data_1K6H # _entry.id 1K6H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1K6H pdb_00001k6h 10.2210/pdb1k6h/pdb RCSB RCSB014620 ? ? WWPDB D_1000014620 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1K6G _pdbx_database_related.details 'AGNN Tetraloop' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1K6H _pdbx_database_status.recvd_initial_deposition_date 2001-10-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lebars, I.' 1 'Lamontagne, B.' 2 'Yoshizawa, S.' 3 'Abou Elela, S.' 4 'Fourmy, D.' 5 # _citation.id primary _citation.title 'Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.' _citation.journal_abbrev 'EMBO J.' _citation.journal_volume 20 _citation.page_first 7250 _citation.page_last 7258 _citation.year 2001 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11743001 _citation.pdbx_database_id_DOI 10.1093/emboj/20.24.7250 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lebars, I.' 1 ? primary 'Lamontagne, B.' 2 ? primary 'Yoshizawa, S.' 3 ? primary 'Aboul-Elela, S.' 4 ? primary 'Fourmy, D.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;RNA (5'-R(P*GP*GP*CP*GP*UP*GP*UP*UP*CP*AP*GP*AP*AP*GP*AP*AP*CP*GP*CP*GP*CP*C)-3') ; _entity.formula_weight 7112.306 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'AGNN Tetraloop, Substrate for Rnt1p' # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGCGUGUUCAGAAGAACGCGCC _entity_poly.pdbx_seq_one_letter_code_can GGCGUGUUCAGAAGAACGCGCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 G n 1 5 U n 1 6 G n 1 7 U n 1 8 U n 1 9 C n 1 10 A n 1 11 G n 1 12 A n 1 13 A n 1 14 G n 1 15 A n 1 16 A n 1 17 C n 1 18 G n 1 19 C n 1 20 G n 1 21 C n 1 22 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthetic-T7 RNA transcript' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1K6H _struct_ref.pdbx_db_accession 1K6H _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1K6H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1K6H _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 2 2 '2D NOESY' 3 1 1 '2D DQF-COSY' 4 2 1 '2D TOCSY' 5 3 1 '3D NOESY-HMQC' 6 3 1 '3D HCCH-TOCSY' 7 3 1 'HP COSY' 8 4 1 HSQC 9 4 2 HSQC 10 4 1 '3D HCP' 11 4 2 'HNN COSY' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 293 ambient 6.4 '10mM Na Phosphate' ? K 2 278 ambient 6.4 '10mM Na Phosphate' ? K 3 293 ambient 6.4 '10mM Na Phosphate' ? K 4 278 ambient 6.4 '10mM Na Phosphate' ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '1 mM RNA, 10 mM Na Phosphate, pH 6.4' '100% D2O' 2 '1 mM RNA, 10 mM Na Phosphate, pH 6.4' '95% H2O/5% D2O' 3 '1 mM RNA,15N, 13C, 10 mM Na Phosphate, pH 6.4' '100% D2O' 4 '1 mM RNA, 15N, 13C, 10 mM Na Phosphate, pH 6.4' '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DRX 800 2 ? Bruker DRX 600 # _pdbx_nmr_refine.entry_id 1K6H _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1K6H _pdbx_nmr_ensemble.conformers_calculated_total_number 25 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1K6H _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR ? collection ? 1 XwinNMR ? processing ? 2 AURELIA ? 'data analysis' ? 3 Discover ? 'structure solution' ? 4 Discover ? refinement ? 5 # _exptl.entry_id 1K6H _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1K6H _struct.title 'Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA processing' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1K6H _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA Tetraloop, RNA' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 22 N3 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 22 O2 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 22 N4 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 21 N3 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 21 O2 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 21 N4 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 20 N1 ? ? A C 3 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 20 O6 ? ? A C 3 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 20 N2 ? ? A C 3 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 19 N3 ? ? A G 4 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 19 O2 ? ? A G 4 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 19 N4 ? ? A G 4 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 5 N3 ? ? ? 1_555 A G 18 O6 ? ? A U 5 A G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? A U 5 O2 ? ? ? 1_555 A G 18 N1 ? ? A U 5 A G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? A G 6 O6 ? ? ? 1_555 A A 16 N6 ? ? A G 6 A A 16 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog16 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 17 N3 ? ? A G 6 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 17 O2 ? ? A G 6 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 17 N4 ? ? A G 6 A C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 16 N1 ? ? A U 7 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 16 N6 ? ? A U 7 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 15 N1 ? ? A U 8 A A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 15 N6 ? ? A U 8 A A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 14 N1 ? ? A C 9 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 14 O6 ? ? A C 9 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 14 N2 ? ? A C 9 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N3 ? ? ? 1_555 A A 13 N6 ? ? A A 10 A A 13 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1K6H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1K6H _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 2 G G1 A . n A 1 2 G 2 2 3 G G2 A . n A 1 3 C 3 3 4 C C3 A . n A 1 4 G 4 4 5 G G4 A . n A 1 5 U 5 5 6 U U5 A . n A 1 6 G 6 6 7 G G6 A . n A 1 7 U 7 7 8 U U7 A . n A 1 8 U 8 8 9 U U8 A . n A 1 9 C 9 9 10 C C9 A . n A 1 10 A 10 10 11 A A10 A . n A 1 11 G 11 11 12 G G11 A . n A 1 12 A 12 12 13 A A12 A . n A 1 13 A 13 13 14 A A13 A . n A 1 14 G 14 14 15 G G14 A . n A 1 15 A 15 15 16 A A15 A . n A 1 16 A 16 16 17 A A16 A . n A 1 17 C 17 17 18 C C17 A . n A 1 18 G 18 18 19 G G18 A . n A 1 19 C 19 19 20 C C19 A . n A 1 20 G 20 20 21 G G20 A . n A 1 21 C 21 21 22 C C21 A . n A 1 22 C 22 22 23 C C22 A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-12-19 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.98 108.50 4.48 0.70 N 2 1 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.86 108.50 4.36 0.70 N 3 1 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 112.84 108.50 4.34 0.70 N 4 1 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.24 108.50 4.74 0.70 N 5 1 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.04 108.50 4.54 0.70 N 6 1 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.08 108.50 4.58 0.70 N 7 2 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.31 108.50 4.81 0.70 N 8 2 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.96 108.50 4.46 0.70 N 9 2 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 112.78 108.50 4.28 0.70 N 10 2 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.29 108.50 4.79 0.70 N 11 2 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 113.05 108.50 4.55 0.70 N 12 2 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 113.70 108.50 5.20 0.70 N 13 2 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.26 108.50 4.76 0.70 N 14 2 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.15 108.50 4.65 0.70 N 15 2 "O4'" A C 22 ? ? "C1'" A C 22 ? ? N1 A C 22 ? ? 112.72 108.50 4.22 0.70 N 16 3 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.30 108.50 4.80 0.70 N 17 3 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 113.12 108.50 4.62 0.70 N 18 3 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 113.39 108.50 4.89 0.70 N 19 3 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 114.05 108.50 5.55 0.70 N 20 3 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.91 108.50 4.41 0.70 N 21 3 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.22 108.50 4.72 0.70 N 22 4 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.07 108.50 4.57 0.70 N 23 4 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 113.05 108.50 4.55 0.70 N 24 4 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 113.29 108.50 4.79 0.70 N 25 4 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.33 108.50 4.83 0.70 N 26 4 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 115.21 108.50 6.71 0.70 N 27 4 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 114.34 108.50 5.84 0.70 N 28 4 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.07 108.50 4.57 0.70 N 29 4 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.99 108.50 4.49 0.70 N 30 5 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.95 108.50 4.45 0.70 N 31 5 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.70 108.50 4.20 0.70 N 32 5 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 113.08 108.50 4.58 0.70 N 33 5 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 112.74 108.50 4.24 0.70 N 34 5 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.20 108.50 4.70 0.70 N 35 5 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.06 108.50 4.56 0.70 N 36 6 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.34 108.50 4.84 0.70 N 37 6 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.20 108.50 4.70 0.70 N 38 6 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 114.13 108.50 5.63 0.70 N 39 6 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 112.86 108.50 4.36 0.70 N 40 6 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.00 108.50 4.50 0.70 N 41 6 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.15 108.50 4.65 0.70 N 42 7 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.45 108.50 4.95 0.70 N 43 7 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 112.78 108.50 4.28 0.70 N 44 7 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.79 108.50 4.29 0.70 N 45 7 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.07 108.50 4.57 0.70 N 46 8 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.23 108.50 4.73 0.70 N 47 8 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.06 108.50 4.56 0.70 N 48 8 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.42 108.50 4.92 0.70 N 49 8 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 113.98 108.50 5.48 0.70 N 50 8 "C4'" A A 12 ? ? "C3'" A A 12 ? ? "C2'" A A 12 ? ? 96.40 102.60 -6.20 1.00 N 51 8 "O4'" A G 14 ? ? "C1'" A G 14 ? ? N9 A G 14 ? ? 113.33 108.50 4.83 0.70 N 52 8 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 112.86 108.50 4.36 0.70 N 53 8 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.04 108.50 4.54 0.70 N 54 8 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.00 108.50 4.50 0.70 N 55 9 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.19 108.50 4.69 0.70 N 56 9 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 114.00 108.50 5.50 0.70 N 57 9 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 112.98 108.50 4.48 0.70 N 58 9 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 112.86 108.50 4.36 0.70 N 59 9 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.34 108.50 4.84 0.70 N 60 9 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 113.48 108.50 4.98 0.70 N 61 9 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 112.90 108.50 4.40 0.70 N 62 9 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.15 108.50 4.65 0.70 N 63 9 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.38 108.50 4.88 0.70 N 64 10 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.35 108.50 4.85 0.70 N 65 10 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.73 108.50 4.23 0.70 N 66 10 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.17 108.50 4.67 0.70 N 67 10 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 113.46 108.50 4.96 0.70 N 68 10 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.82 108.50 4.32 0.70 N 69 10 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.28 108.50 4.78 0.70 N 70 10 "O4'" A C 22 ? ? "C1'" A C 22 ? ? N1 A C 22 ? ? 112.74 108.50 4.24 0.70 N 71 11 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.04 108.50 4.54 0.70 N 72 11 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.25 108.50 4.75 0.70 N 73 11 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 113.04 108.50 4.54 0.70 N 74 11 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 113.67 108.50 5.17 0.70 N 75 11 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 113.11 108.50 4.61 0.70 N 76 11 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.25 108.50 4.75 0.70 N 77 11 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.06 108.50 4.56 0.70 N 78 12 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.93 108.50 4.43 0.70 N 79 12 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.76 108.50 4.26 0.70 N 80 12 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.21 108.50 4.71 0.70 N 81 12 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 113.41 108.50 4.91 0.70 N 82 12 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.23 108.50 4.73 0.70 N 83 12 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.11 108.50 4.61 0.70 N 84 13 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.78 108.50 4.28 0.70 N 85 13 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.13 108.50 4.63 0.70 N 86 13 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 113.05 108.50 4.55 0.70 N 87 13 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 113.43 108.50 4.93 0.70 N 88 13 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.12 108.50 4.62 0.70 N 89 14 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.11 108.50 4.61 0.70 N 90 14 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.10 108.50 4.60 0.70 N 91 14 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.48 108.50 4.98 0.70 N 92 14 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 113.37 108.50 4.87 0.70 N 93 14 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 112.75 108.50 4.25 0.70 N 94 14 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.17 108.50 4.67 0.70 N 95 14 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.06 108.50 4.56 0.70 N 96 15 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.16 108.50 4.66 0.70 N 97 15 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.12 108.50 4.62 0.70 N 98 15 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.67 108.50 5.17 0.70 N 99 15 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 113.82 108.50 5.32 0.70 N 100 15 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 114.23 108.50 5.73 0.70 N 101 15 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 113.47 108.50 4.97 0.70 N 102 15 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.14 108.50 4.64 0.70 N 103 15 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.12 108.50 4.62 0.70 N 104 16 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.50 108.50 5.00 0.70 N 105 16 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.47 108.50 4.97 0.70 N 106 16 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 112.77 108.50 4.27 0.70 N 107 16 C2 A G 11 ? ? N3 A G 11 ? ? C4 A G 11 ? ? 114.96 111.90 3.06 0.50 N 108 16 N3 A G 11 ? ? C4 A G 11 ? ? C5 A G 11 ? ? 125.49 128.60 -3.11 0.50 N 109 16 C8 A G 11 ? ? N9 A G 11 ? ? C4 A G 11 ? ? 103.92 106.40 -2.48 0.40 N 110 16 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 113.31 108.50 4.81 0.70 N 111 16 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 112.90 108.50 4.40 0.70 N 112 16 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.91 108.50 4.41 0.70 N 113 16 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.21 108.50 4.71 0.70 N 114 17 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.66 108.50 5.16 0.70 N 115 17 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 112.94 108.50 4.44 0.70 N 116 17 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 113.07 108.50 4.57 0.70 N 117 17 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.17 108.50 4.67 0.70 N 118 17 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 113.82 108.50 5.32 0.70 N 119 17 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 113.35 108.50 4.85 0.70 N 120 17 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 113.88 108.50 5.38 0.70 N 121 17 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.00 108.50 4.50 0.70 N 122 17 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.23 108.50 4.73 0.70 N 123 18 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.76 108.50 4.26 0.70 N 124 18 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.91 108.50 4.41 0.70 N 125 18 "O4'" A U 8 ? ? "C1'" A U 8 ? ? N1 A U 8 ? ? 112.97 108.50 4.47 0.70 N 126 18 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.06 108.50 4.56 0.70 N 127 18 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 113.97 108.50 5.47 0.70 N 128 18 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 113.23 108.50 4.73 0.70 N 129 18 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.61 108.50 5.11 0.70 N 130 18 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.01 108.50 4.51 0.70 N 131 19 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.83 108.50 4.33 0.70 N 132 19 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 113.33 108.50 4.83 0.70 N 133 19 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 112.86 108.50 4.36 0.70 N 134 19 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 114.45 108.50 5.95 0.70 N 135 19 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.73 108.50 4.23 0.70 N 136 19 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.20 108.50 4.70 0.70 N 137 20 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.99 108.50 4.49 0.70 N 138 20 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 113.34 108.50 4.84 0.70 N 139 20 "O4'" A G 11 ? ? "C1'" A G 11 ? ? N9 A G 11 ? ? 113.93 108.50 5.43 0.70 N 140 20 "O4'" A C 17 ? ? "C1'" A C 17 ? ? N1 A C 17 ? ? 112.80 108.50 4.30 0.70 N 141 20 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.32 108.50 4.82 0.70 N 142 20 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.09 108.50 4.59 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G A 6 ? ? 0.098 'SIDE CHAIN' 2 1 U A 8 ? ? 0.070 'SIDE CHAIN' 3 1 A A 10 ? ? 0.067 'SIDE CHAIN' 4 1 G A 18 ? ? 0.074 'SIDE CHAIN' 5 1 G A 20 ? ? 0.077 'SIDE CHAIN' 6 2 G A 6 ? ? 0.082 'SIDE CHAIN' 7 2 G A 11 ? ? 0.101 'SIDE CHAIN' 8 2 G A 20 ? ? 0.065 'SIDE CHAIN' 9 3 A A 10 ? ? 0.065 'SIDE CHAIN' 10 4 G A 4 ? ? 0.054 'SIDE CHAIN' 11 4 G A 11 ? ? 0.093 'SIDE CHAIN' 12 4 A A 12 ? ? 0.075 'SIDE CHAIN' 13 4 A A 16 ? ? 0.058 'SIDE CHAIN' 14 4 G A 20 ? ? 0.080 'SIDE CHAIN' 15 4 C A 21 ? ? 0.065 'SIDE CHAIN' 16 5 G A 6 ? ? 0.064 'SIDE CHAIN' 17 5 G A 11 ? ? 0.059 'SIDE CHAIN' 18 5 G A 20 ? ? 0.077 'SIDE CHAIN' 19 6 G A 6 ? ? 0.079 'SIDE CHAIN' 20 6 G A 11 ? ? 0.065 'SIDE CHAIN' 21 6 G A 18 ? ? 0.073 'SIDE CHAIN' 22 7 G A 4 ? ? 0.065 'SIDE CHAIN' 23 7 G A 6 ? ? 0.073 'SIDE CHAIN' 24 7 G A 11 ? ? 0.056 'SIDE CHAIN' 25 7 G A 18 ? ? 0.077 'SIDE CHAIN' 26 8 G A 6 ? ? 0.085 'SIDE CHAIN' 27 8 G A 11 ? ? 0.085 'SIDE CHAIN' 28 8 A A 13 ? ? 0.070 'SIDE CHAIN' 29 8 G A 14 ? ? 0.094 'SIDE CHAIN' 30 8 G A 18 ? ? 0.073 'SIDE CHAIN' 31 9 G A 11 ? ? 0.070 'SIDE CHAIN' 32 9 G A 14 ? ? 0.062 'SIDE CHAIN' 33 10 G A 4 ? ? 0.056 'SIDE CHAIN' 34 10 G A 11 ? ? 0.069 'SIDE CHAIN' 35 10 C A 21 ? ? 0.061 'SIDE CHAIN' 36 11 G A 6 ? ? 0.092 'SIDE CHAIN' 37 11 G A 20 ? ? 0.075 'SIDE CHAIN' 38 12 G A 6 ? ? 0.073 'SIDE CHAIN' 39 12 G A 11 ? ? 0.072 'SIDE CHAIN' 40 12 G A 20 ? ? 0.069 'SIDE CHAIN' 41 13 G A 6 ? ? 0.077 'SIDE CHAIN' 42 13 G A 11 ? ? 0.066 'SIDE CHAIN' 43 13 A A 16 ? ? 0.054 'SIDE CHAIN' 44 13 G A 20 ? ? 0.088 'SIDE CHAIN' 45 14 G A 6 ? ? 0.088 'SIDE CHAIN' 46 14 G A 11 ? ? 0.082 'SIDE CHAIN' 47 14 G A 18 ? ? 0.061 'SIDE CHAIN' 48 14 C A 21 ? ? 0.065 'SIDE CHAIN' 49 15 G A 6 ? ? 0.069 'SIDE CHAIN' 50 15 A A 12 ? ? 0.073 'SIDE CHAIN' 51 15 G A 20 ? ? 0.068 'SIDE CHAIN' 52 15 C A 21 ? ? 0.061 'SIDE CHAIN' 53 16 G A 4 ? ? 0.058 'SIDE CHAIN' 54 16 G A 6 ? ? 0.064 'SIDE CHAIN' 55 16 G A 11 ? ? 0.110 'SIDE CHAIN' 56 16 G A 14 ? ? 0.070 'SIDE CHAIN' 57 16 G A 18 ? ? 0.061 'SIDE CHAIN' 58 17 A A 10 ? ? 0.052 'SIDE CHAIN' 59 17 A A 16 ? ? 0.076 'SIDE CHAIN' 60 17 C A 21 ? ? 0.063 'SIDE CHAIN' 61 18 A A 10 ? ? 0.056 'SIDE CHAIN' 62 18 G A 11 ? ? 0.057 'SIDE CHAIN' 63 18 G A 14 ? ? 0.066 'SIDE CHAIN' 64 18 A A 15 ? ? 0.056 'SIDE CHAIN' 65 18 G A 20 ? ? 0.061 'SIDE CHAIN' 66 18 C A 21 ? ? 0.063 'SIDE CHAIN' 67 19 A A 10 ? ? 0.051 'SIDE CHAIN' 68 19 G A 11 ? ? 0.071 'SIDE CHAIN' 69 19 A A 12 ? ? 0.057 'SIDE CHAIN' 70 19 G A 18 ? ? 0.063 'SIDE CHAIN' 71 19 G A 20 ? ? 0.073 'SIDE CHAIN' 72 20 G A 6 ? ? 0.085 'SIDE CHAIN' 73 20 G A 11 ? ? 0.063 'SIDE CHAIN' 74 20 G A 20 ? ? 0.080 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1K6H 'a-form double helix' 1K6H 'hairpin loop' 1K6H 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 22 1_555 0.229 0.021 0.286 0.698 -10.963 -3.519 1 A_G1:C22_A A 1 ? A 22 ? 19 1 1 A G 2 1_555 A C 21 1_555 -0.777 -0.215 0.024 -2.119 -24.207 -0.050 2 A_G2:C21_A A 2 ? A 21 ? 19 1 1 A C 3 1_555 A G 20 1_555 0.676 -0.185 0.123 -2.761 -22.537 -0.976 3 A_C3:G20_A A 3 ? A 20 ? 19 1 1 A G 4 1_555 A C 19 1_555 0.299 -0.022 0.385 -10.564 -23.374 -3.000 4 A_G4:C19_A A 4 ? A 19 ? 19 1 1 A U 5 1_555 A G 18 1_555 1.526 -0.473 0.810 -7.613 -19.993 -2.199 5 A_U5:G18_A A 5 ? A 18 ? 28 1 1 A G 6 1_555 A C 17 1_555 -0.639 -0.283 0.922 14.310 -19.543 -4.002 6 A_G6:C17_A A 6 ? A 17 ? 19 1 1 A U 7 1_555 A A 16 1_555 -0.121 0.028 0.345 16.070 -22.206 -5.433 7 A_U7:A16_A A 7 ? A 16 ? 20 1 1 A U 8 1_555 A A 15 1_555 -0.136 0.101 -0.578 17.321 -30.844 -4.071 8 A_U8:A15_A A 8 ? A 15 ? 20 1 1 A C 9 1_555 A G 14 1_555 -0.632 -0.002 0.456 -9.201 3.923 -2.978 9 A_C9:G14_A A 9 ? A 14 ? 19 1 1 A A 10 1_555 A A 13 1_555 6.500 -1.641 1.315 -7.390 -8.923 32.836 10 A_A10:A13_A A 10 ? A 13 ? ? 5 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 22 1_555 A G 2 1_555 A C 21 1_555 0.137 -1.726 3.065 1.348 11.972 28.950 -5.094 -0.041 2.199 22.745 -2.560 31.307 1 AA_G1G2:C21C22_AA A 1 ? A 22 ? A 2 ? A 21 ? 1 A G 2 1_555 A C 21 1_555 A C 3 1_555 A G 20 1_555 0.068 -1.331 3.097 0.325 3.522 40.105 -2.304 -0.064 2.975 5.123 -0.473 40.254 2 AA_G2C3:G20C21_AA A 2 ? A 21 ? A 3 ? A 20 ? 1 A C 3 1_555 A G 20 1_555 A G 4 1_555 A C 19 1_555 0.031 -1.576 3.032 1.225 17.352 32.039 -4.498 0.089 1.951 28.930 -2.043 36.348 3 AA_C3G4:C19G20_AA A 3 ? A 20 ? A 4 ? A 19 ? 1 A G 4 1_555 A C 19 1_555 A U 5 1_555 A G 18 1_555 0.044 -1.305 3.045 -0.856 1.702 38.102 -2.194 -0.167 2.985 2.605 1.311 38.148 4 AA_G4U5:G18C19_AA A 4 ? A 19 ? A 5 ? A 18 ? 1 A U 5 1_555 A G 18 1_555 A G 6 1_555 A C 17 1_555 -0.376 -1.665 2.045 -2.079 12.054 24.748 -5.015 0.527 1.151 26.180 4.515 27.564 5 AA_U5G6:C17G18_AA A 5 ? A 18 ? A 6 ? A 17 ? 1 A G 6 1_555 A C 17 1_555 A U 7 1_555 A A 16 1_555 0.048 -1.518 3.054 1.352 2.049 36.108 -2.709 0.098 2.966 3.300 -2.178 36.189 6 AA_G6U7:A16C17_AA A 6 ? A 17 ? A 7 ? A 16 ? 1 A U 7 1_555 A A 16 1_555 A U 8 1_555 A A 15 1_555 -0.057 -1.699 2.993 3.442 8.740 31.735 -4.239 0.593 2.432 15.562 -6.128 33.062 7 AA_U7U8:A15A16_AA A 7 ? A 16 ? A 8 ? A 15 ? 1 A U 8 1_555 A A 15 1_555 A C 9 1_555 A G 14 1_555 -0.568 -2.213 3.713 -12.165 26.078 33.865 -5.293 -0.342 1.760 37.495 17.490 44.165 8 AA_U8C9:G14A15_AA A 8 ? A 15 ? A 9 ? A 14 ? 1 A C 9 1_555 A G 14 1_555 A A 10 1_555 A A 13 1_555 0.421 -0.526 3.061 5.052 19.836 43.035 -2.126 -0.148 2.624 25.399 -6.468 47.446 9 AA_C9A10:A13G14_AA A 9 ? A 14 ? A 10 ? A 13 ? #