HEADER MEMBRANE PROTEIN 26-SEP-01 1K24 TITLE CRYSTAL STRUCTURE OF THE OPCA OUTER MEMBRANE ADHESIN/INVASIN FROM TITLE 2 NEISSERIA MENINGITIDIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OPCA PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 3 ORGANISM_TAXID: 487; SOURCE 4 OTHER_DETAILS: OUTER MEMBRANE KEYWDS ADHESIN, INVASIN, MEMBRANE PROTEIN, OUTER MEMBRANE, BETA BARREL EXPDTA X-RAY DIFFRACTION AUTHOR S.M.PRINCE,M.ACHTMAN,J.P.DERRICK REVDAT 4 07-FEB-24 1K24 1 REMARK LINK REVDAT 3 13-JUL-11 1K24 1 VERSN REVDAT 2 24-FEB-09 1K24 1 VERSN REVDAT 1 27-MAR-02 1K24 0 JRNL AUTH S.M.PRINCE,M.ACHTMAN,J.P.DERRICK JRNL TITL CRYSTAL STRUCTURE OF THE OPCA INTEGRAL MEMBRANE ADHESIN FROM JRNL TITL 2 NEISSERIA MENINGITIDIS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 99 3417 2002 JRNL REFN ISSN 0027-8424 JRNL PMID 11891340 JRNL DOI 10.1073/PNAS.062630899 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.M.PRINCE,C.FERON,D.JANSSENS,Y.LOBET,M.ACHTMAN,B.KUSECEK, REMARK 1 AUTH 2 P.A.BULLOUGH,J.P.DERRICK REMARK 1 TITL EXPRESSION, REFOLDING AND CRYSTALLIZATION OF THE OPCA REMARK 1 TITL 2 INVASIN FROM NEISSERIA MENINGITIDIS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 57 1164 2001 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444901009416 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.ACHTMAN,M.NEILBERT,B.A.CROWE,W.STRITTMATTER,B.KUSECEK, REMARK 1 AUTH 2 E.WEYSE,M.J.WALSH,B.SLAWIG,G.MORELLI,A.MOLL,M.BLAKE REMARK 1 TITL PURIFICATION AND CHARACTERIZATION OF EIGHT CLASS 5 OUTER REMARK 1 TITL 2 MEMBRANE PROTEIN VARIANTS FROM A CLONE OF NEISSERIA REMARK 1 TITL 3 MENINGITIDIS SEROGROUP A REMARK 1 REF J.EXP.MED. V. 168 507 1988 REMARK 1 REFN ISSN 0022-1007 REMARK 1 DOI 10.1084/JEM.168.2.507 REMARK 1 REFERENCE 3 REMARK 1 AUTH R.COLLINS,M.ACHTMAN,R.FORD,P.BULLOUGH,J.DERRICK REMARK 1 TITL PROJECTION STRUCTURE OF RECONSTITUTED OPC OUTER MEMBRANE REMARK 1 TITL 2 PROTEIN FROM NEISSERIA MENINGITIDIS REMARK 1 REF MOL.MICROBIOL. V. 32 217 1999 REMARK 1 REFN ISSN 0950-382X REMARK 1 DOI 10.1046/J.1365-2958.1999.01335.X REMARK 1 REFERENCE 4 REMARK 1 AUTH P.MERKER,J.TOMMASSEN,B.KUSACEK,M.VIRJI,D.SESARDIC,M.ACHTMAN REMARK 1 TITL TWO-DIMENSIONAL STRUCTURE OF THE OPC INVASIN FROM NEISSERIA REMARK 1 TITL 2 MENINGITIDIS REMARK 1 REF MOL.MICROBIOL. V. 23 281 1997 REMARK 1 REFN ISSN 0950-382X REMARK 1 DOI 10.1046/J.1365-2958.1997.2051567.X REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 20754 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1093 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1952 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 144 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.25000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : -1.58000 REMARK 3 B13 (A**2) : -1.67000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.203 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.182 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.423 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.019 ; 0.021 REMARK 3 ANGLE DISTANCE (A) : 1.951 ; 1.954 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : 0.155 ; 0.500 REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.005 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.143 ; 0.200 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 5.305 ; 3.000 REMARK 3 MULTIPLE TORSION (A) : 19.876; 15.000 REMARK 3 H-BOND (X...Y) (A) : 0.228 ; 0.500 REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.567 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 0.913 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.622 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.489 ; 4.500 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 MAXIMUM LIKELIHOOD TARGET, BULK SOLVENT CORRECTION APPLIED. REMARK 3 TLS TENSORS WERE USED TO MODEL DISORDER, THE DEPOSITION REMARK 3 CONTAINS THE EQUIVALENT B-FACTORS CALCULATED FROM THESE REMARK 3 TENSORS. REMARK 4 REMARK 4 1K24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-01. REMARK 100 THE DEPOSITION ID IS D_1000014464. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND & GE-CRYSTAL REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21875 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 36.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.32500 REMARK 200 R SYM FOR SHELL (I) : 0.32500 REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6K, ZINC ACETATE, ZINC CHLORIDE, REMARK 280 C10E5, BETA-HEPTYL-GLUCOSIDE, TRIS/HCL, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 48.42950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.17300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.42950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.17300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -269.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 96.85900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLN A 2 REMARK 465 GLU A 3 REMARK 465 LEU A 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 140 O HOH A 493 1.75 REMARK 500 O HOH A 409 O HOH A 503 1.87 REMARK 500 O HOH A 482 O HOH A 494 1.98 REMARK 500 NH2 ARG A 168 O HOH A 545 1.98 REMARK 500 NH2 ARG A 248 O HOH A 494 2.06 REMARK 500 OE1 GLN A 148 O HOH A 492 2.07 REMARK 500 O HOH A 446 O HOH A 515 2.09 REMARK 500 O HOH A 415 O HOH A 472 2.09 REMARK 500 OE2 GLU A 117 NZ LYS A 162 2.10 REMARK 500 OE2 GLU A 244 O HOH A 536 2.11 REMARK 500 O ASP A 69 N ASN A 71 2.13 REMARK 500 O HOH A 455 O HOH A 477 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 488 O HOH A 488 2655 1.93 REMARK 500 OD1 ASN A 177 OE2 GLU A 223 3546 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 80 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 LEU A 81 N - CA - C ANGL. DEV. = -28.2 DEGREES REMARK 500 ASP A 104 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 144 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 6 98.63 157.11 REMARK 500 SER A 21 -141.25 -115.53 REMARK 500 LEU A 26 23.99 18.64 REMARK 500 GLU A 70 -23.91 55.33 REMARK 500 ASN A 71 66.12 91.85 REMARK 500 LYS A 72 107.40 172.05 REMARK 500 LYS A 77 -67.59 175.87 REMARK 500 ASN A 78 114.32 -179.76 REMARK 500 VAL A 79 79.01 -179.93 REMARK 500 LYS A 80 -103.00 -171.06 REMARK 500 ASN A 166 107.35 -163.88 REMARK 500 THR A 176 73.71 -109.09 REMARK 500 ASN A 177 68.66 4.54 REMARK 500 GLU A 203 106.26 51.66 REMARK 500 SER A 204 -24.46 83.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 13 NE2 REMARK 620 2 ASP A 15 OD2 105.9 REMARK 620 3 HIS A 35 ND1 113.4 107.3 REMARK 620 4 HOH A 408 O 99.7 128.9 101.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 28 OE1 REMARK 620 2 GLU A 28 OE1 111.4 REMARK 620 3 HIS A 30 ND1 114.6 91.1 REMARK 620 4 HIS A 30 ND1 122.3 97.1 113.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 69 OD2 REMARK 620 2 HIS A 128 NE2 114.3 REMARK 620 3 THR A 176 OG1 113.6 55.6 REMARK 620 4 GLU A 223 OE2 135.1 81.2 109.8 REMARK 620 5 GLU A 223 OE1 82.1 121.4 164.2 55.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 302 DBREF 1K24 A 1 253 UNP Q9AE79 Q9AE79_NEIME 20 272 SEQRES 1 A 253 ALA GLN GLU LEU GLN THR ALA ASN GLU PHE THR VAL HIS SEQRES 2 A 253 THR ASP LEU SER SER ILE SER SER THR ARG ALA PHE LEU SEQRES 3 A 253 LYS GLU LYS HIS LYS ALA ALA LYS HIS ILE GLY VAL ARG SEQRES 4 A 253 ALA ASP ILE PRO PHE ASP ALA ASN GLN GLY ILE ARG LEU SEQRES 5 A 253 GLU ALA GLY PHE GLY ARG SER LYS LYS ASN ILE ILE ASN SEQRES 6 A 253 LEU GLU THR ASP GLU ASN LYS LEU GLY LYS THR LYS ASN SEQRES 7 A 253 VAL LYS LEU PRO THR GLY VAL PRO GLU ASN ARG ILE ASP SEQRES 8 A 253 LEU TYR THR GLY TYR THR TYR THR GLN THR LEU SER ASP SEQRES 9 A 253 SER LEU ASN PHE ARG VAL GLY ALA GLY LEU GLY PHE GLU SEQRES 10 A 253 SER SER LYS ASP SER ILE LYS THR THR LYS HIS THR LEU SEQRES 11 A 253 HIS SER SER ARG GLN SER TRP LEU ALA LYS VAL HIS ALA SEQRES 12 A 253 ASP LEU LEU SER GLN LEU GLY ASN GLY TRP TYR ILE ASN SEQRES 13 A 253 PRO TRP SER GLU VAL LYS PHE ASP LEU ASN SER ARG TYR SEQRES 14 A 253 LYS LEU ASN THR GLY VAL THR ASN LEU LYS LYS ASP ILE SEQRES 15 A 253 ASN GLN LYS THR ASN GLY TRP GLY PHE GLY LEU GLY ALA SEQRES 16 A 253 ASN ILE GLY LYS LYS LEU GLY GLU SER ALA SER ILE GLU SEQRES 17 A 253 ALA GLY PRO PHE TYR LYS GLN ARG THR TYR LYS GLU SER SEQRES 18 A 253 GLY GLU PHE SER VAL THR THR LYS SER GLY ASP VAL SER SEQRES 19 A 253 LEU THR ILE PRO LYS THR SER ILE ARG GLU TYR GLY LEU SEQRES 20 A 253 ARG VAL GLY ILE LYS PHE HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET 1PE A 301 16 HET 1PE A 302 16 HETNAM ZN ZINC ION HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 2 ZN 3(ZN 2+) FORMUL 5 1PE 2(C10 H22 O6) FORMUL 7 HOH *144(H2 O) HELIX 1 1 THR A 173 THR A 176 5 4 SHEET 1 A11 ILE A 182 LYS A 185 0 SHEET 2 A11 TRP A 153 LEU A 171 -1 N TYR A 169 O GLN A 184 SHEET 3 A11 GLY A 188 LEU A 201 -1 O GLY A 188 N ASP A 164 SHEET 4 A11 ALA A 205 TYR A 218 -1 O ALA A 205 N LEU A 201 SHEET 5 A11 THR A 240 PHE A 253 -1 O THR A 240 N TYR A 218 SHEET 6 A11 GLU A 9 SER A 20 -1 O PHE A 10 N PHE A 253 SHEET 7 A11 HIS A 30 PRO A 43 -1 N LYS A 31 O ILE A 19 SHEET 8 A11 GLN A 48 SER A 59 -1 O ILE A 50 N ILE A 42 SHEET 9 A11 ASN A 88 SER A 103 -1 O ARG A 89 N GLY A 57 SHEET 10 A11 LEU A 106 LYS A 124 -1 O LEU A 106 N LEU A 102 SHEET 11 A11 THR A 129 GLY A 150 -1 O LEU A 130 N ILE A 123 SHEET 1 B 2 PHE A 224 THR A 228 0 SHEET 2 B 2 GLY A 231 LEU A 235 -1 O GLY A 231 N THR A 228 LINK NE2 HIS A 13 ZN ZN A 401 1555 1555 1.99 LINK OD2 ASP A 15 ZN ZN A 401 1555 1555 1.96 LINK OE1 GLU A 28 ZN ZN A 402 1555 1555 1.73 LINK OE1 GLU A 28 ZN ZN A 402 2655 1555 2.39 LINK ND1 HIS A 30 ZN ZN A 402 1555 1555 2.17 LINK ND1 HIS A 30 ZN ZN A 402 2655 1555 1.99 LINK ND1 HIS A 35 ZN ZN A 401 1555 1555 2.02 LINK OD2 ASP A 69 ZN ZN A 403 1555 1555 2.19 LINK NE2 HIS A 128 ZN ZN A 403 1555 1555 2.23 LINK OG1 THR A 176 ZN ZN A 403 1555 1555 2.60 LINK OE2 GLU A 223 ZN ZN A 403 3546 1555 2.26 LINK OE1 GLU A 223 ZN ZN A 403 3546 1555 2.45 LINK ZN ZN A 401 O HOH A 408 1555 1555 2.24 CISPEP 1 LYS A 80 LEU A 81 0 -17.77 SITE 1 AC1 4 HIS A 13 ASP A 15 HIS A 35 HOH A 408 SITE 1 AC2 2 GLU A 28 HIS A 30 SITE 1 AC3 4 ASP A 69 HIS A 128 THR A 176 GLU A 223 SITE 1 AC4 6 LEU A 149 GLY A 150 ASN A 151 TRP A 153 SITE 2 AC4 6 ILE A 197 HOH A 535 SITE 1 AC5 5 ILE A 42 PRO A 43 PHE A 44 VAL A 161 SITE 2 AC5 5 LEU A 193 CRYST1 96.859 46.346 73.977 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010324 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021577 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013518 0.00000