HEADER GENE REGULATION 17-SEP-01 1JZR TITLE URE2P IN COMPLEX WITH GLUTATHIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: URE2 PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NITRATE ASSIMILATION, STRUCTURAL GENOMICS, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR L.BOUSSET,H.BELRHALI,R.MELKI,S.MORERA REVDAT 4 16-AUG-23 1JZR 1 REMARK REVDAT 3 21-DEC-11 1JZR 1 FORMUL HET VERSN REVDAT 2 24-FEB-09 1JZR 1 VERSN REVDAT 1 21-DEC-01 1JZR 0 JRNL AUTH L.BOUSSET,H.BELRHALI,R.MELKI,S.MORERA JRNL TITL CRYSTAL STRUCTURES OF THE YEAST PRION URE2P FUNCTIONAL JRNL TITL 2 REGION IN COMPLEX WITH GLUTATHIONE AND RELATED COMPOUNDS. JRNL REF BIOCHEMISTRY V. 40 13564 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11695904 JRNL DOI 10.1021/BI011007B REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.BOUSSET,H.BELRHALI,J.JANIN,R.MELKI,S.MORERA REMARK 1 TITL STRUCTURE OF THE GLOBULAR REGION OF THE PRION PROTEIN URE2 REMARK 1 TITL 2 FROM THE YEAST SACCHAROMYCES CEREVISIAE REMARK 1 REF STRUCTURE V. 9 39 2001 REMARK 1 REFN ISSN 0969-2126 REMARK 1 DOI 10.1016/S0969-2126(00)00553-0 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 24911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 20.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8057 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.09900 REMARK 3 B22 (A**2) : -5.44800 REMARK 3 B33 (A**2) : 0.34900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.330 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.181 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.965 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.690 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.605 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : GTT_XPLOR.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JZR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-01. REMARK 100 THE DEPOSITION ID IS D_1000014379. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-SEP-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24911 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.27600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1G6W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, PH 8.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.32450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.61900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.48300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.61900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.32450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.48300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 95 REMARK 465 HIS A 96 REMARK 465 VAL A 97 REMARK 465 GLU A 98 REMARK 465 TYR A 99 REMARK 465 THR A 276 REMARK 465 GLU A 277 REMARK 465 ASN A 278 REMARK 465 ALA A 279 REMARK 465 ALA A 280 REMARK 465 ALA A 281 REMARK 465 TYR A 282 REMARK 465 SER A 283 REMARK 465 ALA A 284 REMARK 465 GLY A 285 REMARK 465 THR A 286 REMARK 465 THR A 287 REMARK 465 PRO A 288 REMARK 465 MET A 289 REMARK 465 SER A 290 REMARK 465 GLN A 291 REMARK 465 SER A 292 REMARK 465 ARG A 293 REMARK 465 PHE A 294 REMARK 465 PHE A 295 REMARK 465 GLU A 354 REMARK 465 SER B 95 REMARK 465 HIS B 96 REMARK 465 GLU B 277 REMARK 465 ASN B 278 REMARK 465 ALA B 279 REMARK 465 ALA B 280 REMARK 465 ALA B 281 REMARK 465 TYR B 282 REMARK 465 SER B 283 REMARK 465 ALA B 284 REMARK 465 GLY B 285 REMARK 465 THR B 286 REMARK 465 THR B 287 REMARK 465 PRO B 288 REMARK 465 MET B 289 REMARK 465 SER B 290 REMARK 465 GLN B 291 REMARK 465 GLU B 354 REMARK 465 SER C 95 REMARK 465 HIS C 96 REMARK 465 VAL C 97 REMARK 465 GLU C 98 REMARK 465 TYR C 99 REMARK 465 SER D 95 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 332 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 103 -84.45 -54.01 REMARK 500 LYS A 104 -1.55 -58.47 REMARK 500 GLN A 107 29.98 -146.51 REMARK 500 GLU A 108 63.08 165.42 REMARK 500 ARG A 120 -7.77 -56.11 REMARK 500 ALA A 122 102.30 -54.32 REMARK 500 MET A 173 46.61 -79.13 REMARK 500 PRO A 199 63.41 -66.39 REMARK 500 TRP A 202 -154.77 -129.62 REMARK 500 SER A 238 4.88 -53.75 REMARK 500 VAL A 271 -31.34 -36.52 REMARK 500 MET A 272 49.20 -71.91 REMARK 500 ARG A 322 -7.21 -59.03 REMARK 500 LYS A 349 2.60 -52.20 REMARK 500 ALA A 350 48.16 -167.66 REMARK 500 ARG A 352 21.07 -73.79 REMARK 500 LEU B 111 -70.54 -54.97 REMARK 500 SER B 118 -159.49 -139.08 REMARK 500 MET B 173 48.15 -92.91 REMARK 500 TRP B 202 -162.39 -122.78 REMARK 500 HIS B 223 -70.81 -90.17 REMARK 500 TYR B 235 -31.85 -139.29 REMARK 500 VAL B 271 -71.60 -45.91 REMARK 500 MET B 272 43.26 -70.20 REMARK 500 GLU B 273 28.22 -148.73 REMARK 500 LEU B 274 65.98 153.66 REMARK 500 ASP B 275 19.19 -177.40 REMARK 500 ARG B 293 -42.63 -29.03 REMARK 500 PHE B 294 24.53 -75.05 REMARK 500 ASP B 296 27.95 -143.45 REMARK 500 ASN B 317 -5.23 -49.43 REMARK 500 ALA C 122 109.98 -28.34 REMARK 500 LEU C 148 3.64 -60.53 REMARK 500 MET C 173 66.22 -100.62 REMARK 500 ASP C 174 45.64 39.36 REMARK 500 GLU C 180 105.55 87.43 REMARK 500 LEU C 201 12.18 54.03 REMARK 500 TRP C 202 -142.89 -136.74 REMARK 500 SER C 203 149.55 -170.48 REMARK 500 GLU C 273 -119.67 -77.02 REMARK 500 LEU C 274 -61.89 0.75 REMARK 500 ASP C 275 81.65 -67.84 REMARK 500 GLU C 277 80.90 54.22 REMARK 500 ASN C 278 -17.51 155.82 REMARK 500 ALA C 284 -70.01 -60.86 REMARK 500 VAL C 320 -8.51 -54.19 REMARK 500 TYR D 99 26.80 -150.71 REMARK 500 GLU D 108 51.49 -177.39 REMARK 500 GLU D 112 -166.12 -129.83 REMARK 500 HIS D 151 -3.82 -55.82 REMARK 500 REMARK 500 THIS ENTRY HAS 64 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 355 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH C 356 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1G6W RELATED DB: PDB REMARK 900 URE2P STRUCTURE REMARK 900 RELATED ID: 1K0A RELATED DB: PDB REMARK 900 URE2P IN COMPLEX WITH S-HEXYLGLUTATHIONE REMARK 900 RELATED ID: 1K0B RELATED DB: PDB REMARK 900 URE2P IN COMPLEX WITH GLUTATHIONE REMARK 900 RELATED ID: 1K0C RELATED DB: PDB REMARK 900 URE2P IN COMPLEX WITH S-P-NITROBENZYLGLUTATHIONE REMARK 900 RELATED ID: 1K0D RELATED DB: PDB REMARK 900 URE2P IN COMPLEX WITH GLUTATHIONE DBREF 1JZR A 95 354 UNP P23202 URE2_YEAST 95 354 DBREF 1JZR B 95 354 UNP P23202 URE2_YEAST 95 354 DBREF 1JZR C 95 354 UNP P23202 URE2_YEAST 95 354 DBREF 1JZR D 95 354 UNP P23202 URE2_YEAST 95 354 SEQRES 1 A 260 SER HIS VAL GLU TYR SER ARG ILE THR LYS PHE PHE GLN SEQRES 2 A 260 GLU GLN PRO LEU GLU GLY TYR THR LEU PHE SER HIS ARG SEQRES 3 A 260 SER ALA PRO ASN GLY PHE LYS VAL ALA ILE VAL LEU SER SEQRES 4 A 260 GLU LEU GLY PHE HIS TYR ASN THR ILE PHE LEU ASP PHE SEQRES 5 A 260 ASN LEU GLY GLU HIS ARG ALA PRO GLU PHE VAL SER VAL SEQRES 6 A 260 ASN PRO ASN ALA ARG VAL PRO ALA LEU ILE ASP HIS GLY SEQRES 7 A 260 MET ASP ASN LEU SER ILE TRP GLU SER GLY ALA ILE LEU SEQRES 8 A 260 LEU HIS LEU VAL ASN LYS TYR TYR LYS GLU THR GLY ASN SEQRES 9 A 260 PRO LEU LEU TRP SER ASP ASP LEU ALA ASP GLN SER GLN SEQRES 10 A 260 ILE ASN ALA TRP LEU PHE PHE GLN THR SER GLY HIS ALA SEQRES 11 A 260 PRO MET ILE GLY GLN ALA LEU HIS PHE ARG TYR PHE HIS SEQRES 12 A 260 SER GLN LYS ILE ALA SER ALA VAL GLU ARG TYR THR ASP SEQRES 13 A 260 GLU VAL ARG ARG VAL TYR GLY VAL VAL GLU MET ALA LEU SEQRES 14 A 260 ALA GLU ARG ARG GLU ALA LEU VAL MET GLU LEU ASP THR SEQRES 15 A 260 GLU ASN ALA ALA ALA TYR SER ALA GLY THR THR PRO MET SEQRES 16 A 260 SER GLN SER ARG PHE PHE ASP TYR PRO VAL TRP LEU VAL SEQRES 17 A 260 GLY ASP LYS LEU THR ILE ALA ASP LEU ALA PHE VAL PRO SEQRES 18 A 260 TRP ASN ASN VAL VAL ASP ARG ILE GLY ILE ASN ILE LYS SEQRES 19 A 260 ILE GLU PHE PRO GLU VAL TYR LYS TRP THR LYS HIS MET SEQRES 20 A 260 MET ARG ARG PRO ALA VAL ILE LYS ALA LEU ARG GLY GLU SEQRES 1 B 260 SER HIS VAL GLU TYR SER ARG ILE THR LYS PHE PHE GLN SEQRES 2 B 260 GLU GLN PRO LEU GLU GLY TYR THR LEU PHE SER HIS ARG SEQRES 3 B 260 SER ALA PRO ASN GLY PHE LYS VAL ALA ILE VAL LEU SER SEQRES 4 B 260 GLU LEU GLY PHE HIS TYR ASN THR ILE PHE LEU ASP PHE SEQRES 5 B 260 ASN LEU GLY GLU HIS ARG ALA PRO GLU PHE VAL SER VAL SEQRES 6 B 260 ASN PRO ASN ALA ARG VAL PRO ALA LEU ILE ASP HIS GLY SEQRES 7 B 260 MET ASP ASN LEU SER ILE TRP GLU SER GLY ALA ILE LEU SEQRES 8 B 260 LEU HIS LEU VAL ASN LYS TYR TYR LYS GLU THR GLY ASN SEQRES 9 B 260 PRO LEU LEU TRP SER ASP ASP LEU ALA ASP GLN SER GLN SEQRES 10 B 260 ILE ASN ALA TRP LEU PHE PHE GLN THR SER GLY HIS ALA SEQRES 11 B 260 PRO MET ILE GLY GLN ALA LEU HIS PHE ARG TYR PHE HIS SEQRES 12 B 260 SER GLN LYS ILE ALA SER ALA VAL GLU ARG TYR THR ASP SEQRES 13 B 260 GLU VAL ARG ARG VAL TYR GLY VAL VAL GLU MET ALA LEU SEQRES 14 B 260 ALA GLU ARG ARG GLU ALA LEU VAL MET GLU LEU ASP THR SEQRES 15 B 260 GLU ASN ALA ALA ALA TYR SER ALA GLY THR THR PRO MET SEQRES 16 B 260 SER GLN SER ARG PHE PHE ASP TYR PRO VAL TRP LEU VAL SEQRES 17 B 260 GLY ASP LYS LEU THR ILE ALA ASP LEU ALA PHE VAL PRO SEQRES 18 B 260 TRP ASN ASN VAL VAL ASP ARG ILE GLY ILE ASN ILE LYS SEQRES 19 B 260 ILE GLU PHE PRO GLU VAL TYR LYS TRP THR LYS HIS MET SEQRES 20 B 260 MET ARG ARG PRO ALA VAL ILE LYS ALA LEU ARG GLY GLU SEQRES 1 C 260 SER HIS VAL GLU TYR SER ARG ILE THR LYS PHE PHE GLN SEQRES 2 C 260 GLU GLN PRO LEU GLU GLY TYR THR LEU PHE SER HIS ARG SEQRES 3 C 260 SER ALA PRO ASN GLY PHE LYS VAL ALA ILE VAL LEU SER SEQRES 4 C 260 GLU LEU GLY PHE HIS TYR ASN THR ILE PHE LEU ASP PHE SEQRES 5 C 260 ASN LEU GLY GLU HIS ARG ALA PRO GLU PHE VAL SER VAL SEQRES 6 C 260 ASN PRO ASN ALA ARG VAL PRO ALA LEU ILE ASP HIS GLY SEQRES 7 C 260 MET ASP ASN LEU SER ILE TRP GLU SER GLY ALA ILE LEU SEQRES 8 C 260 LEU HIS LEU VAL ASN LYS TYR TYR LYS GLU THR GLY ASN SEQRES 9 C 260 PRO LEU LEU TRP SER ASP ASP LEU ALA ASP GLN SER GLN SEQRES 10 C 260 ILE ASN ALA TRP LEU PHE PHE GLN THR SER GLY HIS ALA SEQRES 11 C 260 PRO MET ILE GLY GLN ALA LEU HIS PHE ARG TYR PHE HIS SEQRES 12 C 260 SER GLN LYS ILE ALA SER ALA VAL GLU ARG TYR THR ASP SEQRES 13 C 260 GLU VAL ARG ARG VAL TYR GLY VAL VAL GLU MET ALA LEU SEQRES 14 C 260 ALA GLU ARG ARG GLU ALA LEU VAL MET GLU LEU ASP THR SEQRES 15 C 260 GLU ASN ALA ALA ALA TYR SER ALA GLY THR THR PRO MET SEQRES 16 C 260 SER GLN SER ARG PHE PHE ASP TYR PRO VAL TRP LEU VAL SEQRES 17 C 260 GLY ASP LYS LEU THR ILE ALA ASP LEU ALA PHE VAL PRO SEQRES 18 C 260 TRP ASN ASN VAL VAL ASP ARG ILE GLY ILE ASN ILE LYS SEQRES 19 C 260 ILE GLU PHE PRO GLU VAL TYR LYS TRP THR LYS HIS MET SEQRES 20 C 260 MET ARG ARG PRO ALA VAL ILE LYS ALA LEU ARG GLY GLU SEQRES 1 D 260 SER HIS VAL GLU TYR SER ARG ILE THR LYS PHE PHE GLN SEQRES 2 D 260 GLU GLN PRO LEU GLU GLY TYR THR LEU PHE SER HIS ARG SEQRES 3 D 260 SER ALA PRO ASN GLY PHE LYS VAL ALA ILE VAL LEU SER SEQRES 4 D 260 GLU LEU GLY PHE HIS TYR ASN THR ILE PHE LEU ASP PHE SEQRES 5 D 260 ASN LEU GLY GLU HIS ARG ALA PRO GLU PHE VAL SER VAL SEQRES 6 D 260 ASN PRO ASN ALA ARG VAL PRO ALA LEU ILE ASP HIS GLY SEQRES 7 D 260 MET ASP ASN LEU SER ILE TRP GLU SER GLY ALA ILE LEU SEQRES 8 D 260 LEU HIS LEU VAL ASN LYS TYR TYR LYS GLU THR GLY ASN SEQRES 9 D 260 PRO LEU LEU TRP SER ASP ASP LEU ALA ASP GLN SER GLN SEQRES 10 D 260 ILE ASN ALA TRP LEU PHE PHE GLN THR SER GLY HIS ALA SEQRES 11 D 260 PRO MET ILE GLY GLN ALA LEU HIS PHE ARG TYR PHE HIS SEQRES 12 D 260 SER GLN LYS ILE ALA SER ALA VAL GLU ARG TYR THR ASP SEQRES 13 D 260 GLU VAL ARG ARG VAL TYR GLY VAL VAL GLU MET ALA LEU SEQRES 14 D 260 ALA GLU ARG ARG GLU ALA LEU VAL MET GLU LEU ASP THR SEQRES 15 D 260 GLU ASN ALA ALA ALA TYR SER ALA GLY THR THR PRO MET SEQRES 16 D 260 SER GLN SER ARG PHE PHE ASP TYR PRO VAL TRP LEU VAL SEQRES 17 D 260 GLY ASP LYS LEU THR ILE ALA ASP LEU ALA PHE VAL PRO SEQRES 18 D 260 TRP ASN ASN VAL VAL ASP ARG ILE GLY ILE ASN ILE LYS SEQRES 19 D 260 ILE GLU PHE PRO GLU VAL TYR LYS TRP THR LYS HIS MET SEQRES 20 D 260 MET ARG ARG PRO ALA VAL ILE LYS ALA LEU ARG GLY GLU HET GSH A 355 20 HET GSH C 356 20 HETNAM GSH GLUTATHIONE FORMUL 5 GSH 2(C10 H17 N3 O6 S) HELIX 1 1 THR A 103 GLN A 107 5 5 HELIX 2 2 ALA A 122 LEU A 135 1 14 HELIX 3 3 GLY A 149 ARG A 152 5 4 HELIX 4 4 ALA A 153 SER A 158 1 6 HELIX 5 5 GLU A 180 GLY A 197 1 18 HELIX 6 6 ASP A 205 HIS A 223 1 19 HELIX 7 7 HIS A 223 PHE A 236 1 14 HELIX 8 8 ILE A 241 MET A 272 1 32 HELIX 9 9 THR A 307 ALA A 312 1 6 HELIX 10 10 PHE A 313 ASN A 318 1 6 HELIX 11 11 VAL A 319 GLY A 324 5 6 HELIX 12 12 ASN A 326 PHE A 331 1 6 HELIX 13 13 PHE A 331 ARG A 343 1 13 HELIX 14 14 ARG A 344 LYS A 349 1 6 HELIX 15 15 TYR B 99 PHE B 106 1 8 HELIX 16 16 ALA B 122 LEU B 135 1 14 HELIX 17 17 ASP B 145 ALA B 153 5 9 HELIX 18 18 GLU B 155 ASN B 160 1 6 HELIX 19 19 GLU B 180 GLY B 197 1 18 HELIX 20 20 ASP B 205 GLY B 222 1 18 HELIX 21 21 HIS B 223 PHE B 236 1 14 HELIX 22 22 ILE B 241 MET B 272 1 32 HELIX 23 23 SER B 292 TYR B 297 5 6 HELIX 24 24 THR B 307 ALA B 312 1 6 HELIX 25 25 PHE B 313 VAL B 314 5 2 HELIX 26 26 PRO B 315 GLY B 324 5 10 HELIX 27 27 ASN B 326 PHE B 331 1 6 HELIX 28 28 PHE B 331 ARG B 344 1 14 HELIX 29 29 ARG B 344 GLY B 353 1 10 HELIX 30 30 SER C 100 PHE C 106 1 7 HELIX 31 31 ALA C 122 LEU C 135 1 14 HELIX 32 32 GLY C 149 ARG C 152 5 4 HELIX 33 33 ALA C 153 SER C 158 1 6 HELIX 34 34 GLU C 180 GLY C 197 1 18 HELIX 35 35 ASP C 205 HIS C 223 1 19 HELIX 36 36 HIS C 223 PHE C 236 1 14 HELIX 37 37 ILE C 241 GLU C 273 1 33 HELIX 38 38 ASN C 278 GLY C 285 1 8 HELIX 39 39 PRO C 288 SER C 292 5 5 HELIX 40 40 THR C 307 ASN C 318 1 12 HELIX 41 41 VAL C 319 GLY C 324 5 6 HELIX 42 42 ASN C 326 PHE C 331 1 6 HELIX 43 43 PHE C 331 ARG C 344 1 14 HELIX 44 44 ARG C 344 GLY C 353 1 10 HELIX 45 45 TYR D 99 GLN D 107 1 9 HELIX 46 46 ALA D 122 LEU D 135 1 14 HELIX 47 47 ASP D 145 ARG D 152 5 8 HELIX 48 48 ALA D 153 SER D 158 1 6 HELIX 49 49 GLY D 172 ASP D 174 5 3 HELIX 50 50 GLU D 180 GLY D 197 1 18 HELIX 51 51 ASP D 205 HIS D 223 1 19 HELIX 52 52 HIS D 223 PHE D 236 1 14 HELIX 53 53 ILE D 241 LEU D 274 1 34 HELIX 54 54 ASP D 275 GLU D 277 5 3 HELIX 55 55 ASN D 278 ALA D 284 1 7 HELIX 56 56 PRO D 288 SER D 292 5 5 HELIX 57 57 THR D 307 ALA D 312 1 6 HELIX 58 58 PHE D 313 ASN D 318 1 6 HELIX 59 59 ASN D 326 PHE D 331 1 6 HELIX 60 60 PHE D 331 MET D 342 1 12 HELIX 61 61 ARG D 344 LEU D 351 1 8 SHEET 1 A 4 TYR A 139 PHE A 143 0 SHEET 2 A 4 TYR A 114 SER A 118 1 N LEU A 116 O ILE A 142 SHEET 3 A 4 ALA A 167 ASP A 170 -1 O ALA A 167 N PHE A 117 SHEET 4 A 4 LEU A 176 ILE A 178 -1 O LEU A 176 N ASP A 170 SHEET 1 B 4 ASN B 140 PHE B 143 0 SHEET 2 B 4 TYR B 114 SER B 118 1 N LEU B 116 O ILE B 142 SHEET 3 B 4 ALA B 167 ASP B 170 -1 O ALA B 167 N PHE B 117 SHEET 4 B 4 LEU B 176 ILE B 178 -1 O ILE B 178 N LEU B 168 SHEET 1 C 4 TYR C 139 PHE C 143 0 SHEET 2 C 4 TYR C 114 SER C 118 1 N SER C 118 O ILE C 142 SHEET 3 C 4 ALA C 167 ASP C 170 -1 O ALA C 167 N PHE C 117 SHEET 4 C 4 LEU C 176 TRP C 179 -1 O ILE C 178 N LEU C 168 SHEET 1 D 4 TYR D 139 PHE D 143 0 SHEET 2 D 4 TYR D 114 SER D 118 1 N SER D 118 O ILE D 142 SHEET 3 D 4 ALA D 167 ASP D 170 -1 O ALA D 167 N PHE D 117 SHEET 4 D 4 LEU D 176 ILE D 178 -1 O LEU D 176 N ASP D 170 CISPEP 1 VAL A 165 PRO A 166 0 0.15 CISPEP 2 VAL B 165 PRO B 166 0 0.13 CISPEP 3 VAL C 165 PRO C 166 0 0.04 CISPEP 4 VAL D 165 PRO D 166 0 0.16 SITE 1 AC1 10 ALA A 122 PRO A 123 ASN A 124 PHE A 146 SITE 2 AC1 10 HIS A 151 ARG A 164 VAL A 165 GLU A 180 SITE 3 AC1 10 SER A 181 SER B 221 SITE 1 AC2 10 PRO C 123 ASN C 124 PHE C 146 HIS C 151 SITE 2 AC2 10 ARG C 164 VAL C 165 PRO C 166 GLU C 180 SITE 3 AC2 10 SER C 181 SER D 221 CRYST1 54.649 124.966 161.238 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018299 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006202 0.00000