HEADER TRANSFERASE 25-SEP-01 1K1F TITLE STRUCTURE OF THE BCR-ABL ONCOPROTEIN OLIGOMERIZATION DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BREAKPOINT CLUSTER REGION PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 FRAGMENT: BCR1-72; COMPND 5 EC: 2.7.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OLIGOMERIZATION, COILED COIL, BCR-ABL KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHAO,S.GHAFFARI,H.LODISH,V.N.MALASHKEVICH,P.S.KIM REVDAT 5 30-OCT-24 1K1F 1 REMARK REVDAT 4 27-OCT-21 1K1F 1 SEQADV LINK REVDAT 3 24-FEB-09 1K1F 1 VERSN REVDAT 2 01-APR-03 1K1F 1 JRNL REVDAT 1 06-FEB-02 1K1F 0 JRNL AUTH X.ZHAO,S.GHAFFARI,H.LODISH,V.N.MALASHKEVICH,P.S.KIM JRNL TITL STRUCTURE OF THE BCR-ABL ONCOPROTEIN OLIGOMERIZATION DOMAIN. JRNL REF NAT.STRUCT.BIOL. V. 9 117 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 11780146 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1412713.360 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 51251 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.262 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2505 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6512 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4358 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.21000 REMARK 3 B22 (A**2) : -9.68000 REMARK 3 B33 (A**2) : 0.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.43000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.060 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.48 REMARK 3 BSOL : 80.63 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1K1F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-01. REMARK 100 THE DEPOSITION ID IS D_1000014439. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686,0.9789,0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51251 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, PH 5.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 60.58650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 68 REMARK 465 SER A 69 REMARK 465 TYR A 70 REMARK 465 ASP A 71 REMARK 465 ARG A 72 REMARK 465 LYS B 68 REMARK 465 SER B 69 REMARK 465 TYR B 70 REMARK 465 ASP B 71 REMARK 465 ARG B 72 REMARK 465 LYS C 68 REMARK 465 SER C 69 REMARK 465 TYR C 70 REMARK 465 ASP C 71 REMARK 465 ARG C 72 REMARK 465 LYS D 67 REMARK 465 LYS D 68 REMARK 465 SER D 69 REMARK 465 TYR D 70 REMARK 465 ASP D 71 REMARK 465 ARG D 72 REMARK 465 MSE E 1 REMARK 465 VAL E 2 REMARK 465 LYS E 68 REMARK 465 SER E 69 REMARK 465 TYR E 70 REMARK 465 ASP E 71 REMARK 465 ARG E 72 REMARK 465 LYS F 68 REMARK 465 SER F 69 REMARK 465 TYR F 70 REMARK 465 ASP F 71 REMARK 465 ARG F 72 REMARK 465 GLU G 66 REMARK 465 LYS G 67 REMARK 465 LYS G 68 REMARK 465 SER G 69 REMARK 465 TYR G 70 REMARK 465 ASP G 71 REMARK 465 ARG G 72 REMARK 465 MSE H 1 REMARK 465 VAL H 2 REMARK 465 ASP H 3 REMARK 465 LYS H 67 REMARK 465 LYS H 68 REMARK 465 SER H 69 REMARK 465 TYR H 70 REMARK 465 ASP H 71 REMARK 465 ARG H 72 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO C 4 N PHE C 7 2.09 REMARK 500 O ALA F 64 N GLU F 66 2.11 REMARK 500 O PRO C 4 N GLY C 6 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LEU F 25 O PRO G 4 2754 2.12 REMARK 500 O ARG E 22 NH1 ARG H 44 1455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP C 3 C PRO C 4 N 0.120 REMARK 500 PRO C 4 N PRO C 4 CA 0.147 REMARK 500 PRO C 4 C VAL C 5 N 0.250 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO C 4 C - N - CA ANGL. DEV. = 11.6 DEGREES REMARK 500 PRO C 4 CA - C - N ANGL. DEV. = -25.6 DEGREES REMARK 500 PRO C 4 O - C - N ANGL. DEV. = 14.2 DEGREES REMARK 500 VAL C 5 C - N - CA ANGL. DEV. = -24.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 2 137.01 -175.65 REMARK 500 PHE A 15 70.52 -118.17 REMARK 500 PRO A 16 -9.03 -54.28 REMARK 500 VAL B 2 34.42 -86.60 REMARK 500 PRO B 16 31.57 -71.29 REMARK 500 ASP B 17 41.90 -146.49 REMARK 500 ARG B 26 -63.86 -144.82 REMARK 500 ALA B 64 -85.17 -31.76 REMARK 500 VAL C 2 96.65 62.21 REMARK 500 ASP C 3 -147.68 -94.35 REMARK 500 PRO C 4 -134.87 -35.62 REMARK 500 VAL C 5 -50.21 -0.33 REMARK 500 ASP C 17 1.47 -54.88 REMARK 500 LEU C 63 -75.04 -41.97 REMARK 500 ALA C 64 -17.97 -35.32 REMARK 500 PRO D 4 -73.67 -19.03 REMARK 500 ARG D 22 67.89 -105.02 REMARK 500 PRO E 4 94.03 -32.86 REMARK 500 VAL E 5 -49.80 -146.77 REMARK 500 ASP E 17 58.39 -96.32 REMARK 500 PRO E 20 138.92 -35.98 REMARK 500 VAL F 2 83.46 79.86 REMARK 500 PRO F 4 -37.85 -23.19 REMARK 500 LEU F 63 -71.43 -57.22 REMARK 500 ALA F 64 -170.34 -46.55 REMARK 500 LYS F 65 -57.18 10.70 REMARK 500 GLU F 66 -17.64 -47.66 REMARK 500 ASP G 3 129.14 4.92 REMARK 500 PRO G 4 73.95 -54.36 REMARK 500 VAL G 5 106.86 163.49 REMARK 500 GLN G 14 -31.03 -141.49 REMARK 500 PRO G 21 79.69 -65.95 REMARK 500 ARG G 22 97.30 -43.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO C 4 13.93 REMARK 500 REMARK 500 REMARK: NULL DBREF 1K1F A 1 72 UNP P11274 BCR_HUMAN 1 72 DBREF 1K1F B 1 72 UNP P11274 BCR_HUMAN 1 72 DBREF 1K1F C 1 72 UNP P11274 BCR_HUMAN 1 72 DBREF 1K1F D 1 72 UNP P11274 BCR_HUMAN 1 72 DBREF 1K1F E 1 72 UNP P11274 BCR_HUMAN 1 72 DBREF 1K1F F 1 72 UNP P11274 BCR_HUMAN 1 72 DBREF 1K1F G 1 72 UNP P11274 BCR_HUMAN 1 72 DBREF 1K1F H 1 72 UNP P11274 BCR_HUMAN 1 72 SEQADV 1K1F MSE A 1 UNP P11274 MET 1 MODIFIED RESIDUE SEQADV 1K1F MSE A 23 UNP P11274 MET 23 MODIFIED RESIDUE SEQADV 1K1F ALA A 38 UNP P11274 CYS 38 ENGINEERED MUTATION SEQADV 1K1F MSE A 56 UNP P11274 MET 56 MODIFIED RESIDUE SEQADV 1K1F MSE B 1 UNP P11274 MET 1 MODIFIED RESIDUE SEQADV 1K1F MSE B 23 UNP P11274 MET 23 MODIFIED RESIDUE SEQADV 1K1F ALA B 38 UNP P11274 CYS 38 ENGINEERED MUTATION SEQADV 1K1F MSE B 56 UNP P11274 MET 56 MODIFIED RESIDUE SEQADV 1K1F MSE C 1 UNP P11274 MET 1 MODIFIED RESIDUE SEQADV 1K1F MSE C 23 UNP P11274 MET 23 MODIFIED RESIDUE SEQADV 1K1F ALA C 38 UNP P11274 CYS 38 ENGINEERED MUTATION SEQADV 1K1F MSE C 56 UNP P11274 MET 56 MODIFIED RESIDUE SEQADV 1K1F MSE D 1 UNP P11274 MET 1 MODIFIED RESIDUE SEQADV 1K1F MSE D 23 UNP P11274 MET 23 MODIFIED RESIDUE SEQADV 1K1F ALA D 38 UNP P11274 CYS 38 ENGINEERED MUTATION SEQADV 1K1F MSE D 56 UNP P11274 MET 56 MODIFIED RESIDUE SEQADV 1K1F MSE E 1 UNP P11274 MET 1 MODIFIED RESIDUE SEQADV 1K1F MSE E 23 UNP P11274 MET 23 MODIFIED RESIDUE SEQADV 1K1F ALA E 38 UNP P11274 CYS 38 ENGINEERED MUTATION SEQADV 1K1F MSE E 56 UNP P11274 MET 56 MODIFIED RESIDUE SEQADV 1K1F MSE F 1 UNP P11274 MET 1 MODIFIED RESIDUE SEQADV 1K1F MSE F 23 UNP P11274 MET 23 MODIFIED RESIDUE SEQADV 1K1F ALA F 38 UNP P11274 CYS 38 ENGINEERED MUTATION SEQADV 1K1F MSE F 56 UNP P11274 MET 56 MODIFIED RESIDUE SEQADV 1K1F MSE G 1 UNP P11274 MET 1 MODIFIED RESIDUE SEQADV 1K1F MSE G 23 UNP P11274 MET 23 MODIFIED RESIDUE SEQADV 1K1F ALA G 38 UNP P11274 CYS 38 ENGINEERED MUTATION SEQADV 1K1F MSE G 56 UNP P11274 MET 56 MODIFIED RESIDUE SEQADV 1K1F MSE H 1 UNP P11274 MET 1 MODIFIED RESIDUE SEQADV 1K1F MSE H 23 UNP P11274 MET 23 MODIFIED RESIDUE SEQADV 1K1F ALA H 38 UNP P11274 CYS 38 ENGINEERED MUTATION SEQADV 1K1F MSE H 56 UNP P11274 MET 56 MODIFIED RESIDUE SEQRES 1 A 72 MSE VAL ASP PRO VAL GLY PHE ALA GLU ALA TRP LYS ALA SEQRES 2 A 72 GLN PHE PRO ASP SER GLU PRO PRO ARG MSE GLU LEU ARG SEQRES 3 A 72 SER VAL GLY ASP ILE GLU GLN GLU LEU GLU ARG ALA LYS SEQRES 4 A 72 ALA SER ILE ARG ARG LEU GLU GLN GLU VAL ASN GLN GLU SEQRES 5 A 72 ARG PHE ARG MSE ILE TYR LEU GLN THR LEU LEU ALA LYS SEQRES 6 A 72 GLU LYS LYS SER TYR ASP ARG SEQRES 1 B 72 MSE VAL ASP PRO VAL GLY PHE ALA GLU ALA TRP LYS ALA SEQRES 2 B 72 GLN PHE PRO ASP SER GLU PRO PRO ARG MSE GLU LEU ARG SEQRES 3 B 72 SER VAL GLY ASP ILE GLU GLN GLU LEU GLU ARG ALA LYS SEQRES 4 B 72 ALA SER ILE ARG ARG LEU GLU GLN GLU VAL ASN GLN GLU SEQRES 5 B 72 ARG PHE ARG MSE ILE TYR LEU GLN THR LEU LEU ALA LYS SEQRES 6 B 72 GLU LYS LYS SER TYR ASP ARG SEQRES 1 C 72 MSE VAL ASP PRO VAL GLY PHE ALA GLU ALA TRP LYS ALA SEQRES 2 C 72 GLN PHE PRO ASP SER GLU PRO PRO ARG MSE GLU LEU ARG SEQRES 3 C 72 SER VAL GLY ASP ILE GLU GLN GLU LEU GLU ARG ALA LYS SEQRES 4 C 72 ALA SER ILE ARG ARG LEU GLU GLN GLU VAL ASN GLN GLU SEQRES 5 C 72 ARG PHE ARG MSE ILE TYR LEU GLN THR LEU LEU ALA LYS SEQRES 6 C 72 GLU LYS LYS SER TYR ASP ARG SEQRES 1 D 72 MSE VAL ASP PRO VAL GLY PHE ALA GLU ALA TRP LYS ALA SEQRES 2 D 72 GLN PHE PRO ASP SER GLU PRO PRO ARG MSE GLU LEU ARG SEQRES 3 D 72 SER VAL GLY ASP ILE GLU GLN GLU LEU GLU ARG ALA LYS SEQRES 4 D 72 ALA SER ILE ARG ARG LEU GLU GLN GLU VAL ASN GLN GLU SEQRES 5 D 72 ARG PHE ARG MSE ILE TYR LEU GLN THR LEU LEU ALA LYS SEQRES 6 D 72 GLU LYS LYS SER TYR ASP ARG SEQRES 1 E 72 MSE VAL ASP PRO VAL GLY PHE ALA GLU ALA TRP LYS ALA SEQRES 2 E 72 GLN PHE PRO ASP SER GLU PRO PRO ARG MSE GLU LEU ARG SEQRES 3 E 72 SER VAL GLY ASP ILE GLU GLN GLU LEU GLU ARG ALA LYS SEQRES 4 E 72 ALA SER ILE ARG ARG LEU GLU GLN GLU VAL ASN GLN GLU SEQRES 5 E 72 ARG PHE ARG MSE ILE TYR LEU GLN THR LEU LEU ALA LYS SEQRES 6 E 72 GLU LYS LYS SER TYR ASP ARG SEQRES 1 F 72 MSE VAL ASP PRO VAL GLY PHE ALA GLU ALA TRP LYS ALA SEQRES 2 F 72 GLN PHE PRO ASP SER GLU PRO PRO ARG MSE GLU LEU ARG SEQRES 3 F 72 SER VAL GLY ASP ILE GLU GLN GLU LEU GLU ARG ALA LYS SEQRES 4 F 72 ALA SER ILE ARG ARG LEU GLU GLN GLU VAL ASN GLN GLU SEQRES 5 F 72 ARG PHE ARG MSE ILE TYR LEU GLN THR LEU LEU ALA LYS SEQRES 6 F 72 GLU LYS LYS SER TYR ASP ARG SEQRES 1 G 72 MSE VAL ASP PRO VAL GLY PHE ALA GLU ALA TRP LYS ALA SEQRES 2 G 72 GLN PHE PRO ASP SER GLU PRO PRO ARG MSE GLU LEU ARG SEQRES 3 G 72 SER VAL GLY ASP ILE GLU GLN GLU LEU GLU ARG ALA LYS SEQRES 4 G 72 ALA SER ILE ARG ARG LEU GLU GLN GLU VAL ASN GLN GLU SEQRES 5 G 72 ARG PHE ARG MSE ILE TYR LEU GLN THR LEU LEU ALA LYS SEQRES 6 G 72 GLU LYS LYS SER TYR ASP ARG SEQRES 1 H 72 MSE VAL ASP PRO VAL GLY PHE ALA GLU ALA TRP LYS ALA SEQRES 2 H 72 GLN PHE PRO ASP SER GLU PRO PRO ARG MSE GLU LEU ARG SEQRES 3 H 72 SER VAL GLY ASP ILE GLU GLN GLU LEU GLU ARG ALA LYS SEQRES 4 H 72 ALA SER ILE ARG ARG LEU GLU GLN GLU VAL ASN GLN GLU SEQRES 5 H 72 ARG PHE ARG MSE ILE TYR LEU GLN THR LEU LEU ALA LYS SEQRES 6 H 72 GLU LYS LYS SER TYR ASP ARG MODRES 1K1F MSE A 1 MET SELENOMETHIONINE MODRES 1K1F MSE A 23 MET SELENOMETHIONINE MODRES 1K1F MSE A 56 MET SELENOMETHIONINE MODRES 1K1F MSE B 1 MET SELENOMETHIONINE MODRES 1K1F MSE B 23 MET SELENOMETHIONINE MODRES 1K1F MSE B 56 MET SELENOMETHIONINE MODRES 1K1F MSE C 1 MET SELENOMETHIONINE MODRES 1K1F MSE C 23 MET SELENOMETHIONINE MODRES 1K1F MSE C 56 MET SELENOMETHIONINE MODRES 1K1F MSE D 1 MET SELENOMETHIONINE MODRES 1K1F MSE D 23 MET SELENOMETHIONINE MODRES 1K1F MSE D 56 MET SELENOMETHIONINE MODRES 1K1F MSE E 23 MET SELENOMETHIONINE MODRES 1K1F MSE E 56 MET SELENOMETHIONINE MODRES 1K1F MSE F 1 MET SELENOMETHIONINE MODRES 1K1F MSE F 23 MET SELENOMETHIONINE MODRES 1K1F MSE F 56 MET SELENOMETHIONINE MODRES 1K1F MSE G 1 MET SELENOMETHIONINE MODRES 1K1F MSE G 23 MET SELENOMETHIONINE MODRES 1K1F MSE G 56 MET SELENOMETHIONINE MODRES 1K1F MSE H 23 MET SELENOMETHIONINE MODRES 1K1F MSE H 56 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 23 8 HET MSE A 56 8 HET MSE B 1 8 HET MSE B 23 8 HET MSE B 56 8 HET MSE C 1 8 HET MSE C 23 8 HET MSE C 56 8 HET MSE D 1 8 HET MSE D 23 8 HET MSE D 56 8 HET MSE E 23 8 HET MSE E 56 8 HET MSE F 1 8 HET MSE F 23 8 HET MSE F 56 8 HET MSE G 1 8 HET MSE G 23 8 HET MSE G 56 8 HET MSE H 23 8 HET MSE H 56 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 22(C5 H11 N O2 SE) FORMUL 9 HOH *420(H2 O) HELIX 1 1 ASP A 3 PHE A 15 1 13 HELIX 2 2 SER A 27 LYS A 65 1 39 HELIX 3 3 VAL B 5 ALA B 13 1 9 HELIX 4 4 SER B 27 GLU B 66 1 40 HELIX 5 5 PRO C 4 PHE C 15 1 12 HELIX 6 6 SER C 27 LYS C 67 1 41 HELIX 7 7 ASP D 3 PHE D 15 1 13 HELIX 8 8 SER D 27 GLU D 66 1 40 HELIX 9 9 GLY E 6 PHE E 15 1 10 HELIX 10 10 SER E 27 LYS E 67 1 41 HELIX 11 11 ASP F 3 PHE F 15 1 13 HELIX 12 12 SER F 27 ALA F 64 1 38 HELIX 13 13 GLY G 6 ALA G 13 1 8 HELIX 14 14 SER G 27 LYS G 65 1 39 HELIX 15 15 PRO H 4 PHE H 15 1 12 HELIX 16 16 SER H 27 LYS H 65 1 39 LINK C MSE A 1 N VAL A 2 1555 1555 1.33 LINK C ARG A 22 N MSE A 23 1555 1555 1.33 LINK C MSE A 23 N GLU A 24 1555 1555 1.33 LINK C ARG A 55 N MSE A 56 1555 1555 1.33 LINK C MSE A 56 N ILE A 57 1555 1555 1.33 LINK C MSE B 1 N VAL B 2 1555 1555 1.33 LINK C ARG B 22 N MSE B 23 1555 1555 1.32 LINK C MSE B 23 N GLU B 24 1555 1555 1.33 LINK C ARG B 55 N MSE B 56 1555 1555 1.33 LINK C MSE B 56 N ILE B 57 1555 1555 1.32 LINK C MSE C 1 N VAL C 2 1555 1555 1.27 LINK CE MSE C 1 CB GLU D 66 1555 1555 1.73 LINK C ARG C 22 N MSE C 23 1555 1555 1.33 LINK C MSE C 23 N GLU C 24 1555 1555 1.32 LINK C ARG C 55 N MSE C 56 1555 1555 1.34 LINK C MSE C 56 N ILE C 57 1555 1555 1.33 LINK C MSE D 1 N VAL D 2 1555 1555 1.33 LINK C ARG D 22 N MSE D 23 1555 1555 1.33 LINK C MSE D 23 N GLU D 24 1555 1555 1.33 LINK C ARG D 55 N MSE D 56 1555 1555 1.33 LINK C MSE D 56 N ILE D 57 1555 1555 1.33 LINK C ARG E 22 N MSE E 23 1555 1555 1.33 LINK C MSE E 23 N GLU E 24 1555 1555 1.34 LINK C ARG E 55 N MSE E 56 1555 1555 1.33 LINK C MSE E 56 N ILE E 57 1555 1555 1.33 LINK C MSE F 1 N VAL F 2 1555 1555 1.33 LINK C ARG F 22 N MSE F 23 1555 1555 1.33 LINK C MSE F 23 N GLU F 24 1555 1555 1.33 LINK C ARG F 55 N MSE F 56 1555 1555 1.33 LINK C MSE F 56 N ILE F 57 1555 1555 1.33 LINK C MSE G 1 N VAL G 2 1555 1555 1.33 LINK C ARG G 22 N MSE G 23 1555 1555 1.33 LINK C MSE G 23 N GLU G 24 1555 1555 1.33 LINK C ARG G 55 N MSE G 56 1555 1555 1.33 LINK C MSE G 56 N ILE G 57 1555 1555 1.33 LINK C ARG H 22 N MSE H 23 1555 1555 1.33 LINK C MSE H 23 N GLU H 24 1555 1555 1.33 LINK C ARG H 55 N MSE H 56 1555 1555 1.33 LINK C MSE H 56 N ILE H 57 1555 1555 1.33 CRYST1 35.988 121.173 60.432 90.00 93.03 90.00 P 1 21 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027787 0.000000 0.001470 0.00000 SCALE2 0.000000 0.008253 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016571 0.00000 CONECT 1 2 CONECT 2 1 3 5 CONECT 3 2 4 9 CONECT 4 3 CONECT 5 2 6 CONECT 6 5 7 CONECT 7 6 8 CONECT 8 7 CONECT 9 3 CONECT 166 175 CONECT 175 166 176 CONECT 176 175 177 179 CONECT 177 176 178 183 CONECT 178 177 CONECT 179 176 180 CONECT 180 179 181 CONECT 181 180 182 CONECT 182 181 CONECT 183 177 CONECT 446 455 CONECT 455 446 456 CONECT 456 455 457 459 CONECT 457 456 458 463 CONECT 458 457 CONECT 459 456 460 CONECT 460 459 461 CONECT 461 460 462 CONECT 462 461 CONECT 463 457 CONECT 556 557 CONECT 557 556 558 560 CONECT 558 557 559 564 CONECT 559 558 CONECT 560 557 561 CONECT 561 560 562 CONECT 562 561 563 CONECT 563 562 CONECT 564 558 CONECT 721 730 CONECT 730 721 731 CONECT 731 730 732 734 CONECT 732 731 733 738 CONECT 733 732 CONECT 734 731 735 CONECT 735 734 736 CONECT 736 735 737 CONECT 737 736 CONECT 738 732 CONECT 1001 1010 CONECT 1010 1001 1011 CONECT 1011 1010 1012 1014 CONECT 1012 1011 1013 1018 CONECT 1013 1012 CONECT 1014 1011 1015 CONECT 1015 1014 1016 CONECT 1016 1015 1017 CONECT 1017 1016 CONECT 1018 1012 CONECT 1111 1112 CONECT 1112 1111 1113 1115 CONECT 1113 1112 1114 1119 CONECT 1114 1113 CONECT 1115 1112 1116 CONECT 1116 1115 1117 CONECT 1117 1116 1118 CONECT 1118 1117 2206 CONECT 1119 1113 CONECT 1276 1285 CONECT 1285 1276 1286 CONECT 1286 1285 1287 1289 CONECT 1287 1286 1288 1293 CONECT 1288 1287 CONECT 1289 1286 1290 CONECT 1290 1289 1291 CONECT 1291 1290 1292 CONECT 1292 1291 CONECT 1293 1287 CONECT 1556 1565 CONECT 1565 1556 1566 CONECT 1566 1565 1567 1569 CONECT 1567 1566 1568 1573 CONECT 1568 1567 CONECT 1569 1566 1570 CONECT 1570 1569 1571 CONECT 1571 1570 1572 CONECT 1572 1571 CONECT 1573 1567 CONECT 1666 1667 CONECT 1667 1666 1668 1670 CONECT 1668 1667 1669 1674 CONECT 1669 1668 CONECT 1670 1667 1671 CONECT 1671 1670 1672 CONECT 1672 1671 1673 CONECT 1673 1672 CONECT 1674 1668 CONECT 1831 1840 CONECT 1840 1831 1841 CONECT 1841 1840 1842 1844 CONECT 1842 1841 1843 1848 CONECT 1843 1842 CONECT 1844 1841 1845 CONECT 1845 1844 1846 CONECT 1846 1845 1847 CONECT 1847 1846 CONECT 1848 1842 CONECT 2111 2120 CONECT 2120 2111 2121 CONECT 2121 2120 2122 2124 CONECT 2122 2121 2123 2128 CONECT 2123 2122 CONECT 2124 2121 2125 CONECT 2125 2124 2126 CONECT 2126 2125 2127 CONECT 2127 2126 CONECT 2128 2122 CONECT 2206 1118 CONECT 2362 2371 CONECT 2371 2362 2372 CONECT 2372 2371 2373 2375 CONECT 2373 2372 2374 2379 CONECT 2374 2373 CONECT 2375 2372 2376 CONECT 2376 2375 2377 CONECT 2377 2376 2378 CONECT 2378 2377 CONECT 2379 2373 CONECT 2642 2651 CONECT 2651 2642 2652 CONECT 2652 2651 2653 2655 CONECT 2653 2652 2654 2659 CONECT 2654 2653 CONECT 2655 2652 2656 CONECT 2656 2655 2657 CONECT 2657 2656 2658 CONECT 2658 2657 CONECT 2659 2653 CONECT 2752 2753 CONECT 2753 2752 2754 2756 CONECT 2754 2753 2755 2760 CONECT 2755 2754 CONECT 2756 2753 2757 CONECT 2757 2756 2758 CONECT 2758 2757 2759 CONECT 2759 2758 CONECT 2760 2754 CONECT 2917 2926 CONECT 2926 2917 2927 CONECT 2927 2926 2928 2930 CONECT 2928 2927 2929 2934 CONECT 2929 2928 CONECT 2930 2927 2931 CONECT 2931 2930 2932 CONECT 2932 2931 2933 CONECT 2933 2932 CONECT 2934 2928 CONECT 3197 3206 CONECT 3206 3197 3207 CONECT 3207 3206 3208 3210 CONECT 3208 3207 3209 3214 CONECT 3209 3208 CONECT 3210 3207 3211 CONECT 3211 3210 3212 CONECT 3212 3211 3213 CONECT 3213 3212 CONECT 3214 3208 CONECT 3307 3308 CONECT 3308 3307 3309 3311 CONECT 3309 3308 3310 3315 CONECT 3310 3309 CONECT 3311 3308 3312 CONECT 3312 3311 3313 CONECT 3313 3312 3314 CONECT 3314 3313 CONECT 3315 3309 CONECT 3472 3481 CONECT 3481 3472 3482 CONECT 3482 3481 3483 3485 CONECT 3483 3482 3484 3489 CONECT 3484 3483 CONECT 3485 3482 3486 CONECT 3486 3485 3487 CONECT 3487 3486 3488 CONECT 3488 3487 CONECT 3489 3483 CONECT 3752 3761 CONECT 3761 3752 3762 CONECT 3762 3761 3763 3765 CONECT 3763 3762 3764 3769 CONECT 3764 3763 CONECT 3765 3762 3766 CONECT 3766 3765 3767 CONECT 3767 3766 3768 CONECT 3768 3767 CONECT 3769 3763 CONECT 3986 3995 CONECT 3995 3986 3996 CONECT 3996 3995 3997 3999 CONECT 3997 3996 3998 4003 CONECT 3998 3997 CONECT 3999 3996 4000 CONECT 4000 3999 4001 CONECT 4001 4000 4002 CONECT 4002 4001 CONECT 4003 3997 CONECT 4266 4275 CONECT 4275 4266 4276 CONECT 4276 4275 4277 4279 CONECT 4277 4276 4278 4283 CONECT 4278 4277 CONECT 4279 4276 4280 CONECT 4280 4279 4281 CONECT 4281 4280 4282 CONECT 4282 4281 CONECT 4283 4277 MASTER 412 0 22 16 0 0 0 6 4778 8 215 48 END