HEADER TRANSFERASE 09-OCT-01 1K4V TITLE 1.53 A CRYSTAL STRUCTURE OF THE BETA-GALACTOSIDE-ALPHA-1,3- TITLE 2 GALACTOSYLTRANSFERASE IN COMPLEX WITH UDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (80-368); COMPND 5 SYNONYM: GALACTOSYLTRANSFERASE; COMPND 6 EC: 2.4.1.151; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH5-ALPHA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSV-SPORT KEYWDS ALPHA-1, 3-GALACTOSYLTRANSFERASE-UDP COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.BOIX,G.J.SWAMINATHAN,Y.ZHANG,R.NATESH,K.BREW,K.R.ACHARYA REVDAT 4 16-AUG-23 1K4V 1 REMARK LINK REVDAT 3 13-JUL-11 1K4V 1 VERSN REVDAT 2 24-FEB-09 1K4V 1 VERSN REVDAT 1 10-APR-02 1K4V 0 JRNL AUTH E.BOIX,G.J.SWAMINATHAN,Y.ZHANG,R.NATESH,K.BREW,K.R.ACHARYA JRNL TITL STRUCTURE OF UDP COMPLEX OF JRNL TITL 2 UDP-GALACTOSE:BETA-GALACTOSIDE-ALPHA JRNL TITL 3 -1,3-GALACTOSYLTRANSFERASE AT 1.53-A RESOLUTION REVEALS A JRNL TITL 4 CONFORMATIONAL CHANGE IN THE CATALYTICALLY IMPORTANT C JRNL TITL 5 TERMINUS. JRNL REF J.BIOL.CHEM. V. 276 48608 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11592969 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.140 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1133 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 114924 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.119 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 914.00 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 92101 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4786 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 747 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 5567.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 4647.0 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 19 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 50327 REMARK 3 NUMBER OF RESTRAINTS : 61066 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 ANGLE DISTANCES (A) : 0.028 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228 REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1K4V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-OCT-01. REMARK 100 THE DEPOSITION ID IS D_1000014563. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.909 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 114924 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.370 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.49700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1G93 REMARK 200 REMARK 200 REMARK: THE SECOND MOLECULE IN THE ASYMMETRIC UNIT, NAMED AS REMARK 200 B CHAIN HAS NUMBERS STARTING WITH 1000, IN ACCORDANCE REMARK 200 WITH SHELXL CONVENTIONS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG6000, TRIS/HCL, PH 8, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.07250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). THE BIOLOGICAL UNIT IS A REMARK 300 MONOMER. SEE REMARK 350 FOR INFORMATION ON GENERATING REMARK 300 THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 80 REMARK 465 SER A 81 REMARK 465 GLU B 1080 REMARK 465 SER B 1081 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL B1368 C VAL B1368 OXT 0.795 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B1115 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B1194 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B1194 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ASP B1219 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B1263 NE - CZ - NH1 ANGL. DEV. = -4.1 DEGREES REMARK 500 TYR B1361 CB - CG - CD2 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 175 79.11 -101.75 REMARK 500 HIS A 213 -37.61 -153.73 REMARK 500 THR A 259 48.11 -88.07 REMARK 500 HIS A 315 -129.58 51.72 REMARK 500 CYS A 338 77.64 -161.83 REMARK 500 HIS B1213 -38.27 -151.53 REMARK 500 THR B1259 49.66 -85.64 REMARK 500 HIS B1315 -131.90 52.45 REMARK 500 CYS B1338 81.10 -166.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 UDP 401 AND GOL 404 CORRESPOND TO CHAIN A AND, REMARK 600 UDP 1401 AND GOL 1404 CORRESPOND TO CHAIN B. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 225 OD2 REMARK 620 2 ASP A 227 OD1 97.9 REMARK 620 3 ASP A 227 OD2 155.0 57.3 REMARK 620 4 UDP A 401 O1A 96.3 83.9 79.3 REMARK 620 5 UDP A 401 O1B 101.8 160.2 102.9 92.1 REMARK 620 6 HOH A2750 O 93.8 98.4 93.1 169.2 82.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B1225 OD2 REMARK 620 2 ASP B1227 OD1 98.9 REMARK 620 3 ASP B1227 OD2 155.3 56.6 REMARK 620 4 UDP B1401 O1B 100.9 160.0 103.4 REMARK 620 5 UDP B1401 O1A 97.0 82.3 77.8 92.2 REMARK 620 6 HOH B2751 O 96.3 98.5 91.3 82.5 166.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP B 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1G8O RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC STRUCTURE OF THE NATIVE BOVINE -1,3- REMARK 900 GALACTOSYLTRANSFERASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 1G93 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE BOVINE CATALYTIC DOMAIN OF -1, 3- REMARK 900 GALACTOSYLTRANSFERASE IN THE PRESENCE OF UDP-GALACTOSE DBREF 1K4V A 80 368 UNP P14769 GGTA1_BOVIN 80 368 DBREF 1K4V B 1080 1368 UNP P14769 GGTA1_BOVIN 80 368 SEQRES 1 A 289 GLU SER LYS LEU LYS LEU SER ASP TRP PHE ASN PRO PHE SEQRES 2 A 289 LYS ARG PRO GLU VAL VAL THR MET THR LYS TRP LYS ALA SEQRES 3 A 289 PRO VAL VAL TRP GLU GLY THR TYR ASN ARG ALA VAL LEU SEQRES 4 A 289 ASP ASN TYR TYR ALA LYS GLN LYS ILE THR VAL GLY LEU SEQRES 5 A 289 THR VAL PHE ALA VAL GLY ARG TYR ILE GLU HIS TYR LEU SEQRES 6 A 289 GLU GLU PHE LEU THR SER ALA ASN LYS HIS PHE MET VAL SEQRES 7 A 289 GLY HIS PRO VAL ILE PHE TYR ILE MET VAL ASP ASP VAL SEQRES 8 A 289 SER ARG MET PRO LEU ILE GLU LEU GLY PRO LEU ARG SER SEQRES 9 A 289 PHE LYS VAL PHE LYS ILE LYS PRO GLU LYS ARG TRP GLN SEQRES 10 A 289 ASP ILE SER MET MET ARG MET LYS THR ILE GLY GLU HIS SEQRES 11 A 289 ILE VAL ALA HIS ILE GLN HIS GLU VAL ASP PHE LEU PHE SEQRES 12 A 289 CYS MET ASP VAL ASP GLN VAL PHE GLN ASP LYS PHE GLY SEQRES 13 A 289 VAL GLU THR LEU GLY GLU SER VAL ALA GLN LEU GLN ALA SEQRES 14 A 289 TRP TRP TYR LYS ALA ASP PRO ASN ASP PHE THR TYR GLU SEQRES 15 A 289 ARG ARG LYS GLU SER ALA ALA TYR ILE PRO PHE GLY GLU SEQRES 16 A 289 GLY ASP PHE TYR TYR HIS ALA ALA ILE PHE GLY GLY THR SEQRES 17 A 289 PRO THR GLN VAL LEU ASN ILE THR GLN GLU CYS PHE LYS SEQRES 18 A 289 GLY ILE LEU LYS ASP LYS LYS ASN ASP ILE GLU ALA GLN SEQRES 19 A 289 TRP HIS ASP GLU SER HIS LEU ASN LYS TYR PHE LEU LEU SEQRES 20 A 289 ASN LYS PRO THR LYS ILE LEU SER PRO GLU TYR CYS TRP SEQRES 21 A 289 ASP TYR HIS ILE GLY LEU PRO ALA ASP ILE LYS LEU VAL SEQRES 22 A 289 LYS MET SER TRP GLN THR LYS GLU TYR ASN VAL VAL ARG SEQRES 23 A 289 ASN ASN VAL SEQRES 1 B 289 GLU SER LYS LEU LYS LEU SER ASP TRP PHE ASN PRO PHE SEQRES 2 B 289 LYS ARG PRO GLU VAL VAL THR MET THR LYS TRP LYS ALA SEQRES 3 B 289 PRO VAL VAL TRP GLU GLY THR TYR ASN ARG ALA VAL LEU SEQRES 4 B 289 ASP ASN TYR TYR ALA LYS GLN LYS ILE THR VAL GLY LEU SEQRES 5 B 289 THR VAL PHE ALA VAL GLY ARG TYR ILE GLU HIS TYR LEU SEQRES 6 B 289 GLU GLU PHE LEU THR SER ALA ASN LYS HIS PHE MET VAL SEQRES 7 B 289 GLY HIS PRO VAL ILE PHE TYR ILE MET VAL ASP ASP VAL SEQRES 8 B 289 SER ARG MET PRO LEU ILE GLU LEU GLY PRO LEU ARG SER SEQRES 9 B 289 PHE LYS VAL PHE LYS ILE LYS PRO GLU LYS ARG TRP GLN SEQRES 10 B 289 ASP ILE SER MET MET ARG MET LYS THR ILE GLY GLU HIS SEQRES 11 B 289 ILE VAL ALA HIS ILE GLN HIS GLU VAL ASP PHE LEU PHE SEQRES 12 B 289 CYS MET ASP VAL ASP GLN VAL PHE GLN ASP LYS PHE GLY SEQRES 13 B 289 VAL GLU THR LEU GLY GLU SER VAL ALA GLN LEU GLN ALA SEQRES 14 B 289 TRP TRP TYR LYS ALA ASP PRO ASN ASP PHE THR TYR GLU SEQRES 15 B 289 ARG ARG LYS GLU SER ALA ALA TYR ILE PRO PHE GLY GLU SEQRES 16 B 289 GLY ASP PHE TYR TYR HIS ALA ALA ILE PHE GLY GLY THR SEQRES 17 B 289 PRO THR GLN VAL LEU ASN ILE THR GLN GLU CYS PHE LYS SEQRES 18 B 289 GLY ILE LEU LYS ASP LYS LYS ASN ASP ILE GLU ALA GLN SEQRES 19 B 289 TRP HIS ASP GLU SER HIS LEU ASN LYS TYR PHE LEU LEU SEQRES 20 B 289 ASN LYS PRO THR LYS ILE LEU SER PRO GLU TYR CYS TRP SEQRES 21 B 289 ASP TYR HIS ILE GLY LEU PRO ALA ASP ILE LYS LEU VAL SEQRES 22 B 289 LYS MET SER TRP GLN THR LYS GLU TYR ASN VAL VAL ARG SEQRES 23 B 289 ASN ASN VAL HET MN A 402 1 HET UDP A 401 25 HET GOL A 404 6 HET MN B1402 1 HET UDP B1401 25 HET GOL B1404 6 HETNAM MN MANGANESE (II) ION HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MN 2(MN 2+) FORMUL 4 UDP 2(C9 H14 N2 O12 P2) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 9 HOH *747(H2 O) HELIX 1 1 LYS A 84 PHE A 89 1 6 HELIX 2 2 ASN A 90 ARG A 94 5 5 HELIX 3 3 ASN A 114 LYS A 126 1 13 HELIX 4 4 ARG A 138 PHE A 155 1 18 HELIX 5 5 ASP A 169 MET A 173 5 5 HELIX 6 6 ARG A 194 HIS A 213 1 20 HELIX 7 7 HIS A 213 VAL A 218 1 6 HELIX 8 8 GLY A 235 LEU A 239 5 5 HELIX 9 9 ASP A 254 PHE A 258 5 5 HELIX 10 10 THR A 287 ASN A 308 1 22 HELIX 11 11 TRP A 314 ASN A 327 1 14 HELIX 12 12 PRO A 335 CYS A 338 5 4 HELIX 13 13 ASP A 340 GLY A 344 5 5 HELIX 14 14 GLU A 360 ARG A 365 1 6 HELIX 15 15 LYS B 1084 PHE B 1089 1 6 HELIX 16 16 ASN B 1090 ARG B 1094 5 5 HELIX 17 17 ASN B 1114 LYS B 1126 1 13 HELIX 18 18 ARG B 1138 PHE B 1155 1 18 HELIX 19 19 ASP B 1169 MET B 1173 5 5 HELIX 20 20 ARG B 1194 HIS B 1213 1 20 HELIX 21 21 HIS B 1213 VAL B 1218 1 6 HELIX 22 22 GLY B 1235 LEU B 1239 5 5 HELIX 23 23 ASP B 1254 PHE B 1258 5 5 HELIX 24 24 THR B 1287 ASN B 1308 1 22 HELIX 25 25 TRP B 1314 ASN B 1327 1 14 HELIX 26 26 PRO B 1335 CYS B 1338 5 4 HELIX 27 27 ASP B 1340 GLY B 1344 5 5 HELIX 28 28 GLU B 1360 ARG B 1365 1 6 SHEET 1 A 8 VAL A 107 VAL A 108 0 SHEET 2 A 8 LYS A 331 LEU A 333 1 O ILE A 332 N VAL A 108 SHEET 3 A 8 SER A 242 LEU A 246 1 N ALA A 244 O LEU A 333 SHEET 4 A 8 TYR A 279 GLY A 286 -1 O GLY A 285 N VAL A 243 SHEET 5 A 8 PHE A 220 MET A 224 -1 N CYS A 223 O PHE A 284 SHEET 6 A 8 VAL A 129 ALA A 135 1 N GLY A 130 O PHE A 220 SHEET 7 A 8 VAL A 161 VAL A 167 1 O TYR A 164 N LEU A 131 SHEET 8 A 8 ARG A 182 LYS A 188 1 O PHE A 187 N ILE A 165 SHEET 1 B 2 GLN A 228 PHE A 230 0 SHEET 2 B 2 MET A 354 TRP A 356 -1 O SER A 355 N VAL A 229 SHEET 1 C 8 VAL B1107 VAL B1108 0 SHEET 2 C 8 LYS B1331 LEU B1333 1 O ILE B1332 N VAL B1108 SHEET 3 C 8 SER B1242 LEU B1246 1 N ALA B1244 O LEU B1333 SHEET 4 C 8 TYR B1279 GLY B1286 -1 O GLY B1285 N VAL B1243 SHEET 5 C 8 PHE B1220 MET B1224 -1 N CYS B1223 O PHE B1284 SHEET 6 C 8 VAL B1129 ALA B1135 1 N GLY B1130 O PHE B1220 SHEET 7 C 8 VAL B1161 VAL B1167 1 O TYR B1164 N LEU B1131 SHEET 8 C 8 ARG B1182 LYS B1188 1 O PHE B1187 N ILE B1165 SHEET 1 D 2 GLN B1228 PHE B1230 0 SHEET 2 D 2 MET B1354 TRP B1356 -1 O SER B1355 N VAL B1229 LINK OD2 ASP A 225 MN MN A 402 1555 1555 2.13 LINK OD1 ASP A 227 MN MN A 402 1555 1555 2.18 LINK OD2 ASP A 227 MN MN A 402 1555 1555 2.39 LINK O1A UDP A 401 MN MN A 402 1555 1555 2.24 LINK O1B UDP A 401 MN MN A 402 1555 1555 2.11 LINK MN MN A 402 O HOH A2750 1555 1555 2.16 LINK OD2 ASP B1225 MN MN B1402 1555 1555 2.10 LINK OD1 ASP B1227 MN MN B1402 1555 1555 2.17 LINK OD2 ASP B1227 MN MN B1402 1555 1555 2.43 LINK O1B UDP B1401 MN MN B1402 1555 1555 2.08 LINK O1A UDP B1401 MN MN B1402 1555 1555 2.21 LINK MN MN B1402 O HOH B2751 1555 1555 2.15 SITE 1 AC1 4 ASP A 225 ASP A 227 UDP A 401 HOH A2750 SITE 1 AC2 4 ASP B1225 ASP B1227 UDP B1401 HOH B2751 SITE 1 AC3 21 PHE A 134 ALA A 135 VAL A 136 TYR A 139 SITE 2 AC3 21 ILE A 198 SER A 199 ARG A 202 ASP A 225 SITE 3 AC3 21 VAL A 226 ASP A 227 LYS A 359 TYR A 361 SITE 4 AC3 21 ARG A 365 MN A 402 HOH A2001 HOH A2027 SITE 5 AC3 21 HOH A2087 HOH A2131 HOH A2157 HOH A2260 SITE 6 AC3 21 HOH A2750 SITE 1 AC4 21 PHE B1134 ALA B1135 VAL B1136 TYR B1139 SITE 2 AC4 21 ILE B1198 SER B1199 ARG B1202 ASP B1225 SITE 3 AC4 21 VAL B1226 ASP B1227 LYS B1359 TYR B1361 SITE 4 AC4 21 ARG B1365 MN B1402 HOH B2020 HOH B2043 SITE 5 AC4 21 HOH B2051 HOH B2100 HOH B2109 HOH B2119 SITE 6 AC4 21 HOH B2751 SITE 1 AC5 5 HIS A 142 GLU A 146 GLN A 357 GLU A 360 SITE 2 AC5 5 HOH A2562 SITE 1 AC6 5 HIS B1142 GLU B1146 GLN B1357 GLU B1360 SITE 2 AC6 5 HOH B2369 CRYST1 45.022 94.145 94.382 90.00 98.92 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022211 0.000000 0.003486 0.00000 SCALE2 0.000000 0.010622 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010725 0.00000