HEADER METAL TRANSPORT 29-OCT-01 1K9C TITLE SOLUTION STRUCTURE OF CALRETICULIN P-DOMAIN SUBDOMAIN (RESIDUES 189- TITLE 2 261) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALRETICULIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: P-DOMAIN, RESIDUES 189-261; COMPND 5 SYNONYM: CRP55; CALREGULIN; HACBP; ERP60; CALBP; CALCIUM-BINDING COMPND 6 PROTEIN 3; CABP3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HAIRPIN, METAL TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.ELLGAARD,P.BETTENDORFF,D.BRAUN,T.HERRMANN,F.FIORITO,P.GUNTERT, AUTHOR 2 A.HELENIUS,K.WUTHRICH REVDAT 3 23-FEB-22 1K9C 1 REMARK SEQADV REVDAT 2 24-FEB-09 1K9C 1 VERSN REVDAT 1 12-OCT-02 1K9C 0 JRNL AUTH L.ELLGAARD,P.BETTENDORFF,D.BRAUN,T.HERRMANN,F.FIORITO, JRNL AUTH 2 I.JELESAROV,P.GUNTERT,A.HELENIUS,K.WUTHRICH JRNL TITL NMR STRUCTURES OF 36 AND 73-RESIDUE FRAGMENTS OF THE JRNL TITL 2 CALRETICULIN P-DOMAIN JRNL REF J.MOL.BIOL. V. 322 773 2002 JRNL REFN ISSN 0022-2836 JRNL PMID 12270713 JRNL DOI 10.1016/S0022-2836(02)00812-4 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, DYANA 1.68 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1K9C COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-01. REMARK 100 THE DEPOSITION ID IS D_1000014722. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293.4 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 10 MM CACL2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 3 MM CALRETICULIN P-DOMAIN REMARK 210 SUBDOMAIN; 10 MM CACL2; 95% H20; REMARK 210 5% D20 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; REMARK 210 3D_COMBINED 13C/15N-SEPARATED REMARK 210 NOESY; 3D HNCACB; 3D CBCA(CO)NH; REMARK 210 3D CT-HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 1.68 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 195 -73.40 54.81 REMARK 500 1 ALA A 197 176.95 67.80 REMARK 500 1 PRO A 199 65.41 -68.97 REMARK 500 1 GLU A 200 -44.62 -155.60 REMARK 500 1 ASP A 201 60.18 -154.05 REMARK 500 1 TRP A 202 -51.56 -123.61 REMARK 500 1 ASP A 203 74.05 43.25 REMARK 500 1 ALA A 206 111.46 65.46 REMARK 500 1 ILE A 208 -125.52 -132.30 REMARK 500 1 ASP A 209 -142.93 54.36 REMARK 500 1 SER A 214 62.91 -159.19 REMARK 500 1 LYS A 215 139.60 78.88 REMARK 500 1 LYS A 231 34.63 -158.56 REMARK 500 1 LYS A 232 119.01 63.03 REMARK 500 1 TYR A 254 92.29 22.06 REMARK 500 2 LYS A 189 156.34 77.31 REMARK 500 2 LYS A 190 -169.58 -78.63 REMARK 500 2 PRO A 194 -83.35 -68.30 REMARK 500 2 ALA A 196 8.67 52.26 REMARK 500 2 LYS A 198 73.27 -109.92 REMARK 500 2 PRO A 199 80.28 -65.81 REMARK 500 2 GLU A 200 -47.12 -155.51 REMARK 500 2 ASP A 203 28.03 49.94 REMARK 500 2 GLU A 204 10.58 59.39 REMARK 500 2 LYS A 207 32.43 -144.73 REMARK 500 2 ILE A 208 -89.98 -42.17 REMARK 500 2 ASP A 209 73.05 33.12 REMARK 500 2 THR A 212 24.53 -141.96 REMARK 500 2 SER A 214 85.25 -160.07 REMARK 500 2 LYS A 215 93.84 64.07 REMARK 500 2 GLU A 217 0.30 -64.66 REMARK 500 2 ASP A 220 89.70 -68.90 REMARK 500 2 ASP A 227 103.32 -54.54 REMARK 500 2 LYS A 231 34.04 -157.64 REMARK 500 2 LYS A 232 118.10 64.24 REMARK 500 2 PRO A 252 44.44 -74.25 REMARK 500 2 GLU A 253 -74.87 -165.33 REMARK 500 2 TYR A 254 12.62 50.19 REMARK 500 2 LYS A 255 77.94 34.81 REMARK 500 2 PRO A 260 48.31 -80.93 REMARK 500 3 LYS A 192 -163.12 68.34 REMARK 500 3 ASP A 195 87.03 -67.82 REMARK 500 3 LYS A 198 77.85 -114.87 REMARK 500 3 GLU A 200 -52.06 -156.69 REMARK 500 3 ASP A 201 29.02 -145.08 REMARK 500 3 GLU A 204 17.42 50.71 REMARK 500 3 ARG A 205 26.54 86.40 REMARK 500 3 ASP A 209 74.17 32.92 REMARK 500 3 PRO A 211 -78.77 -74.40 REMARK 500 3 LYS A 215 108.76 82.93 REMARK 500 REMARK 500 THIS ENTRY HAS 359 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 210 PRO A 211 2 -148.76 REMARK 500 PRO A 194 ASP A 195 4 -144.60 REMARK 500 GLU A 200 ASP A 201 4 -149.64 REMARK 500 PRO A 222 GLU A 223 6 -144.37 REMARK 500 LYS A 255 GLY A 256 6 -144.69 REMARK 500 GLY A 256 GLU A 257 6 -147.69 REMARK 500 LYS A 189 LYS A 190 9 -138.99 REMARK 500 SER A 188 LYS A 189 10 147.52 REMARK 500 LYS A 192 ASP A 193 10 -141.32 REMARK 500 GLU A 200 ASP A 201 10 -148.84 REMARK 500 GLU A 234 ASP A 235 10 138.09 REMARK 500 GLU A 200 ASP A 201 13 -144.07 REMARK 500 LYS A 255 GLY A 256 14 -128.54 REMARK 500 THR A 212 ASP A 213 17 -146.26 REMARK 500 GLU A 253 TYR A 254 19 -145.28 REMARK 500 GLU A 200 ASP A 201 20 -133.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 ARG A 261 0.16 SIDE CHAIN REMARK 500 7 ARG A 261 0.17 SIDE CHAIN REMARK 500 8 ARG A 205 0.11 SIDE CHAIN REMARK 500 11 ARG A 205 0.10 SIDE CHAIN REMARK 500 15 TYR A 254 0.08 SIDE CHAIN REMARK 500 16 ARG A 205 0.09 SIDE CHAIN REMARK 500 20 TYR A 254 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HHN RELATED DB: PDB REMARK 900 CALRETICULIN P-DOMAIN REMARK 900 RELATED ID: 1K91 RELATED DB: PDB REMARK 900 CALRETICULIN P-DOMAIN (RESIDUES 221-256) DBREF 1K9C A 189 261 UNP P18418 CRTC_RAT 206 278 SEQADV 1K9C SER A 188 UNP P18418 CLONING ARTIFACT SEQRES 1 A 74 SER LYS LYS ILE LYS ASP PRO ASP ALA ALA LYS PRO GLU SEQRES 2 A 74 ASP TRP ASP GLU ARG ALA LYS ILE ASP ASP PRO THR ASP SEQRES 3 A 74 SER LYS PRO GLU ASP TRP ASP LYS PRO GLU HIS ILE PRO SEQRES 4 A 74 ASP PRO ASP ALA LYS LYS PRO GLU ASP TRP ASP GLU GLU SEQRES 5 A 74 MET ASP GLY GLU TRP GLU PRO PRO VAL ILE GLN ASN PRO SEQRES 6 A 74 GLU TYR LYS GLY GLU TRP LYS PRO ARG SHEET 1 A 2 HIS A 224 PRO A 226 0 SHEET 2 A 2 VAL A 248 GLN A 250 -1 O ILE A 249 N ILE A 225 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1