59 sing N N 221 LI1 C58 C60 sing N N 222 LI1 C58 H58 sing N N 223 LI1 C59 H591 sing N N 224 LI1 C59 H592 sing N N 225 LI1 C59 H593 sing N N 226 LI1 C60 H601 sing N N 227 LI1 C60 H602 sing N N 228 LI1 C60 H603 sing N N 229 LI1 C11 C12 sing N N 230 LI1 C11 H111 sing N N 231 LI1 C11 H112 sing N N 232 LI1 C12 C13 sing N N 233 LI1 C12 H121 sing N N 234 LI1 C12 H122 sing N N 235 LI1 C13 C14 sing N N 236 LI1 C13 C15 sing N N 237 LI1 C13 H13 sing N N 238 LI1 C14 H141 sing N N 239 LI1 C14 H142 sing N N 240 LI1 C14 H143 sing N N 241 LI1 C15 C16 sing N N 242 LI1 C15 H151 sing N N 243 LI1 C15 H152 sing N N 244 LI1 C16 C17 sing N N 245 LI1 C16 H161 sing N N 246 LI1 C16 H162 sing N N 247 LI1 C17 C18 sing N N 248 LI1 C17 H171 sing N N 249 LI1 C17 H172 sing N N 250 LI1 C18 C19 sing N N 251 LI1 C18 C20 sing N N 252 LI1 C18 H18 sing N N 253 LI1 C19 H191 sing N N 254 LI1 C19 H192 sing N N 255 LI1 C19 H193 sing N N 256 LI1 C20 C21 sing N N 257 LI1 C20 H201 sing N N 258 LI1 C20 H202 sing N N 259 LI1 C21 C22 sing N N 260 LI1 C21 H211 sing N N 261 LI1 C21 H212 sing N N 262 LI1 C22 C23 sing N N 263 LI1 C22 H221 sing N N 264 LI1 C22 H222 sing N N 265 LI1 C23 C24 sing N N 266 LI1 C23 C25 sing N N 267 LI1 C23 H23 sing N N 268 LI1 C24 H241 sing N N 269 LI1 C24 H242 sing N N 270 LI1 C24 H243 sing N N 271 LI1 C25 C26 sing N N 272 LI1 C25 H251 sing N N 273 LI1 C25 H252 sing N N 274 LI1 C26 C27 sing N N 275 LI1 C26 H261 sing N N 276 LI1 C26 H262 sing N N 277 LI1 C27 C28 sing N N 278 LI1 C27 H271 sing N N 279 LI1 C27 H272 sing N N 280 LI1 C28 C29 sing N N 281 LI1 C28 C30 sing N N 282 LI1 C28 H28 sing N N 283 LI1 C29 H291 sing N N 284 LI1 C29 H292 sing N N 285 LI1 C29 H293 sing N N 286 LI1 C30 H301 sing N N 287 LI1 C30 H302 sing N N 288 LI1 C30 H303 sing N N 289 LYS N CA sing N N 290 LYS N H sing N N 291 LYS N H2 sing N N 292 LYS CA C sing N N 293 LYS CA CB sing N N 294 LYS CA HA sing N N 295 LYS C O doub N N 296 LYS C OXT sing N N 297 LYS CB CG sing N N 298 LYS CB HB2 sing N N 299 LYS CB HB3 sing N N 300 LYS CG CD sing N N 301 LYS CG HG2 sing N N 302 LYS CG HG3 sing N N 303 LYS CD CE sing N N 304 LYS CD HD2 sing N N 305 LYS CD HD3 sing N N 306 LYS CE NZ sing N N 307 LYS CE HE2 sing N N 308 LYS CE HE3 sing N N 309 LYS NZ HZ1 sing N N 310 LYS NZ HZ2 sing N N 311 LYS NZ HZ3 sing N N 312 LYS OXT HXT sing N N 313 MET N CA sing N N 314 MET N H sing N N 315 MET N H2 sing N N 316 MET CA C sing N N 317 MET CA CB sing N N 318 MET CA HA sing N N 319 MET C O doub N N 320 MET C OXT sing N N 321 MET CB CG sing N N 322 MET CB HB2 sing N N 323 MET CB HB3 sing N N 324 MET CG SD sing N N 325 MET CG HG2 sing N N 326 MET CG HG3 sing N N 327 MET SD CE sing N N 328 MET CE HE1 sing N N 329 MET CE HE2 sing N N 330 MET CE HE3 sing N N 331 MET OXT HXT sing N N 332 PHE N CA sing N N 333 PHE N H sing N N 334 PHE N H2 sing N N 335 PHE CA C sing N N 336 PHE CA CB sing N N 337 PHE CA HA sing N N 338 PHE C O doub N N 339 PHE C OXT sing N N 340 PHE CB CG sing N N 341 PHE CB HB2 sing N N 342 PHE CB HB3 sing N N 343 PHE CG CD1 doub Y N 344 PHE CG CD2 sing Y N 345 PHE CD1 CE1 sing Y N 346 PHE CD1 HD1 sing N N 347 PHE CD2 CE2 doub Y N 348 PHE CD2 HD2 sing N N 349 PHE CE1 CZ doub Y N 350 PHE CE1 HE1 sing N N 351 PHE CE2 CZ sing Y N 352 PHE CE2 HE2 sing N N 353 PHE CZ HZ sing N N 354 PHE OXT HXT sing N N 355 PRO N CA sing N N 356 PRO N CD sing N N 357 PRO N H sing N N 358 PRO CA C sing N N 359 PRO CA CB sing N N 360 PRO CA HA sing N N 361 PRO C O doub N N 362 PRO C OXT sing N N 363 PRO CB CG sing N N 364 PRO CB HB2 sing N N 365 PRO CB HB3 sing N N 366 PRO CG CD sing N N 367 PRO CG HG2 sing N N 368 PRO CG HG3 sing N N 369 PRO CD HD2 sing N N 370 PRO CD HD3 sing N N 371 PRO OXT HXT sing N N 372 RET C1 C2 sing N N 373 RET C1 C6 sing N N 374 RET C1 C16 sing N N 375 RET C1 C17 sing N N 376 RET C2 C3 sing N N 377 RET C2 H21 sing N N 378 RET C2 H22 sing N N 379 RET C3 C4 sing N N 380 RET C3 H31 sing N N 381 RET C3 H32 sing N N 382 RET C4 C5 sing N N 383 RET C4 H41 sing N N 384 RET C4 H42 sing N N 385 RET C5 C6 doub N N 386 RET C5 C18 sing N N 387 RET C6 C7 sing N N 388 RET C7 C8 doub N E 389 RET C7 H7 sing N N 390 RET C8 C9 sing N N 391 RET C8 H8 sing N N 392 RET C9 C10 doub N E 393 RET C9 C19 sing N N 394 RET C10 C11 sing N N 395 RET C10 H10 sing N N 396 RET C11 C12 doub N E 397 RET C11 H11 sing N N 398 RET C12 C13 sing N N 399 RET C12 H12 sing N N 400 RET C13 C14 doub N E 401 RET C13 C20 sing N N 402 RET C14 C15 sing N N 403 RET C14 H14 sing N N 404 RET C15 O1 doub N N 405 RET C15 H15 sing N N 406 RET C16 H161 sing N N 407 RET C16 H162 sing N N 408 RET C16 H163 sing N N 409 RET C17 H171 sing N N 410 RET C17 H172 sing N N 411 RET C17 H173 sing N N 412 RET C18 H181 sing N N 413 RET C18 H182 sing N N 414 RET C18 H183 sing N N 415 RET C19 H191 sing N N 416 RET C19 H192 sing N N 417 RET C19 H193 sing N N 418 RET C20 H201 sing N N 419 RET C20 H202 sing N N 420 RET C20 H203 sing N N 421 SER N CA sing N N 422 SER N H sing N N 423 SER N H2 sing N N 424 SER CA C sing N N 425 SER CA CB sing N N 426 SER CA HA sing N N 427 SER C O doub N N 428 SER C OXT sing N N 429 SER CB OG sing N N 430 SER CB HB2 sing N N 431 SER CB HB3 sing N N 432 SER OG HG sing N N 433 SER OXT HXT sing N N 434 THR N CA sing N N 435 THR N H sing N N 436 THR N H2 sing N N 437 THR CA C sing N N 438 THR CA CB sing N N 439 THR CA HA sing N N 440 THR C O doub N N 441 THR C OXT sing N N 442 THR CB OG1 sing N N 443 THR CB CG2 sing N N 444 THR CB HB sing N N 445 THR OG1 HG1 sing N N 446 THR CG2 HG21 sing N N 447 THR CG2 HG22 sing N N 448 THR CG2 HG23 sing N N 449 THR OXT HXT sing N N 450 TRP N CA sing N N 451 TRP N H sing N N 452 TRP N H2 sing N N 453 TRP CA C sing N N 454 TRP CA CB sing N N 455 TRP CA HA sing N N 456 TRP C O doub N N 457 TRP C OXT sing N N 458 TRP CB CG sing N N 459 TRP CB HB2 sing N N 460 TRP CB HB3 sing N N 461 TRP CG CD1 doub Y N 462 TRP CG CD2 sing Y N 463 TRP CD1 NE1 sing Y N 464 TRP CD1 HD1 sing N N 465 TRP CD2 CE2 doub Y N 466 TRP CD2 CE3 sing Y N 467 TRP NE1 CE2 sing Y N 468 TRP NE1 HE1 sing N N 469 TRP CE2 CZ2 sing Y N 470 TRP CE3 CZ3 doub Y N 471 TRP CE3 HE3 sing N N 472 TRP CZ2 CH2 doub Y N 473 TRP CZ2 HZ2 sing N N 474 TRP CZ3 CH2 sing Y N 475 TRP CZ3 HZ3 sing N N 476 TRP CH2 HH2 sing N N 477 TRP OXT HXT sing N N 478 TYR N CA sing N N 479 TYR N H sing N N 480 TYR N H2 sing N N 481 TYR CA C sing N N 482 TYR CA CB sing N N 483 TYR CA HA sing N N 484 TYR C O doub N N 485 TYR C OXT sing N N 486 TYR CB CG sing N N 487 TYR CB HB2 sing N N 488 TYR CB HB3 sing N N 489 TYR CG CD1 doub Y N 490 TYR CG CD2 sing Y N 491 TYR CD1 CE1 sing Y N 492 TYR CD1 HD1 sing N N 493 TYR CD2 CE2 doub Y N 494 TYR CD2 HD2 sing N N 495 TYR CE1 CZ doub Y N 496 TYR CE1 HE1 sing N N 497 TYR CE2 CZ sing Y N 498 TYR CE2 HE2 sing N N 499 TYR CZ OH sing N N 500 TYR OH HH sing N N 501 TYR OXT HXT sing N N 502 VAL N CA sing N N 503 VAL N H sing N N 504 VAL N H2 sing N N 505 VAL CA C sing N N 506 VAL CA CB sing N N 507 VAL CA HA sing N N 508 VAL C O doub N N 509 VAL C OXT sing N N 510 VAL CB CG1 sing N N 511 VAL CB CG2 sing N N 512 VAL CB HB sing N N 513 VAL CG1 HG11 sing N N 514 VAL CG1 HG12 sing N N 515 VAL CG1 HG13 sing N N 516 VAL CG2 HG21 sing N N 517 VAL CG2 HG22 sing N N 518 VAL CG2 HG23 sing N N 519 VAL OXT HXT sing N N 520 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1JV7 _pdbx_initial_refinement_model.details 'PDB ENTRY 1JV7 (Bacteriorhodopsin D85S coordinates, without diether lipids nor water)' # _atom_sites.entry_id 1JV6 _atom_sites.fract_transf_matrix[1][1] 0.019305 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008244 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011669 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_