data_1K3X # _entry.id 1K3X # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1K3X pdb_00001k3x 10.2210/pdb1k3x/pdb NDB PD0254 ? ? RCSB RCSB014529 ? ? WWPDB D_1000014529 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-10-04 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 5 'Structure model' 1 4 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_entry_details 8 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.conn_type_id' 4 4 'Structure model' '_struct_conn.id' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1K3X _pdbx_database_status.recvd_initial_deposition_date 2001-10-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Golan, G.' 1 'Zharkov, D.O.' 2 'Gilboa, R.' 3 'Fernandes, A.S.' 4 'Kycia, J.H.' 5 'Gerchman, S.E.' 6 'Rieger, R.A.' 7 'Grollman, A.P.' 8 'Shoham, G.' 9 # _citation.id primary _citation.title 'Structural analysis of an Escherichia coli endonuclease VIII covalent reaction intermediate.' _citation.journal_abbrev 'EMBO J.' _citation.journal_volume 21 _citation.page_first 789 _citation.page_last 800 _citation.year 2002 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11847126 _citation.pdbx_database_id_DOI 10.1093/emboj/21.4.789 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zharkov, D.O.' 1 ? primary 'Golan, G.' 2 ? primary 'Gilboa, R.' 3 ? primary 'Fernandes, A.S.' 4 ? primary 'Gerchman, S.E.' 5 ? primary 'Kycia, J.H.' 6 ? primary 'Rieger, R.A.' 7 ? primary 'Grollman, A.P.' 8 ? primary 'Shoham, G.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*GP*CP*(BRU)P*(BRU)P*CP*AP*(BRU)P*CP*CP*(BRU)P*GP*G)-3'" 4218.051 1 ? ? ? ? 2 polymer syn "5'-D(*CP*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3'" 3863.531 1 ? ? ? ? 3 polymer man 'Endonuclease VIII' 29814.994 1 3.2.2.- ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 7 water nat water 18.015 488 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DG)(DG)(DC)(BRU)(BRU)(DC)(DA)(BRU)(DC)(DC)(BRU)(DG)(DG)' GGCUUCAUCCUGG B ? 2 polydeoxyribonucleotide no yes '(DC)(DC)(DA)(DG)(DG)(DA)(PED)(DG)(DA)(DA)(DG)(DC)(DC)' CCAGGAXGAAGCC C ? 3 'polypeptide(L)' no no ;PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTG EEPQTTRVLRVKLQTADKTILLYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQ AFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCERC GSIIEKTTLSSRPFYWCPGCQH ; ;PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTG EEPQTTRVLRVKLQTADKTILLYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQ AFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCERC GSIIEKTTLSSRPFYWCPGCQH ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 'SULFATE ION' SO4 6 GLYCEROL GOL 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DC n 1 4 BRU n 1 5 BRU n 1 6 DC n 1 7 DA n 1 8 BRU n 1 9 DC n 1 10 DC n 1 11 BRU n 1 12 DG n 1 13 DG n 2 1 DC n 2 2 DC n 2 3 DA n 2 4 DG n 2 5 DG n 2 6 DA n 2 7 PED n 2 8 DG n 2 9 DA n 2 10 DA n 2 11 DG n 2 12 DC n 2 13 DC n 3 1 PRO n 3 2 GLU n 3 3 GLY n 3 4 PRO n 3 5 GLU n 3 6 ILE n 3 7 ARG n 3 8 ARG n 3 9 ALA n 3 10 ALA n 3 11 ASP n 3 12 ASN n 3 13 LEU n 3 14 GLU n 3 15 ALA n 3 16 ALA n 3 17 ILE n 3 18 LYS n 3 19 GLY n 3 20 LYS n 3 21 PRO n 3 22 LEU n 3 23 THR n 3 24 ASP n 3 25 VAL n 3 26 TRP n 3 27 PHE n 3 28 ALA n 3 29 PHE n 3 30 PRO n 3 31 GLN n 3 32 LEU n 3 33 LYS n 3 34 THR n 3 35 TYR n 3 36 GLN n 3 37 SER n 3 38 GLN n 3 39 LEU n 3 40 ILE n 3 41 GLY n 3 42 GLN n 3 43 HIS n 3 44 VAL n 3 45 THR n 3 46 HIS n 3 47 VAL n 3 48 GLU n 3 49 THR n 3 50 ARG n 3 51 GLY n 3 52 LYS n 3 53 ALA n 3 54 LEU n 3 55 LEU n 3 56 THR n 3 57 HIS n 3 58 PHE n 3 59 SER n 3 60 ASN n 3 61 ASP n 3 62 LEU n 3 63 THR n 3 64 LEU n 3 65 TYR n 3 66 SER n 3 67 HIS n 3 68 ASN n 3 69 GLN n 3 70 LEU n 3 71 TYR n 3 72 GLY n 3 73 VAL n 3 74 TRP n 3 75 ARG n 3 76 VAL n 3 77 VAL n 3 78 ASP n 3 79 THR n 3 80 GLY n 3 81 GLU n 3 82 GLU n 3 83 PRO n 3 84 GLN n 3 85 THR n 3 86 THR n 3 87 ARG n 3 88 VAL n 3 89 LEU n 3 90 ARG n 3 91 VAL n 3 92 LYS n 3 93 LEU n 3 94 GLN n 3 95 THR n 3 96 ALA n 3 97 ASP n 3 98 LYS n 3 99 THR n 3 100 ILE n 3 101 LEU n 3 102 LEU n 3 103 TYR n 3 104 SER n 3 105 ALA n 3 106 SER n 3 107 ASP n 3 108 ILE n 3 109 GLU n 3 110 MET n 3 111 LEU n 3 112 ARG n 3 113 PRO n 3 114 GLU n 3 115 GLN n 3 116 LEU n 3 117 THR n 3 118 THR n 3 119 HIS n 3 120 PRO n 3 121 PHE n 3 122 LEU n 3 123 GLN n 3 124 ARG n 3 125 VAL n 3 126 GLY n 3 127 PRO n 3 128 ASP n 3 129 VAL n 3 130 LEU n 3 131 ASP n 3 132 PRO n 3 133 ASN n 3 134 LEU n 3 135 THR n 3 136 PRO n 3 137 GLU n 3 138 VAL n 3 139 VAL n 3 140 LYS n 3 141 GLU n 3 142 ARG n 3 143 LEU n 3 144 LEU n 3 145 SER n 3 146 PRO n 3 147 ARG n 3 148 PHE n 3 149 ARG n 3 150 ASN n 3 151 ARG n 3 152 GLN n 3 153 PHE n 3 154 ALA n 3 155 GLY n 3 156 LEU n 3 157 LEU n 3 158 LEU n 3 159 ASP n 3 160 GLN n 3 161 ALA n 3 162 PHE n 3 163 LEU n 3 164 ALA n 3 165 GLY n 3 166 LEU n 3 167 GLY n 3 168 ASN n 3 169 TYR n 3 170 LEU n 3 171 ARG n 3 172 VAL n 3 173 GLU n 3 174 ILE n 3 175 LEU n 3 176 TRP n 3 177 GLN n 3 178 VAL n 3 179 GLY n 3 180 LEU n 3 181 THR n 3 182 GLY n 3 183 ASN n 3 184 HIS n 3 185 LYS n 3 186 ALA n 3 187 LYS n 3 188 ASP n 3 189 LEU n 3 190 ASN n 3 191 ALA n 3 192 ALA n 3 193 GLN n 3 194 LEU n 3 195 ASP n 3 196 ALA n 3 197 LEU n 3 198 ALA n 3 199 HIS n 3 200 ALA n 3 201 LEU n 3 202 LEU n 3 203 GLU n 3 204 ILE n 3 205 PRO n 3 206 ARG n 3 207 PHE n 3 208 SER n 3 209 TYR n 3 210 ALA n 3 211 THR n 3 212 ARG n 3 213 GLY n 3 214 GLN n 3 215 VAL n 3 216 ASP n 3 217 GLU n 3 218 ASN n 3 219 LYS n 3 220 HIS n 3 221 HIS n 3 222 GLY n 3 223 ALA n 3 224 LEU n 3 225 PHE n 3 226 ARG n 3 227 PHE n 3 228 LYS n 3 229 VAL n 3 230 PHE n 3 231 HIS n 3 232 ARG n 3 233 ASP n 3 234 GLY n 3 235 GLU n 3 236 PRO n 3 237 CYS n 3 238 GLU n 3 239 ARG n 3 240 CYS n 3 241 GLY n 3 242 SER n 3 243 ILE n 3 244 ILE n 3 245 GLU n 3 246 LYS n 3 247 THR n 3 248 THR n 3 249 LEU n 3 250 SER n 3 251 SER n 3 252 ARG n 3 253 PRO n 3 254 PHE n 3 255 TYR n 3 256 TRP n 3 257 CYS n 3 258 PRO n 3 259 GLY n 3 260 CYS n 3 261 GLN n 3 262 HIS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene nei _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PED non-polymer . PENTANE-3,4-DIOL-5-PHOSPHATE ;OPEN FORM OF 1'-2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE ; 'C5 H13 O6 P' 200.127 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 401 ? ? ? B . n A 1 2 DG 2 402 ? ? ? B . n A 1 3 DC 3 403 403 DC CYT B . n A 1 4 BRU 4 404 404 BRU BRU B . n A 1 5 BRU 5 405 405 BRU BRU B . n A 1 6 DC 6 406 406 DC CYT B . n A 1 7 DA 7 407 407 DA ADE B . n A 1 8 BRU 8 408 408 BRU BRU B . n A 1 9 DC 9 409 409 DC CYT B . n A 1 10 DC 10 410 410 DC CYT B . n A 1 11 BRU 11 411 411 BRU BRU B . n A 1 12 DG 12 412 412 DG GUA B . n A 1 13 DG 13 413 ? ? ? B . n B 2 1 DC 1 421 ? ? ? C . n B 2 2 DC 2 422 422 DC CYT C . n B 2 3 DA 3 423 423 DA ADE C . n B 2 4 DG 4 424 424 DG GUA C . n B 2 5 DG 5 425 425 DG GUA C . n B 2 6 DA 6 426 426 DA ADE C . n B 2 7 PED 7 427 427 PED TYG C . n B 2 8 DG 8 428 428 DG GUA C . n B 2 9 DA 9 429 429 DA ADE C . n B 2 10 DA 10 430 430 DA ADE C . n B 2 11 DG 11 431 431 DG GUA C . n B 2 12 DC 12 432 ? ? ? C . n B 2 13 DC 13 433 ? ? ? C . n C 3 1 PRO 1 1 1 PRO PRO A . n C 3 2 GLU 2 2 2 GLU GLU A . n C 3 3 GLY 3 3 3 GLY GLY A . n C 3 4 PRO 4 4 4 PRO PRO A . n C 3 5 GLU 5 5 5 GLU GLU A . n C 3 6 ILE 6 6 6 ILE ILE A . n C 3 7 ARG 7 7 7 ARG ARG A . n C 3 8 ARG 8 8 8 ARG ARG A . n C 3 9 ALA 9 9 9 ALA ALA A . n C 3 10 ALA 10 10 10 ALA ALA A . n C 3 11 ASP 11 11 11 ASP ASP A . n C 3 12 ASN 12 12 12 ASN ASN A . n C 3 13 LEU 13 13 13 LEU LEU A . n C 3 14 GLU 14 14 14 GLU GLU A . n C 3 15 ALA 15 15 15 ALA ALA A . n C 3 16 ALA 16 16 16 ALA ALA A . n C 3 17 ILE 17 17 17 ILE ILE A . n C 3 18 LYS 18 18 18 LYS LYS A . n C 3 19 GLY 19 19 19 GLY GLY A . n C 3 20 LYS 20 20 20 LYS LYS A . n C 3 21 PRO 21 21 21 PRO PRO A . n C 3 22 LEU 22 22 22 LEU LEU A . n C 3 23 THR 23 23 23 THR THR A . n C 3 24 ASP 24 24 24 ASP ASP A . n C 3 25 VAL 25 25 25 VAL VAL A . n C 3 26 TRP 26 26 26 TRP TRP A . n C 3 27 PHE 27 27 27 PHE PHE A . n C 3 28 ALA 28 28 28 ALA ALA A . n C 3 29 PHE 29 29 29 PHE PHE A . n C 3 30 PRO 30 30 30 PRO PRO A . n C 3 31 GLN 31 31 31 GLN GLN A . n C 3 32 LEU 32 32 32 LEU LEU A . n C 3 33 LYS 33 33 33 LYS LYS A . n C 3 34 THR 34 34 34 THR THR A . n C 3 35 TYR 35 35 35 TYR TYR A . n C 3 36 GLN 36 36 36 GLN GLN A . n C 3 37 SER 37 37 37 SER SER A . n C 3 38 GLN 38 38 38 GLN GLN A . n C 3 39 LEU 39 39 39 LEU LEU A . n C 3 40 ILE 40 40 40 ILE ILE A . n C 3 41 GLY 41 41 41 GLY GLY A . n C 3 42 GLN 42 42 42 GLN GLN A . n C 3 43 HIS 43 43 43 HIS HIS A . n C 3 44 VAL 44 44 44 VAL VAL A . n C 3 45 THR 45 45 45 THR THR A . n C 3 46 HIS 46 46 46 HIS HIS A . n C 3 47 VAL 47 47 47 VAL VAL A . n C 3 48 GLU 48 48 48 GLU GLU A . n C 3 49 THR 49 49 49 THR THR A . n C 3 50 ARG 50 50 50 ARG ARG A . n C 3 51 GLY 51 51 51 GLY GLY A . n C 3 52 LYS 52 52 52 LYS LYS A . n C 3 53 ALA 53 53 53 ALA ALA A . n C 3 54 LEU 54 54 54 LEU LEU A . n C 3 55 LEU 55 55 55 LEU LEU A . n C 3 56 THR 56 56 56 THR THR A . n C 3 57 HIS 57 57 57 HIS HIS A . n C 3 58 PHE 58 58 58 PHE PHE A . n C 3 59 SER 59 59 59 SER SER A . n C 3 60 ASN 60 60 60 ASN ASN A . n C 3 61 ASP 61 61 61 ASP ASP A . n C 3 62 LEU 62 62 62 LEU LEU A . n C 3 63 THR 63 63 63 THR THR A . n C 3 64 LEU 64 64 64 LEU LEU A . n C 3 65 TYR 65 65 65 TYR TYR A . n C 3 66 SER 66 66 66 SER SER A . n C 3 67 HIS 67 67 67 HIS HIS A . n C 3 68 ASN 68 68 68 ASN ASN A . n C 3 69 GLN 69 69 69 GLN GLN A . n C 3 70 LEU 70 70 70 LEU LEU A . n C 3 71 TYR 71 71 71 TYR TYR A . n C 3 72 GLY 72 72 72 GLY GLY A . n C 3 73 VAL 73 73 73 VAL VAL A . n C 3 74 TRP 74 74 74 TRP TRP A . n C 3 75 ARG 75 75 75 ARG ARG A . n C 3 76 VAL 76 76 76 VAL VAL A . n C 3 77 VAL 77 77 77 VAL VAL A . n C 3 78 ASP 78 78 78 ASP ASP A . n C 3 79 THR 79 79 79 THR THR A . n C 3 80 GLY 80 80 80 GLY GLY A . n C 3 81 GLU 81 81 81 GLU GLU A . n C 3 82 GLU 82 82 82 GLU ALA A . n C 3 83 PRO 83 83 83 PRO PRO A . n C 3 84 GLN 84 84 84 GLN ALA A . n C 3 85 THR 85 85 85 THR THR A . n C 3 86 THR 86 86 86 THR THR A . n C 3 87 ARG 87 87 87 ARG ARG A . n C 3 88 VAL 88 88 88 VAL VAL A . n C 3 89 LEU 89 89 89 LEU LEU A . n C 3 90 ARG 90 90 90 ARG ARG A . n C 3 91 VAL 91 91 91 VAL VAL A . n C 3 92 LYS 92 92 92 LYS LYS A . n C 3 93 LEU 93 93 93 LEU LEU A . n C 3 94 GLN 94 94 94 GLN GLN A . n C 3 95 THR 95 95 95 THR THR A . n C 3 96 ALA 96 96 96 ALA ALA A . n C 3 97 ASP 97 97 97 ASP ASP A . n C 3 98 LYS 98 98 98 LYS LYS A . n C 3 99 THR 99 99 99 THR THR A . n C 3 100 ILE 100 100 100 ILE ILE A . n C 3 101 LEU 101 101 101 LEU LEU A . n C 3 102 LEU 102 102 102 LEU LEU A . n C 3 103 TYR 103 103 103 TYR TYR A . n C 3 104 SER 104 104 104 SER SER A . n C 3 105 ALA 105 105 105 ALA ALA A . n C 3 106 SER 106 106 106 SER SER A . n C 3 107 ASP 107 107 107 ASP ASP A . n C 3 108 ILE 108 108 108 ILE ILE A . n C 3 109 GLU 109 109 109 GLU GLU A . n C 3 110 MET 110 110 110 MET MET A . n C 3 111 LEU 111 111 111 LEU LEU A . n C 3 112 ARG 112 112 112 ARG ARG A . n C 3 113 PRO 113 113 113 PRO PRO A . n C 3 114 GLU 114 114 114 GLU GLU A . n C 3 115 GLN 115 115 115 GLN GLN A . n C 3 116 LEU 116 116 116 LEU LEU A . n C 3 117 THR 117 117 117 THR THR A . n C 3 118 THR 118 118 118 THR THR A . n C 3 119 HIS 119 119 119 HIS HIS A . n C 3 120 PRO 120 120 120 PRO PRO A . n C 3 121 PHE 121 121 121 PHE PHE A . n C 3 122 LEU 122 122 122 LEU LEU A . n C 3 123 GLN 123 123 123 GLN GLN A . n C 3 124 ARG 124 124 124 ARG ARG A . n C 3 125 VAL 125 125 125 VAL VAL A . n C 3 126 GLY 126 126 126 GLY GLY A . n C 3 127 PRO 127 127 127 PRO PRO A . n C 3 128 ASP 128 128 128 ASP ASP A . n C 3 129 VAL 129 129 129 VAL VAL A . n C 3 130 LEU 130 130 130 LEU LEU A . n C 3 131 ASP 131 131 131 ASP ASP A . n C 3 132 PRO 132 132 132 PRO PRO A . n C 3 133 ASN 133 133 133 ASN ASN A . n C 3 134 LEU 134 134 134 LEU LEU A . n C 3 135 THR 135 135 135 THR THR A . n C 3 136 PRO 136 136 136 PRO PRO A . n C 3 137 GLU 137 137 137 GLU GLU A . n C 3 138 VAL 138 138 138 VAL VAL A . n C 3 139 VAL 139 139 139 VAL VAL A . n C 3 140 LYS 140 140 140 LYS LYS A . n C 3 141 GLU 141 141 141 GLU GLU A . n C 3 142 ARG 142 142 142 ARG ARG A . n C 3 143 LEU 143 143 143 LEU LEU A . n C 3 144 LEU 144 144 144 LEU LEU A . n C 3 145 SER 145 145 145 SER SER A . n C 3 146 PRO 146 146 146 PRO PRO A . n C 3 147 ARG 147 147 147 ARG ARG A . n C 3 148 PHE 148 148 148 PHE PHE A . n C 3 149 ARG 149 149 149 ARG ARG A . n C 3 150 ASN 150 150 150 ASN ASN A . n C 3 151 ARG 151 151 151 ARG ARG A . n C 3 152 GLN 152 152 152 GLN GLN A . n C 3 153 PHE 153 153 153 PHE PHE A . n C 3 154 ALA 154 154 154 ALA ALA A . n C 3 155 GLY 155 155 155 GLY GLY A . n C 3 156 LEU 156 156 156 LEU LEU A . n C 3 157 LEU 157 157 157 LEU LEU A . n C 3 158 LEU 158 158 158 LEU LEU A . n C 3 159 ASP 159 159 159 ASP ASP A . n C 3 160 GLN 160 160 160 GLN GLN A . n C 3 161 ALA 161 161 161 ALA ALA A . n C 3 162 PHE 162 162 162 PHE PHE A . n C 3 163 LEU 163 163 163 LEU LEU A . n C 3 164 ALA 164 164 164 ALA ALA A . n C 3 165 GLY 165 165 165 GLY GLY A . n C 3 166 LEU 166 166 166 LEU LEU A . n C 3 167 GLY 167 167 167 GLY GLY A . n C 3 168 ASN 168 168 168 ASN ASN A . n C 3 169 TYR 169 169 169 TYR TYR A . n C 3 170 LEU 170 170 170 LEU LEU A . n C 3 171 ARG 171 171 171 ARG ARG A . n C 3 172 VAL 172 172 172 VAL VAL A . n C 3 173 GLU 173 173 173 GLU GLU A . n C 3 174 ILE 174 174 174 ILE ILE A . n C 3 175 LEU 175 175 175 LEU LEU A . n C 3 176 TRP 176 176 176 TRP TRP A . n C 3 177 GLN 177 177 177 GLN GLN A . n C 3 178 VAL 178 178 178 VAL VAL A . n C 3 179 GLY 179 179 179 GLY GLY A . n C 3 180 LEU 180 180 180 LEU LEU A . n C 3 181 THR 181 181 181 THR THR A . n C 3 182 GLY 182 182 182 GLY GLY A . n C 3 183 ASN 183 183 183 ASN ASN A . n C 3 184 HIS 184 184 184 HIS HIS A . n C 3 185 LYS 185 185 185 LYS LYS A . n C 3 186 ALA 186 186 186 ALA ALA A . n C 3 187 LYS 187 187 187 LYS LYS A . n C 3 188 ASP 188 188 188 ASP ASP A . n C 3 189 LEU 189 189 189 LEU LEU A . n C 3 190 ASN 190 190 190 ASN ASN A . n C 3 191 ALA 191 191 191 ALA ALA A . n C 3 192 ALA 192 192 192 ALA ALA A . n C 3 193 GLN 193 193 193 GLN GLN A . n C 3 194 LEU 194 194 194 LEU LEU A . n C 3 195 ASP 195 195 195 ASP ASP A . n C 3 196 ALA 196 196 196 ALA ALA A . n C 3 197 LEU 197 197 197 LEU LEU A . n C 3 198 ALA 198 198 198 ALA ALA A . n C 3 199 HIS 199 199 199 HIS HIS A . n C 3 200 ALA 200 200 200 ALA ALA A . n C 3 201 LEU 201 201 201 LEU LEU A . n C 3 202 LEU 202 202 202 LEU LEU A . n C 3 203 GLU 203 203 203 GLU GLU A . n C 3 204 ILE 204 204 204 ILE ILE A . n C 3 205 PRO 205 205 205 PRO PRO A . n C 3 206 ARG 206 206 206 ARG ARG A . n C 3 207 PHE 207 207 207 PHE PHE A . n C 3 208 SER 208 208 208 SER SER A . n C 3 209 TYR 209 209 209 TYR TYR A . n C 3 210 ALA 210 210 210 ALA ALA A . n C 3 211 THR 211 211 211 THR THR A . n C 3 212 ARG 212 212 212 ARG ARG A . n C 3 213 GLY 213 213 213 GLY GLY A . n C 3 214 GLN 214 214 ? ? ? A . n C 3 215 VAL 215 215 ? ? ? A . n C 3 216 ASP 216 216 ? ? ? A . n C 3 217 GLU 217 217 ? ? ? A . n C 3 218 ASN 218 218 ? ? ? A . n C 3 219 LYS 219 219 ? ? ? A . n C 3 220 HIS 220 220 ? ? ? A . n C 3 221 HIS 221 221 ? ? ? A . n C 3 222 GLY 222 222 ? ? ? A . n C 3 223 ALA 223 223 223 ALA ALA A . n C 3 224 LEU 224 224 224 LEU LEU A . n C 3 225 PHE 225 225 225 PHE PHE A . n C 3 226 ARG 226 226 226 ARG ARG A . n C 3 227 PHE 227 227 227 PHE PHE A . n C 3 228 LYS 228 228 228 LYS LYS A . n C 3 229 VAL 229 229 229 VAL VAL A . n C 3 230 PHE 230 230 230 PHE PHE A . n C 3 231 HIS 231 231 231 HIS HIS A . n C 3 232 ARG 232 232 232 ARG ARG A . n C 3 233 ASP 233 233 233 ASP ASP A . n C 3 234 GLY 234 234 234 GLY GLY A . n C 3 235 GLU 235 235 235 GLU GLU A . n C 3 236 PRO 236 236 236 PRO PRO A . n C 3 237 CYS 237 237 237 CYS CYS A . n C 3 238 GLU 238 238 238 GLU GLU A . n C 3 239 ARG 239 239 239 ARG ARG A . n C 3 240 CYS 240 240 240 CYS CYS A . n C 3 241 GLY 241 241 241 GLY GLY A . n C 3 242 SER 242 242 242 SER SER A . n C 3 243 ILE 243 243 243 ILE ILE A . n C 3 244 ILE 244 244 244 ILE ILE A . n C 3 245 GLU 245 245 245 GLU GLU A . n C 3 246 LYS 246 246 246 LYS LYS A . n C 3 247 THR 247 247 247 THR THR A . n C 3 248 THR 248 248 248 THR THR A . n C 3 249 LEU 249 249 249 LEU LEU A . n C 3 250 SER 250 250 250 SER SER A . n C 3 251 SER 251 251 251 SER SER A . n C 3 252 ARG 252 252 252 ARG ARG A . n C 3 253 PRO 253 253 253 PRO PRO A . n C 3 254 PHE 254 254 254 PHE PHE A . n C 3 255 TYR 255 255 255 TYR TYR A . n C 3 256 TRP 256 256 256 TRP TRP A . n C 3 257 CYS 257 257 257 CYS CYS A . n C 3 258 PRO 258 258 258 PRO PRO A . n C 3 259 GLY 259 259 259 GLY GLY A . n C 3 260 CYS 260 260 260 CYS CYS A . n C 3 261 GLN 261 261 261 GLN GLN A . n C 3 262 HIS 262 262 262 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 501 501 ZN ZN2 A . E 5 SO4 1 551 551 SO4 SO4 A . F 5 SO4 1 552 552 SO4 SO4 A . G 5 SO4 1 553 553 SO4 SO4 A . H 5 SO4 1 554 554 SO4 SO4 A . I 5 SO4 1 555 555 SO4 SO4 A . J 6 GOL 1 511 511 GOL GOL A . K 6 GOL 1 512 512 GOL GOL A . L 6 GOL 1 513 513 GOL GOL A . M 6 GOL 1 514 514 GOL GOL A . N 7 HOH 1 723 723 HOH HOH B . N 7 HOH 2 745 745 HOH HOH B . N 7 HOH 3 765 765 HOH HOH B . N 7 HOH 4 772 772 HOH HOH B . N 7 HOH 5 782 782 HOH HOH B . N 7 HOH 6 845 845 HOH HOH B . N 7 HOH 7 874 874 HOH HOH B . N 7 HOH 8 877 877 HOH HOH B . N 7 HOH 9 895 895 HOH HOH B . N 7 HOH 10 903 903 HOH HOH B . N 7 HOH 11 921 921 HOH HOH B . N 7 HOH 12 938 938 HOH HOH B . N 7 HOH 13 942 942 HOH HOH B . N 7 HOH 14 971 971 HOH HOH B . N 7 HOH 15 995 995 HOH HOH B . N 7 HOH 16 1008 1008 HOH HOH B . N 7 HOH 17 1010 1010 HOH HOH B . N 7 HOH 18 1016 1016 HOH HOH B . N 7 HOH 19 1021 1021 HOH HOH B . N 7 HOH 20 1046 1046 HOH HOH B . N 7 HOH 21 1047 1047 HOH HOH B . N 7 HOH 22 1048 1048 HOH HOH B . N 7 HOH 23 1057 1057 HOH HOH B . N 7 HOH 24 1068 1068 HOH HOH B . O 7 HOH 1 638 638 HOH HOH C . O 7 HOH 2 656 656 HOH HOH C . O 7 HOH 3 664 664 HOH HOH C . O 7 HOH 4 668 668 HOH HOH C . O 7 HOH 5 696 696 HOH HOH C . O 7 HOH 6 714 714 HOH HOH C . O 7 HOH 7 755 755 HOH HOH C . O 7 HOH 8 759 759 HOH HOH C . O 7 HOH 9 764 764 HOH HOH C . O 7 HOH 10 790 790 HOH HOH C . O 7 HOH 11 819 819 HOH HOH C . O 7 HOH 12 881 881 HOH HOH C . O 7 HOH 13 885 885 HOH HOH C . O 7 HOH 14 906 906 HOH HOH C . O 7 HOH 15 909 909 HOH HOH C . O 7 HOH 16 946 946 HOH HOH C . O 7 HOH 17 965 965 HOH HOH C . O 7 HOH 18 1031 1031 HOH HOH C . O 7 HOH 19 1036 1036 HOH HOH C . O 7 HOH 20 1042 1042 HOH HOH C . O 7 HOH 21 1063 1063 HOH HOH C . O 7 HOH 22 1066 1066 HOH HOH C . O 7 HOH 23 1072 1072 HOH HOH C . P 7 HOH 1 601 601 HOH HOH A . P 7 HOH 2 602 602 HOH HOH A . P 7 HOH 3 603 603 HOH HOH A . P 7 HOH 4 604 604 HOH HOH A . P 7 HOH 5 605 605 HOH HOH A . P 7 HOH 6 606 606 HOH HOH A . P 7 HOH 7 607 607 HOH HOH A . P 7 HOH 8 608 608 HOH HOH A . P 7 HOH 9 609 609 HOH HOH A . P 7 HOH 10 610 610 HOH HOH A . P 7 HOH 11 611 611 HOH HOH A . P 7 HOH 12 612 612 HOH HOH A . P 7 HOH 13 613 613 HOH HOH A . P 7 HOH 14 614 614 HOH HOH A . P 7 HOH 15 615 615 HOH HOH A . P 7 HOH 16 616 616 HOH HOH A . P 7 HOH 17 617 617 HOH HOH A . P 7 HOH 18 618 618 HOH HOH A . P 7 HOH 19 619 619 HOH HOH A . P 7 HOH 20 620 620 HOH HOH A . P 7 HOH 21 621 621 HOH HOH A . P 7 HOH 22 622 622 HOH HOH A . P 7 HOH 23 623 623 HOH HOH A . P 7 HOH 24 624 624 HOH HOH A . P 7 HOH 25 625 625 HOH HOH A . P 7 HOH 26 626 626 HOH HOH A . P 7 HOH 27 627 627 HOH HOH A . P 7 HOH 28 628 628 HOH HOH A . P 7 HOH 29 629 629 HOH HOH A . P 7 HOH 30 630 630 HOH HOH A . P 7 HOH 31 631 631 HOH HOH A . P 7 HOH 32 632 632 HOH HOH A . P 7 HOH 33 633 633 HOH HOH A . P 7 HOH 34 634 634 HOH HOH A . P 7 HOH 35 635 635 HOH HOH A . P 7 HOH 36 636 636 HOH HOH A . P 7 HOH 37 637 637 HOH HOH A . P 7 HOH 38 639 639 HOH HOH A . P 7 HOH 39 640 640 HOH HOH A . P 7 HOH 40 641 641 HOH HOH A . P 7 HOH 41 642 642 HOH HOH A . P 7 HOH 42 643 643 HOH HOH A . P 7 HOH 43 644 644 HOH HOH A . P 7 HOH 44 645 645 HOH HOH A . P 7 HOH 45 646 646 HOH HOH A . P 7 HOH 46 647 647 HOH HOH A . P 7 HOH 47 648 648 HOH HOH A . P 7 HOH 48 649 649 HOH HOH A . P 7 HOH 49 650 650 HOH HOH A . P 7 HOH 50 651 651 HOH HOH A . P 7 HOH 51 652 652 HOH HOH A . P 7 HOH 52 653 653 HOH HOH A . P 7 HOH 53 654 654 HOH HOH A . P 7 HOH 54 655 655 HOH HOH A . P 7 HOH 55 657 657 HOH HOH A . P 7 HOH 56 658 658 HOH HOH A . P 7 HOH 57 659 659 HOH HOH A . P 7 HOH 58 660 660 HOH HOH A . P 7 HOH 59 661 661 HOH HOH A . P 7 HOH 60 662 662 HOH HOH A . P 7 HOH 61 663 663 HOH HOH A . P 7 HOH 62 665 665 HOH HOH A . P 7 HOH 63 666 666 HOH HOH A . P 7 HOH 64 667 667 HOH HOH A . P 7 HOH 65 669 669 HOH HOH A . P 7 HOH 66 670 670 HOH HOH A . P 7 HOH 67 671 671 HOH HOH A . P 7 HOH 68 672 672 HOH HOH A . P 7 HOH 69 673 673 HOH HOH A . P 7 HOH 70 674 674 HOH HOH A . P 7 HOH 71 675 675 HOH HOH A . P 7 HOH 72 676 676 HOH HOH A . P 7 HOH 73 677 677 HOH HOH A . P 7 HOH 74 678 678 HOH HOH A . P 7 HOH 75 679 679 HOH HOH A . P 7 HOH 76 680 680 HOH HOH A . P 7 HOH 77 681 681 HOH HOH A . P 7 HOH 78 682 682 HOH HOH A . P 7 HOH 79 683 683 HOH HOH A . P 7 HOH 80 684 684 HOH HOH A . P 7 HOH 81 685 685 HOH HOH A . P 7 HOH 82 686 686 HOH HOH A . P 7 HOH 83 687 687 HOH HOH A . P 7 HOH 84 688 688 HOH HOH A . P 7 HOH 85 689 689 HOH HOH A . P 7 HOH 86 690 690 HOH HOH A . P 7 HOH 87 691 691 HOH HOH A . P 7 HOH 88 692 692 HOH HOH A . P 7 HOH 89 693 693 HOH HOH A . P 7 HOH 90 694 694 HOH HOH A . P 7 HOH 91 695 695 HOH HOH A . P 7 HOH 92 697 697 HOH HOH A . P 7 HOH 93 698 698 HOH HOH A . P 7 HOH 94 699 699 HOH HOH A . P 7 HOH 95 700 700 HOH HOH A . P 7 HOH 96 701 701 HOH HOH A . P 7 HOH 97 702 702 HOH HOH A . P 7 HOH 98 703 703 HOH HOH A . P 7 HOH 99 704 704 HOH HOH A . P 7 HOH 100 705 705 HOH HOH A . P 7 HOH 101 706 706 HOH HOH A . P 7 HOH 102 707 707 HOH HOH A . P 7 HOH 103 708 708 HOH HOH A . P 7 HOH 104 709 709 HOH HOH A . P 7 HOH 105 710 710 HOH HOH A . P 7 HOH 106 711 711 HOH HOH A . P 7 HOH 107 712 712 HOH HOH A . P 7 HOH 108 713 713 HOH HOH A . P 7 HOH 109 715 715 HOH HOH A . P 7 HOH 110 716 716 HOH HOH A . P 7 HOH 111 717 717 HOH HOH A . P 7 HOH 112 718 718 HOH HOH A . P 7 HOH 113 719 719 HOH HOH A . P 7 HOH 114 720 720 HOH HOH A . P 7 HOH 115 721 721 HOH HOH A . P 7 HOH 116 722 722 HOH HOH A . P 7 HOH 117 724 724 HOH HOH A . P 7 HOH 118 725 725 HOH HOH A . P 7 HOH 119 726 726 HOH HOH A . P 7 HOH 120 727 727 HOH HOH A . P 7 HOH 121 728 728 HOH HOH A . P 7 HOH 122 729 729 HOH HOH A . P 7 HOH 123 730 730 HOH HOH A . P 7 HOH 124 731 731 HOH HOH A . P 7 HOH 125 732 732 HOH HOH A . P 7 HOH 126 733 733 HOH HOH A . P 7 HOH 127 734 734 HOH HOH A . P 7 HOH 128 735 735 HOH HOH A . P 7 HOH 129 736 736 HOH HOH A . P 7 HOH 130 737 737 HOH HOH A . P 7 HOH 131 738 738 HOH HOH A . P 7 HOH 132 739 739 HOH HOH A . P 7 HOH 133 740 740 HOH HOH A . P 7 HOH 134 741 741 HOH HOH A . P 7 HOH 135 742 742 HOH HOH A . P 7 HOH 136 743 743 HOH HOH A . P 7 HOH 137 744 744 HOH HOH A . P 7 HOH 138 746 746 HOH HOH A . P 7 HOH 139 747 747 HOH HOH A . P 7 HOH 140 748 748 HOH HOH A . P 7 HOH 141 749 749 HOH HOH A . P 7 HOH 142 750 750 HOH HOH A . P 7 HOH 143 751 751 HOH HOH A . P 7 HOH 144 752 752 HOH HOH A . P 7 HOH 145 753 753 HOH HOH A . P 7 HOH 146 754 754 HOH HOH A . P 7 HOH 147 756 756 HOH HOH A . P 7 HOH 148 757 757 HOH HOH A . P 7 HOH 149 758 758 HOH HOH A . P 7 HOH 150 760 760 HOH HOH A . P 7 HOH 151 761 761 HOH HOH A . P 7 HOH 152 762 762 HOH HOH A . P 7 HOH 153 763 763 HOH HOH A . P 7 HOH 154 766 766 HOH HOH A . P 7 HOH 155 767 767 HOH HOH A . P 7 HOH 156 768 768 HOH HOH A . P 7 HOH 157 769 769 HOH HOH A . P 7 HOH 158 770 770 HOH HOH A . P 7 HOH 159 771 771 HOH HOH A . P 7 HOH 160 773 773 HOH HOH A . P 7 HOH 161 774 774 HOH HOH A . P 7 HOH 162 775 775 HOH HOH A . P 7 HOH 163 776 776 HOH HOH A . P 7 HOH 164 777 777 HOH HOH A . P 7 HOH 165 778 778 HOH HOH A . P 7 HOH 166 779 779 HOH HOH A . P 7 HOH 167 780 780 HOH HOH A . P 7 HOH 168 781 781 HOH HOH A . P 7 HOH 169 783 783 HOH HOH A . P 7 HOH 170 784 784 HOH HOH A . P 7 HOH 171 785 785 HOH HOH A . P 7 HOH 172 786 786 HOH HOH A . P 7 HOH 173 787 787 HOH HOH A . P 7 HOH 174 788 788 HOH HOH A . P 7 HOH 175 789 789 HOH HOH A . P 7 HOH 176 791 791 HOH HOH A . P 7 HOH 177 792 792 HOH HOH A . P 7 HOH 178 793 793 HOH HOH A . P 7 HOH 179 794 794 HOH HOH A . P 7 HOH 180 795 795 HOH HOH A . P 7 HOH 181 796 796 HOH HOH A . P 7 HOH 182 797 797 HOH HOH A . P 7 HOH 183 798 798 HOH HOH A . P 7 HOH 184 799 799 HOH HOH A . P 7 HOH 185 800 800 HOH HOH A . P 7 HOH 186 801 801 HOH HOH A . P 7 HOH 187 802 802 HOH HOH A . P 7 HOH 188 803 803 HOH HOH A . P 7 HOH 189 804 804 HOH HOH A . P 7 HOH 190 805 805 HOH HOH A . P 7 HOH 191 806 806 HOH HOH A . P 7 HOH 192 807 807 HOH HOH A . P 7 HOH 193 808 808 HOH HOH A . P 7 HOH 194 809 809 HOH HOH A . P 7 HOH 195 810 810 HOH HOH A . P 7 HOH 196 811 811 HOH HOH A . P 7 HOH 197 812 812 HOH HOH A . P 7 HOH 198 813 813 HOH HOH A . P 7 HOH 199 814 814 HOH HOH A . P 7 HOH 200 815 815 HOH HOH A . P 7 HOH 201 816 816 HOH HOH A . P 7 HOH 202 817 817 HOH HOH A . P 7 HOH 203 818 818 HOH HOH A . P 7 HOH 204 820 820 HOH HOH A . P 7 HOH 205 821 821 HOH HOH A . P 7 HOH 206 822 822 HOH HOH A . P 7 HOH 207 823 823 HOH HOH A . P 7 HOH 208 824 824 HOH HOH A . P 7 HOH 209 825 825 HOH HOH A . P 7 HOH 210 826 826 HOH HOH A . P 7 HOH 211 827 827 HOH HOH A . P 7 HOH 212 828 828 HOH HOH A . P 7 HOH 213 829 829 HOH HOH A . P 7 HOH 214 830 830 HOH HOH A . P 7 HOH 215 831 831 HOH HOH A . P 7 HOH 216 832 832 HOH HOH A . P 7 HOH 217 833 833 HOH HOH A . P 7 HOH 218 834 834 HOH HOH A . P 7 HOH 219 835 835 HOH HOH A . P 7 HOH 220 836 836 HOH HOH A . P 7 HOH 221 837 837 HOH HOH A . P 7 HOH 222 838 838 HOH HOH A . P 7 HOH 223 839 839 HOH HOH A . P 7 HOH 224 840 840 HOH HOH A . P 7 HOH 225 841 841 HOH HOH A . P 7 HOH 226 842 842 HOH HOH A . P 7 HOH 227 843 843 HOH HOH A . P 7 HOH 228 844 844 HOH HOH A . P 7 HOH 229 846 846 HOH HOH A . P 7 HOH 230 847 847 HOH HOH A . P 7 HOH 231 848 848 HOH HOH A . P 7 HOH 232 849 849 HOH HOH A . P 7 HOH 233 850 850 HOH HOH A . P 7 HOH 234 851 851 HOH HOH A . P 7 HOH 235 852 852 HOH HOH A . P 7 HOH 236 853 853 HOH HOH A . P 7 HOH 237 854 854 HOH HOH A . P 7 HOH 238 855 855 HOH HOH A . P 7 HOH 239 856 856 HOH HOH A . P 7 HOH 240 857 857 HOH HOH A . P 7 HOH 241 858 858 HOH HOH A . P 7 HOH 242 859 859 HOH HOH A . P 7 HOH 243 860 860 HOH HOH A . P 7 HOH 244 861 861 HOH HOH A . P 7 HOH 245 862 862 HOH HOH A . P 7 HOH 246 863 863 HOH HOH A . P 7 HOH 247 864 864 HOH HOH A . P 7 HOH 248 865 865 HOH HOH A . P 7 HOH 249 866 866 HOH HOH A . P 7 HOH 250 867 867 HOH HOH A . P 7 HOH 251 868 868 HOH HOH A . P 7 HOH 252 869 869 HOH HOH A . P 7 HOH 253 870 870 HOH HOH A . P 7 HOH 254 871 871 HOH HOH A . P 7 HOH 255 872 872 HOH HOH A . P 7 HOH 256 873 873 HOH HOH A . P 7 HOH 257 875 875 HOH HOH A . P 7 HOH 258 876 876 HOH HOH A . P 7 HOH 259 878 878 HOH HOH A . P 7 HOH 260 879 879 HOH HOH A . P 7 HOH 261 880 880 HOH HOH A . P 7 HOH 262 882 882 HOH HOH A . P 7 HOH 263 883 883 HOH HOH A . P 7 HOH 264 884 884 HOH HOH A . P 7 HOH 265 886 886 HOH HOH A . P 7 HOH 266 887 887 HOH HOH A . P 7 HOH 267 888 888 HOH HOH A . P 7 HOH 268 889 889 HOH HOH A . P 7 HOH 269 890 890 HOH HOH A . P 7 HOH 270 891 891 HOH HOH A . P 7 HOH 271 892 892 HOH HOH A . P 7 HOH 272 893 893 HOH HOH A . P 7 HOH 273 894 894 HOH HOH A . P 7 HOH 274 896 896 HOH HOH A . P 7 HOH 275 897 897 HOH HOH A . P 7 HOH 276 898 898 HOH HOH A . P 7 HOH 277 899 899 HOH HOH A . P 7 HOH 278 900 900 HOH HOH A . P 7 HOH 279 901 901 HOH HOH A . P 7 HOH 280 902 902 HOH HOH A . P 7 HOH 281 904 904 HOH HOH A . P 7 HOH 282 905 905 HOH HOH A . P 7 HOH 283 907 907 HOH HOH A . P 7 HOH 284 908 908 HOH HOH A . P 7 HOH 285 910 910 HOH HOH A . P 7 HOH 286 911 911 HOH HOH A . P 7 HOH 287 912 912 HOH HOH A . P 7 HOH 288 913 913 HOH HOH A . P 7 HOH 289 914 914 HOH HOH A . P 7 HOH 290 915 915 HOH HOH A . P 7 HOH 291 917 917 HOH HOH A . P 7 HOH 292 918 918 HOH HOH A . P 7 HOH 293 919 919 HOH HOH A . P 7 HOH 294 920 920 HOH HOH A . P 7 HOH 295 922 922 HOH HOH A . P 7 HOH 296 923 923 HOH HOH A . P 7 HOH 297 924 924 HOH HOH A . P 7 HOH 298 925 925 HOH HOH A . P 7 HOH 299 926 926 HOH HOH A . P 7 HOH 300 927 927 HOH HOH A . P 7 HOH 301 928 928 HOH HOH A . P 7 HOH 302 929 929 HOH HOH A . P 7 HOH 303 930 930 HOH HOH A . P 7 HOH 304 931 931 HOH HOH A . P 7 HOH 305 932 932 HOH HOH A . P 7 HOH 306 933 933 HOH HOH A . P 7 HOH 307 934 934 HOH HOH A . P 7 HOH 308 935 935 HOH HOH A . P 7 HOH 309 936 936 HOH HOH A . P 7 HOH 310 937 937 HOH HOH A . P 7 HOH 311 939 939 HOH HOH A . P 7 HOH 312 940 940 HOH HOH A . P 7 HOH 313 941 941 HOH HOH A . P 7 HOH 314 943 943 HOH HOH A . P 7 HOH 315 944 944 HOH HOH A . P 7 HOH 316 945 945 HOH HOH A . P 7 HOH 317 947 947 HOH HOH A . P 7 HOH 318 948 948 HOH HOH A . P 7 HOH 319 949 949 HOH HOH A . P 7 HOH 320 950 950 HOH HOH A . P 7 HOH 321 951 951 HOH HOH A . P 7 HOH 322 952 952 HOH HOH A . P 7 HOH 323 953 953 HOH HOH A . P 7 HOH 324 954 954 HOH HOH A . P 7 HOH 325 955 955 HOH HOH A . P 7 HOH 326 956 956 HOH HOH A . P 7 HOH 327 957 957 HOH HOH A . P 7 HOH 328 958 958 HOH HOH A . P 7 HOH 329 959 959 HOH HOH A . P 7 HOH 330 960 960 HOH HOH A . P 7 HOH 331 961 961 HOH HOH A . P 7 HOH 332 962 962 HOH HOH A . P 7 HOH 333 963 963 HOH HOH A . P 7 HOH 334 964 964 HOH HOH A . P 7 HOH 335 966 966 HOH HOH A . P 7 HOH 336 967 967 HOH HOH A . P 7 HOH 337 968 968 HOH HOH A . P 7 HOH 338 969 969 HOH HOH A . P 7 HOH 339 970 970 HOH HOH A . P 7 HOH 340 972 972 HOH HOH A . P 7 HOH 341 973 973 HOH HOH A . P 7 HOH 342 974 974 HOH HOH A . P 7 HOH 343 975 975 HOH HOH A . P 7 HOH 344 976 976 HOH HOH A . P 7 HOH 345 977 977 HOH HOH A . P 7 HOH 346 978 978 HOH HOH A . P 7 HOH 347 979 979 HOH HOH A . P 7 HOH 348 980 980 HOH HOH A . P 7 HOH 349 981 981 HOH HOH A . P 7 HOH 350 982 982 HOH HOH A . P 7 HOH 351 983 983 HOH HOH A . P 7 HOH 352 984 984 HOH HOH A . P 7 HOH 353 985 985 HOH HOH A . P 7 HOH 354 986 986 HOH HOH A . P 7 HOH 355 987 987 HOH HOH A . P 7 HOH 356 988 988 HOH HOH A . P 7 HOH 357 989 989 HOH HOH A . P 7 HOH 358 990 990 HOH HOH A . P 7 HOH 359 991 991 HOH HOH A . P 7 HOH 360 992 992 HOH HOH A . P 7 HOH 361 993 993 HOH HOH A . P 7 HOH 362 994 994 HOH HOH A . P 7 HOH 363 996 996 HOH HOH A . P 7 HOH 364 997 997 HOH HOH A . P 7 HOH 365 998 998 HOH HOH A . P 7 HOH 366 999 999 HOH HOH A . P 7 HOH 367 1000 1000 HOH HOH A . P 7 HOH 368 1001 1001 HOH HOH A . P 7 HOH 369 1002 1002 HOH HOH A . P 7 HOH 370 1003 1003 HOH HOH A . P 7 HOH 371 1004 1004 HOH HOH A . P 7 HOH 372 1005 1005 HOH HOH A . P 7 HOH 373 1007 1007 HOH HOH A . P 7 HOH 374 1009 1009 HOH HOH A . P 7 HOH 375 1011 1011 HOH HOH A . P 7 HOH 376 1012 1012 HOH HOH A . P 7 HOH 377 1013 1013 HOH HOH A . P 7 HOH 378 1014 1014 HOH HOH A . P 7 HOH 379 1015 1015 HOH HOH A . P 7 HOH 380 1017 1017 HOH HOH A . P 7 HOH 381 1018 1018 HOH HOH A . P 7 HOH 382 1019 1019 HOH HOH A . P 7 HOH 383 1020 1020 HOH HOH A . P 7 HOH 384 1022 1022 HOH HOH A . P 7 HOH 385 1023 1023 HOH HOH A . P 7 HOH 386 1024 1024 HOH HOH A . P 7 HOH 387 1025 1025 HOH HOH A . P 7 HOH 388 1026 1026 HOH HOH A . P 7 HOH 389 1027 1027 HOH HOH A . P 7 HOH 390 1028 1028 HOH HOH A . P 7 HOH 391 1029 1029 HOH HOH A . P 7 HOH 392 1030 1030 HOH HOH A . P 7 HOH 393 1032 1032 HOH HOH A . P 7 HOH 394 1033 1033 HOH HOH A . P 7 HOH 395 1034 1034 HOH HOH A . P 7 HOH 396 1035 1035 HOH HOH A . P 7 HOH 397 1037 1037 HOH HOH A . P 7 HOH 398 1038 1038 HOH HOH A . P 7 HOH 399 1039 1039 HOH HOH A . P 7 HOH 400 1040 1040 HOH HOH A . P 7 HOH 401 1041 1041 HOH HOH A . P 7 HOH 402 1043 1043 HOH HOH A . P 7 HOH 403 1044 1044 HOH HOH A . P 7 HOH 404 1045 1045 HOH HOH A . P 7 HOH 405 1049 1049 HOH HOH A . P 7 HOH 406 1050 1050 HOH HOH A . P 7 HOH 407 1051 1051 HOH HOH A . P 7 HOH 408 1052 1052 HOH HOH A . P 7 HOH 409 1054 1054 HOH HOH A . P 7 HOH 410 1055 1055 HOH HOH A . P 7 HOH 411 1056 1056 HOH HOH A . P 7 HOH 412 1058 1058 HOH HOH A . P 7 HOH 413 1059 1059 HOH HOH A . P 7 HOH 414 1060 1060 HOH HOH A . P 7 HOH 415 1061 1061 HOH HOH A . P 7 HOH 416 1062 1062 HOH HOH A . P 7 HOH 417 1064 1064 HOH HOH A . P 7 HOH 418 1067 1067 HOH HOH A . P 7 HOH 419 1069 1069 HOH HOH A . P 7 HOH 420 1070 1070 HOH HOH A . P 7 HOH 421 1071 1071 HOH HOH A . P 7 HOH 422 1073 1073 HOH HOH A . P 7 HOH 423 1074 1074 HOH HOH A . P 7 HOH 424 1075 1075 HOH HOH A . P 7 HOH 425 1076 1076 HOH HOH A . P 7 HOH 426 1077 1077 HOH HOH A . P 7 HOH 427 1078 1078 HOH HOH A . P 7 HOH 428 1079 1079 HOH HOH A . P 7 HOH 429 1080 1080 HOH HOH A . P 7 HOH 430 1081 1081 HOH HOH A . P 7 HOH 431 1082 1082 HOH HOH A . P 7 HOH 432 1083 1083 HOH HOH A . P 7 HOH 433 1084 1084 HOH HOH A . P 7 HOH 434 1085 1085 HOH HOH A . P 7 HOH 435 1086 1086 HOH HOH A . P 7 HOH 436 1087 1087 HOH HOH A . P 7 HOH 437 1088 1088 HOH HOH A . P 7 HOH 438 1089 1089 HOH HOH A . P 7 HOH 439 1090 1090 HOH HOH A . P 7 HOH 440 1091 1091 HOH HOH A . P 7 HOH 441 1092 1092 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 82 ? CG ? C GLU 82 CG 2 1 Y 1 A GLU 82 ? CD ? C GLU 82 CD 3 1 Y 1 A GLU 82 ? OE1 ? C GLU 82 OE1 4 1 Y 1 A GLU 82 ? OE2 ? C GLU 82 OE2 5 1 Y 1 A GLN 84 ? CG ? C GLN 84 CG 6 1 Y 1 A GLN 84 ? CD ? C GLN 84 CD 7 1 Y 1 A GLN 84 ? OE1 ? C GLN 84 OE1 8 1 Y 1 A GLN 84 ? NE2 ? C GLN 84 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SHELX 'model building' . ? 3 SHELXL-97 refinement . ? 4 SHELX phasing . ? 5 # _cell.entry_id 1K3X _cell.length_a 76.495 _cell.length_b 76.495 _cell.length_c 164.310 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K3X _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 # _exptl.entry_id 1K3X _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.99 _exptl_crystal.density_percent_sol 61.11 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 288 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '1.8M Ammonium-Sulfate, 0.1M Sodium-citrate pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 Ammonium-Sulfate ? ? ? 1 2 1 Sodium-citrate ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRANDEIS - B4' _diffrn_detector.pdbx_collection_date 2001-05-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength 0.92 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1K3X _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 1.25 _reflns.number_obs 131559 _reflns.number_all ? _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.06 _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_min ? _reflns.observed_criterion_F_min ? _reflns.limit_h_max ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.25 _reflns_shell.d_res_low 1.27 _reflns_shell.percent_possible_all 91.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.34 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 7.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1K3X _refine.ls_number_reflns_obs 120771 _refine.ls_number_reflns_all 120771 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.25 _refine.ls_percent_reflns_obs 97.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1491 _refine.ls_R_factor_R_free 0.1807 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.3 _refine.ls_number_reflns_R_free 6452 _refine.ls_number_parameters 26922 _refine.ls_number_restraints 32739 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model 'pdb entry 1k3w' _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1K3X _refine_analyze.Luzzati_coordinate_error_obs 0.06 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 8 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 2941.52 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2023 _refine_hist.pdbx_number_atoms_nucleic_acid 401 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 488 _refine_hist.number_atoms_total 2962 _refine_hist.d_res_high 1.25 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.040 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0271 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.100 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.097 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.027 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.059 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.104 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.25 _refine_ls_shell.d_res_low 1.27 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.1491 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.1807 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.3 _refine_ls_shell.number_reflns_R_free 6452 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _pdbx_refine.entry_id 1K3X _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.1491 _pdbx_refine.free_R_factor_no_cutoff 0.1807 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.3 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 6452 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.1445 _pdbx_refine.free_R_factor_4sig_cutoff 0.1751 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.3 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 5614 _pdbx_refine.number_reflns_obs_4sig_cutoff 105531 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 1K3X _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 1K3X _struct.title 'Crystal structure of a trapped reaction intermediate of the DNA repair enzyme Endonuclease VIII with Brominated-DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1K3X _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'HYDROLASE/DNA, HYDROLASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 6 ? N N N 7 ? O N N 7 ? P N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP END8_ECOLI 3 ;PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKPYQSQLIGQHVTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTG EEPQTTRVLRVKLQTADKTILLYSASDIEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQ AFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCERC GSIIEKTTLSSRPFYWCPGCQH ; 1 P50465 ? 2 PDB 1K3X 1 ? ? 1K3X ? 3 PDB 1K3X 2 ? ? 1K3X ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1K3X A 1 ? 262 ? P50465 1 ? 262 ? 1 262 2 2 1K3X B 1 ? 13 ? 1K3X 401 ? 413 ? 401 413 3 3 1K3X C 1 ? 13 ? 1K3X 421 ? 433 ? 421 433 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1K3X THR A 34 ? UNP P50465 PRO 34 'SEE REMARK 999' 34 1 1 1K3X ARG A 112 ? UNP P50465 THR 112 'SEE REMARK 999' 112 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU C 2 ? LYS C 18 ? GLU A 2 LYS A 18 1 ? 17 HELX_P HELX_P2 2 PHE C 29 ? LYS C 33 ? PHE A 29 LYS A 33 5 ? 5 HELX_P HELX_P3 3 THR C 34 ? ILE C 40 ? THR A 34 ILE A 40 1 ? 7 HELX_P HELX_P4 4 GLU C 114 ? HIS C 119 ? GLU A 114 HIS A 119 1 ? 6 HELX_P HELX_P5 5 HIS C 119 ? VAL C 125 ? HIS A 119 VAL A 125 1 ? 7 HELX_P HELX_P6 6 THR C 135 ? SER C 145 ? THR A 135 SER A 145 1 ? 11 HELX_P HELX_P7 7 GLN C 152 ? LEU C 157 ? GLN A 152 LEU A 157 1 ? 6 HELX_P HELX_P8 8 GLY C 167 ? GLY C 179 ? GLY A 167 GLY A 179 1 ? 13 HELX_P HELX_P9 9 LYS C 185 ? LEU C 189 ? LYS A 185 LEU A 189 5 ? 5 HELX_P HELX_P10 10 ASN C 190 ? ARG C 212 ? ASN A 190 ARG A 212 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 3 "O3'" ? ? ? 1_555 A BRU 4 P ? ? B DC 403 B BRU 404 1_555 ? ? ? ? ? ? ? 1.632 ? ? covale2 covale both ? A BRU 4 "O3'" ? ? ? 1_555 A BRU 5 P ? ? B BRU 404 B BRU 405 1_555 ? ? ? ? ? ? ? 1.635 ? ? covale3 covale both ? A BRU 5 "O3'" ? ? ? 1_555 A DC 6 P ? ? B BRU 405 B DC 406 1_555 ? ? ? ? ? ? ? 1.588 ? ? covale4 covale both ? A DA 7 "O3'" ? ? ? 1_555 A BRU 8 P ? ? B DA 407 B BRU 408 1_555 ? ? ? ? ? ? ? 1.621 ? ? covale5 covale both ? A BRU 8 "O3'" ? ? ? 1_555 A DC 9 P ? ? B BRU 408 B DC 409 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale6 covale both ? A DC 10 "O3'" ? ? ? 1_555 A BRU 11 P ? ? B DC 410 B BRU 411 1_555 ? ? ? ? ? ? ? 1.626 ? ? covale7 covale both ? A BRU 11 "O3'" ? ? ? 1_555 A DG 12 P ? ? B BRU 411 B DG 412 1_555 ? ? ? ? ? ? ? 1.635 ? ? covale8 covale one ? B DA 6 "O3'" ? ? ? 1_555 B PED 7 P ? ? C DA 426 C PED 427 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale9 covale one ? B PED 7 "O3'" ? ? ? 1_555 B DG 8 P ? ? C PED 427 C DG 428 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale10 covale one ? B PED 7 "C1'" ? ? ? 1_555 C PRO 1 N ? ? C PED 427 A PRO 1 1_555 ? ? ? ? ? ? ? 1.404 ? ? metalc1 metalc ? ? C CYS 237 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 237 A ZN 501 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc2 metalc ? ? C CYS 240 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 240 A ZN 501 1_555 ? ? ? ? ? ? ? 2.312 ? ? metalc3 metalc ? ? C CYS 257 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 257 A ZN 501 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc4 metalc ? ? C CYS 260 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 260 A ZN 501 1_555 ? ? ? ? ? ? ? 2.305 ? ? hydrog1 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 11 N1 ? ? B DC 403 C DG 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 11 O6 ? ? B DC 403 C DG 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 11 N2 ? ? B DC 403 C DG 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A BRU 4 N3 ? ? ? 1_555 B DA 10 N1 ? ? B BRU 404 C DA 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A BRU 4 O4 ? ? ? 1_555 B DA 10 N6 ? ? B BRU 404 C DA 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A BRU 5 N3 ? ? ? 1_555 B DA 9 N1 ? ? B BRU 405 C DA 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A BRU 5 O4 ? ? ? 1_555 B DA 9 N6 ? ? B BRU 405 C DA 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 8 N1 ? ? B DC 406 C DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 8 O6 ? ? B DC 406 C DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 8 N2 ? ? B DC 406 C DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A BRU 8 N3 ? ? ? 1_555 B DA 6 N1 ? ? B BRU 408 C DA 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A BRU 8 O4 ? ? ? 1_555 B DA 6 N6 ? ? B BRU 408 C DA 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 5 N1 ? ? B DC 409 C DG 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 5 O6 ? ? B DC 409 C DG 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 5 N2 ? ? B DC 409 C DG 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 4 N1 ? ? B DC 410 C DG 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 4 O6 ? ? B DC 410 C DG 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 4 N2 ? ? B DC 410 C DG 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A BRU 11 N3 ? ? ? 1_555 B DA 3 N1 ? ? B BRU 411 C DA 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A BRU 11 O4 ? ? ? 1_555 B DA 3 N6 ? ? B BRU 411 C DA 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 2 N3 ? ? B DG 412 C DC 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 2 O2 ? ? B DG 412 C DC 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 2 N4 ? ? B DG 412 C DC 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 237 ? A CYS 237 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? C CYS 240 ? A CYS 240 ? 1_555 116.3 ? 2 SG ? C CYS 237 ? A CYS 237 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? C CYS 257 ? A CYS 257 ? 1_555 106.4 ? 3 SG ? C CYS 240 ? A CYS 240 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? C CYS 257 ? A CYS 257 ? 1_555 96.4 ? 4 SG ? C CYS 237 ? A CYS 237 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? C CYS 260 ? A CYS 260 ? 1_555 104.8 ? 5 SG ? C CYS 240 ? A CYS 240 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? C CYS 260 ? A CYS 260 ? 1_555 120.5 ? 6 SG ? C CYS 257 ? A CYS 257 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? C CYS 260 ? A CYS 260 ? 1_555 111.7 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id PED _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id 7 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id PRO _pdbx_modification_feature.modified_residue_label_asym_id C _pdbx_modification_feature.modified_residue_label_seq_id 1 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id PED _pdbx_modification_feature.auth_asym_id C _pdbx_modification_feature.auth_seq_id 427 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id PRO _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 1 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom "C1'" _pdbx_modification_feature.modified_residue_id_linking_atom N _pdbx_modification_feature.modified_residue_id PRO _pdbx_modification_feature.ref_pcm_id 5 _pdbx_modification_feature.ref_comp_id PED _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Covalent chemical modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP C 24 ? PHE C 27 ? ASP A 24 PHE A 27 A 2 LEU C 89 ? GLN C 94 ? LEU A 89 GLN A 94 A 3 LYS C 98 ? TYR C 103 ? LYS A 98 TYR A 103 A 4 VAL C 73 ? ASP C 78 ? VAL A 73 ASP A 78 B 1 VAL C 44 ? ARG C 50 ? VAL A 44 ARG A 50 B 2 ALA C 53 ? PHE C 58 ? ALA A 53 PHE A 58 B 3 THR C 63 ? HIS C 67 ? THR A 63 HIS A 67 B 4 ASP C 107 ? LEU C 111 ? ASP A 107 LEU A 111 C 1 GLU C 245 ? LEU C 249 ? GLU A 245 LEU A 249 C 2 ARG C 252 ? TRP C 256 ? ARG A 252 TRP A 256 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP C 24 ? N ASP A 24 O GLN C 94 ? O GLN A 94 A 2 3 N LEU C 93 ? N LEU A 93 O ILE C 100 ? O ILE A 100 A 3 4 O TYR C 103 ? O TYR A 103 N VAL C 73 ? N VAL A 73 B 1 2 N GLU C 48 ? N GLU A 48 O LEU C 55 ? O LEU A 55 B 2 3 N LEU C 54 ? N LEU A 54 O SER C 66 ? O SER A 66 B 3 4 N THR C 63 ? N THR A 63 O LEU C 111 ? O LEU A 111 C 1 2 N GLU C 245 ? N GLU A 245 O TRP C 256 ? O TRP A 256 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'BINDING SITE FOR RESIDUE ZN A 501' AC2 Software A SO4 551 ? 5 'BINDING SITE FOR RESIDUE SO4 A 551' AC3 Software A SO4 552 ? 8 'BINDING SITE FOR RESIDUE SO4 A 552' AC4 Software A SO4 553 ? 6 'BINDING SITE FOR RESIDUE SO4 A 553' AC5 Software A SO4 554 ? 3 'BINDING SITE FOR RESIDUE SO4 A 554' AC6 Software A SO4 555 ? 5 'BINDING SITE FOR RESIDUE SO4 A 555' AC7 Software A GOL 511 ? 4 'BINDING SITE FOR RESIDUE GOL A 511' AC8 Software A GOL 512 ? 7 'BINDING SITE FOR RESIDUE GOL A 512' AC9 Software A GOL 513 ? 10 'BINDING SITE FOR RESIDUE GOL A 513' BC1 Software A GOL 514 ? 6 'BINDING SITE FOR RESIDUE GOL A 514' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 237 ? CYS A 237 . ? 1_555 ? 2 AC1 4 CYS C 240 ? CYS A 240 . ? 1_555 ? 3 AC1 4 CYS C 257 ? CYS A 257 . ? 1_555 ? 4 AC1 4 CYS C 260 ? CYS A 260 . ? 1_555 ? 5 AC2 5 ARG C 8 ? ARG A 8 . ? 1_555 ? 6 AC2 5 ASN C 12 ? ASN A 12 . ? 1_555 ? 7 AC2 5 HOH P . ? HOH A 657 . ? 1_555 ? 8 AC2 5 HOH P . ? HOH A 1022 . ? 1_555 ? 9 AC2 5 HOH P . ? HOH A 1025 . ? 1_555 ? 10 AC3 8 ARG C 112 ? ARG A 112 . ? 4_665 ? 11 AC3 8 LYS C 140 ? LYS A 140 . ? 1_555 ? 12 AC3 8 ALA C 191 ? ALA A 191 . ? 1_555 ? 13 AC3 8 ASP C 195 ? ASP A 195 . ? 1_555 ? 14 AC3 8 HOH P . ? HOH A 665 . ? 1_555 ? 15 AC3 8 HOH P . ? HOH A 757 . ? 8_663 ? 16 AC3 8 HOH P . ? HOH A 856 . ? 1_555 ? 17 AC3 8 HOH P . ? HOH A 957 . ? 1_555 ? 18 AC4 6 ASN C 190 ? ASN A 190 . ? 1_555 ? 19 AC4 6 ALA C 191 ? ALA A 191 . ? 1_555 ? 20 AC4 6 HOH P . ? HOH A 630 . ? 4_665 ? 21 AC4 6 HOH P . ? HOH A 828 . ? 1_555 ? 22 AC4 6 HOH P . ? HOH A 884 . ? 4_665 ? 23 AC4 6 HOH P . ? HOH A 941 . ? 4_665 ? 24 AC5 3 PRO C 1 ? PRO A 1 . ? 1_555 ? 25 AC5 3 HOH P . ? HOH A 681 . ? 1_555 ? 26 AC5 3 HOH P . ? HOH A 961 . ? 1_555 ? 27 AC6 5 HOH P . ? HOH A 648 . ? 1_555 ? 28 AC6 5 HOH P . ? HOH A 652 . ? 1_555 ? 29 AC6 5 HOH P . ? HOH A 734 . ? 1_555 ? 30 AC6 5 HOH P . ? HOH A 994 . ? 1_555 ? 31 AC6 5 HOH P . ? HOH A 1071 . ? 1_555 ? 32 AC7 4 ARG C 147 ? ARG A 147 . ? 1_555 ? 33 AC7 4 ARG C 151 ? ARG A 151 . ? 1_555 ? 34 AC7 4 HOH P . ? HOH A 685 . ? 1_555 ? 35 AC7 4 HOH P . ? HOH A 773 . ? 1_555 ? 36 AC8 7 ASP C 195 ? ASP A 195 . ? 1_555 ? 37 AC8 7 HIS C 199 ? HIS A 199 . ? 1_555 ? 38 AC8 7 HOH P . ? HOH A 684 . ? 1_555 ? 39 AC8 7 HOH P . ? HOH A 691 . ? 1_555 ? 40 AC8 7 HOH P . ? HOH A 722 . ? 4_665 ? 41 AC8 7 HOH P . ? HOH A 752 . ? 4_665 ? 42 AC8 7 HOH P . ? HOH A 932 . ? 1_555 ? 43 AC9 10 SER C 37 ? SER A 37 . ? 6_543 ? 44 AC9 10 GLN C 38 ? GLN A 38 . ? 6_543 ? 45 AC9 10 GLY C 179 ? GLY A 179 . ? 8_653 ? 46 AC9 10 LEU C 180 ? LEU A 180 . ? 8_653 ? 47 AC9 10 HIS C 184 ? HIS A 184 . ? 8_653 ? 48 AC9 10 GLN C 193 ? GLN A 193 . ? 8_653 ? 49 AC9 10 HIS C 262 ? HIS A 262 . ? 8_653 ? 50 AC9 10 HOH P . ? HOH A 671 . ? 6_543 ? 51 AC9 10 HOH P . ? HOH A 689 . ? 8_653 ? 52 AC9 10 HOH P . ? HOH A 737 . ? 1_555 ? 53 BC1 6 THR C 117 ? THR A 117 . ? 1_555 ? 54 BC1 6 ARG C 142 ? ARG A 142 . ? 6_553 ? 55 BC1 6 HOH P . ? HOH A 655 . ? 6_553 ? 56 BC1 6 HOH P . ? HOH A 711 . ? 1_555 ? 57 BC1 6 HOH P . ? HOH A 998 . ? 6_553 ? 58 BC1 6 HOH P . ? HOH A 1054 . ? 6_553 ? # _pdbx_entry_details.entry_id 1K3X _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C4 B DG 412 ? ? C5 B DG 412 ? ? 1.426 1.379 0.047 0.007 N 2 1 C4 C DG 431 ? ? C5 C DG 431 ? ? 1.423 1.379 0.044 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OP1 B DC 403 ? ? P B DC 403 ? ? OP2 B DC 403 ? ? 109.66 119.60 -9.94 1.50 N 2 1 "O4'" B DC 403 ? ? "C1'" B DC 403 ? ? "C2'" B DC 403 ? ? 99.94 105.90 -5.96 0.80 N 3 1 C6 B DC 403 ? ? N1 B DC 403 ? ? C2 B DC 403 ? ? 117.29 120.30 -3.01 0.40 N 4 1 C2 B DC 403 ? ? N3 B DC 403 ? ? C4 B DC 403 ? ? 129.82 119.90 9.92 0.50 N 5 1 N3 B DC 403 ? ? C4 B DC 403 ? ? C5 B DC 403 ? ? 114.43 121.90 -7.47 0.40 N 6 1 C5 B DC 403 ? ? C6 B DC 403 ? ? N1 B DC 403 ? ? 126.52 121.00 5.52 0.50 N 7 1 N3 B DC 403 ? ? C2 B DC 403 ? ? O2 B DC 403 ? ? 126.66 121.90 4.76 0.70 N 8 1 N3 B DC 403 ? ? C4 B DC 403 ? ? N4 B DC 403 ? ? 124.39 118.00 6.39 0.70 N 9 1 "C3'" B BRU 404 ? ? "O3'" B BRU 404 ? ? P B BRU 405 ? ? 110.94 119.70 -8.76 1.20 Y 10 1 "O3'" B BRU 405 ? ? P B DC 406 ? ? OP1 B DC 406 ? ? 117.69 110.50 7.19 1.10 Y 11 1 C2 B DC 406 ? ? N3 B DC 406 ? ? C4 B DC 406 ? ? 123.51 119.90 3.61 0.50 N 12 1 N3 B DC 406 ? ? C4 B DC 406 ? ? C5 B DC 406 ? ? 117.27 121.90 -4.63 0.40 N 13 1 "O3'" B DC 406 ? ? P B DA 407 ? ? OP1 B DA 407 ? ? 117.97 110.50 7.47 1.10 Y 14 1 C2 B DA 407 ? ? N3 B DA 407 ? ? C4 B DA 407 ? ? 113.81 110.60 3.21 0.50 N 15 1 N3 B DA 407 ? ? C4 B DA 407 ? ? C5 B DA 407 ? ? 122.02 126.80 -4.78 0.70 N 16 1 N9 B DA 407 ? ? C4 B DA 407 ? ? C5 B DA 407 ? ? 108.37 105.80 2.57 0.40 N 17 1 N1 B DA 407 ? ? C6 B DA 407 ? ? N6 B DA 407 ? ? 109.98 118.60 -8.62 0.60 N 18 1 C5 B DA 407 ? ? C6 B DA 407 ? ? N6 B DA 407 ? ? 132.21 123.70 8.51 0.80 N 19 1 "O4'" B DC 409 ? ? "C1'" B DC 409 ? ? N1 B DC 409 ? ? 100.29 108.00 -7.71 0.70 N 20 1 C2 B DC 409 ? ? N3 B DC 409 ? ? C4 B DC 409 ? ? 127.54 119.90 7.64 0.50 N 21 1 N3 B DC 409 ? ? C4 B DC 409 ? ? C5 B DC 409 ? ? 115.19 121.90 -6.71 0.40 N 22 1 N1 B DC 409 ? ? C2 B DC 409 ? ? O2 B DC 409 ? ? 114.22 118.90 -4.68 0.60 N 23 1 N3 B DC 409 ? ? C2 B DC 409 ? ? O2 B DC 409 ? ? 129.80 121.90 7.90 0.70 N 24 1 "O3'" B DC 409 ? ? P B DC 410 ? ? OP2 B DC 410 ? ? 118.72 110.50 8.22 1.10 Y 25 1 C2 B DC 410 ? ? N3 B DC 410 ? ? C4 B DC 410 ? ? 126.12 119.90 6.22 0.50 N 26 1 N3 B DC 410 ? ? C4 B DC 410 ? ? C5 B DC 410 ? ? 116.84 121.90 -5.06 0.40 N 27 1 N3 B DC 410 ? ? C4 B DC 410 ? ? N4 B DC 410 ? ? 122.51 118.00 4.51 0.70 N 28 1 C6 B DG 412 ? ? N1 B DG 412 ? ? C2 B DG 412 ? ? 116.02 125.10 -9.08 0.60 N 29 1 N1 B DG 412 ? ? C2 B DG 412 ? ? N3 B DG 412 ? ? 128.12 123.90 4.22 0.60 N 30 1 C2 B DG 412 ? ? N3 B DG 412 ? ? C4 B DG 412 ? ? 120.61 111.90 8.71 0.50 N 31 1 N3 B DG 412 ? ? C4 B DG 412 ? ? C5 B DG 412 ? ? 117.33 128.60 -11.27 0.50 N 32 1 C5 B DG 412 ? ? C6 B DG 412 ? ? N1 B DG 412 ? ? 118.00 111.50 6.50 0.50 N 33 1 C5 B DG 412 ? ? N7 B DG 412 ? ? C8 B DG 412 ? ? 98.43 104.30 -5.87 0.50 N 34 1 N7 B DG 412 ? ? C8 B DG 412 ? ? N9 B DG 412 ? ? 123.20 113.10 10.10 0.50 N 35 1 C8 B DG 412 ? ? N9 B DG 412 ? ? C4 B DG 412 ? ? 98.75 106.40 -7.65 0.40 N 36 1 N9 B DG 412 ? ? C4 B DG 412 ? ? C5 B DG 412 ? ? 108.52 105.40 3.12 0.40 N 37 1 N3 B DG 412 ? ? C4 B DG 412 ? ? N9 B DG 412 ? ? 134.12 126.00 8.12 0.60 N 38 1 C5 B DG 412 ? ? C6 B DG 412 ? ? O6 B DG 412 ? ? 124.46 128.60 -4.14 0.60 N 39 1 "O4'" C DC 422 ? ? "C4'" C DC 422 ? ? "C3'" C DC 422 ? ? 100.74 104.50 -3.76 0.40 N 40 1 "O4'" C DC 422 ? ? "C1'" C DC 422 ? ? N1 C DC 422 ? ? 113.19 108.30 4.89 0.30 N 41 1 C6 C DC 422 ? ? N1 C DC 422 ? ? C2 C DC 422 ? ? 117.31 120.30 -2.99 0.40 N 42 1 C2 C DC 422 ? ? N3 C DC 422 ? ? C4 C DC 422 ? ? 129.42 119.90 9.52 0.50 N 43 1 N3 C DC 422 ? ? C4 C DC 422 ? ? C5 C DC 422 ? ? 114.52 121.90 -7.38 0.40 N 44 1 C5 C DC 422 ? ? C6 C DC 422 ? ? N1 C DC 422 ? ? 126.32 121.00 5.32 0.50 N 45 1 N1 C DC 422 ? ? C2 C DC 422 ? ? O2 C DC 422 ? ? 115.02 118.90 -3.88 0.60 N 46 1 N3 C DC 422 ? ? C2 C DC 422 ? ? O2 C DC 422 ? ? 129.37 121.90 7.47 0.70 N 47 1 C5 C DC 422 ? ? C4 C DC 422 ? ? N4 C DC 422 ? ? 124.59 120.20 4.39 0.70 N 48 1 C6 C DC 422 ? ? N1 C DC 422 ? ? "C1'" C DC 422 ? ? 130.23 120.80 9.43 1.20 N 49 1 "O4'" C DA 423 ? ? "C4'" C DA 423 ? ? "C3'" C DA 423 ? ? 101.52 104.50 -2.98 0.40 N 50 1 C6 C DG 424 ? ? N1 C DG 424 ? ? C2 C DG 424 ? ? 119.20 125.10 -5.90 0.60 N 51 1 N1 C DG 424 ? ? C2 C DG 424 ? ? N3 C DG 424 ? ? 128.92 123.90 5.02 0.60 N 52 1 C2 C DG 424 ? ? N3 C DG 424 ? ? C4 C DG 424 ? ? 115.17 111.90 3.27 0.50 N 53 1 N3 C DG 424 ? ? C4 C DG 424 ? ? C5 C DG 424 ? ? 122.71 128.60 -5.89 0.50 N 54 1 C5 C DG 424 ? ? C6 C DG 424 ? ? N1 C DG 424 ? ? 115.03 111.50 3.53 0.50 N 55 1 C5 C DG 424 ? ? N7 C DG 424 ? ? C8 C DG 424 ? ? 97.83 104.30 -6.47 0.50 N 56 1 N7 C DG 424 ? ? C8 C DG 424 ? ? N9 C DG 424 ? ? 123.21 113.10 10.11 0.50 N 57 1 C8 C DG 424 ? ? N9 C DG 424 ? ? C4 C DG 424 ? ? 98.65 106.40 -7.75 0.40 N 58 1 N9 C DG 424 ? ? C4 C DG 424 ? ? C5 C DG 424 ? ? 108.71 105.40 3.31 0.40 N 59 1 N3 C DG 424 ? ? C2 C DG 424 ? ? N2 C DG 424 ? ? 115.01 119.90 -4.89 0.70 N 60 1 C8 C DG 424 ? ? N9 C DG 424 ? ? "C1'" C DG 424 ? ? 139.65 127.00 12.65 1.30 N 61 1 "O4'" C DG 425 ? ? "C1'" C DG 425 ? ? N9 C DG 425 ? ? 103.63 108.00 -4.37 0.70 N 62 1 C6 C DG 425 ? ? N1 C DG 425 ? ? C2 C DG 425 ? ? 121.36 125.10 -3.74 0.60 N 63 1 C2 C DG 425 ? ? N3 C DG 425 ? ? C4 C DG 425 ? ? 115.87 111.90 3.97 0.50 N 64 1 N3 C DG 425 ? ? C4 C DG 425 ? ? C5 C DG 425 ? ? 123.35 128.60 -5.25 0.50 N 65 1 C5 C DG 425 ? ? N7 C DG 425 ? ? C8 C DG 425 ? ? 99.45 104.30 -4.85 0.50 N 66 1 N7 C DG 425 ? ? C8 C DG 425 ? ? N9 C DG 425 ? ? 120.66 113.10 7.56 0.50 N 67 1 C8 C DG 425 ? ? N9 C DG 425 ? ? C4 C DG 425 ? ? 100.77 106.40 -5.63 0.40 N 68 1 C5 C DG 425 ? ? C6 C DG 425 ? ? O6 C DG 425 ? ? 124.59 128.60 -4.01 0.60 N 69 1 C8 C DG 425 ? ? N9 C DG 425 ? ? "C1'" C DG 425 ? ? 135.87 127.00 8.87 1.30 N 70 1 C6 C DA 426 ? ? N1 C DA 426 ? ? C2 C DA 426 ? ? 123.00 118.60 4.40 0.60 N 71 1 N1 C DA 426 ? ? C2 C DA 426 ? ? N3 C DA 426 ? ? 126.09 129.30 -3.21 0.50 N 72 1 C5 C DA 426 ? ? C6 C DA 426 ? ? N1 C DA 426 ? ? 114.22 117.70 -3.48 0.50 N 73 1 C6 C DG 428 ? ? N1 C DG 428 ? ? C2 C DG 428 ? ? 121.41 125.10 -3.69 0.60 N 74 1 C2 C DG 428 ? ? N3 C DG 428 ? ? C4 C DG 428 ? ? 115.45 111.90 3.55 0.50 N 75 1 C5 C DG 428 ? ? C6 C DG 428 ? ? N1 C DG 428 ? ? 115.43 111.50 3.93 0.50 N 76 1 C4 C DG 428 ? ? C5 C DG 428 ? ? N7 C DG 428 ? ? 113.52 110.80 2.72 0.40 N 77 1 C5 C DG 428 ? ? N7 C DG 428 ? ? C8 C DG 428 ? ? 99.16 104.30 -5.14 0.50 N 78 1 N7 C DG 428 ? ? C8 C DG 428 ? ? N9 C DG 428 ? ? 119.19 113.10 6.09 0.50 N 79 1 C8 C DG 428 ? ? N9 C DG 428 ? ? C4 C DG 428 ? ? 103.11 106.40 -3.29 0.40 N 80 1 C5 C DG 428 ? ? C6 C DG 428 ? ? O6 C DG 428 ? ? 121.04 128.60 -7.56 0.60 N 81 1 "O4'" C DA 429 ? ? "C4'" C DA 429 ? ? "C3'" C DA 429 ? ? 101.72 104.50 -2.78 0.40 N 82 1 "C1'" C DA 429 ? ? "O4'" C DA 429 ? ? "C4'" C DA 429 ? ? 98.58 110.10 -11.52 1.00 N 83 1 "C4'" C DA 429 ? ? "C3'" C DA 429 ? ? "O3'" C DA 429 ? ? 93.23 109.70 -16.47 2.50 N 84 1 "C3'" C DA 429 ? ? "C2'" C DA 429 ? ? "C1'" C DA 429 ? ? 97.13 102.40 -5.27 0.80 N 85 1 "O4'" C DA 429 ? ? "C1'" C DA 429 ? ? "C2'" C DA 429 ? ? 99.66 105.90 -6.24 0.80 N 86 1 "O4'" C DA 429 ? ? "C1'" C DA 429 ? ? N9 C DA 429 ? ? 103.51 108.00 -4.49 0.70 N 87 1 C6 C DA 429 ? ? N1 C DA 429 ? ? C2 C DA 429 ? ? 129.38 118.60 10.78 0.60 N 88 1 N1 C DA 429 ? ? C2 C DA 429 ? ? N3 C DA 429 ? ? 119.47 129.30 -9.83 0.50 N 89 1 C5 C DA 429 ? ? C6 C DA 429 ? ? N1 C DA 429 ? ? 112.13 117.70 -5.57 0.50 N 90 1 C4 C DA 429 ? ? C5 C DA 429 ? ? N7 C DA 429 ? ? 114.37 110.70 3.67 0.50 N 91 1 N7 C DA 429 ? ? C8 C DA 429 ? ? N9 C DA 429 ? ? 108.38 113.80 -5.42 0.50 N 92 1 C8 C DA 429 ? ? N9 C DA 429 ? ? C4 C DA 429 ? ? 111.06 105.80 5.26 0.40 N 93 1 N9 C DA 429 ? ? C4 C DA 429 ? ? C5 C DA 429 ? ? 101.26 105.80 -4.54 0.40 N 94 1 N1 C DA 429 ? ? C6 C DA 429 ? ? N6 C DA 429 ? ? 124.79 118.60 6.19 0.60 N 95 1 OP1 C DA 430 ? ? P C DA 430 ? ? OP2 C DA 430 ? ? 132.93 119.60 13.33 1.50 N 96 1 P C DA 430 ? ? "O5'" C DA 430 ? ? "C5'" C DA 430 ? ? 105.99 120.90 -14.91 1.60 N 97 1 "O4'" C DA 430 ? ? "C1'" C DA 430 ? ? N9 C DA 430 ? ? 111.27 108.30 2.97 0.30 N 98 1 C6 C DA 430 ? ? N1 C DA 430 ? ? C2 C DA 430 ? ? 133.30 118.60 14.70 0.60 N 99 1 N1 C DA 430 ? ? C2 C DA 430 ? ? N3 C DA 430 ? ? 120.19 129.30 -9.11 0.50 N 100 1 C5 C DA 430 ? ? C6 C DA 430 ? ? N1 C DA 430 ? ? 109.26 117.70 -8.44 0.50 N 101 1 C4 C DA 430 ? ? C5 C DA 430 ? ? N7 C DA 430 ? ? 115.12 110.70 4.42 0.50 N 102 1 C8 C DA 430 ? ? N9 C DA 430 ? ? C4 C DA 430 ? ? 109.00 105.80 3.20 0.40 N 103 1 N9 C DA 430 ? ? C4 C DA 430 ? ? C5 C DA 430 ? ? 101.71 105.80 -4.09 0.40 N 104 1 C6 C DA 430 ? ? C5 C DA 430 ? ? N7 C DA 430 ? ? 127.59 132.30 -4.71 0.70 N 105 1 N1 C DA 430 ? ? C6 C DA 430 ? ? N6 C DA 430 ? ? 127.68 118.60 9.08 0.60 N 106 1 C6 C DG 431 ? ? N1 C DG 431 ? ? C2 C DG 431 ? ? 119.38 125.10 -5.72 0.60 N 107 1 C2 C DG 431 ? ? N3 C DG 431 ? ? C4 C DG 431 ? ? 119.72 111.90 7.82 0.50 N 108 1 N3 C DG 431 ? ? C4 C DG 431 ? ? C5 C DG 431 ? ? 118.83 128.60 -9.77 0.50 N 109 1 C5 C DG 431 ? ? C6 C DG 431 ? ? N1 C DG 431 ? ? 116.14 111.50 4.64 0.50 N 110 1 C5 C DG 431 ? ? N7 C DG 431 ? ? C8 C DG 431 ? ? 97.18 104.30 -7.12 0.50 N 111 1 N7 C DG 431 ? ? C8 C DG 431 ? ? N9 C DG 431 ? ? 124.09 113.10 10.99 0.50 N 112 1 C8 C DG 431 ? ? N9 C DG 431 ? ? C4 C DG 431 ? ? 98.32 106.40 -8.08 0.40 N 113 1 N9 C DG 431 ? ? C4 C DG 431 ? ? C5 C DG 431 ? ? 108.40 105.40 3.00 0.40 N 114 1 N3 C DG 431 ? ? C4 C DG 431 ? ? N9 C DG 431 ? ? 132.76 126.00 6.76 0.60 N 115 1 CD A ARG 75 ? ? NE A ARG 75 ? ? CZ A ARG 75 ? ? 142.16 123.60 18.56 1.40 N 116 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH1 A ARG 75 ? ? 125.47 120.30 5.17 0.50 N 117 1 CB A ASP 107 ? B CG A ASP 107 ? B OD1 A ASP 107 ? B 112.54 118.30 -5.76 0.90 N 118 1 CB A ASP 107 ? B CG A ASP 107 ? B OD2 A ASP 107 ? B 124.65 118.30 6.35 0.90 N 119 1 CB A ASP 188 ? ? CG A ASP 188 ? ? OD1 A ASP 188 ? ? 125.30 118.30 7.00 0.90 N 120 1 NE A ARG 206 ? ? CZ A ARG 206 ? ? NH2 A ARG 206 ? ? 117.28 120.30 -3.02 0.50 N 121 1 NE A ARG 226 ? ? CZ A ARG 226 ? ? NH1 A ARG 226 ? ? 117.18 120.30 -3.12 0.50 N 122 1 NE A ARG 232 ? ? CZ A ARG 232 ? ? NH1 A ARG 232 ? ? 125.15 120.30 4.85 0.50 N 123 1 NE A ARG 232 ? ? CZ A ARG 232 ? ? NH2 A ARG 232 ? ? 116.80 120.30 -3.50 0.50 N 124 1 OE1 A GLU 235 ? ? CD A GLU 235 ? ? OE2 A GLU 235 ? ? 114.79 123.30 -8.51 1.20 N 125 1 CD A ARG 239 ? ? NE A ARG 239 ? ? CZ A ARG 239 ? ? 134.45 123.60 10.85 1.40 N 126 1 NE A ARG 239 ? ? CZ A ARG 239 ? ? NH1 A ARG 239 ? ? 124.25 120.30 3.95 0.50 N 127 1 NE A ARG 239 ? ? CZ A ARG 239 ? ? NH2 A ARG 239 ? ? 116.11 120.30 -4.19 0.50 N 128 1 NE A ARG 252 ? ? CZ A ARG 252 ? ? NH2 A ARG 252 ? ? 116.52 120.30 -3.78 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 69 ? ? 52.39 -132.26 2 1 GLU A 82 ? ? -161.50 92.73 3 1 SER A 104 ? ? 77.67 -30.99 4 1 PHE A 162 ? ? -80.73 -76.28 5 1 ASN A 183 ? ? -98.64 54.31 6 1 ASN A 183 ? ? -99.75 58.80 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C4'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id BRU _pdbx_validate_chiral.auth_seq_id 404 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A BRU 4 B BRU 404 ? DU ? 2 A BRU 5 B BRU 405 ? DU ? 3 A BRU 8 B BRU 408 ? DU ? 4 A BRU 11 B BRU 411 ? DU ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 960 ? P HOH . 2 1 A HOH 1067 ? P HOH . 3 1 A HOH 1085 ? P HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B DG 401 ? A DG 1 2 1 Y 1 B DG 402 ? A DG 2 3 1 Y 1 B DG 413 ? A DG 13 4 1 Y 1 C DC 421 ? B DC 1 5 1 Y 1 C DC 432 ? B DC 12 6 1 Y 1 C DC 433 ? B DC 13 7 1 Y 1 A GLN 214 ? C GLN 214 8 1 Y 1 A VAL 215 ? C VAL 215 9 1 Y 1 A ASP 216 ? C ASP 216 10 1 Y 1 A GLU 217 ? C GLU 217 11 1 Y 1 A ASN 218 ? C ASN 218 12 1 Y 1 A LYS 219 ? C LYS 219 13 1 Y 1 A HIS 220 ? C HIS 220 14 1 Y 1 A HIS 221 ? C HIS 221 15 1 Y 1 A GLY 222 ? C GLY 222 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BRU N1 N N N 74 BRU C2 C N N 75 BRU N3 N N N 76 BRU C4 C N N 77 BRU C5 C N N 78 BRU C6 C N N 79 BRU O2 O N N 80 BRU O4 O N N 81 BRU BR BR N N 82 BRU "C1'" C N R 83 BRU "C2'" C N N 84 BRU "C3'" C N S 85 BRU "C4'" C N R 86 BRU "O3'" O N N 87 BRU "O4'" O N N 88 BRU "C5'" C N N 89 BRU "O5'" O N N 90 BRU P P N N 91 BRU OP1 O N N 92 BRU OP2 O N N 93 BRU OP3 O N N 94 BRU HN3 H N N 95 BRU H6 H N N 96 BRU "H1'" H N N 97 BRU "H2'" H N N 98 BRU "H2''" H N N 99 BRU "H3'" H N N 100 BRU "H4'" H N N 101 BRU "HO3'" H N N 102 BRU "H5'" H N N 103 BRU "H5''" H N N 104 BRU HOP2 H N N 105 BRU HOP3 H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 DA OP3 O N N 121 DA P P N N 122 DA OP1 O N N 123 DA OP2 O N N 124 DA "O5'" O N N 125 DA "C5'" C N N 126 DA "C4'" C N R 127 DA "O4'" O N N 128 DA "C3'" C N S 129 DA "O3'" O N N 130 DA "C2'" C N N 131 DA "C1'" C N R 132 DA N9 N Y N 133 DA C8 C Y N 134 DA N7 N Y N 135 DA C5 C Y N 136 DA C6 C Y N 137 DA N6 N N N 138 DA N1 N Y N 139 DA C2 C Y N 140 DA N3 N Y N 141 DA C4 C Y N 142 DA HOP3 H N N 143 DA HOP2 H N N 144 DA "H5'" H N N 145 DA "H5''" H N N 146 DA "H4'" H N N 147 DA "H3'" H N N 148 DA "HO3'" H N N 149 DA "H2'" H N N 150 DA "H2''" H N N 151 DA "H1'" H N N 152 DA H8 H N N 153 DA H61 H N N 154 DA H62 H N N 155 DA H2 H N N 156 DC OP3 O N N 157 DC P P N N 158 DC OP1 O N N 159 DC OP2 O N N 160 DC "O5'" O N N 161 DC "C5'" C N N 162 DC "C4'" C N R 163 DC "O4'" O N N 164 DC "C3'" C N S 165 DC "O3'" O N N 166 DC "C2'" C N N 167 DC "C1'" C N R 168 DC N1 N N N 169 DC C2 C N N 170 DC O2 O N N 171 DC N3 N N N 172 DC C4 C N N 173 DC N4 N N N 174 DC C5 C N N 175 DC C6 C N N 176 DC HOP3 H N N 177 DC HOP2 H N N 178 DC "H5'" H N N 179 DC "H5''" H N N 180 DC "H4'" H N N 181 DC "H3'" H N N 182 DC "HO3'" H N N 183 DC "H2'" H N N 184 DC "H2''" H N N 185 DC "H1'" H N N 186 DC H41 H N N 187 DC H42 H N N 188 DC H5 H N N 189 DC H6 H N N 190 DG OP3 O N N 191 DG P P N N 192 DG OP1 O N N 193 DG OP2 O N N 194 DG "O5'" O N N 195 DG "C5'" C N N 196 DG "C4'" C N R 197 DG "O4'" O N N 198 DG "C3'" C N S 199 DG "O3'" O N N 200 DG "C2'" C N N 201 DG "C1'" C N R 202 DG N9 N Y N 203 DG C8 C Y N 204 DG N7 N Y N 205 DG C5 C Y N 206 DG C6 C N N 207 DG O6 O N N 208 DG N1 N N N 209 DG C2 C N N 210 DG N2 N N N 211 DG N3 N N N 212 DG C4 C Y N 213 DG HOP3 H N N 214 DG HOP2 H N N 215 DG "H5'" H N N 216 DG "H5''" H N N 217 DG "H4'" H N N 218 DG "H3'" H N N 219 DG "HO3'" H N N 220 DG "H2'" H N N 221 DG "H2''" H N N 222 DG "H1'" H N N 223 DG H8 H N N 224 DG H1 H N N 225 DG H21 H N N 226 DG H22 H N N 227 GLN N N N N 228 GLN CA C N S 229 GLN C C N N 230 GLN O O N N 231 GLN CB C N N 232 GLN CG C N N 233 GLN CD C N N 234 GLN OE1 O N N 235 GLN NE2 N N N 236 GLN OXT O N N 237 GLN H H N N 238 GLN H2 H N N 239 GLN HA H N N 240 GLN HB2 H N N 241 GLN HB3 H N N 242 GLN HG2 H N N 243 GLN HG3 H N N 244 GLN HE21 H N N 245 GLN HE22 H N N 246 GLN HXT H N N 247 GLU N N N N 248 GLU CA C N S 249 GLU C C N N 250 GLU O O N N 251 GLU CB C N N 252 GLU CG C N N 253 GLU CD C N N 254 GLU OE1 O N N 255 GLU OE2 O N N 256 GLU OXT O N N 257 GLU H H N N 258 GLU H2 H N N 259 GLU HA H N N 260 GLU HB2 H N N 261 GLU HB3 H N N 262 GLU HG2 H N N 263 GLU HG3 H N N 264 GLU HE2 H N N 265 GLU HXT H N N 266 GLY N N N N 267 GLY CA C N N 268 GLY C C N N 269 GLY O O N N 270 GLY OXT O N N 271 GLY H H N N 272 GLY H2 H N N 273 GLY HA2 H N N 274 GLY HA3 H N N 275 GLY HXT H N N 276 GOL C1 C N N 277 GOL O1 O N N 278 GOL C2 C N N 279 GOL O2 O N N 280 GOL C3 C N N 281 GOL O3 O N N 282 GOL H11 H N N 283 GOL H12 H N N 284 GOL HO1 H N N 285 GOL H2 H N N 286 GOL HO2 H N N 287 GOL H31 H N N 288 GOL H32 H N N 289 GOL HO3 H N N 290 HIS N N N N 291 HIS CA C N S 292 HIS C C N N 293 HIS O O N N 294 HIS CB C N N 295 HIS CG C Y N 296 HIS ND1 N Y N 297 HIS CD2 C Y N 298 HIS CE1 C Y N 299 HIS NE2 N Y N 300 HIS OXT O N N 301 HIS H H N N 302 HIS H2 H N N 303 HIS HA H N N 304 HIS HB2 H N N 305 HIS HB3 H N N 306 HIS HD1 H N N 307 HIS HD2 H N N 308 HIS HE1 H N N 309 HIS HE2 H N N 310 HIS HXT H N N 311 HOH O O N N 312 HOH H1 H N N 313 HOH H2 H N N 314 ILE N N N N 315 ILE CA C N S 316 ILE C C N N 317 ILE O O N N 318 ILE CB C N S 319 ILE CG1 C N N 320 ILE CG2 C N N 321 ILE CD1 C N N 322 ILE OXT O N N 323 ILE H H N N 324 ILE H2 H N N 325 ILE HA H N N 326 ILE HB H N N 327 ILE HG12 H N N 328 ILE HG13 H N N 329 ILE HG21 H N N 330 ILE HG22 H N N 331 ILE HG23 H N N 332 ILE HD11 H N N 333 ILE HD12 H N N 334 ILE HD13 H N N 335 ILE HXT H N N 336 LEU N N N N 337 LEU CA C N S 338 LEU C C N N 339 LEU O O N N 340 LEU CB C N N 341 LEU CG C N N 342 LEU CD1 C N N 343 LEU CD2 C N N 344 LEU OXT O N N 345 LEU H H N N 346 LEU H2 H N N 347 LEU HA H N N 348 LEU HB2 H N N 349 LEU HB3 H N N 350 LEU HG H N N 351 LEU HD11 H N N 352 LEU HD12 H N N 353 LEU HD13 H N N 354 LEU HD21 H N N 355 LEU HD22 H N N 356 LEU HD23 H N N 357 LEU HXT H N N 358 LYS N N N N 359 LYS CA C N S 360 LYS C C N N 361 LYS O O N N 362 LYS CB C N N 363 LYS CG C N N 364 LYS CD C N N 365 LYS CE C N N 366 LYS NZ N N N 367 LYS OXT O N N 368 LYS H H N N 369 LYS H2 H N N 370 LYS HA H N N 371 LYS HB2 H N N 372 LYS HB3 H N N 373 LYS HG2 H N N 374 LYS HG3 H N N 375 LYS HD2 H N N 376 LYS HD3 H N N 377 LYS HE2 H N N 378 LYS HE3 H N N 379 LYS HZ1 H N N 380 LYS HZ2 H N N 381 LYS HZ3 H N N 382 LYS HXT H N N 383 MET N N N N 384 MET CA C N S 385 MET C C N N 386 MET O O N N 387 MET CB C N N 388 MET CG C N N 389 MET SD S N N 390 MET CE C N N 391 MET OXT O N N 392 MET H H N N 393 MET H2 H N N 394 MET HA H N N 395 MET HB2 H N N 396 MET HB3 H N N 397 MET HG2 H N N 398 MET HG3 H N N 399 MET HE1 H N N 400 MET HE2 H N N 401 MET HE3 H N N 402 MET HXT H N N 403 PED P P N N 404 PED O1P O N N 405 PED O2P O N N 406 PED O3P O N N 407 PED "O5'" O N N 408 PED "C2'" C N N 409 PED "C5'" C N N 410 PED "C4'" C N R 411 PED "O4'" O N N 412 PED "C3'" C N S 413 PED "C1'" C N N 414 PED "O3'" O N N 415 PED HOP2 H N N 416 PED HOP3 H N N 417 PED "H2'1" H N N 418 PED "H2'2" H N N 419 PED "H5'1" H N N 420 PED "H5'2" H N N 421 PED "H4'1" H N N 422 PED "HO'4" H N N 423 PED "H3'" H N N 424 PED "H1'1" H N N 425 PED "H1'2" H N N 426 PED "H1'3" H N N 427 PED H3T H N N 428 PHE N N N N 429 PHE CA C N S 430 PHE C C N N 431 PHE O O N N 432 PHE CB C N N 433 PHE CG C Y N 434 PHE CD1 C Y N 435 PHE CD2 C Y N 436 PHE CE1 C Y N 437 PHE CE2 C Y N 438 PHE CZ C Y N 439 PHE OXT O N N 440 PHE H H N N 441 PHE H2 H N N 442 PHE HA H N N 443 PHE HB2 H N N 444 PHE HB3 H N N 445 PHE HD1 H N N 446 PHE HD2 H N N 447 PHE HE1 H N N 448 PHE HE2 H N N 449 PHE HZ H N N 450 PHE HXT H N N 451 PRO N N N N 452 PRO CA C N S 453 PRO C C N N 454 PRO O O N N 455 PRO CB C N N 456 PRO CG C N N 457 PRO CD C N N 458 PRO OXT O N N 459 PRO H H N N 460 PRO HA H N N 461 PRO HB2 H N N 462 PRO HB3 H N N 463 PRO HG2 H N N 464 PRO HG3 H N N 465 PRO HD2 H N N 466 PRO HD3 H N N 467 PRO HXT H N N 468 SER N N N N 469 SER CA C N S 470 SER C C N N 471 SER O O N N 472 SER CB C N N 473 SER OG O N N 474 SER OXT O N N 475 SER H H N N 476 SER H2 H N N 477 SER HA H N N 478 SER HB2 H N N 479 SER HB3 H N N 480 SER HG H N N 481 SER HXT H N N 482 SO4 S S N N 483 SO4 O1 O N N 484 SO4 O2 O N N 485 SO4 O3 O N N 486 SO4 O4 O N N 487 THR N N N N 488 THR CA C N S 489 THR C C N N 490 THR O O N N 491 THR CB C N R 492 THR OG1 O N N 493 THR CG2 C N N 494 THR OXT O N N 495 THR H H N N 496 THR H2 H N N 497 THR HA H N N 498 THR HB H N N 499 THR HG1 H N N 500 THR HG21 H N N 501 THR HG22 H N N 502 THR HG23 H N N 503 THR HXT H N N 504 TRP N N N N 505 TRP CA C N S 506 TRP C C N N 507 TRP O O N N 508 TRP CB C N N 509 TRP CG C Y N 510 TRP CD1 C Y N 511 TRP CD2 C Y N 512 TRP NE1 N Y N 513 TRP CE2 C Y N 514 TRP CE3 C Y N 515 TRP CZ2 C Y N 516 TRP CZ3 C Y N 517 TRP CH2 C Y N 518 TRP OXT O N N 519 TRP H H N N 520 TRP H2 H N N 521 TRP HA H N N 522 TRP HB2 H N N 523 TRP HB3 H N N 524 TRP HD1 H N N 525 TRP HE1 H N N 526 TRP HE3 H N N 527 TRP HZ2 H N N 528 TRP HZ3 H N N 529 TRP HH2 H N N 530 TRP HXT H N N 531 TYR N N N N 532 TYR CA C N S 533 TYR C C N N 534 TYR O O N N 535 TYR CB C N N 536 TYR CG C Y N 537 TYR CD1 C Y N 538 TYR CD2 C Y N 539 TYR CE1 C Y N 540 TYR CE2 C Y N 541 TYR CZ C Y N 542 TYR OH O N N 543 TYR OXT O N N 544 TYR H H N N 545 TYR H2 H N N 546 TYR HA H N N 547 TYR HB2 H N N 548 TYR HB3 H N N 549 TYR HD1 H N N 550 TYR HD2 H N N 551 TYR HE1 H N N 552 TYR HE2 H N N 553 TYR HH H N N 554 TYR HXT H N N 555 VAL N N N N 556 VAL CA C N S 557 VAL C C N N 558 VAL O O N N 559 VAL CB C N N 560 VAL CG1 C N N 561 VAL CG2 C N N 562 VAL OXT O N N 563 VAL H H N N 564 VAL H2 H N N 565 VAL HA H N N 566 VAL HB H N N 567 VAL HG11 H N N 568 VAL HG12 H N N 569 VAL HG13 H N N 570 VAL HG21 H N N 571 VAL HG22 H N N 572 VAL HG23 H N N 573 VAL HXT H N N 574 ZN ZN ZN N N 575 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BRU N1 C2 sing N N 70 BRU N1 C6 sing N N 71 BRU N1 "C1'" sing N N 72 BRU C2 N3 sing N N 73 BRU C2 O2 doub N N 74 BRU N3 C4 sing N N 75 BRU N3 HN3 sing N N 76 BRU C4 C5 sing N N 77 BRU C4 O4 doub N N 78 BRU C5 C6 doub N N 79 BRU C5 BR sing N N 80 BRU C6 H6 sing N N 81 BRU "C1'" "C2'" sing N N 82 BRU "C1'" "O4'" sing N N 83 BRU "C1'" "H1'" sing N N 84 BRU "C2'" "C3'" sing N N 85 BRU "C2'" "H2'" sing N N 86 BRU "C2'" "H2''" sing N N 87 BRU "C3'" "C4'" sing N N 88 BRU "C3'" "O3'" sing N N 89 BRU "C3'" "H3'" sing N N 90 BRU "C4'" "O4'" sing N N 91 BRU "C4'" "C5'" sing N N 92 BRU "C4'" "H4'" sing N N 93 BRU "O3'" "HO3'" sing N N 94 BRU "C5'" "O5'" sing N N 95 BRU "C5'" "H5'" sing N N 96 BRU "C5'" "H5''" sing N N 97 BRU "O5'" P sing N N 98 BRU P OP1 doub N N 99 BRU P OP2 sing N N 100 BRU P OP3 sing N N 101 BRU OP2 HOP2 sing N N 102 BRU OP3 HOP3 sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 DA OP3 P sing N N 117 DA OP3 HOP3 sing N N 118 DA P OP1 doub N N 119 DA P OP2 sing N N 120 DA P "O5'" sing N N 121 DA OP2 HOP2 sing N N 122 DA "O5'" "C5'" sing N N 123 DA "C5'" "C4'" sing N N 124 DA "C5'" "H5'" sing N N 125 DA "C5'" "H5''" sing N N 126 DA "C4'" "O4'" sing N N 127 DA "C4'" "C3'" sing N N 128 DA "C4'" "H4'" sing N N 129 DA "O4'" "C1'" sing N N 130 DA "C3'" "O3'" sing N N 131 DA "C3'" "C2'" sing N N 132 DA "C3'" "H3'" sing N N 133 DA "O3'" "HO3'" sing N N 134 DA "C2'" "C1'" sing N N 135 DA "C2'" "H2'" sing N N 136 DA "C2'" "H2''" sing N N 137 DA "C1'" N9 sing N N 138 DA "C1'" "H1'" sing N N 139 DA N9 C8 sing Y N 140 DA N9 C4 sing Y N 141 DA C8 N7 doub Y N 142 DA C8 H8 sing N N 143 DA N7 C5 sing Y N 144 DA C5 C6 sing Y N 145 DA C5 C4 doub Y N 146 DA C6 N6 sing N N 147 DA C6 N1 doub Y N 148 DA N6 H61 sing N N 149 DA N6 H62 sing N N 150 DA N1 C2 sing Y N 151 DA C2 N3 doub Y N 152 DA C2 H2 sing N N 153 DA N3 C4 sing Y N 154 DC OP3 P sing N N 155 DC OP3 HOP3 sing N N 156 DC P OP1 doub N N 157 DC P OP2 sing N N 158 DC P "O5'" sing N N 159 DC OP2 HOP2 sing N N 160 DC "O5'" "C5'" sing N N 161 DC "C5'" "C4'" sing N N 162 DC "C5'" "H5'" sing N N 163 DC "C5'" "H5''" sing N N 164 DC "C4'" "O4'" sing N N 165 DC "C4'" "C3'" sing N N 166 DC "C4'" "H4'" sing N N 167 DC "O4'" "C1'" sing N N 168 DC "C3'" "O3'" sing N N 169 DC "C3'" "C2'" sing N N 170 DC "C3'" "H3'" sing N N 171 DC "O3'" "HO3'" sing N N 172 DC "C2'" "C1'" sing N N 173 DC "C2'" "H2'" sing N N 174 DC "C2'" "H2''" sing N N 175 DC "C1'" N1 sing N N 176 DC "C1'" "H1'" sing N N 177 DC N1 C2 sing N N 178 DC N1 C6 sing N N 179 DC C2 O2 doub N N 180 DC C2 N3 sing N N 181 DC N3 C4 doub N N 182 DC C4 N4 sing N N 183 DC C4 C5 sing N N 184 DC N4 H41 sing N N 185 DC N4 H42 sing N N 186 DC C5 C6 doub N N 187 DC C5 H5 sing N N 188 DC C6 H6 sing N N 189 DG OP3 P sing N N 190 DG OP3 HOP3 sing N N 191 DG P OP1 doub N N 192 DG P OP2 sing N N 193 DG P "O5'" sing N N 194 DG OP2 HOP2 sing N N 195 DG "O5'" "C5'" sing N N 196 DG "C5'" "C4'" sing N N 197 DG "C5'" "H5'" sing N N 198 DG "C5'" "H5''" sing N N 199 DG "C4'" "O4'" sing N N 200 DG "C4'" "C3'" sing N N 201 DG "C4'" "H4'" sing N N 202 DG "O4'" "C1'" sing N N 203 DG "C3'" "O3'" sing N N 204 DG "C3'" "C2'" sing N N 205 DG "C3'" "H3'" sing N N 206 DG "O3'" "HO3'" sing N N 207 DG "C2'" "C1'" sing N N 208 DG "C2'" "H2'" sing N N 209 DG "C2'" "H2''" sing N N 210 DG "C1'" N9 sing N N 211 DG "C1'" "H1'" sing N N 212 DG N9 C8 sing Y N 213 DG N9 C4 sing Y N 214 DG C8 N7 doub Y N 215 DG C8 H8 sing N N 216 DG N7 C5 sing Y N 217 DG C5 C6 sing N N 218 DG C5 C4 doub Y N 219 DG C6 O6 doub N N 220 DG C6 N1 sing N N 221 DG N1 C2 sing N N 222 DG N1 H1 sing N N 223 DG C2 N2 sing N N 224 DG C2 N3 doub N N 225 DG N2 H21 sing N N 226 DG N2 H22 sing N N 227 DG N3 C4 sing N N 228 GLN N CA sing N N 229 GLN N H sing N N 230 GLN N H2 sing N N 231 GLN CA C sing N N 232 GLN CA CB sing N N 233 GLN CA HA sing N N 234 GLN C O doub N N 235 GLN C OXT sing N N 236 GLN CB CG sing N N 237 GLN CB HB2 sing N N 238 GLN CB HB3 sing N N 239 GLN CG CD sing N N 240 GLN CG HG2 sing N N 241 GLN CG HG3 sing N N 242 GLN CD OE1 doub N N 243 GLN CD NE2 sing N N 244 GLN NE2 HE21 sing N N 245 GLN NE2 HE22 sing N N 246 GLN OXT HXT sing N N 247 GLU N CA sing N N 248 GLU N H sing N N 249 GLU N H2 sing N N 250 GLU CA C sing N N 251 GLU CA CB sing N N 252 GLU CA HA sing N N 253 GLU C O doub N N 254 GLU C OXT sing N N 255 GLU CB CG sing N N 256 GLU CB HB2 sing N N 257 GLU CB HB3 sing N N 258 GLU CG CD sing N N 259 GLU CG HG2 sing N N 260 GLU CG HG3 sing N N 261 GLU CD OE1 doub N N 262 GLU CD OE2 sing N N 263 GLU OE2 HE2 sing N N 264 GLU OXT HXT sing N N 265 GLY N CA sing N N 266 GLY N H sing N N 267 GLY N H2 sing N N 268 GLY CA C sing N N 269 GLY CA HA2 sing N N 270 GLY CA HA3 sing N N 271 GLY C O doub N N 272 GLY C OXT sing N N 273 GLY OXT HXT sing N N 274 GOL C1 O1 sing N N 275 GOL C1 C2 sing N N 276 GOL C1 H11 sing N N 277 GOL C1 H12 sing N N 278 GOL O1 HO1 sing N N 279 GOL C2 O2 sing N N 280 GOL C2 C3 sing N N 281 GOL C2 H2 sing N N 282 GOL O2 HO2 sing N N 283 GOL C3 O3 sing N N 284 GOL C3 H31 sing N N 285 GOL C3 H32 sing N N 286 GOL O3 HO3 sing N N 287 HIS N CA sing N N 288 HIS N H sing N N 289 HIS N H2 sing N N 290 HIS CA C sing N N 291 HIS CA CB sing N N 292 HIS CA HA sing N N 293 HIS C O doub N N 294 HIS C OXT sing N N 295 HIS CB CG sing N N 296 HIS CB HB2 sing N N 297 HIS CB HB3 sing N N 298 HIS CG ND1 sing Y N 299 HIS CG CD2 doub Y N 300 HIS ND1 CE1 doub Y N 301 HIS ND1 HD1 sing N N 302 HIS CD2 NE2 sing Y N 303 HIS CD2 HD2 sing N N 304 HIS CE1 NE2 sing Y N 305 HIS CE1 HE1 sing N N 306 HIS NE2 HE2 sing N N 307 HIS OXT HXT sing N N 308 HOH O H1 sing N N 309 HOH O H2 sing N N 310 ILE N CA sing N N 311 ILE N H sing N N 312 ILE N H2 sing N N 313 ILE CA C sing N N 314 ILE CA CB sing N N 315 ILE CA HA sing N N 316 ILE C O doub N N 317 ILE C OXT sing N N 318 ILE CB CG1 sing N N 319 ILE CB CG2 sing N N 320 ILE CB HB sing N N 321 ILE CG1 CD1 sing N N 322 ILE CG1 HG12 sing N N 323 ILE CG1 HG13 sing N N 324 ILE CG2 HG21 sing N N 325 ILE CG2 HG22 sing N N 326 ILE CG2 HG23 sing N N 327 ILE CD1 HD11 sing N N 328 ILE CD1 HD12 sing N N 329 ILE CD1 HD13 sing N N 330 ILE OXT HXT sing N N 331 LEU N CA sing N N 332 LEU N H sing N N 333 LEU N H2 sing N N 334 LEU CA C sing N N 335 LEU CA CB sing N N 336 LEU CA HA sing N N 337 LEU C O doub N N 338 LEU C OXT sing N N 339 LEU CB CG sing N N 340 LEU CB HB2 sing N N 341 LEU CB HB3 sing N N 342 LEU CG CD1 sing N N 343 LEU CG CD2 sing N N 344 LEU CG HG sing N N 345 LEU CD1 HD11 sing N N 346 LEU CD1 HD12 sing N N 347 LEU CD1 HD13 sing N N 348 LEU CD2 HD21 sing N N 349 LEU CD2 HD22 sing N N 350 LEU CD2 HD23 sing N N 351 LEU OXT HXT sing N N 352 LYS N CA sing N N 353 LYS N H sing N N 354 LYS N H2 sing N N 355 LYS CA C sing N N 356 LYS CA CB sing N N 357 LYS CA HA sing N N 358 LYS C O doub N N 359 LYS C OXT sing N N 360 LYS CB CG sing N N 361 LYS CB HB2 sing N N 362 LYS CB HB3 sing N N 363 LYS CG CD sing N N 364 LYS CG HG2 sing N N 365 LYS CG HG3 sing N N 366 LYS CD CE sing N N 367 LYS CD HD2 sing N N 368 LYS CD HD3 sing N N 369 LYS CE NZ sing N N 370 LYS CE HE2 sing N N 371 LYS CE HE3 sing N N 372 LYS NZ HZ1 sing N N 373 LYS NZ HZ2 sing N N 374 LYS NZ HZ3 sing N N 375 LYS OXT HXT sing N N 376 MET N CA sing N N 377 MET N H sing N N 378 MET N H2 sing N N 379 MET CA C sing N N 380 MET CA CB sing N N 381 MET CA HA sing N N 382 MET C O doub N N 383 MET C OXT sing N N 384 MET CB CG sing N N 385 MET CB HB2 sing N N 386 MET CB HB3 sing N N 387 MET CG SD sing N N 388 MET CG HG2 sing N N 389 MET CG HG3 sing N N 390 MET SD CE sing N N 391 MET CE HE1 sing N N 392 MET CE HE2 sing N N 393 MET CE HE3 sing N N 394 MET OXT HXT sing N N 395 PED P O1P doub N N 396 PED P O2P sing N N 397 PED P O3P sing N N 398 PED P "O5'" sing N N 399 PED O2P HOP2 sing N N 400 PED O3P HOP3 sing N N 401 PED "O5'" "C5'" sing N N 402 PED "C2'" "C3'" sing N N 403 PED "C2'" "C1'" sing N N 404 PED "C2'" "H2'1" sing N N 405 PED "C2'" "H2'2" sing N N 406 PED "C5'" "C4'" sing N N 407 PED "C5'" "H5'1" sing N N 408 PED "C5'" "H5'2" sing N N 409 PED "C4'" "O4'" sing N N 410 PED "C4'" "C3'" sing N N 411 PED "C4'" "H4'1" sing N N 412 PED "O4'" "HO'4" sing N N 413 PED "C3'" "O3'" sing N N 414 PED "C3'" "H3'" sing N N 415 PED "C1'" "H1'1" sing N N 416 PED "C1'" "H1'2" sing N N 417 PED "C1'" "H1'3" sing N N 418 PED "O3'" H3T sing N N 419 PHE N CA sing N N 420 PHE N H sing N N 421 PHE N H2 sing N N 422 PHE CA C sing N N 423 PHE CA CB sing N N 424 PHE CA HA sing N N 425 PHE C O doub N N 426 PHE C OXT sing N N 427 PHE CB CG sing N N 428 PHE CB HB2 sing N N 429 PHE CB HB3 sing N N 430 PHE CG CD1 doub Y N 431 PHE CG CD2 sing Y N 432 PHE CD1 CE1 sing Y N 433 PHE CD1 HD1 sing N N 434 PHE CD2 CE2 doub Y N 435 PHE CD2 HD2 sing N N 436 PHE CE1 CZ doub Y N 437 PHE CE1 HE1 sing N N 438 PHE CE2 CZ sing Y N 439 PHE CE2 HE2 sing N N 440 PHE CZ HZ sing N N 441 PHE OXT HXT sing N N 442 PRO N CA sing N N 443 PRO N CD sing N N 444 PRO N H sing N N 445 PRO CA C sing N N 446 PRO CA CB sing N N 447 PRO CA HA sing N N 448 PRO C O doub N N 449 PRO C OXT sing N N 450 PRO CB CG sing N N 451 PRO CB HB2 sing N N 452 PRO CB HB3 sing N N 453 PRO CG CD sing N N 454 PRO CG HG2 sing N N 455 PRO CG HG3 sing N N 456 PRO CD HD2 sing N N 457 PRO CD HD3 sing N N 458 PRO OXT HXT sing N N 459 SER N CA sing N N 460 SER N H sing N N 461 SER N H2 sing N N 462 SER CA C sing N N 463 SER CA CB sing N N 464 SER CA HA sing N N 465 SER C O doub N N 466 SER C OXT sing N N 467 SER CB OG sing N N 468 SER CB HB2 sing N N 469 SER CB HB3 sing N N 470 SER OG HG sing N N 471 SER OXT HXT sing N N 472 SO4 S O1 doub N N 473 SO4 S O2 doub N N 474 SO4 S O3 sing N N 475 SO4 S O4 sing N N 476 THR N CA sing N N 477 THR N H sing N N 478 THR N H2 sing N N 479 THR CA C sing N N 480 THR CA CB sing N N 481 THR CA HA sing N N 482 THR C O doub N N 483 THR C OXT sing N N 484 THR CB OG1 sing N N 485 THR CB CG2 sing N N 486 THR CB HB sing N N 487 THR OG1 HG1 sing N N 488 THR CG2 HG21 sing N N 489 THR CG2 HG22 sing N N 490 THR CG2 HG23 sing N N 491 THR OXT HXT sing N N 492 TRP N CA sing N N 493 TRP N H sing N N 494 TRP N H2 sing N N 495 TRP CA C sing N N 496 TRP CA CB sing N N 497 TRP CA HA sing N N 498 TRP C O doub N N 499 TRP C OXT sing N N 500 TRP CB CG sing N N 501 TRP CB HB2 sing N N 502 TRP CB HB3 sing N N 503 TRP CG CD1 doub Y N 504 TRP CG CD2 sing Y N 505 TRP CD1 NE1 sing Y N 506 TRP CD1 HD1 sing N N 507 TRP CD2 CE2 doub Y N 508 TRP CD2 CE3 sing Y N 509 TRP NE1 CE2 sing Y N 510 TRP NE1 HE1 sing N N 511 TRP CE2 CZ2 sing Y N 512 TRP CE3 CZ3 doub Y N 513 TRP CE3 HE3 sing N N 514 TRP CZ2 CH2 doub Y N 515 TRP CZ2 HZ2 sing N N 516 TRP CZ3 CH2 sing Y N 517 TRP CZ3 HZ3 sing N N 518 TRP CH2 HH2 sing N N 519 TRP OXT HXT sing N N 520 TYR N CA sing N N 521 TYR N H sing N N 522 TYR N H2 sing N N 523 TYR CA C sing N N 524 TYR CA CB sing N N 525 TYR CA HA sing N N 526 TYR C O doub N N 527 TYR C OXT sing N N 528 TYR CB CG sing N N 529 TYR CB HB2 sing N N 530 TYR CB HB3 sing N N 531 TYR CG CD1 doub Y N 532 TYR CG CD2 sing Y N 533 TYR CD1 CE1 sing Y N 534 TYR CD1 HD1 sing N N 535 TYR CD2 CE2 doub Y N 536 TYR CD2 HD2 sing N N 537 TYR CE1 CZ doub Y N 538 TYR CE1 HE1 sing N N 539 TYR CE2 CZ sing Y N 540 TYR CE2 HE2 sing N N 541 TYR CZ OH sing N N 542 TYR OH HH sing N N 543 TYR OXT HXT sing N N 544 VAL N CA sing N N 545 VAL N H sing N N 546 VAL N H2 sing N N 547 VAL CA C sing N N 548 VAL CA CB sing N N 549 VAL CA HA sing N N 550 VAL C O doub N N 551 VAL C OXT sing N N 552 VAL CB CG1 sing N N 553 VAL CB CG2 sing N N 554 VAL CB HB sing N N 555 VAL CG1 HG11 sing N N 556 VAL CG1 HG12 sing N N 557 VAL CG1 HG13 sing N N 558 VAL CG2 HG21 sing N N 559 VAL CG2 HG22 sing N N 560 VAL CG2 HG23 sing N N 561 VAL OXT HXT sing N N 562 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1K3X 'double helix' 1K3X 'b-form double helix' 1K3X 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 3 1_555 B DG 11 1_555 1.136 -0.741 0.050 4.300 -9.862 -0.368 1 B_DC403:DG431_C B 403 ? C 431 ? 19 1 1 A BRU 4 1_555 B DA 10 1_555 -0.599 -0.474 0.255 -20.735 -15.268 -9.178 2 B_BRU404:DA430_C B 404 ? C 430 ? 20 1 1 A BRU 5 1_555 B DA 9 1_555 -0.003 -0.426 -0.198 -9.474 -3.825 -2.578 3 B_BRU405:DA429_C B 405 ? C 429 ? 20 1 1 A DC 6 1_555 B DG 8 1_555 0.335 -0.254 0.084 4.701 3.869 -0.998 4 B_DC406:DG428_C B 406 ? C 428 ? 19 1 1 A BRU 8 1_555 B DA 6 1_555 -0.054 -0.194 0.140 -8.938 -10.550 3.087 5 B_BRU408:DA426_C B 408 ? C 426 ? 20 1 1 A DC 9 1_555 B DG 5 1_555 0.316 -0.282 -0.106 2.797 -11.387 0.794 6 B_DC409:DG425_C B 409 ? C 425 ? 19 1 1 A DC 10 1_555 B DG 4 1_555 0.146 0.101 -0.027 -4.311 -5.420 3.379 7 B_DC410:DG424_C B 410 ? C 424 ? 19 1 1 A BRU 11 1_555 B DA 3 1_555 -0.043 -0.179 0.175 -10.451 -15.302 -2.713 8 B_BRU411:DA423_C B 411 ? C 423 ? 20 1 1 A DG 12 1_555 B DC 2 1_555 0.171 -0.103 -0.348 -8.941 -5.472 -3.170 9 B_DG412:DC422_C B 412 ? C 422 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 3 1_555 B DG 11 1_555 A BRU 4 1_555 B DA 10 1_555 -0.009 0.171 3.581 5.462 7.749 40.225 -0.676 0.660 3.522 11.082 -7.811 41.282 1 BB_DC403BRU404:DA430DG431_CC B 403 ? C 431 ? B 404 ? C 430 ? 1 A BRU 4 1_555 B DA 10 1_555 A BRU 5 1_555 B DA 9 1_555 0.101 -0.164 3.140 -0.184 -3.264 41.165 0.105 -0.163 3.143 -4.633 0.261 41.289 2 BB_BRU404BRU405:DA429DA430_CC B 404 ? C 430 ? B 405 ? C 429 ? 1 A BRU 5 1_555 B DA 9 1_555 A DC 6 1_555 B DG 8 1_555 -0.170 -0.418 3.156 -3.434 1.982 29.228 -1.229 -0.371 3.120 3.906 6.765 29.490 3 BB_BRU405DC406:DG428DA429_CC B 405 ? C 429 ? B 406 ? C 428 ? 1 A DC 6 1_555 B DG 8 1_555 A BRU 8 1_555 B DA 6 1_555 -0.400 -0.618 7.298 6.221 45.376 49.272 -4.700 0.933 5.133 44.960 -6.164 66.281 4 BB_DC406BRU408:DA426DG428_CC B 406 ? C 428 ? B 408 ? C 426 ? 1 A BRU 8 1_555 B DA 6 1_555 A DC 9 1_555 B DG 5 1_555 0.235 0.225 3.027 1.173 1.765 36.707 0.134 -0.225 3.040 2.800 -1.860 36.766 5 BB_BRU408DC409:DG425DA426_CC B 408 ? C 426 ? B 409 ? C 425 ? 1 A DC 9 1_555 B DG 5 1_555 A DC 10 1_555 B DG 4 1_555 1.044 0.189 3.415 4.960 9.768 33.613 -1.245 -0.931 3.449 16.360 -8.307 35.305 6 BB_DC409DC410:DG424DG425_CC B 409 ? C 425 ? B 410 ? C 424 ? 1 A DC 10 1_555 B DG 4 1_555 A BRU 11 1_555 B DA 3 1_555 -1.211 0.199 3.431 -1.901 -0.258 35.223 0.369 1.700 3.488 -0.426 3.139 35.273 7 BB_DC410BRU411:DA423DG424_CC B 410 ? C 424 ? B 411 ? C 423 ? 1 A BRU 11 1_555 B DA 3 1_555 A DG 12 1_555 B DC 2 1_555 0.626 2.121 3.383 3.102 3.068 45.522 2.446 -0.519 3.544 3.954 -3.999 45.719 8 BB_BRU411DG412:DC422DA423_CC B 411 ? C 423 ? B 412 ? C 422 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1K3W _pdbx_initial_refinement_model.details 'pdb entry 1k3w' # _atom_sites.entry_id 1K3X _atom_sites.fract_transf_matrix[1][1] 0.013073 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013073 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006086 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C N O P S ZN # loop_