data_1K7J # _entry.id 1K7J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1K7J RCSB RCSB014658 WWPDB D_1000014658 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC115 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1K7J _pdbx_database_status.recvd_initial_deposition_date 2001-10-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, R.' 1 'Dementieva, I.' 2 'Thorn, J.' 3 'Donnelly, M.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Structural Genomics, protein TF1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhang, R.' 1 primary 'Dementieva, I.' 2 primary 'Thorn, J.' 3 primary 'Donnelly, M.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 1K7J _cell.length_a 56.260 _cell.length_b 56.260 _cell.length_c 135.301 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K7J _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein yciO' 23568.027 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 235 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'protein TF1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNA(MSE)ERICRIRQLPDGHNFTL(MSE) CRDLSELSTYSFVDNVAFRL(MSE)KNNTPGNYTFILKGTKEVPRRLLQEKRKTIG(MSE)RVPSNPIAQALLEALGEP (MSE)LSTSL(MSE)LPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL ; _entity_poly.pdbx_seq_one_letter_code_can ;MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC115 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 GLN n 1 4 PHE n 1 5 PHE n 1 6 TYR n 1 7 ILE n 1 8 HIS n 1 9 PRO n 1 10 ASP n 1 11 ASN n 1 12 PRO n 1 13 GLN n 1 14 GLN n 1 15 ARG n 1 16 LEU n 1 17 ILE n 1 18 ASN n 1 19 GLN n 1 20 ALA n 1 21 VAL n 1 22 GLU n 1 23 ILE n 1 24 VAL n 1 25 ARG n 1 26 LYS n 1 27 GLY n 1 28 GLY n 1 29 VAL n 1 30 ILE n 1 31 VAL n 1 32 TYR n 1 33 PRO n 1 34 THR n 1 35 ASP n 1 36 SER n 1 37 GLY n 1 38 TYR n 1 39 ALA n 1 40 LEU n 1 41 GLY n 1 42 CYS n 1 43 LYS n 1 44 ILE n 1 45 GLU n 1 46 ASP n 1 47 LYS n 1 48 ASN n 1 49 ALA n 1 50 MSE n 1 51 GLU n 1 52 ARG n 1 53 ILE n 1 54 CYS n 1 55 ARG n 1 56 ILE n 1 57 ARG n 1 58 GLN n 1 59 LEU n 1 60 PRO n 1 61 ASP n 1 62 GLY n 1 63 HIS n 1 64 ASN n 1 65 PHE n 1 66 THR n 1 67 LEU n 1 68 MSE n 1 69 CYS n 1 70 ARG n 1 71 ASP n 1 72 LEU n 1 73 SER n 1 74 GLU n 1 75 LEU n 1 76 SER n 1 77 THR n 1 78 TYR n 1 79 SER n 1 80 PHE n 1 81 VAL n 1 82 ASP n 1 83 ASN n 1 84 VAL n 1 85 ALA n 1 86 PHE n 1 87 ARG n 1 88 LEU n 1 89 MSE n 1 90 LYS n 1 91 ASN n 1 92 ASN n 1 93 THR n 1 94 PRO n 1 95 GLY n 1 96 ASN n 1 97 TYR n 1 98 THR n 1 99 PHE n 1 100 ILE n 1 101 LEU n 1 102 LYS n 1 103 GLY n 1 104 THR n 1 105 LYS n 1 106 GLU n 1 107 VAL n 1 108 PRO n 1 109 ARG n 1 110 ARG n 1 111 LEU n 1 112 LEU n 1 113 GLN n 1 114 GLU n 1 115 LYS n 1 116 ARG n 1 117 LYS n 1 118 THR n 1 119 ILE n 1 120 GLY n 1 121 MSE n 1 122 ARG n 1 123 VAL n 1 124 PRO n 1 125 SER n 1 126 ASN n 1 127 PRO n 1 128 ILE n 1 129 ALA n 1 130 GLN n 1 131 ALA n 1 132 LEU n 1 133 LEU n 1 134 GLU n 1 135 ALA n 1 136 LEU n 1 137 GLY n 1 138 GLU n 1 139 PRO n 1 140 MSE n 1 141 LEU n 1 142 SER n 1 143 THR n 1 144 SER n 1 145 LEU n 1 146 MSE n 1 147 LEU n 1 148 PRO n 1 149 GLY n 1 150 SER n 1 151 GLU n 1 152 PHE n 1 153 THR n 1 154 GLU n 1 155 SER n 1 156 ASP n 1 157 PRO n 1 158 GLU n 1 159 GLU n 1 160 ILE n 1 161 LYS n 1 162 ASP n 1 163 ARG n 1 164 LEU n 1 165 GLU n 1 166 LYS n 1 167 GLN n 1 168 VAL n 1 169 ASP n 1 170 LEU n 1 171 ILE n 1 172 ILE n 1 173 HIS n 1 174 GLY n 1 175 GLY n 1 176 TYR n 1 177 LEU n 1 178 GLY n 1 179 GLN n 1 180 LYS n 1 181 PRO n 1 182 THR n 1 183 THR n 1 184 VAL n 1 185 ILE n 1 186 ASP n 1 187 LEU n 1 188 THR n 1 189 ASP n 1 190 ASP n 1 191 THR n 1 192 PRO n 1 193 VAL n 1 194 VAL n 1 195 VAL n 1 196 ARG n 1 197 GLU n 1 198 GLY n 1 199 VAL n 1 200 GLY n 1 201 ASP n 1 202 VAL n 1 203 LYS n 1 204 PRO n 1 205 PHE n 1 206 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene yciO _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MC1061 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YCIO_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P45847 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1K7J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 206 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P45847 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 206 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 206 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1K7J MSE A 1 ? UNP P45847 MET 1 'MODIFIED RESIDUE' 1 1 1 1K7J MSE A 50 ? UNP P45847 MET 50 'MODIFIED RESIDUE' 50 2 1 1K7J MSE A 68 ? UNP P45847 MET 68 'MODIFIED RESIDUE' 68 3 1 1K7J MSE A 89 ? UNP P45847 MET 89 'MODIFIED RESIDUE' 89 4 1 1K7J MSE A 121 ? UNP P45847 MET 121 'MODIFIED RESIDUE' 121 5 1 1K7J MSE A 140 ? UNP P45847 MET 140 'MODIFIED RESIDUE' 140 6 1 1K7J MSE A 146 ? UNP P45847 MET 146 'MODIFIED RESIDUE' 146 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1K7J _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_percent_sol 53.07 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details '30% Ammonium sulfate, 0.1M Na citrate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-2 _diffrn_detector.pdbx_collection_date 2001-08-22 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9795 1.0 2 0.9798 1.0 3 0.94656 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9795, 0.9798, 0.94656' # _reflns.entry_id 1K7J _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 4.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.4 _reflns.number_obs 49419 _reflns.number_all 49767 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.0840000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.03 _reflns.B_iso_Wilson_estimate 11.1 _reflns.pdbx_redundancy 12.57 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.4 _reflns_shell.d_res_low 1.45 _reflns_shell.percent_possible_all 95.2 _reflns_shell.Rmerge_I_obs 0.2930000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.63 _reflns_shell.pdbx_redundancy 4.28 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4679 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1K7J _refine.ls_number_reflns_obs 77132 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 409500.45 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 45.84 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 81.7 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1950000 _refine.ls_R_factor_R_free 0.2030000 _refine.ls_R_factor_R_free_error 0.003 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 3724 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 15.2 _refine.aniso_B[1][1] 1.97 _refine.aniso_B[2][2] 1.97 _refine.aniso_B[3][3] -3.94 _refine.aniso_B[1][2] 1.17 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.394199 _refine.solvent_model_param_bsol 45.435 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;Used mlhl:maximum likelihood target using amplitudes in CNS ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1K7J _refine_analyze.Luzzati_coordinate_error_obs 0.15 _refine_analyze.Luzzati_sigma_a_obs 0.00 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.16 _refine_analyze.Luzzati_sigma_a_free 0.02 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1628 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 235 _refine_hist.number_atoms_total 1868 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 45.84 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.82 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.40 _refine_ls_shell.d_res_low 1.49 _refine_ls_shell.number_reflns_R_work 7457 _refine_ls_shell.R_factor_R_work 0.1870000 _refine_ls_shell.percent_reflns_obs 50.0 _refine_ls_shell.R_factor_R_free 0.1890000 _refine_ls_shell.R_factor_R_free_error 0.009 _refine_ls_shell.percent_reflns_R_free 5.2 _refine_ls_shell.number_reflns_R_free 409 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' 3 ION.PARAM ? 'X-RAY DIFFRACTION' # _struct.entry_id 1K7J _struct.title 'Structural Genomics, protein TF1' _struct.pdbx_descriptor 'Protein yciO' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1K7J _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;structural genomics, yciO, putative translation factor, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 13 ? LYS A 26 ? GLN A 13 LYS A 26 1 ? 14 HELX_P HELX_P2 2 ASP A 46 ? GLN A 58 ? ASP A 46 GLN A 58 1 ? 13 HELX_P HELX_P3 3 ASP A 71 ? SER A 79 ? ASP A 71 SER A 79 1 ? 9 HELX_P HELX_P4 4 ASP A 82 ? ASN A 91 ? ASP A 82 ASN A 91 1 ? 10 HELX_P HELX_P5 5 PRO A 108 ? LEU A 112 ? PRO A 108 LEU A 112 5 ? 5 HELX_P HELX_P6 6 ASN A 126 ? GLY A 137 ? ASN A 126 GLY A 137 1 ? 12 HELX_P HELX_P7 7 ASP A 156 ? GLU A 165 ? ASP A 156 GLU A 165 1 ? 10 HELX_P HELX_P8 8 THR A 188 ? THR A 191 ? THR A 188 THR A 191 5 ? 4 HELX_P HELX_P9 9 VAL A 202 ? LEU A 206 ? VAL A 202 LEU A 206 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A SER 2 N ? ? A MSE 1 A SER 2 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A ALA 49 C ? ? ? 1_555 A MSE 50 N ? ? A ALA 49 A MSE 50 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A MSE 50 C ? ? ? 1_555 A GLU 51 N ? ? A MSE 50 A GLU 51 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale ? ? A LEU 67 C ? ? ? 1_555 A MSE 68 N ? ? A LEU 67 A MSE 68 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A MSE 68 C ? ? ? 1_555 A CYS 69 N ? ? A MSE 68 A CYS 69 1_555 ? ? ? ? ? ? ? 1.334 ? covale6 covale ? ? A LEU 88 C ? ? ? 1_555 A MSE 89 N ? ? A LEU 88 A MSE 89 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale ? ? A MSE 89 C ? ? ? 1_555 A LYS 90 N ? ? A MSE 89 A LYS 90 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A GLY 120 C ? ? ? 1_555 A MSE 121 N ? ? A GLY 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.329 ? covale9 covale ? ? A MSE 121 C ? ? ? 1_555 A ARG 122 N ? ? A MSE 121 A ARG 122 1_555 ? ? ? ? ? ? ? 1.327 ? covale10 covale ? ? A PRO 139 C ? ? ? 1_555 A MSE 140 N ? ? A PRO 139 A MSE 140 1_555 ? ? ? ? ? ? ? 1.323 ? covale11 covale ? ? A MSE 140 C ? ? ? 1_555 A LEU 141 N ? ? A MSE 140 A LEU 141 1_555 ? ? ? ? ? ? ? 1.330 ? covale12 covale ? ? A LEU 145 C ? ? ? 1_555 A MSE 146 N ? ? A LEU 145 A MSE 146 1_555 ? ? ? ? ? ? ? 1.326 ? covale13 covale ? ? A MSE 146 C ? ? ? 1_555 A LEU 147 N ? ? A MSE 146 A LEU 147 1_555 ? ? ? ? ? ? ? 1.331 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 93 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 93 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 94 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 94 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.16 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel A 8 9 ? parallel A 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 3 ? TYR A 6 ? GLN A 3 TYR A 6 A 2 LEU A 170 ? HIS A 173 ? LEU A 170 HIS A 173 A 3 ILE A 30 ? THR A 34 ? ILE A 30 THR A 34 A 4 GLY A 37 ? LYS A 43 ? GLY A 37 LYS A 43 A 5 MSE A 140 ? SER A 144 ? MSE A 140 SER A 144 A 6 THR A 66 ? MSE A 68 ? THR A 66 MSE A 68 A 7 THR A 118 ? ARG A 122 ? THR A 118 ARG A 122 A 8 TYR A 97 ? LYS A 102 ? TYR A 97 LYS A 102 A 9 THR A 183 ? ASP A 186 ? THR A 183 ASP A 186 A 10 VAL A 193 ? ARG A 196 ? VAL A 193 ARG A 196 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 5 ? N PHE A 5 O HIS A 173 ? O HIS A 173 A 2 3 O ILE A 172 ? O ILE A 172 N VAL A 31 ? N VAL A 31 A 3 4 N ILE A 30 ? N ILE A 30 O GLY A 41 ? O GLY A 41 A 4 5 N LEU A 40 ? N LEU A 40 O THR A 143 ? O THR A 143 A 5 6 O SER A 142 ? O SER A 142 N THR A 66 ? N THR A 66 A 6 7 N LEU A 67 ? N LEU A 67 O GLY A 120 ? O GLY A 120 A 7 8 O MSE A 121 ? O MSE A 121 N PHE A 99 ? N PHE A 99 A 8 9 N ILE A 100 ? N ILE A 100 O ILE A 185 ? O ILE A 185 A 9 10 N ASP A 186 ? N ASP A 186 O VAL A 193 ? O VAL A 193 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 207' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 57 ? ARG A 57 . ? 1_555 ? 2 AC1 8 HIS A 63 ? HIS A 63 . ? 1_555 ? 3 AC1 8 THR A 66 ? THR A 66 . ? 1_555 ? 4 AC1 8 THR A 143 ? THR A 143 . ? 1_555 ? 5 AC1 8 SER A 144 ? SER A 144 . ? 1_555 ? 6 AC1 8 ARG A 196 ? ARG A 196 . ? 1_555 ? 7 AC1 8 HOH C . ? HOH A 302 . ? 1_555 ? 8 AC1 8 HOH C . ? HOH A 317 . ? 1_555 ? # _database_PDB_matrix.entry_id 1K7J _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1K7J _atom_sites.fract_transf_matrix[1][1] 0.017775 _atom_sites.fract_transf_matrix[1][2] 0.010262 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020524 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007391 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 MSE 50 50 50 MSE MSE A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 MSE 68 68 68 MSE MSE A . n A 1 69 CYS 69 69 69 CYS CYS A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 MSE 89 89 89 MSE MSE A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 MSE 121 121 121 MSE MSE A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 ASN 126 126 126 ASN ASN A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 GLN 130 130 130 GLN GLN A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 PRO 139 139 139 PRO PRO A . n A 1 140 MSE 140 140 140 MSE MSE A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 MSE 146 146 146 MSE MSE A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 ARG 163 163 163 ARG ARG A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 LYS 166 166 166 LYS LYS A . n A 1 167 GLN 167 167 167 GLN GLN A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 HIS 173 173 173 HIS HIS A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 TYR 176 176 176 TYR TYR A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 GLN 179 179 179 GLN GLN A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 THR 182 182 182 THR THR A . n A 1 183 THR 183 183 183 THR THR A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 ASP 186 186 186 ASP ASP A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 ASP 189 189 189 ASP ASP A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 PRO 192 192 192 PRO PRO A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 ASP 201 201 201 ASP ASP A . n A 1 202 VAL 202 202 202 VAL VAL A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 PRO 204 204 204 PRO PRO A . n A 1 205 PHE 205 205 205 PHE PHE A . n A 1 206 LEU 206 206 206 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 50 A MSE 50 ? MET SELENOMETHIONINE 3 A MSE 68 A MSE 68 ? MET SELENOMETHIONINE 4 A MSE 89 A MSE 89 ? MET SELENOMETHIONINE 5 A MSE 121 A MSE 121 ? MET SELENOMETHIONINE 6 A MSE 140 A MSE 140 ? MET SELENOMETHIONINE 7 A MSE 146 A MSE 146 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-08-14 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 DTCOLLECT 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 60 ? ? -66.17 -179.33 2 1 ASN A 92 ? ? -140.05 45.18 3 1 ASN A 96 ? ? 64.98 -8.26 4 1 ASP A 190 ? ? 48.65 29.74 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 207 207 SO4 SO4 A . C 3 HOH 1 301 301 HOH TIP A . C 3 HOH 2 302 302 HOH TIP A . C 3 HOH 3 303 303 HOH TIP A . C 3 HOH 4 304 304 HOH TIP A . C 3 HOH 5 305 305 HOH TIP A . C 3 HOH 6 306 306 HOH TIP A . C 3 HOH 7 307 307 HOH TIP A . C 3 HOH 8 308 308 HOH TIP A . C 3 HOH 9 309 309 HOH TIP A . C 3 HOH 10 310 310 HOH TIP A . C 3 HOH 11 311 311 HOH TIP A . C 3 HOH 12 312 312 HOH TIP A . C 3 HOH 13 313 313 HOH TIP A . C 3 HOH 14 314 314 HOH TIP A . C 3 HOH 15 315 315 HOH TIP A . C 3 HOH 16 316 316 HOH TIP A . C 3 HOH 17 317 317 HOH TIP A . C 3 HOH 18 318 318 HOH TIP A . C 3 HOH 19 319 319 HOH TIP A . C 3 HOH 20 320 320 HOH TIP A . C 3 HOH 21 321 321 HOH TIP A . C 3 HOH 22 322 322 HOH TIP A . C 3 HOH 23 323 323 HOH TIP A . C 3 HOH 24 324 324 HOH TIP A . C 3 HOH 25 325 325 HOH TIP A . C 3 HOH 26 326 326 HOH TIP A . C 3 HOH 27 327 327 HOH TIP A . C 3 HOH 28 328 328 HOH TIP A . C 3 HOH 29 329 329 HOH TIP A . C 3 HOH 30 330 330 HOH TIP A . C 3 HOH 31 331 331 HOH TIP A . C 3 HOH 32 332 332 HOH TIP A . C 3 HOH 33 333 333 HOH TIP A . C 3 HOH 34 334 334 HOH TIP A . C 3 HOH 35 335 335 HOH TIP A . C 3 HOH 36 336 336 HOH TIP A . C 3 HOH 37 337 337 HOH TIP A . C 3 HOH 38 338 338 HOH TIP A . C 3 HOH 39 339 339 HOH TIP A . C 3 HOH 40 340 340 HOH TIP A . C 3 HOH 41 341 341 HOH TIP A . C 3 HOH 42 342 342 HOH TIP A . C 3 HOH 43 343 343 HOH TIP A . C 3 HOH 44 344 344 HOH TIP A . C 3 HOH 45 345 345 HOH TIP A . C 3 HOH 46 346 346 HOH TIP A . C 3 HOH 47 347 347 HOH TIP A . C 3 HOH 48 348 348 HOH TIP A . C 3 HOH 49 349 349 HOH TIP A . C 3 HOH 50 350 350 HOH TIP A . C 3 HOH 51 351 351 HOH TIP A . C 3 HOH 52 352 352 HOH TIP A . C 3 HOH 53 353 353 HOH TIP A . C 3 HOH 54 354 354 HOH TIP A . C 3 HOH 55 355 355 HOH TIP A . C 3 HOH 56 356 356 HOH TIP A . C 3 HOH 57 357 357 HOH TIP A . C 3 HOH 58 358 358 HOH TIP A . C 3 HOH 59 359 359 HOH TIP A . C 3 HOH 60 360 360 HOH TIP A . C 3 HOH 61 361 361 HOH TIP A . C 3 HOH 62 362 362 HOH TIP A . C 3 HOH 63 363 363 HOH TIP A . C 3 HOH 64 364 364 HOH TIP A . C 3 HOH 65 365 365 HOH TIP A . C 3 HOH 66 366 366 HOH TIP A . C 3 HOH 67 367 367 HOH TIP A . C 3 HOH 68 368 368 HOH TIP A . C 3 HOH 69 369 369 HOH TIP A . C 3 HOH 70 370 370 HOH TIP A . C 3 HOH 71 371 371 HOH TIP A . C 3 HOH 72 372 372 HOH TIP A . C 3 HOH 73 373 373 HOH TIP A . C 3 HOH 74 374 374 HOH TIP A . C 3 HOH 75 375 375 HOH TIP A . C 3 HOH 76 376 376 HOH TIP A . C 3 HOH 77 377 377 HOH TIP A . C 3 HOH 78 378 378 HOH TIP A . C 3 HOH 79 379 379 HOH TIP A . C 3 HOH 80 380 380 HOH TIP A . C 3 HOH 81 381 381 HOH TIP A . C 3 HOH 82 382 382 HOH TIP A . C 3 HOH 83 383 383 HOH TIP A . C 3 HOH 84 384 384 HOH TIP A . C 3 HOH 85 385 385 HOH TIP A . C 3 HOH 86 386 386 HOH TIP A . C 3 HOH 87 387 387 HOH TIP A . C 3 HOH 88 388 388 HOH TIP A . C 3 HOH 89 389 389 HOH TIP A . C 3 HOH 90 390 390 HOH TIP A . C 3 HOH 91 391 391 HOH TIP A . C 3 HOH 92 392 392 HOH TIP A . C 3 HOH 93 393 393 HOH TIP A . C 3 HOH 94 394 394 HOH TIP A . C 3 HOH 95 395 395 HOH TIP A . C 3 HOH 96 396 396 HOH TIP A . C 3 HOH 97 397 397 HOH TIP A . C 3 HOH 98 398 398 HOH TIP A . C 3 HOH 99 399 399 HOH TIP A . C 3 HOH 100 400 400 HOH TIP A . C 3 HOH 101 401 401 HOH TIP A . C 3 HOH 102 402 402 HOH TIP A . C 3 HOH 103 403 403 HOH TIP A . C 3 HOH 104 404 404 HOH TIP A . C 3 HOH 105 405 405 HOH TIP A . C 3 HOH 106 406 406 HOH TIP A . C 3 HOH 107 407 407 HOH TIP A . C 3 HOH 108 408 408 HOH TIP A . C 3 HOH 109 409 409 HOH TIP A . C 3 HOH 110 410 410 HOH TIP A . C 3 HOH 111 411 411 HOH TIP A . C 3 HOH 112 412 412 HOH TIP A . C 3 HOH 113 413 413 HOH TIP A . C 3 HOH 114 414 414 HOH TIP A . C 3 HOH 115 415 415 HOH TIP A . C 3 HOH 116 416 416 HOH TIP A . C 3 HOH 117 417 417 HOH TIP A . C 3 HOH 118 418 418 HOH TIP A . C 3 HOH 119 419 419 HOH TIP A . C 3 HOH 120 420 420 HOH TIP A . C 3 HOH 121 421 421 HOH TIP A . C 3 HOH 122 422 422 HOH TIP A . C 3 HOH 123 423 423 HOH TIP A . C 3 HOH 124 424 424 HOH TIP A . C 3 HOH 125 425 425 HOH TIP A . C 3 HOH 126 426 426 HOH TIP A . C 3 HOH 127 427 427 HOH TIP A . C 3 HOH 128 428 428 HOH TIP A . C 3 HOH 129 429 429 HOH TIP A . C 3 HOH 130 430 430 HOH TIP A . C 3 HOH 131 431 431 HOH TIP A . C 3 HOH 132 432 432 HOH TIP A . C 3 HOH 133 433 433 HOH TIP A . C 3 HOH 134 434 434 HOH TIP A . C 3 HOH 135 435 435 HOH TIP A . C 3 HOH 136 436 436 HOH TIP A . C 3 HOH 137 437 437 HOH TIP A . C 3 HOH 138 438 438 HOH TIP A . C 3 HOH 139 439 439 HOH TIP A . C 3 HOH 140 440 440 HOH TIP A . C 3 HOH 141 441 441 HOH TIP A . C 3 HOH 142 442 442 HOH TIP A . C 3 HOH 143 443 443 HOH TIP A . C 3 HOH 144 444 444 HOH TIP A . C 3 HOH 145 445 445 HOH TIP A . C 3 HOH 146 446 446 HOH TIP A . C 3 HOH 147 447 447 HOH TIP A . C 3 HOH 148 448 448 HOH TIP A . C 3 HOH 149 449 449 HOH TIP A . C 3 HOH 150 450 450 HOH TIP A . C 3 HOH 151 451 451 HOH TIP A . C 3 HOH 152 452 452 HOH TIP A . C 3 HOH 153 453 453 HOH TIP A . C 3 HOH 154 454 454 HOH TIP A . C 3 HOH 155 455 455 HOH TIP A . C 3 HOH 156 456 456 HOH TIP A . C 3 HOH 157 457 457 HOH TIP A . C 3 HOH 158 458 458 HOH TIP A . C 3 HOH 159 459 459 HOH TIP A . C 3 HOH 160 460 460 HOH TIP A . C 3 HOH 161 461 461 HOH TIP A . C 3 HOH 162 462 462 HOH TIP A . C 3 HOH 163 463 463 HOH TIP A . C 3 HOH 164 464 464 HOH TIP A . C 3 HOH 165 465 465 HOH TIP A . C 3 HOH 166 466 466 HOH TIP A . C 3 HOH 167 467 467 HOH TIP A . C 3 HOH 168 468 468 HOH TIP A . C 3 HOH 169 469 469 HOH TIP A . C 3 HOH 170 470 470 HOH TIP A . C 3 HOH 171 471 471 HOH TIP A . C 3 HOH 172 472 472 HOH TIP A . C 3 HOH 173 473 473 HOH TIP A . C 3 HOH 174 474 474 HOH TIP A . C 3 HOH 175 475 475 HOH TIP A . C 3 HOH 176 476 476 HOH TIP A . C 3 HOH 177 477 477 HOH TIP A . C 3 HOH 178 478 478 HOH TIP A . C 3 HOH 179 479 479 HOH TIP A . C 3 HOH 180 480 480 HOH TIP A . C 3 HOH 181 481 481 HOH TIP A . C 3 HOH 182 482 482 HOH TIP A . C 3 HOH 183 483 483 HOH TIP A . C 3 HOH 184 484 484 HOH TIP A . C 3 HOH 185 485 485 HOH TIP A . C 3 HOH 186 486 486 HOH TIP A . C 3 HOH 187 487 487 HOH TIP A . C 3 HOH 188 488 488 HOH TIP A . C 3 HOH 189 489 489 HOH TIP A . C 3 HOH 190 490 490 HOH TIP A . C 3 HOH 191 491 491 HOH TIP A . C 3 HOH 192 492 492 HOH TIP A . C 3 HOH 193 493 493 HOH TIP A . C 3 HOH 194 494 494 HOH TIP A . C 3 HOH 195 495 495 HOH TIP A . C 3 HOH 196 496 496 HOH TIP A . C 3 HOH 197 497 497 HOH TIP A . C 3 HOH 198 498 498 HOH TIP A . C 3 HOH 199 499 499 HOH TIP A . C 3 HOH 200 500 500 HOH TIP A . C 3 HOH 201 501 501 HOH TIP A . C 3 HOH 202 502 502 HOH TIP A . C 3 HOH 203 503 503 HOH TIP A . C 3 HOH 204 504 504 HOH TIP A . C 3 HOH 205 505 505 HOH TIP A . C 3 HOH 206 506 506 HOH TIP A . C 3 HOH 207 507 507 HOH TIP A . C 3 HOH 208 508 508 HOH TIP A . C 3 HOH 209 509 509 HOH TIP A . C 3 HOH 210 510 510 HOH TIP A . C 3 HOH 211 511 511 HOH TIP A . C 3 HOH 212 512 512 HOH TIP A . C 3 HOH 213 513 513 HOH TIP A . C 3 HOH 214 514 514 HOH TIP A . C 3 HOH 215 515 515 HOH TIP A . C 3 HOH 216 516 516 HOH TIP A . C 3 HOH 217 517 517 HOH TIP A . C 3 HOH 218 518 518 HOH TIP A . C 3 HOH 219 519 519 HOH TIP A . C 3 HOH 220 520 520 HOH TIP A . C 3 HOH 221 521 521 HOH TIP A . C 3 HOH 222 522 522 HOH TIP A . C 3 HOH 223 523 523 HOH TIP A . C 3 HOH 224 524 524 HOH TIP A . C 3 HOH 225 525 525 HOH TIP A . C 3 HOH 226 526 526 HOH TIP A . C 3 HOH 227 527 527 HOH TIP A . C 3 HOH 228 528 528 HOH TIP A . C 3 HOH 229 529 529 HOH TIP A . C 3 HOH 230 530 530 HOH TIP A . C 3 HOH 231 531 531 HOH TIP A . C 3 HOH 232 532 532 HOH TIP A . C 3 HOH 233 533 533 HOH TIP A . C 3 HOH 234 534 534 HOH TIP A . C 3 HOH 235 535 535 HOH TIP A . #