data_1K79 # _entry.id 1K79 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1K79 pdb_00001k79 10.2210/pdb1k79/pdb NDB PD0260 ? ? RCSB RCSB014648 ? ? WWPDB D_1000014648 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-01-04 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1K79 _pdbx_database_status.recvd_initial_deposition_date 2001-10-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1K78 'Pax5(1-149)+Ets-1(331-440)+DNA' unspecified PDB 1K7A 'Ets-1(331-440)+GGAG duplex' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Garvie, C.W.' 1 'Hagman, J.' 2 'Wolberger, C.' 3 # _citation.id primary _citation.title 'Structural studies of Ets-1/Pax5 complex formation on DNA.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 8 _citation.page_first 1267 _citation.page_last 1276 _citation.year 2001 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11779502 _citation.pdbx_database_id_DOI '10.1016/S1097-2765(01)00410-5' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Garvie, C.W.' 1 ? primary 'Hagman, J.' 2 ? primary 'Wolberger, C.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*AP*GP*TP*GP*CP*CP*GP*GP*AP*AP*AP*TP*GP*T)-3') ; 4649.033 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*AP*CP*AP*TP*TP*TP*CP*CP*GP*GP*CP*AP*CP*T)-3') ; 4504.936 2 ? ? ? ? 3 polymer man 'C-ets-1 protein' 12985.833 2 ? ? 'ETS domain' ? 4 water nat water 18.015 96 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DA)(DG)(DT)(DG)(DC)(DC)(DG)(DG)(DA)(DA)(DA)(DT)(DG)(DT)' TAGTGCCGGAAATGT B,E ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DC)(DA)(DT)(DT)(DT)(DC)(DC)(DG)(DG)(DC)(DA)(DC)(DT)' CACATTTCCGGCACT C,F ? 3 'polypeptide(L)' no no ;GSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRY VYRFVCDLQSLLGYTPEELHAMLDVKPDAD ; ;GSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRY VYRFVCDLQSLLGYTPEELHAMLDVKPDAD ; A,D ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DG n 1 4 DT n 1 5 DG n 1 6 DC n 1 7 DC n 1 8 DG n 1 9 DG n 1 10 DA n 1 11 DA n 1 12 DA n 1 13 DT n 1 14 DG n 1 15 DT n 2 1 DC n 2 2 DA n 2 3 DC n 2 4 DA n 2 5 DT n 2 6 DT n 2 7 DT n 2 8 DC n 2 9 DC n 2 10 DG n 2 11 DG n 2 12 DC n 2 13 DA n 2 14 DC n 2 15 DT n 3 1 GLY n 3 2 SER n 3 3 GLY n 3 4 PRO n 3 5 ILE n 3 6 GLN n 3 7 LEU n 3 8 TRP n 3 9 GLN n 3 10 PHE n 3 11 LEU n 3 12 LEU n 3 13 GLU n 3 14 LEU n 3 15 LEU n 3 16 THR n 3 17 ASP n 3 18 LYS n 3 19 SER n 3 20 CYS n 3 21 GLN n 3 22 SER n 3 23 PHE n 3 24 ILE n 3 25 SER n 3 26 TRP n 3 27 THR n 3 28 GLY n 3 29 ASP n 3 30 GLY n 3 31 TRP n 3 32 GLU n 3 33 PHE n 3 34 LYS n 3 35 LEU n 3 36 SER n 3 37 ASP n 3 38 PRO n 3 39 ASP n 3 40 GLU n 3 41 VAL n 3 42 ALA n 3 43 ARG n 3 44 ARG n 3 45 TRP n 3 46 GLY n 3 47 LYS n 3 48 ARG n 3 49 LYS n 3 50 ASN n 3 51 LYS n 3 52 PRO n 3 53 LYS n 3 54 MET n 3 55 ASN n 3 56 TYR n 3 57 GLU n 3 58 LYS n 3 59 LEU n 3 60 SER n 3 61 ARG n 3 62 GLY n 3 63 LEU n 3 64 ARG n 3 65 TYR n 3 66 TYR n 3 67 TYR n 3 68 ASP n 3 69 LYS n 3 70 ASN n 3 71 ILE n 3 72 ILE n 3 73 HIS n 3 74 LYS n 3 75 THR n 3 76 ALA n 3 77 GLY n 3 78 LYS n 3 79 ARG n 3 80 TYR n 3 81 VAL n 3 82 TYR n 3 83 ARG n 3 84 PHE n 3 85 VAL n 3 86 CYS n 3 87 ASP n 3 88 LEU n 3 89 GLN n 3 90 SER n 3 91 LEU n 3 92 LEU n 3 93 GLY n 3 94 TYR n 3 95 THR n 3 96 PRO n 3 97 GLU n 3 98 GLU n 3 99 LEU n 3 100 HIS n 3 101 ALA n 3 102 MET n 3 103 LEU n 3 104 ASP n 3 105 VAL n 3 106 LYS n 3 107 PRO n 3 108 ASP n 3 109 ALA n 3 110 ASP n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Ets-1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET11A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T B . n A 1 2 DA 2 2 2 DA A B . n A 1 3 DG 3 3 3 DG G B . n A 1 4 DT 4 4 4 DT T B . n A 1 5 DG 5 5 5 DG G B . n A 1 6 DC 6 6 6 DC C B . n A 1 7 DC 7 7 7 DC C B . n A 1 8 DG 8 8 8 DG G B . n A 1 9 DG 9 9 9 DG G B . n A 1 10 DA 10 10 10 DA A B . n A 1 11 DA 11 11 11 DA A B . n A 1 12 DA 12 12 12 DA A B . n A 1 13 DT 13 13 13 DT T B . n A 1 14 DG 14 14 14 DG G B . n A 1 15 DT 15 15 15 DT T B . n B 2 1 DC 1 1 1 DC C C . n B 2 2 DA 2 2 2 DA A C . n B 2 3 DC 3 3 3 DC C C . n B 2 4 DA 4 4 4 DA A C . n B 2 5 DT 5 5 5 DT T C . n B 2 6 DT 6 6 6 DT T C . n B 2 7 DT 7 7 7 DT T C . n B 2 8 DC 8 8 8 DC C C . n B 2 9 DC 9 9 9 DC C C . n B 2 10 DG 10 10 10 DG G C . n B 2 11 DG 11 11 11 DG G C . n B 2 12 DC 12 12 12 DC C C . n B 2 13 DA 13 13 13 DA A C . n B 2 14 DC 14 14 14 DC C C . n B 2 15 DT 15 15 15 DT T C . n C 1 1 DT 1 1 1 DT T E . n C 1 2 DA 2 2 2 DA A E . n C 1 3 DG 3 3 3 DG G E . n C 1 4 DT 4 4 4 DT T E . n C 1 5 DG 5 5 5 DG G E . n C 1 6 DC 6 6 6 DC C E . n C 1 7 DC 7 7 7 DC C E . n C 1 8 DG 8 8 8 DG G E . n C 1 9 DG 9 9 9 DG G E . n C 1 10 DA 10 10 10 DA A E . n C 1 11 DA 11 11 11 DA A E . n C 1 12 DA 12 12 12 DA A E . n C 1 13 DT 13 13 13 DT T E . n C 1 14 DG 14 14 14 DG G E . n C 1 15 DT 15 15 15 DT T E . n D 2 1 DC 1 1 1 DC C F . n D 2 2 DA 2 2 2 DA A F . n D 2 3 DC 3 3 3 DC C F . n D 2 4 DA 4 4 4 DA A F . n D 2 5 DT 5 5 5 DT T F . n D 2 6 DT 6 6 6 DT T F . n D 2 7 DT 7 7 7 DT T F . n D 2 8 DC 8 8 8 DC C F . n D 2 9 DC 9 9 9 DC C F . n D 2 10 DG 10 10 10 DG G F . n D 2 11 DG 11 11 11 DG G F . n D 2 12 DC 12 12 12 DC C F . n D 2 13 DA 13 13 13 DA A F . n D 2 14 DC 14 14 14 DC C F . n D 2 15 DT 15 15 15 DT T F . n E 3 1 GLY 1 331 ? ? ? A . n E 3 2 SER 2 332 ? ? ? A . n E 3 3 GLY 3 333 333 GLY ALA A . n E 3 4 PRO 4 334 334 PRO PRO A . n E 3 5 ILE 5 335 335 ILE ILE A . n E 3 6 GLN 6 336 336 GLN GLN A . n E 3 7 LEU 7 337 337 LEU LEU A . n E 3 8 TRP 8 338 338 TRP TRP A . n E 3 9 GLN 9 339 339 GLN GLN A . n E 3 10 PHE 10 340 340 PHE PHE A . n E 3 11 LEU 11 341 341 LEU LEU A . n E 3 12 LEU 12 342 342 LEU LEU A . n E 3 13 GLU 13 343 343 GLU GLU A . n E 3 14 LEU 14 344 344 LEU LEU A . n E 3 15 LEU 15 345 345 LEU LEU A . n E 3 16 THR 16 346 346 THR THR A . n E 3 17 ASP 17 347 347 ASP ASP A . n E 3 18 LYS 18 348 348 LYS LYS A . n E 3 19 SER 19 349 349 SER SER A . n E 3 20 CYS 20 350 350 CYS CYS A . n E 3 21 GLN 21 351 351 GLN GLN A . n E 3 22 SER 22 352 352 SER SER A . n E 3 23 PHE 23 353 353 PHE PHE A . n E 3 24 ILE 24 354 354 ILE ILE A . n E 3 25 SER 25 355 355 SER SER A . n E 3 26 TRP 26 356 356 TRP TRP A . n E 3 27 THR 27 357 357 THR THR A . n E 3 28 GLY 28 358 358 GLY GLY A . n E 3 29 ASP 29 359 359 ASP ASP A . n E 3 30 GLY 30 360 360 GLY GLY A . n E 3 31 TRP 31 361 361 TRP TRP A . n E 3 32 GLU 32 362 362 GLU GLU A . n E 3 33 PHE 33 363 363 PHE PHE A . n E 3 34 LYS 34 364 364 LYS LYS A . n E 3 35 LEU 35 365 365 LEU LEU A . n E 3 36 SER 36 366 366 SER SER A . n E 3 37 ASP 37 367 367 ASP ASP A . n E 3 38 PRO 38 368 368 PRO PRO A . n E 3 39 ASP 39 369 369 ASP ASP A . n E 3 40 GLU 40 370 370 GLU GLU A . n E 3 41 VAL 41 371 371 VAL VAL A . n E 3 42 ALA 42 372 372 ALA ALA A . n E 3 43 ARG 43 373 373 ARG ARG A . n E 3 44 ARG 44 374 374 ARG ARG A . n E 3 45 TRP 45 375 375 TRP TRP A . n E 3 46 GLY 46 376 376 GLY GLY A . n E 3 47 LYS 47 377 377 LYS LYS A . n E 3 48 ARG 48 378 378 ARG ARG A . n E 3 49 LYS 49 379 379 LYS LYS A . n E 3 50 ASN 50 380 380 ASN ASN A . n E 3 51 LYS 51 381 381 LYS LYS A . n E 3 52 PRO 52 382 382 PRO PRO A . n E 3 53 LYS 53 383 383 LYS LYS A . n E 3 54 MET 54 384 384 MET MET A . n E 3 55 ASN 55 385 385 ASN ASN A . n E 3 56 TYR 56 386 386 TYR TYR A . n E 3 57 GLU 57 387 387 GLU GLU A . n E 3 58 LYS 58 388 388 LYS LYS A . n E 3 59 LEU 59 389 389 LEU LEU A . n E 3 60 SER 60 390 390 SER SER A . n E 3 61 ARG 61 391 391 ARG ARG A . n E 3 62 GLY 62 392 392 GLY GLY A . n E 3 63 LEU 63 393 393 LEU LEU A . n E 3 64 ARG 64 394 394 ARG ARG A . n E 3 65 TYR 65 395 395 TYR TYR A . n E 3 66 TYR 66 396 396 TYR TYR A . n E 3 67 TYR 67 397 397 TYR TYR A . n E 3 68 ASP 68 398 398 ASP ASP A . n E 3 69 LYS 69 399 399 LYS LYS A . n E 3 70 ASN 70 400 400 ASN ASN A . n E 3 71 ILE 71 401 401 ILE ILE A . n E 3 72 ILE 72 402 402 ILE ILE A . n E 3 73 HIS 73 403 403 HIS HIS A . n E 3 74 LYS 74 404 404 LYS LYS A . n E 3 75 THR 75 405 405 THR THR A . n E 3 76 ALA 76 406 406 ALA ALA A . n E 3 77 GLY 77 407 407 GLY GLY A . n E 3 78 LYS 78 408 408 LYS LYS A . n E 3 79 ARG 79 409 409 ARG ARG A . n E 3 80 TYR 80 410 410 TYR TYR A . n E 3 81 VAL 81 411 411 VAL VAL A . n E 3 82 TYR 82 412 412 TYR TYR A . n E 3 83 ARG 83 413 413 ARG ARG A . n E 3 84 PHE 84 414 414 PHE PHE A . n E 3 85 VAL 85 415 415 VAL VAL A . n E 3 86 CYS 86 416 416 CYS CYS A . n E 3 87 ASP 87 417 417 ASP ASP A . n E 3 88 LEU 88 418 418 LEU LEU A . n E 3 89 GLN 89 419 419 GLN GLN A . n E 3 90 SER 90 420 420 SER SER A . n E 3 91 LEU 91 421 421 LEU LEU A . n E 3 92 LEU 92 422 422 LEU LEU A . n E 3 93 GLY 93 423 423 GLY GLY A . n E 3 94 TYR 94 424 424 TYR TYR A . n E 3 95 THR 95 425 425 THR THR A . n E 3 96 PRO 96 426 426 PRO PRO A . n E 3 97 GLU 97 427 427 GLU GLU A . n E 3 98 GLU 98 428 428 GLU GLU A . n E 3 99 LEU 99 429 429 LEU LEU A . n E 3 100 HIS 100 430 430 HIS HIS A . n E 3 101 ALA 101 431 431 ALA ALA A . n E 3 102 MET 102 432 432 MET MET A . n E 3 103 LEU 103 433 433 LEU LEU A . n E 3 104 ASP 104 434 434 ASP ASP A . n E 3 105 VAL 105 435 435 VAL VAL A . n E 3 106 LYS 106 436 436 LYS ALA A . n E 3 107 PRO 107 437 ? ? ? A . n E 3 108 ASP 108 438 ? ? ? A . n E 3 109 ALA 109 439 ? ? ? A . n E 3 110 ASP 110 440 ? ? ? A . n F 3 1 GLY 1 331 ? ? ? D . n F 3 2 SER 2 332 ? ? ? D . n F 3 3 GLY 3 333 333 GLY ALA D . n F 3 4 PRO 4 334 334 PRO PRO D . n F 3 5 ILE 5 335 335 ILE ILE D . n F 3 6 GLN 6 336 336 GLN GLN D . n F 3 7 LEU 7 337 337 LEU LEU D . n F 3 8 TRP 8 338 338 TRP TRP D . n F 3 9 GLN 9 339 339 GLN GLN D . n F 3 10 PHE 10 340 340 PHE PHE D . n F 3 11 LEU 11 341 341 LEU LEU D . n F 3 12 LEU 12 342 342 LEU LEU D . n F 3 13 GLU 13 343 343 GLU GLU D . n F 3 14 LEU 14 344 344 LEU LEU D . n F 3 15 LEU 15 345 345 LEU LEU D . n F 3 16 THR 16 346 346 THR THR D . n F 3 17 ASP 17 347 347 ASP ASP D . n F 3 18 LYS 18 348 348 LYS LYS D . n F 3 19 SER 19 349 349 SER SER D . n F 3 20 CYS 20 350 350 CYS CYS D . n F 3 21 GLN 21 351 351 GLN GLN D . n F 3 22 SER 22 352 352 SER SER D . n F 3 23 PHE 23 353 353 PHE PHE D . n F 3 24 ILE 24 354 354 ILE ILE D . n F 3 25 SER 25 355 355 SER SER D . n F 3 26 TRP 26 356 356 TRP TRP D . n F 3 27 THR 27 357 357 THR THR D . n F 3 28 GLY 28 358 358 GLY GLY D . n F 3 29 ASP 29 359 359 ASP ASP D . n F 3 30 GLY 30 360 360 GLY GLY D . n F 3 31 TRP 31 361 361 TRP TRP D . n F 3 32 GLU 32 362 362 GLU GLU D . n F 3 33 PHE 33 363 363 PHE PHE D . n F 3 34 LYS 34 364 364 LYS LYS D . n F 3 35 LEU 35 365 365 LEU LEU D . n F 3 36 SER 36 366 366 SER SER D . n F 3 37 ASP 37 367 367 ASP ASP D . n F 3 38 PRO 38 368 368 PRO PRO D . n F 3 39 ASP 39 369 369 ASP ASP D . n F 3 40 GLU 40 370 370 GLU GLU D . n F 3 41 VAL 41 371 371 VAL VAL D . n F 3 42 ALA 42 372 372 ALA ALA D . n F 3 43 ARG 43 373 373 ARG ARG D . n F 3 44 ARG 44 374 374 ARG ARG D . n F 3 45 TRP 45 375 375 TRP TRP D . n F 3 46 GLY 46 376 376 GLY GLY D . n F 3 47 LYS 47 377 377 LYS LYS D . n F 3 48 ARG 48 378 378 ARG ARG D . n F 3 49 LYS 49 379 379 LYS LYS D . n F 3 50 ASN 50 380 380 ASN ASN D . n F 3 51 LYS 51 381 381 LYS LYS D . n F 3 52 PRO 52 382 382 PRO PRO D . n F 3 53 LYS 53 383 383 LYS LYS D . n F 3 54 MET 54 384 384 MET MET D . n F 3 55 ASN 55 385 385 ASN ASN D . n F 3 56 TYR 56 386 386 TYR TYR D . n F 3 57 GLU 57 387 387 GLU GLU D . n F 3 58 LYS 58 388 388 LYS LYS D . n F 3 59 LEU 59 389 389 LEU LEU D . n F 3 60 SER 60 390 390 SER SER D . n F 3 61 ARG 61 391 391 ARG ARG D . n F 3 62 GLY 62 392 392 GLY GLY D . n F 3 63 LEU 63 393 393 LEU LEU D . n F 3 64 ARG 64 394 394 ARG ARG D . n F 3 65 TYR 65 395 395 TYR TYR D . n F 3 66 TYR 66 396 396 TYR TYR D . n F 3 67 TYR 67 397 397 TYR TYR D . n F 3 68 ASP 68 398 398 ASP ASP D . n F 3 69 LYS 69 399 399 LYS LYS D . n F 3 70 ASN 70 400 400 ASN ASN D . n F 3 71 ILE 71 401 401 ILE ILE D . n F 3 72 ILE 72 402 402 ILE ILE D . n F 3 73 HIS 73 403 403 HIS HIS D . n F 3 74 LYS 74 404 404 LYS LYS D . n F 3 75 THR 75 405 405 THR THR D . n F 3 76 ALA 76 406 406 ALA ALA D . n F 3 77 GLY 77 407 407 GLY GLY D . n F 3 78 LYS 78 408 408 LYS LYS D . n F 3 79 ARG 79 409 409 ARG ARG D . n F 3 80 TYR 80 410 410 TYR TYR D . n F 3 81 VAL 81 411 411 VAL VAL D . n F 3 82 TYR 82 412 412 TYR TYR D . n F 3 83 ARG 83 413 413 ARG ARG D . n F 3 84 PHE 84 414 414 PHE PHE D . n F 3 85 VAL 85 415 415 VAL VAL D . n F 3 86 CYS 86 416 416 CYS CYS D . n F 3 87 ASP 87 417 417 ASP ASP D . n F 3 88 LEU 88 418 418 LEU LEU D . n F 3 89 GLN 89 419 419 GLN GLN D . n F 3 90 SER 90 420 420 SER SER D . n F 3 91 LEU 91 421 421 LEU LEU D . n F 3 92 LEU 92 422 422 LEU LEU D . n F 3 93 GLY 93 423 423 GLY GLY D . n F 3 94 TYR 94 424 424 TYR TYR D . n F 3 95 THR 95 425 425 THR THR D . n F 3 96 PRO 96 426 426 PRO PRO D . n F 3 97 GLU 97 427 427 GLU GLU D . n F 3 98 GLU 98 428 428 GLU GLU D . n F 3 99 LEU 99 429 429 LEU LEU D . n F 3 100 HIS 100 430 430 HIS HIS D . n F 3 101 ALA 101 431 431 ALA ALA D . n F 3 102 MET 102 432 432 MET MET D . n F 3 103 LEU 103 433 433 LEU LEU D . n F 3 104 ASP 104 434 434 ASP ASP D . n F 3 105 VAL 105 435 435 VAL VAL D . n F 3 106 LYS 106 436 436 LYS ALA D . n F 3 107 PRO 107 437 ? ? ? D . n F 3 108 ASP 108 438 ? ? ? D . n F 3 109 ALA 109 439 ? ? ? D . n F 3 110 ASP 110 440 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 HOH 1 16 10 HOH HOH B . G 4 HOH 2 17 12 HOH HOH B . G 4 HOH 3 18 16 HOH HOH B . G 4 HOH 4 19 63 HOH HOH B . G 4 HOH 5 20 83 HOH HOH B . G 4 HOH 6 21 88 HOH HOH B . G 4 HOH 7 22 89 HOH HOH B . H 4 HOH 1 16 1 HOH HOH C . H 4 HOH 2 17 4 HOH HOH C . H 4 HOH 3 18 30 HOH HOH C . H 4 HOH 4 19 32 HOH HOH C . H 4 HOH 5 20 37 HOH HOH C . H 4 HOH 6 21 57 HOH HOH C . H 4 HOH 7 22 59 HOH HOH C . H 4 HOH 8 23 60 HOH HOH C . I 4 HOH 1 23 23 HOH HOH E . I 4 HOH 2 29 29 HOH HOH E . I 4 HOH 3 39 39 HOH HOH E . I 4 HOH 4 41 41 HOH HOH E . I 4 HOH 5 52 52 HOH HOH E . I 4 HOH 6 62 62 HOH HOH E . I 4 HOH 7 65 65 HOH HOH E . I 4 HOH 8 80 80 HOH HOH E . J 4 HOH 1 16 6 HOH HOH F . J 4 HOH 2 17 27 HOH HOH F . J 4 HOH 3 18 33 HOH HOH F . J 4 HOH 4 19 35 HOH HOH F . J 4 HOH 5 20 55 HOH HOH F . J 4 HOH 6 21 61 HOH HOH F . K 4 HOH 1 2 2 HOH HOH A . K 4 HOH 2 3 3 HOH HOH A . K 4 HOH 3 9 9 HOH HOH A . K 4 HOH 4 13 13 HOH HOH A . K 4 HOH 5 14 14 HOH HOH A . K 4 HOH 6 15 15 HOH HOH A . K 4 HOH 7 17 17 HOH HOH A . K 4 HOH 8 19 19 HOH HOH A . K 4 HOH 9 22 22 HOH HOH A . K 4 HOH 10 24 24 HOH HOH A . K 4 HOH 11 26 26 HOH HOH A . K 4 HOH 12 28 28 HOH HOH A . K 4 HOH 13 34 34 HOH HOH A . K 4 HOH 14 36 36 HOH HOH A . K 4 HOH 15 38 38 HOH HOH A . K 4 HOH 16 40 40 HOH HOH A . K 4 HOH 17 43 43 HOH HOH A . K 4 HOH 18 45 45 HOH HOH A . K 4 HOH 19 46 46 HOH HOH A . K 4 HOH 20 53 53 HOH HOH A . K 4 HOH 21 54 54 HOH HOH A . K 4 HOH 22 56 56 HOH HOH A . K 4 HOH 23 75 75 HOH HOH A . K 4 HOH 24 81 81 HOH HOH A . K 4 HOH 25 82 82 HOH HOH A . K 4 HOH 26 84 84 HOH HOH A . K 4 HOH 27 85 85 HOH HOH A . K 4 HOH 28 90 90 HOH HOH A . K 4 HOH 29 91 91 HOH HOH A . K 4 HOH 30 96 96 HOH HOH A . L 4 HOH 1 5 5 HOH HOH D . L 4 HOH 2 7 7 HOH HOH D . L 4 HOH 3 8 8 HOH HOH D . L 4 HOH 4 11 11 HOH HOH D . L 4 HOH 5 18 18 HOH HOH D . L 4 HOH 6 20 20 HOH HOH D . L 4 HOH 7 21 21 HOH HOH D . L 4 HOH 8 25 25 HOH HOH D . L 4 HOH 9 31 31 HOH HOH D . L 4 HOH 10 42 42 HOH HOH D . L 4 HOH 11 44 44 HOH HOH D . L 4 HOH 12 47 47 HOH HOH D . L 4 HOH 13 48 48 HOH HOH D . L 4 HOH 14 49 49 HOH HOH D . L 4 HOH 15 50 50 HOH HOH D . L 4 HOH 16 51 51 HOH HOH D . L 4 HOH 17 58 58 HOH HOH D . L 4 HOH 18 64 64 HOH HOH D . L 4 HOH 19 66 66 HOH HOH D . L 4 HOH 20 67 67 HOH HOH D . L 4 HOH 21 68 68 HOH HOH D . L 4 HOH 22 69 69 HOH HOH D . L 4 HOH 23 70 70 HOH HOH D . L 4 HOH 24 71 71 HOH HOH D . L 4 HOH 25 72 72 HOH HOH D . L 4 HOH 26 73 73 HOH HOH D . L 4 HOH 27 74 74 HOH HOH D . L 4 HOH 28 76 76 HOH HOH D . L 4 HOH 29 77 77 HOH HOH D . L 4 HOH 30 78 78 HOH HOH D . L 4 HOH 31 79 79 HOH HOH D . L 4 HOH 32 86 86 HOH HOH D . L 4 HOH 33 87 87 HOH HOH D . L 4 HOH 34 92 92 HOH HOH D . L 4 HOH 35 93 93 HOH HOH D . L 4 HOH 36 94 94 HOH HOH D . L 4 HOH 37 95 95 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 436 ? CG ? E LYS 106 CG 2 1 Y 1 A LYS 436 ? CD ? E LYS 106 CD 3 1 Y 1 A LYS 436 ? CE ? E LYS 106 CE 4 1 Y 1 A LYS 436 ? NZ ? E LYS 106 NZ 5 1 Y 1 D LYS 436 ? CG ? F LYS 106 CG 6 1 Y 1 D LYS 436 ? CD ? F LYS 106 CD 7 1 Y 1 D LYS 436 ? CE ? F LYS 106 CE 8 1 Y 1 D LYS 436 ? NZ ? F LYS 106 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 CNS refinement 1.0 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 1K79 _cell.length_a 93.740 _cell.length_b 74.580 _cell.length_c 79.140 _cell.angle_alpha 90.00 _cell.angle_beta 116.14 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K79 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.entry_id 1K79 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_percent_sol 55.43 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '1.4M-1.6M Sodium Citrate, 100mM Hepes, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'sodium citrate' ? ? ? 1 2 1 Hepes ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2001-02-06 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1K79 _reflns.observed_criterion_sigma_I 0.00 _reflns.observed_criterion_sigma_F 0.00 _reflns.d_resolution_low 17.05 _reflns.d_resolution_high 2.40 _reflns.number_obs 17326 _reflns.number_all 17326 _reflns.percent_possible_obs 89.9 _reflns.pdbx_Rmerge_I_obs 0.0610000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.7 _reflns.B_iso_Wilson_estimate 47.9 _reflns.pdbx_redundancy 3.4 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.49 _reflns_shell.percent_possible_all 58.7 _reflns_shell.Rmerge_I_obs 0.2780000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1K79 _refine.ls_number_reflns_obs 17300 _refine.ls_number_reflns_all 17300 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1024028.00 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 17.05 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 89.8 _refine.ls_R_factor_obs 0.2330000 _refine.ls_R_factor_all 0.2330000 _refine.ls_R_factor_R_work 0.2240000 _refine.ls_R_factor_R_free 0.2790000 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 1723 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 44.6 _refine.aniso_B[1][1] 4.92 _refine.aniso_B[2][2] -5.47 _refine.aniso_B[3][3] 0.54 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -2.43 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.370139 _refine.solvent_model_param_bsol 42.0221 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'Ets-1(331-440) bound to DNA from the Pax5(1-149)+Ets-1(331-440)+DNA complex' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1K79 _refine_analyze.Luzzati_coordinate_error_obs 0.38 _refine_analyze.Luzzati_sigma_a_obs 0.36 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.42 _refine_analyze.Luzzati_sigma_a_free 0.49 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1746 _refine_hist.pdbx_number_atoms_nucleic_acid 1214 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 96 _refine_hist.number_atoms_total 3056 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 17.05 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.40 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.40 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.35 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.99 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.79 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.40 _refine_ls_shell.d_res_low 2.55 _refine_ls_shell.number_reflns_R_work 0 _refine_ls_shell.R_factor_R_work 0.3730000 _refine_ls_shell.percent_reflns_obs 64.9 _refine_ls_shell.R_factor_R_free 0.4190000 _refine_ls_shell.R_factor_R_free_error 0.029 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 206 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1K79 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1K79 _struct.title 'Ets-1(331-440)+GGAA duplex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1K79 _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'ETS domain, transcription factor, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP ETS1_MOUSE 3 ;GSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRY VYRFVCDLQSLLGYTPEELHAMLDVKPDAD ; 331 P27577 ? 2 PDB 1K79 1 ? ? 1K79 ? 3 PDB 1K79 2 ? ? 1K79 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1K79 A 1 ? 110 ? P27577 331 ? 440 ? 331 440 2 1 1K79 D 1 ? 110 ? P27577 331 ? 440 ? 331 440 3 2 1K79 B 1 ? 15 ? 1K79 1 ? 15 ? 1 15 4 3 1K79 C 1 ? 15 ? 1K79 1 ? 15 ? 1 15 5 2 1K79 E 1 ? 15 ? 1K79 1 ? 15 ? 1 15 6 3 1K79 F 1 ? 15 ? 1K79 1 ? 15 ? 1 15 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,G,H,K 2 1 C,D,F,I,J,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU E 7 ? THR E 16 ? LEU A 337 THR A 346 1 ? 10 HELX_P HELX_P2 2 PRO E 38 ? LYS E 49 ? PRO A 368 LYS A 379 1 ? 12 HELX_P HELX_P3 3 TYR E 56 ? TYR E 66 ? TYR A 386 TYR A 396 1 ? 11 HELX_P HELX_P4 4 LEU E 88 ? LEU E 92 ? LEU A 418 LEU A 422 1 ? 5 HELX_P HELX_P5 5 PRO E 96 ? LEU E 103 ? PRO A 426 LEU A 433 1 ? 8 HELX_P HELX_P6 6 LEU F 7 ? THR F 16 ? LEU D 337 THR D 346 1 ? 10 HELX_P HELX_P7 7 PRO F 38 ? LYS F 49 ? PRO D 368 LYS D 379 1 ? 12 HELX_P HELX_P8 8 TYR F 56 ? TYR F 66 ? TYR D 386 TYR D 396 1 ? 11 HELX_P HELX_P9 9 LEU F 88 ? LEU F 92 ? LEU D 418 LEU D 422 1 ? 5 HELX_P HELX_P10 10 PRO F 96 ? LEU F 103 ? PRO D 426 LEU D 433 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 15 N3 ? ? B DA 2 C DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 15 O4 ? ? B DA 2 C DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 14 N3 ? ? B DG 3 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 14 O2 ? ? B DG 3 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 14 N4 ? ? B DG 3 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 13 N1 ? ? B DT 4 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 13 N6 ? ? B DT 4 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 12 N3 ? ? B DG 5 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 12 O2 ? ? B DG 5 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 12 N4 ? ? B DG 5 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 11 N1 ? ? B DC 6 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 11 O6 ? ? B DC 6 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 11 N2 ? ? B DC 6 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 10 N1 ? ? B DC 7 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 10 O6 ? ? B DC 7 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 10 N2 ? ? B DC 7 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 8 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 8 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 8 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 9 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 9 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 9 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 7 N3 ? ? B DA 10 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 7 O4 ? ? B DA 10 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 6 N3 ? ? B DA 11 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 6 O4 ? ? B DA 11 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 5 N3 ? ? B DA 12 C DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 5 O4 ? ? B DA 12 C DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 4 N1 ? ? B DT 13 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 4 N6 ? ? B DT 13 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 3 N3 ? ? B DG 14 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 3 O2 ? ? B DG 14 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 3 N4 ? ? B DG 14 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 15 O4 ? ? E DA 2 F DT 15 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog35 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 14 N3 ? ? E DG 3 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 14 O2 ? ? E DG 3 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 14 N4 ? ? E DG 3 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 13 N1 ? ? E DT 4 F DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 13 N6 ? ? E DT 4 F DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 12 N3 ? ? E DG 5 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 12 O2 ? ? E DG 5 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 12 N4 ? ? E DG 5 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 11 N1 ? ? E DC 6 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 11 O6 ? ? E DC 6 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 11 N2 ? ? E DC 6 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 10 N1 ? ? E DC 7 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 10 O6 ? ? E DC 7 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 10 N2 ? ? E DC 7 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 9 N3 ? ? E DG 8 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 9 O2 ? ? E DG 8 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 9 N4 ? ? E DG 8 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? E DG 9 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? E DG 9 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? E DG 9 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 7 N3 ? ? E DA 10 F DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 7 O4 ? ? E DA 10 F DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 6 N3 ? ? E DA 11 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 6 O4 ? ? E DA 11 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 5 N3 ? ? E DA 12 F DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 5 O4 ? ? E DA 12 F DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? C DT 13 N3 ? ? ? 1_555 D DA 4 N1 ? ? E DT 13 F DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C DT 13 O4 ? ? ? 1_555 D DA 4 N6 ? ? E DT 13 F DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DC 3 N3 ? ? E DG 14 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? C DG 14 N2 ? ? ? 1_555 D DC 3 O2 ? ? E DG 14 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DC 3 N4 ? ? E DG 14 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? C DT 15 O4 ? ? ? 1_555 D DA 2 N6 ? ? E DT 15 F DA 2 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog67 hydrog ? ? B DC 1 N4 ? ? ? 1_555 B DA 2 N1 ? ? C DC 1 C DA 2 2_656 ? ? ? ? ? ? 'DC-DA MISPAIR' ? ? ? hydrog68 hydrog ? ? B DA 2 N1 ? ? ? 1_555 B DC 1 N4 ? ? C DA 2 C DC 1 2_656 ? ? ? ? ? ? 'DA-DC MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE E 24 ? TRP E 26 ? ILE A 354 TRP A 356 A 2 GLU E 32 ? LYS E 34 ? GLU A 362 LYS A 364 A 3 ILE E 72 ? LYS E 74 ? ILE A 402 LYS A 404 A 4 VAL E 81 ? PHE E 84 ? VAL A 411 PHE A 414 B 1 ILE F 24 ? TRP F 26 ? ILE D 354 TRP D 356 B 2 GLU F 32 ? LYS F 34 ? GLU D 362 LYS D 364 B 3 ILE F 72 ? LYS F 74 ? ILE D 402 LYS D 404 B 4 VAL F 81 ? PHE F 84 ? VAL D 411 PHE D 414 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER E 25 ? O SER A 355 N LYS E 34 ? N LYS A 364 A 2 3 N ARG E 83 ? N ARG A 413 O HIS E 73 ? O HIS A 403 A 3 4 O PHE E 33 ? O PHE A 363 N TYR E 82 ? N TYR A 412 B 1 2 O SER F 25 ? O SER D 355 N LYS F 34 ? N LYS D 364 B 2 3 N ARG F 83 ? N ARG D 413 O HIS F 73 ? O HIS D 403 B 3 4 O PHE F 33 ? O PHE D 363 N TYR F 82 ? N TYR D 412 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.13 108.30 1.83 0.30 N 2 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9 B DG 8 ? ? 110.12 108.30 1.82 0.30 N 3 1 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 110.52 108.30 2.22 0.30 N 4 1 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 110.97 108.30 2.67 0.30 N 5 1 "O4'" E DG 8 ? ? "C1'" E DG 8 ? ? N9 E DG 8 ? ? 110.26 108.30 1.96 0.30 N 6 1 "O4'" E DA 10 ? ? "C1'" E DA 10 ? ? N9 E DA 10 ? ? 110.20 108.30 1.90 0.30 N 7 1 "O4'" E DA 11 ? ? "C1'" E DA 11 ? ? N9 E DA 11 ? ? 110.35 108.30 2.05 0.30 N 8 1 "O4'" F DC 1 ? ? "C1'" F DC 1 ? ? N1 F DC 1 ? ? 110.20 108.30 1.90 0.30 N 9 1 "O4'" F DT 5 ? ? "C1'" F DT 5 ? ? N1 F DT 5 ? ? 110.67 108.30 2.37 0.30 N 10 1 "O4'" F DG 11 ? ? "C1'" F DG 11 ? ? N9 F DG 11 ? ? 111.01 108.30 2.71 0.30 N 11 1 "O4'" F DC 12 ? ? "C1'" F DC 12 ? ? N1 F DC 12 ? ? 110.48 108.30 2.18 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 349 ? ? -58.93 7.26 2 1 ASP A 417 ? ? -62.40 69.74 3 1 SER D 349 ? ? -69.06 3.23 4 1 GLN D 351 ? ? -61.89 2.49 5 1 ASP D 434 ? ? 58.55 82.38 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DC _pdbx_validate_planes.auth_asym_id C _pdbx_validate_planes.auth_seq_id 8 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.075 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 331 ? E GLY 1 2 1 Y 1 A SER 332 ? E SER 2 3 1 Y 1 A PRO 437 ? E PRO 107 4 1 Y 1 A ASP 438 ? E ASP 108 5 1 Y 1 A ALA 439 ? E ALA 109 6 1 Y 1 A ASP 440 ? E ASP 110 7 1 Y 1 D GLY 331 ? F GLY 1 8 1 Y 1 D SER 332 ? F SER 2 9 1 Y 1 D PRO 437 ? F PRO 107 10 1 Y 1 D ASP 438 ? F ASP 108 11 1 Y 1 D ALA 439 ? F ALA 109 12 1 Y 1 D ASP 440 ? F ASP 110 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1K79 'double helix' 1K79 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 15 1_555 0.112 -0.096 -0.640 -3.063 -16.412 2.371 1 B_DA2:DT15_C B 2 ? C 15 ? 20 1 1 A DG 3 1_555 B DC 14 1_555 -0.226 0.108 0.048 -2.054 -3.963 -1.252 2 B_DG3:DC14_C B 3 ? C 14 ? 19 1 1 A DT 4 1_555 B DA 13 1_555 -0.026 -0.013 -0.118 5.222 -4.683 -3.824 3 B_DT4:DA13_C B 4 ? C 13 ? 20 1 1 A DG 5 1_555 B DC 12 1_555 -0.255 0.020 -0.104 7.542 -4.346 -2.358 4 B_DG5:DC12_C B 5 ? C 12 ? 19 1 1 A DC 6 1_555 B DG 11 1_555 -0.010 -0.010 -0.638 6.956 -8.481 2.698 5 B_DC6:DG11_C B 6 ? C 11 ? 19 1 1 A DC 7 1_555 B DG 10 1_555 0.024 0.090 0.468 -15.339 2.678 -2.664 6 B_DC7:DG10_C B 7 ? C 10 ? 19 1 1 A DG 8 1_555 B DC 9 1_555 0.207 0.089 0.141 6.024 -1.017 -1.659 7 B_DG8:DC9_C B 8 ? C 9 ? 19 1 1 A DG 9 1_555 B DC 8 1_555 0.046 0.163 0.199 6.924 -14.771 -1.056 8 B_DG9:DC8_C B 9 ? C 8 ? 19 1 1 A DA 10 1_555 B DT 7 1_555 0.096 0.020 -0.057 6.155 -15.314 -1.720 9 B_DA10:DT7_C B 10 ? C 7 ? 20 1 1 A DA 11 1_555 B DT 6 1_555 0.236 0.099 0.070 7.102 -21.130 4.273 10 B_DA11:DT6_C B 11 ? C 6 ? 20 1 1 A DA 12 1_555 B DT 5 1_555 0.141 0.085 -0.494 -9.162 -22.584 0.795 11 B_DA12:DT5_C B 12 ? C 5 ? 20 1 1 A DT 13 1_555 B DA 4 1_555 -0.014 -0.100 -0.299 -4.508 -16.392 0.787 12 B_DT13:DA4_C B 13 ? C 4 ? 20 1 1 A DG 14 1_555 B DC 3 1_555 -0.533 -0.242 -0.100 -6.187 -2.646 -0.702 13 B_DG14:DC3_C B 14 ? C 3 ? 19 1 1 C DA 2 1_555 D DT 15 1_555 -0.108 -3.071 1.070 -13.818 22.267 90.940 14 E_DA2:DT15_F E 2 ? F 15 ? ? ? 1 C DG 3 1_555 D DC 14 1_555 -0.027 -0.258 -0.174 -2.178 -3.607 0.121 15 E_DG3:DC14_F E 3 ? F 14 ? 19 1 1 C DT 4 1_555 D DA 13 1_555 -0.317 -0.022 -0.439 6.822 -0.732 -3.004 16 E_DT4:DA13_F E 4 ? F 13 ? 20 1 1 C DG 5 1_555 D DC 12 1_555 -0.148 -0.154 -0.174 1.520 -8.109 -1.714 17 E_DG5:DC12_F E 5 ? F 12 ? 19 1 1 C DC 6 1_555 D DG 11 1_555 0.057 0.158 -0.270 -0.802 -10.209 2.603 18 E_DC6:DG11_F E 6 ? F 11 ? 19 1 1 C DC 7 1_555 D DG 10 1_555 0.398 -0.083 0.345 -13.603 -5.041 -0.980 19 E_DC7:DG10_F E 7 ? F 10 ? 19 1 1 C DG 8 1_555 D DC 9 1_555 -0.053 0.028 0.191 9.499 -0.216 1.934 20 E_DG8:DC9_F E 8 ? F 9 ? 19 1 1 C DG 9 1_555 D DC 8 1_555 -0.012 0.093 -0.342 -0.897 -11.939 -1.891 21 E_DG9:DC8_F E 9 ? F 8 ? 19 1 1 C DA 10 1_555 D DT 7 1_555 0.220 0.053 0.297 2.526 -18.484 -4.576 22 E_DA10:DT7_F E 10 ? F 7 ? 20 1 1 C DA 11 1_555 D DT 6 1_555 0.070 0.080 0.173 5.161 -21.837 1.028 23 E_DA11:DT6_F E 11 ? F 6 ? 20 1 1 C DA 12 1_555 D DT 5 1_555 -0.129 0.084 0.696 4.270 -20.384 -4.080 24 E_DA12:DT5_F E 12 ? F 5 ? 20 1 1 C DT 13 1_555 D DA 4 1_555 0.184 -0.230 0.642 -15.341 -15.286 3.285 25 E_DT13:DA4_F E 13 ? F 4 ? 20 1 1 C DG 14 1_555 D DC 3 1_555 0.057 -0.110 -0.170 -1.909 -1.293 -0.295 26 E_DG14:DC3_F E 14 ? F 3 ? 19 1 1 C DT 15 1_555 D DA 2 1_555 0.328 1.435 -0.290 -12.619 -28.058 -102.568 27 E_DT15:DA2_F E 15 ? F 2 ? ? ? 1 B DC 1 1_555 B DA 2 2_656 -3.614 2.628 2.307 8.814 -0.269 -112.275 28 C_DC1:DA2_C C 1 ? C 2 ? ? ? 1 B DA 2 1_555 B DC 1 2_656 3.614 -2.628 -2.307 -8.814 0.269 112.275 29 C_DA2:DC1_C C 2 ? C 1 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 15 1_555 A DG 3 1_555 B DC 14 1_555 -0.344 0.263 3.144 -8.206 8.300 32.947 -0.802 -0.652 3.113 14.095 13.936 34.899 1 BB_DA2DG3:DC14DT15_CC B 2 ? C 15 ? B 3 ? C 14 ? 1 A DG 3 1_555 B DC 14 1_555 A DT 4 1_555 B DA 13 1_555 0.201 -0.419 3.164 1.664 4.862 29.094 -1.812 -0.055 3.061 9.584 -3.280 29.534 2 BB_DG3DT4:DA13DC14_CC B 3 ? C 14 ? B 4 ? C 13 ? 1 A DT 4 1_555 B DA 13 1_555 A DG 5 1_555 B DC 12 1_555 -0.346 -0.435 3.180 -0.890 8.652 34.146 -1.954 0.445 2.992 14.445 1.485 35.204 3 BB_DT4DG5:DC12DA13_CC B 4 ? C 13 ? B 5 ? C 12 ? 1 A DG 5 1_555 B DC 12 1_555 A DC 6 1_555 B DG 11 1_555 0.958 -0.387 3.215 4.664 7.785 30.068 -2.167 -0.902 3.130 14.593 -8.742 31.378 4 BB_DG5DC6:DG11DC12_CC B 5 ? C 12 ? B 6 ? C 11 ? 1 A DC 6 1_555 B DG 11 1_555 A DC 7 1_555 B DG 10 1_555 -0.526 -1.211 3.791 -8.784 15.819 30.653 -4.541 -0.554 2.888 27.159 15.081 35.484 5 BB_DC6DC7:DG10DG11_CC B 6 ? C 11 ? B 7 ? C 10 ? 1 A DC 7 1_555 B DG 10 1_555 A DG 8 1_555 B DC 9 1_555 0.534 0.795 2.986 3.125 3.405 34.345 0.848 -0.448 3.083 5.734 -5.262 34.645 6 BB_DC7DG8:DC9DG10_CC B 7 ? C 10 ? B 8 ? C 9 ? 1 A DG 8 1_555 B DC 9 1_555 A DG 9 1_555 B DC 8 1_555 -1.204 -0.504 3.236 -4.942 5.136 33.657 -1.658 1.262 3.264 8.748 8.418 34.382 7 BB_DG8DG9:DC8DC9_CC B 8 ? C 9 ? B 9 ? C 8 ? 1 A DG 9 1_555 B DC 8 1_555 A DA 10 1_555 B DT 7 1_555 -0.510 -0.587 3.182 -1.563 8.526 30.377 -2.591 0.660 2.935 15.869 2.910 31.562 8 BB_DG9DA10:DT7DC8_CC B 9 ? C 8 ? B 10 ? C 7 ? 1 A DA 10 1_555 B DT 7 1_555 A DA 11 1_555 B DT 6 1_555 0.037 -0.410 3.184 -0.300 2.935 30.845 -1.315 -0.125 3.132 5.503 0.562 30.983 9 BB_DA10DA11:DT6DT7_CC B 10 ? C 7 ? B 11 ? C 6 ? 1 A DA 11 1_555 B DT 6 1_555 A DA 12 1_555 B DT 5 1_555 -0.118 -0.177 3.532 1.745 3.472 42.764 -0.612 0.347 3.500 4.750 -2.387 42.932 10 BB_DA11DA12:DT5DT6_CC B 11 ? C 6 ? B 12 ? C 5 ? 1 A DA 12 1_555 B DT 5 1_555 A DT 13 1_555 B DA 4 1_555 -0.544 -0.462 3.155 -1.528 0.421 27.623 -1.066 0.778 3.173 0.882 3.197 27.668 11 BB_DA12DT13:DA4DT5_CC B 12 ? C 5 ? B 13 ? C 4 ? 1 A DT 13 1_555 B DA 4 1_555 A DG 14 1_555 B DC 3 1_555 0.588 1.092 3.272 -1.414 5.542 34.528 0.963 -1.196 3.375 9.258 2.361 34.985 12 BB_DT13DG14:DC3DA4_CC B 13 ? C 4 ? B 14 ? C 3 ? 1 C DA 2 1_555 D DT 15 1_555 C DG 3 1_555 D DC 14 1_555 -1.384 -2.526 -0.918 132.599 -103.869 90.136 -1.424 0.492 -0.321 -52.971 -67.623 171.841 13 EE_DA2DG3:DC14DT15_FF E 2 ? F 15 ? E 3 ? F 14 ? 1 C DG 3 1_555 D DC 14 1_555 C DT 4 1_555 D DA 13 1_555 -0.900 -0.195 3.106 1.523 1.787 25.789 -0.900 2.405 3.029 3.994 -3.404 25.893 14 EE_DG3DT4:DA13DC14_FF E 3 ? F 14 ? E 4 ? F 13 ? 1 C DT 4 1_555 D DA 13 1_555 C DG 5 1_555 D DC 12 1_555 -0.427 -0.833 3.360 -8.421 7.106 36.852 -2.170 -0.422 3.171 10.943 12.969 38.409 15 EE_DT4DG5:DC12DA13_FF E 4 ? F 13 ? E 5 ? F 12 ? 1 C DG 5 1_555 D DC 12 1_555 C DC 6 1_555 D DG 11 1_555 0.772 -0.459 3.285 2.225 2.404 33.762 -1.176 -0.963 3.288 4.127 -3.820 33.916 16 EE_DG5DC6:DG11DC12_FF E 5 ? F 12 ? E 6 ? F 11 ? 1 C DC 6 1_555 D DG 11 1_555 C DC 7 1_555 D DG 10 1_555 -0.688 -0.881 3.561 -6.499 9.113 30.177 -3.345 -0.009 3.241 16.794 11.976 32.141 17 EE_DC6DC7:DG10DG11_FF E 6 ? F 11 ? E 7 ? F 10 ? 1 C DC 7 1_555 D DG 10 1_555 C DG 8 1_555 D DC 9 1_555 0.443 1.042 2.924 1.588 2.556 32.007 1.465 -0.542 3.014 4.623 -2.873 32.144 18 EE_DC7DG8:DC9DG10_FF E 7 ? F 10 ? E 8 ? F 9 ? 1 C DG 8 1_555 D DC 9 1_555 C DG 9 1_555 D DC 8 1_555 -1.249 -0.588 3.553 -1.011 5.930 33.149 -2.055 1.978 3.435 10.288 1.755 33.675 19 EE_DG8DG9:DC8DC9_FF E 8 ? F 9 ? E 9 ? F 8 ? 1 C DG 9 1_555 D DC 8 1_555 C DA 10 1_555 D DT 7 1_555 -0.061 -0.621 3.106 -4.881 4.693 29.400 -2.091 -0.815 2.945 9.096 9.459 30.153 20 EE_DG9DA10:DT7DC8_FF E 9 ? F 8 ? E 10 ? F 7 ? 1 C DA 10 1_555 D DT 7 1_555 C DA 11 1_555 D DT 6 1_555 0.213 -0.402 3.138 4.015 6.043 31.571 -1.737 0.292 3.014 10.927 -7.259 32.373 21 EE_DA10DA11:DT6DT7_FF E 10 ? F 7 ? E 11 ? F 6 ? 1 C DA 11 1_555 D DT 6 1_555 C DA 12 1_555 D DT 5 1_555 0.002 -0.328 2.971 -3.506 -0.457 42.655 -0.408 -0.321 2.965 -0.627 4.809 42.794 22 EE_DA11DA12:DT5DT6_FF E 11 ? F 6 ? E 12 ? F 5 ? 1 C DA 12 1_555 D DT 5 1_555 C DT 13 1_555 D DA 4 1_555 -0.188 -0.982 3.919 0.308 0.725 31.390 -1.977 0.416 3.894 1.340 -0.569 31.400 23 EE_DA12DT13:DA4DT5_FF E 12 ? F 5 ? E 13 ? F 4 ? 1 C DT 13 1_555 D DA 4 1_555 C DG 14 1_555 D DC 3 1_555 0.074 1.199 3.022 4.127 -0.911 35.591 2.070 0.425 2.981 -1.483 -6.722 35.833 24 EE_DT13DG14:DC3DA4_FF E 13 ? F 4 ? E 14 ? F 3 ? 1 C DG 14 1_555 D DC 3 1_555 C DT 15 1_555 D DA 2 1_555 0.627 0.764 2.617 8.871 6.069 86.554 0.446 -0.297 2.698 4.412 -6.449 87.088 25 EE_DG14DT15:DA2DC3_FF E 14 ? F 3 ? E 15 ? F 2 ? 1 B DC 1 1_555 B DA 2 2_656 B DA 2 1_555 B DC 1 2_656 -6.074 -3.628 0.000 -164.677 45.822 -180.000 1.814 -3.037 0.000 -22.911 -82.339 -180.000 26 CC_DC1DA2:DC1DA2_CC C 1 ? C 2 ? C 2 ? C 1 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Ets-1(331-440) bound to DNA from the Pax5(1-149)+Ets-1(331-440)+DNA complex' # _atom_sites.entry_id 1K79 _atom_sites.fract_transf_matrix[1][1] 0.010668 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005235 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013408 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014075 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_