HEADER ISOMERASE 01-OCT-01 1K35 TITLE CRYSTAL STRUCTURE OF PHOSPHOMANNOMUTASE/PHOSPHOGLUCOMUTASE TITLE 2 FROM P.AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOMANNOMUTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PMM; COMPND 5 EC: 5.4.2.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: ALGC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3-A KEYWDS ALPHA/BETA PROTEIN, PHOSPHOSERINE, ENZYME-METAL COMPLEX, KEYWDS 2 ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.REGNI,P.A.TIPTON,L.J.BEAMER REVDAT 2 24-FEB-09 1K35 1 VERSN REVDAT 1 13-FEB-02 1K35 0 JRNL AUTH C.REGNI,P.A.TIPTON,L.J.BEAMER JRNL TITL CRYSTAL STRUCTURE OF PMM/PGM: AN ENZYME IN THE JRNL TITL 2 BIOSYNTHETIC PATHWAY OF P. AERUGINOSA VIRULENCE JRNL TITL 3 FACTORS. JRNL REF STRUCTURE V. 10 269 2002 JRNL REFN ISSN 0969-2126 JRNL PMID 11839312 JRNL DOI 10.1016/S0969-2126(02)00705-0 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 3 NUMBER OF REFLECTIONS : 21818 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1177 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3380 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 166 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.38000 REMARK 3 B22 (A**2) : -0.23000 REMARK 3 B33 (A**2) : 0.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.370 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.262 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.284 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.490 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.016 ; 0.021 REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : 0.227 ; 0.500 REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.006 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.109 ; 0.200 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 3.898 ; 3.000 REMARK 3 MULTIPLE TORSION (A) : 19.692; 15.026 REMARK 3 H-BOND (X...Y) (A) : 0.217 ; 0.500 REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.789 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.415 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.983 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.165 ; 4.500 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1K35 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-OCT-01. REMARK 100 THE RCSB ID CODE IS RCSB014501. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979151 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24319 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.01100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.33100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NA, K TARTRATE, MOPS, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.51900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.17700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.63150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.17700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.51900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.63150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 LYS A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 THR A 8 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 9 CG CD1 CD2 REMARK 470 PRO A 10 CG CD REMARK 470 ARG A 20 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 23 CG1 CG2 REMARK 470 THR A 31 OG1 CG2 REMARK 470 ARG A 55 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 66 CG CD CE NZ REMARK 470 GLU A 98 CG CD OE1 OE2 REMARK 470 GLU A 129 CG CD OE1 OE2 REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 ILE A 138 CG1 CG2 CD1 REMARK 470 LYS A 140 CG CD CE NZ REMARK 470 ASN A 141 CG OD1 ND2 REMARK 470 SER A 145 OG REMARK 470 VAL A 147 CG1 CG2 REMARK 470 ARG A 164 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 205 CG CD OE1 OE2 REMARK 470 LYS A 219 CG CD CE NZ REMARK 470 GLU A 221 CG CD OE1 OE2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 LYS A 229 CG CD CE NZ REMARK 470 LYS A 316 CG CD CE NZ REMARK 470 GLN A 357 CG CD OE1 NE2 REMARK 470 GLN A 397 CG CD OE1 NE2 REMARK 470 GLU A 400 CG CD OE1 OE2 REMARK 470 ASN A 402 CG OD1 ND2 REMARK 470 LYS A 415 CG CD CE NZ REMARK 470 GLU A 439 CG CD OE1 OE2 REMARK 470 LYS A 445 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 48 O HOH A 562 1.93 REMARK 500 NH1 ARG A 449 OXT PHE A 463 1.94 REMARK 500 NZ LYS A 285 OE1 GLU A 375 2.10 REMARK 500 O ASP A 154 O HOH A 597 2.11 REMARK 500 O HOH A 524 O HOH A 641 2.14 REMARK 500 OE2 GLU A 124 NZ LYS A 313 2.16 REMARK 500 O ASN A 402 O HOH A 536 2.16 REMARK 500 OH TYR A 92 NE2 GLN A 162 2.16 REMARK 500 O VAL A 186 O HOH A 635 2.18 REMARK 500 OE1 GLU A 325 O HOH A 548 2.18 REMARK 500 O ASN A 128 O HOH A 618 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 554 O HOH A 622 3655 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 10 N - CA - C ANGL. DEV. = 28.6 DEGREES REMARK 500 ALA A 11 N - CA - CB ANGL. DEV. = -10.7 DEGREES REMARK 500 ALA A 11 N - CA - C ANGL. DEV. = 28.0 DEGREES REMARK 500 PRO A 10 CA - C - N ANGL. DEV. = -27.1 DEGREES REMARK 500 PRO A 10 O - C - N ANGL. DEV. = 11.9 DEGREES REMARK 500 ALA A 11 C - N - CA ANGL. DEV. = 26.3 DEGREES REMARK 500 ASP A 142 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 242 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 270 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 283 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 370 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 412 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 10 143.90 -28.20 REMARK 500 ALA A 11 -17.79 -36.46 REMARK 500 ASP A 18 -167.51 -173.35 REMARK 500 ASP A 25 -121.71 179.82 REMARK 500 VAL A 65 -55.67 -23.21 REMARK 500 ASP A 74 23.34 -72.34 REMARK 500 LEU A 97 -169.29 -63.31 REMARK 500 ASN A 128 -117.25 47.41 REMARK 500 GLU A 136 6.36 -62.59 REMARK 500 ASP A 142 46.84 -105.85 REMARK 500 ILE A 187 -11.12 -155.48 REMARK 500 PHE A 210 71.73 54.14 REMARK 500 ASN A 212 -146.53 -109.44 REMARK 500 HIS A 308 -45.75 -28.28 REMARK 500 TRP A 336 -158.33 -144.82 REMARK 500 ASP A 341 110.57 -167.79 REMARK 500 VAL A 380 -128.57 -115.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 500 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SEP A 108 O3P REMARK 620 2 ASP A 246 OD1 99.5 REMARK 620 3 ASP A 242 OD2 114.7 103.2 REMARK 620 4 ASP A 244 OD2 147.1 104.2 81.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1K2Y RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PHOSPHOMANNOMUTASE/PHOSPHOGLUCOMUTASE REMARK 900 S108A MUTANT FROM P. AERUGINOSA DBREF 1K35 A 1 463 UNP P26276 ALGC_PSEAE 0 462 SEQADV 1K35 MSE A 84 UNP P26276 MET 83 MODIFIED RESIDUE SEQADV 1K35 MSE A 104 UNP P26276 MET 103 MODIFIED RESIDUE SEQADV 1K35 SEP A 108 UNP P26276 SER 107 MODIFIED RESIDUE SEQADV 1K35 MSE A 169 UNP P26276 MET 168 MODIFIED RESIDUE SEQADV 1K35 MSE A 173 UNP P26276 MET 172 MODIFIED RESIDUE SEQADV 1K35 MSE A 265 UNP P26276 MET 264 MODIFIED RESIDUE SEQADV 1K35 MSE A 303 UNP P26276 MET 302 MODIFIED RESIDUE SEQADV 1K35 MSE A 315 UNP P26276 MET 314 MODIFIED RESIDUE SEQADV 1K35 MSE A 326 UNP P26276 MET 325 MODIFIED RESIDUE SEQRES 1 A 463 MET SER THR ALA LYS ALA PRO THR LEU PRO ALA SER ILE SEQRES 2 A 463 PHE ARG ALA TYR ASP ILE ARG GLY VAL VAL GLY ASP THR SEQRES 3 A 463 LEU THR ALA GLU THR ALA TYR TRP ILE GLY ARG ALA ILE SEQRES 4 A 463 GLY SER GLU SER LEU ALA ARG GLY GLU PRO CYS VAL ALA SEQRES 5 A 463 VAL GLY ARG ASP GLY ARG LEU SER GLY PRO GLU LEU VAL SEQRES 6 A 463 LYS GLN LEU ILE GLN GLY LEU VAL ASP CYS GLY CYS GLN SEQRES 7 A 463 VAL SER ASP VAL GLY MSE VAL PRO THR PRO VAL LEU TYR SEQRES 8 A 463 TYR ALA ALA ASN VAL LEU GLU GLY LYS SER GLY VAL MSE SEQRES 9 A 463 LEU THR GLY SEP HIS ASN PRO PRO ASP TYR ASN GLY PHE SEQRES 10 A 463 LYS ILE VAL VAL ALA GLY GLU THR LEU ALA ASN GLU GLN SEQRES 11 A 463 ILE GLN ALA LEU ARG GLU ARG ILE GLU LYS ASN ASP LEU SEQRES 12 A 463 ALA SER GLY VAL GLY SER VAL GLU GLN VAL ASP ILE LEU SEQRES 13 A 463 PRO ARG TYR PHE LYS GLN ILE ARG ASP ASP ILE ALA MSE SEQRES 14 A 463 ALA LYS PRO MSE LYS VAL VAL VAL ASP CYS GLY ASN GLY SEQRES 15 A 463 VAL ALA GLY VAL ILE ALA PRO GLN LEU ILE GLU ALA LEU SEQRES 16 A 463 GLY CYS SER VAL ILE PRO LEU TYR CYS GLU VAL ASP GLY SEQRES 17 A 463 ASN PHE PRO ASN HIS HIS PRO ASP PRO GLY LYS PRO GLU SEQRES 18 A 463 ASN LEU LYS ASP LEU ILE ALA LYS VAL LYS ALA GLU ASN SEQRES 19 A 463 ALA ASP LEU GLY LEU ALA PHE ASP GLY ASP GLY ASP ARG SEQRES 20 A 463 VAL GLY VAL VAL THR ASN THR GLY THR ILE ILE TYR PRO SEQRES 21 A 463 ASP ARG LEU LEU MSE LEU PHE ALA LYS ASP VAL VAL SER SEQRES 22 A 463 ARG ASN PRO GLY ALA ASP ILE ILE PHE ASP VAL LYS CYS SEQRES 23 A 463 THR ARG ARG LEU ILE ALA LEU ILE SER GLY TYR GLY GLY SEQRES 24 A 463 ARG PRO VAL MSE TRP LYS THR GLY HIS SER LEU ILE LYS SEQRES 25 A 463 LYS LYS MSE LYS GLU THR GLY ALA LEU LEU ALA GLY GLU SEQRES 26 A 463 MSE SER GLY HIS VAL PHE PHE LYS GLU ARG TRP PHE GLY SEQRES 27 A 463 PHE ASP ASP GLY ILE TYR SER ALA ALA ARG LEU LEU GLU SEQRES 28 A 463 ILE LEU SER GLN ASP GLN ARG ASP SER GLU HIS VAL PHE SEQRES 29 A 463 SER ALA PHE PRO SER ASP ILE SER THR PRO GLU ILE ASN SEQRES 30 A 463 ILE THR VAL THR GLU ASP SER LYS PHE ALA ILE ILE GLU SEQRES 31 A 463 ALA LEU GLN ARG ASP ALA GLN TRP GLY GLU GLY ASN ILE SEQRES 32 A 463 THR THR LEU ASP GLY VAL ARG VAL ASP TYR PRO LYS GLY SEQRES 33 A 463 TRP GLY LEU VAL ARG ALA SER ASN THR THR PRO VAL LEU SEQRES 34 A 463 VAL LEU ARG PHE GLU ALA ASP THR GLU GLU GLU LEU GLU SEQRES 35 A 463 ARG ILE LYS THR VAL PHE ARG ASN GLN LEU LYS ALA VAL SEQRES 36 A 463 ASP SER SER LEU PRO VAL PRO PHE MODRES 1K35 MSE A 84 MET SELENOMETHIONINE MODRES 1K35 MSE A 104 MET SELENOMETHIONINE MODRES 1K35 SEP A 108 SER PHOSPHOSERINE MODRES 1K35 MSE A 169 MET SELENOMETHIONINE MODRES 1K35 MSE A 173 MET SELENOMETHIONINE MODRES 1K35 MSE A 265 MET SELENOMETHIONINE MODRES 1K35 MSE A 303 MET SELENOMETHIONINE MODRES 1K35 MSE A 315 MET SELENOMETHIONINE MODRES 1K35 MSE A 326 MET SELENOMETHIONINE HET MSE A 84 8 HET MSE A 104 8 HET SEP A 108 10 HET MSE A 169 8 HET MSE A 173 8 HET MSE A 265 8 HET MSE A 303 8 HET MSE A 315 8 HET MSE A 326 8 HET ZN A 500 1 HETNAM MSE SELENOMETHIONINE HETNAM SEP PHOSPHOSERINE HETNAM ZN ZINC ION HETSYN SEP PHOSPHONOSERINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *166(H2 O) HELIX 1 1 THR A 28 ARG A 46 1 19 HELIX 2 2 SER A 60 ASP A 74 1 15 HELIX 3 3 PRO A 86 LEU A 97 1 12 HELIX 4 4 ASN A 128 GLU A 139 1 12 HELIX 5 5 ILE A 155 ILE A 167 1 13 HELIX 6 6 GLY A 182 VAL A 186 5 5 HELIX 7 7 ILE A 187 GLY A 196 1 10 HELIX 8 8 LYS A 219 ASN A 222 5 4 HELIX 9 9 LEU A 223 ASN A 234 1 12 HELIX 10 10 TYR A 259 ARG A 274 1 16 HELIX 11 11 ARG A 288 TYR A 297 1 10 HELIX 12 12 GLY A 307 GLY A 319 1 13 HELIX 13 13 ASP A 341 GLN A 355 1 15 HELIX 14 14 ASP A 359 ALA A 366 1 8 HELIX 15 15 SER A 384 ALA A 396 1 13 HELIX 16 16 THR A 437 ASP A 456 1 20 SHEET 1 A 6 SER A 149 GLN A 152 0 SHEET 2 A 6 GLN A 78 MSE A 84 1 N ASP A 81 O GLU A 151 SHEET 3 A 6 CYS A 50 ARG A 55 1 N VAL A 53 O VAL A 82 SHEET 4 A 6 SER A 101 LEU A 105 1 O LEU A 105 N GLY A 54 SHEET 5 A 6 TYR A 114 VAL A 121 -1 O VAL A 120 N GLY A 102 SHEET 6 A 6 ILE A 19 VAL A 22 -1 N ILE A 19 O PHE A 117 SHEET 1 B 6 SER A 149 GLN A 152 0 SHEET 2 B 6 GLN A 78 MSE A 84 1 N ASP A 81 O GLU A 151 SHEET 3 B 6 CYS A 50 ARG A 55 1 N VAL A 53 O VAL A 82 SHEET 4 B 6 SER A 101 LEU A 105 1 O LEU A 105 N GLY A 54 SHEET 5 B 6 TYR A 114 VAL A 121 -1 O VAL A 120 N GLY A 102 SHEET 6 B 6 GLU A 124 THR A 125 -1 O GLU A 124 N VAL A 121 SHEET 1 C 5 CYS A 197 LEU A 202 0 SHEET 2 C 5 MSE A 173 ASP A 178 1 N VAL A 175 O SER A 198 SHEET 3 C 5 LEU A 237 PHE A 241 1 O LEU A 239 N ASP A 178 SHEET 4 C 5 VAL A 248 THR A 252 -1 O GLY A 249 N ALA A 240 SHEET 5 C 5 ILE A 257 ILE A 258 -1 O ILE A 258 N VAL A 250 SHEET 1 D 4 ARG A 300 TRP A 304 0 SHEET 2 D 4 ASP A 279 ASP A 283 1 N ILE A 280 O VAL A 302 SHEET 3 D 4 LEU A 322 GLY A 324 1 O LEU A 322 N ILE A 281 SHEET 4 D 4 VAL A 330 PHE A 332 -1 O PHE A 331 N ALA A 323 SHEET 1 E 5 ASN A 402 THR A 404 0 SHEET 2 E 5 VAL A 409 TYR A 413 -1 O ARG A 410 N THR A 404 SHEET 3 E 5 GLY A 416 ALA A 422 -1 O VAL A 420 N VAL A 409 SHEET 4 E 5 VAL A 428 ALA A 435 -1 O ARG A 432 N LEU A 419 SHEET 5 E 5 ILE A 371 SER A 372 -1 N ILE A 371 O ALA A 435 SHEET 1 F 5 ASN A 402 THR A 404 0 SHEET 2 F 5 VAL A 409 TYR A 413 -1 O ARG A 410 N THR A 404 SHEET 3 F 5 GLY A 416 ALA A 422 -1 O VAL A 420 N VAL A 409 SHEET 4 F 5 VAL A 428 ALA A 435 -1 O ARG A 432 N LEU A 419 SHEET 5 F 5 ILE A 376 THR A 379 -1 N ILE A 376 O LEU A 431 LINK C GLY A 83 N MSE A 84 1555 1555 1.33 LINK C MSE A 84 N VAL A 85 1555 1555 1.34 LINK C VAL A 103 N MSE A 104 1555 1555 1.33 LINK C MSE A 104 N LEU A 105 1555 1555 1.32 LINK C GLY A 107 N SEP A 108 1555 1555 1.33 LINK O3P SEP A 108 ZN ZN A 500 1555 1555 2.03 LINK C SEP A 108 N HIS A 109 1555 1555 1.32 LINK C ALA A 168 N MSE A 169 1555 1555 1.33 LINK C MSE A 169 N ALA A 170 1555 1555 1.33 LINK C PRO A 172 N MSE A 173 1555 1555 1.32 LINK C MSE A 173 N LYS A 174 1555 1555 1.33 LINK C LEU A 264 N MSE A 265 1555 1555 1.32 LINK C MSE A 265 N LEU A 266 1555 1555 1.32 LINK C VAL A 302 N MSE A 303 1555 1555 1.31 LINK C MSE A 303 N TRP A 304 1555 1555 1.33 LINK C LYS A 314 N MSE A 315 1555 1555 1.33 LINK C MSE A 315 N LYS A 316 1555 1555 1.32 LINK C GLU A 325 N MSE A 326 1555 1555 1.33 LINK C MSE A 326 N SER A 327 1555 1555 1.33 LINK ZN ZN A 500 OD1 ASP A 246 1555 1555 2.03 LINK ZN ZN A 500 OD2 ASP A 242 1555 1555 1.79 LINK ZN ZN A 500 OD2 ASP A 244 1555 1555 2.23 SITE 1 AC1 5 SEP A 108 LYS A 118 ASP A 242 ASP A 244 SITE 2 AC1 5 ASP A 246 CRYST1 71.038 73.263 92.354 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014077 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013649 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010828 0.00000