data_1KDH # _entry.id 1KDH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KDH pdb_00001kdh 10.2210/pdb1kdh/pdb NDB PD0275 ? ? RCSB RCSB014837 ? ? WWPDB D_1000014837 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1JMS 'Unliganded murine terminal deoxynucleotidyl transferase' unspecified PDB 1BPY 'Ternary complex of human polymerase beta' unspecified PDB 1KEJ 'TdT complexed with ddATP' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KDH _pdbx_database_status.recvd_initial_deposition_date 2001-11-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Delarue, M.' 1 'Boule, J.B.' 2 'Lescar, J.' 3 'Expert-Bezancon, N.' 4 'Jourdan, N.' 5 'Sukumar, N.' 6 'Rougeon, F.' 7 'Papanicolaou, C.' 8 # _citation.id primary _citation.title 'Crystal structures of a template-independent DNA polymerase: murine terminal deoxynucleotidyltransferase.' _citation.journal_abbrev 'EMBO J.' _citation.journal_volume 21 _citation.page_first 427 _citation.page_last 439 _citation.year 2002 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11823435 _citation.pdbx_database_id_DOI 10.1093/emboj/21.3.427 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Delarue, M.' 1 ? primary 'Boule, J.B.' 2 ? primary 'Lescar, J.' 3 ? primary 'Expert-Bezancon, N.' 4 ? primary 'Jourdan, N.' 5 ? primary 'Sukumar, N.' 6 ? primary 'Rougeon, F.' 7 ? primary 'Papanicolaou, C.' 8 ? # _cell.entry_id 1KDH _cell.length_a 46.800 _cell.length_b 85.000 _cell.length_c 111.400 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KDH _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(P*(BRU)P*(BRU)P*(BRU)P*(BRU))-3'" 1431.294 1 ? ? ? ? 2 polymer man 'Terminal deoxynucleotidyltransferase short isoform' 41915.836 1 2.7.7.31 ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(BRU)(BRU)(BRU)(BRU)' UUUU D ? 2 'polypeptide(L)' no no ;KKISQYACQRRTTLNNYNQLFTDALDILAENDELRENEGSCLAFMRASSVLKSLPFPITSMKDTEGIPCLGDKVKSIIEG IIEDGESSEAKAVLNDERYKSFKLFTSVFGVGLKTAEKWFRMGFRTLSKIQSDKSLRFTQMQKAGFLYYEDLVSCVNRPE AEAVSMLVKEAVVTFLPDALVTMTGGFRRGKMTGHDVDFLITSPEATEDEEQQLLHKVTDFWKQQGLLLYCDILESTFEK FKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDRRAFALLGWTGSRQFERDLRRYATHE RKMMLDNHALYDRTKRVFLEAESEEEIFAHLGLDYIEPWERNA ; ;KKISQYACQRRTTLNNYNQLFTDALDILAENDELRENEGSCLAFMRASSVLKSLPFPITSMKDTEGIPCLGDKVKSIIEG IIEDGESSEAKAVLNDERYKSFKLFTSVFGVGLKTAEKWFRMGFRTLSKIQSDKSLRFTQMQKAGFLYYEDLVSCVNRPE AEAVSMLVKEAVVTFLPDALVTMTGGFRRGKMTGHDVDFLITSPEATEDEEQQLLHKVTDFWKQQGLLLYCDILESTFEK FKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDRRAFALLGWTGSRQFERDLRRYATHE RKMMLDNHALYDRTKRVFLEAESEEEIFAHLGLDYIEPWERNA ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 BRU n 1 2 BRU n 1 3 BRU n 1 4 BRU n 2 1 LYS n 2 2 LYS n 2 3 ILE n 2 4 SER n 2 5 GLN n 2 6 TYR n 2 7 ALA n 2 8 CYS n 2 9 GLN n 2 10 ARG n 2 11 ARG n 2 12 THR n 2 13 THR n 2 14 LEU n 2 15 ASN n 2 16 ASN n 2 17 TYR n 2 18 ASN n 2 19 GLN n 2 20 LEU n 2 21 PHE n 2 22 THR n 2 23 ASP n 2 24 ALA n 2 25 LEU n 2 26 ASP n 2 27 ILE n 2 28 LEU n 2 29 ALA n 2 30 GLU n 2 31 ASN n 2 32 ASP n 2 33 GLU n 2 34 LEU n 2 35 ARG n 2 36 GLU n 2 37 ASN n 2 38 GLU n 2 39 GLY n 2 40 SER n 2 41 CYS n 2 42 LEU n 2 43 ALA n 2 44 PHE n 2 45 MET n 2 46 ARG n 2 47 ALA n 2 48 SER n 2 49 SER n 2 50 VAL n 2 51 LEU n 2 52 LYS n 2 53 SER n 2 54 LEU n 2 55 PRO n 2 56 PHE n 2 57 PRO n 2 58 ILE n 2 59 THR n 2 60 SER n 2 61 MET n 2 62 LYS n 2 63 ASP n 2 64 THR n 2 65 GLU n 2 66 GLY n 2 67 ILE n 2 68 PRO n 2 69 CYS n 2 70 LEU n 2 71 GLY n 2 72 ASP n 2 73 LYS n 2 74 VAL n 2 75 LYS n 2 76 SER n 2 77 ILE n 2 78 ILE n 2 79 GLU n 2 80 GLY n 2 81 ILE n 2 82 ILE n 2 83 GLU n 2 84 ASP n 2 85 GLY n 2 86 GLU n 2 87 SER n 2 88 SER n 2 89 GLU n 2 90 ALA n 2 91 LYS n 2 92 ALA n 2 93 VAL n 2 94 LEU n 2 95 ASN n 2 96 ASP n 2 97 GLU n 2 98 ARG n 2 99 TYR n 2 100 LYS n 2 101 SER n 2 102 PHE n 2 103 LYS n 2 104 LEU n 2 105 PHE n 2 106 THR n 2 107 SER n 2 108 VAL n 2 109 PHE n 2 110 GLY n 2 111 VAL n 2 112 GLY n 2 113 LEU n 2 114 LYS n 2 115 THR n 2 116 ALA n 2 117 GLU n 2 118 LYS n 2 119 TRP n 2 120 PHE n 2 121 ARG n 2 122 MET n 2 123 GLY n 2 124 PHE n 2 125 ARG n 2 126 THR n 2 127 LEU n 2 128 SER n 2 129 LYS n 2 130 ILE n 2 131 GLN n 2 132 SER n 2 133 ASP n 2 134 LYS n 2 135 SER n 2 136 LEU n 2 137 ARG n 2 138 PHE n 2 139 THR n 2 140 GLN n 2 141 MET n 2 142 GLN n 2 143 LYS n 2 144 ALA n 2 145 GLY n 2 146 PHE n 2 147 LEU n 2 148 TYR n 2 149 TYR n 2 150 GLU n 2 151 ASP n 2 152 LEU n 2 153 VAL n 2 154 SER n 2 155 CYS n 2 156 VAL n 2 157 ASN n 2 158 ARG n 2 159 PRO n 2 160 GLU n 2 161 ALA n 2 162 GLU n 2 163 ALA n 2 164 VAL n 2 165 SER n 2 166 MET n 2 167 LEU n 2 168 VAL n 2 169 LYS n 2 170 GLU n 2 171 ALA n 2 172 VAL n 2 173 VAL n 2 174 THR n 2 175 PHE n 2 176 LEU n 2 177 PRO n 2 178 ASP n 2 179 ALA n 2 180 LEU n 2 181 VAL n 2 182 THR n 2 183 MET n 2 184 THR n 2 185 GLY n 2 186 GLY n 2 187 PHE n 2 188 ARG n 2 189 ARG n 2 190 GLY n 2 191 LYS n 2 192 MET n 2 193 THR n 2 194 GLY n 2 195 HIS n 2 196 ASP n 2 197 VAL n 2 198 ASP n 2 199 PHE n 2 200 LEU n 2 201 ILE n 2 202 THR n 2 203 SER n 2 204 PRO n 2 205 GLU n 2 206 ALA n 2 207 THR n 2 208 GLU n 2 209 ASP n 2 210 GLU n 2 211 GLU n 2 212 GLN n 2 213 GLN n 2 214 LEU n 2 215 LEU n 2 216 HIS n 2 217 LYS n 2 218 VAL n 2 219 THR n 2 220 ASP n 2 221 PHE n 2 222 TRP n 2 223 LYS n 2 224 GLN n 2 225 GLN n 2 226 GLY n 2 227 LEU n 2 228 LEU n 2 229 LEU n 2 230 TYR n 2 231 CYS n 2 232 ASP n 2 233 ILE n 2 234 LEU n 2 235 GLU n 2 236 SER n 2 237 THR n 2 238 PHE n 2 239 GLU n 2 240 LYS n 2 241 PHE n 2 242 LYS n 2 243 GLN n 2 244 PRO n 2 245 SER n 2 246 ARG n 2 247 LYS n 2 248 VAL n 2 249 ASP n 2 250 ALA n 2 251 LEU n 2 252 ASP n 2 253 HIS n 2 254 PHE n 2 255 GLN n 2 256 LYS n 2 257 CYS n 2 258 PHE n 2 259 LEU n 2 260 ILE n 2 261 LEU n 2 262 LYS n 2 263 LEU n 2 264 ASP n 2 265 HIS n 2 266 GLY n 2 267 ARG n 2 268 VAL n 2 269 HIS n 2 270 SER n 2 271 GLU n 2 272 LYS n 2 273 SER n 2 274 GLY n 2 275 GLN n 2 276 GLN n 2 277 GLU n 2 278 GLY n 2 279 LYS n 2 280 GLY n 2 281 TRP n 2 282 LYS n 2 283 ALA n 2 284 ILE n 2 285 ARG n 2 286 VAL n 2 287 ASP n 2 288 LEU n 2 289 VAL n 2 290 MET n 2 291 CYS n 2 292 PRO n 2 293 TYR n 2 294 ASP n 2 295 ARG n 2 296 ARG n 2 297 ALA n 2 298 PHE n 2 299 ALA n 2 300 LEU n 2 301 LEU n 2 302 GLY n 2 303 TRP n 2 304 THR n 2 305 GLY n 2 306 SER n 2 307 ARG n 2 308 GLN n 2 309 PHE n 2 310 GLU n 2 311 ARG n 2 312 ASP n 2 313 LEU n 2 314 ARG n 2 315 ARG n 2 316 TYR n 2 317 ALA n 2 318 THR n 2 319 HIS n 2 320 GLU n 2 321 ARG n 2 322 LYS n 2 323 MET n 2 324 MET n 2 325 LEU n 2 326 ASP n 2 327 ASN n 2 328 HIS n 2 329 ALA n 2 330 LEU n 2 331 TYR n 2 332 ASP n 2 333 ARG n 2 334 THR n 2 335 LYS n 2 336 ARG n 2 337 VAL n 2 338 PHE n 2 339 LEU n 2 340 GLU n 2 341 ALA n 2 342 GLU n 2 343 SER n 2 344 GLU n 2 345 GLU n 2 346 GLU n 2 347 ILE n 2 348 PHE n 2 349 ALA n 2 350 HIS n 2 351 LEU n 2 352 GLY n 2 353 LEU n 2 354 ASP n 2 355 TYR n 2 356 ILE n 2 357 GLU n 2 358 PRO n 2 359 TRP n 2 360 GLU n 2 361 ARG n 2 362 ASN n 2 363 ALA n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 GB AAK07885 2 ;KKISQYACQRRTTLNNYNQLFTDALDILAENDELRENEGSCLAFMRASSVLKSLPFPITSMKDTEGIPCLGDKVKSIIEG IIEDGESSEAKAVLNDERYKSFKLFTSVFGVGLKTAEKWFRMGFRTLSKIQSDKSLRFTQMQKAGFLYYEDLVSCVNRPE AEAVSMLVKEAVVTFLPDALVTMTGGFRRGKMTGHDVDFLITSPEATEDEEQQLLHKVTDFWKQQGLLLYCDILESTFEK FKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDRRAFALLGWTGSRQFERDLRRYATHE RKMMLDNHALYDRTKRVFLEAESEEEIFAHLGLDYIEPWERNA ; 148 12802443 ? 2 PDB 1KDH 1 ? ? 1KDH ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1KDH A 1 ? 363 ? 12802443 148 ? 510 ? 148 510 2 2 1KDH D 1 ? 4 ? 1KDH 1 ? 4 ? 1 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1KDH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_percent_sol 52.14 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'PEG 6K, 1M LiCl, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 6K' ? ? ? 1 2 1 LiCl ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 1999-09-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator DIAMOND _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.960 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.960 # _reflns.entry_id 1KDH _reflns.observed_criterion_sigma_I 0. _reflns.observed_criterion_sigma_F 0. _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 3.00 _reflns.number_obs 8579 _reflns.number_all 8579 _reflns.percent_possible_obs 91.5 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value 0.075 _reflns.pdbx_netI_over_sigmaI 8.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.8 _reflns.R_free_details ? _reflns.limit_k_min ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 87.4 _reflns_shell.Rmerge_I_obs 0.608 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 1.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1KDH _refine.ls_number_reflns_obs 8579 _refine.ls_number_reflns_all 8579 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 30.0 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 91.5 _refine.ls_R_factor_obs 0.241 _refine.ls_R_factor_all 0.241 _refine.ls_R_factor_R_work 0.239 _refine.ls_R_factor_R_free 0.297 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 405 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 4.218 _refine.aniso_B[2][2] 12.747 _refine.aniso_B[3][3] -16.94 _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb entry 1jms' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2846 _refine_hist.pdbx_number_atoms_nucleic_acid 77 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 2930 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it 1.437 1.5 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.579 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.874 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.107 2.5 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.38 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.0084 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param ? 'X-RAY DIFFRACTION' 2 cis_peptide.param ? 'X-RAY DIFFRACTION' 3 water_rep.param ? 'X-RAY DIFFRACTION' 4 dna-rna.param ? 'X-RAY DIFFRACTION' 5 ion.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 1KDH _struct.title 'Binary Complex of Murine Terminal Deoxynucleotidyl Transferase with a Primer Single Stranded DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KDH _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'polymerase, nucleotidyl transferase, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR B 6 ? ARG B 10 ? TYR A 153 ARG A 157 5 ? 5 HELX_P HELX_P2 2 ASN B 18 ? ARG B 35 ? ASN A 165 ARG A 182 1 ? 18 HELX_P HELX_P3 3 ASN B 37 ? SER B 53 ? ASN A 184 SER A 200 1 ? 17 HELX_P HELX_P4 4 SER B 60 ? GLU B 65 ? SER A 207 GLU A 212 5 ? 6 HELX_P HELX_P5 5 GLY B 71 ? GLY B 85 ? GLY A 218 GLY A 232 1 ? 15 HELX_P HELX_P6 6 SER B 87 ? ASP B 96 ? SER A 234 ASP A 243 1 ? 10 HELX_P HELX_P7 7 ASP B 96 ? SER B 107 ? ASP A 243 SER A 254 1 ? 12 HELX_P HELX_P8 8 GLY B 112 ? MET B 122 ? GLY A 259 MET A 269 1 ? 11 HELX_P HELX_P9 9 THR B 126 ? ASP B 133 ? THR A 273 ASP A 280 1 ? 8 HELX_P HELX_P10 10 THR B 139 ? TYR B 148 ? THR A 286 TYR A 295 1 ? 10 HELX_P HELX_P11 11 TYR B 148 ? SER B 154 ? TYR A 295 SER A 301 1 ? 7 HELX_P HELX_P12 12 ASN B 157 ? LEU B 176 ? ASN A 304 LEU A 323 1 ? 20 HELX_P HELX_P13 13 GLY B 186 ? GLY B 190 ? GLY A 333 GLY A 337 5 ? 5 HELX_P HELX_P14 14 THR B 207 ? GLN B 224 ? THR A 354 GLN A 371 1 ? 18 HELX_P HELX_P15 15 GLY B 266 ? VAL B 268 ? GLY A 413 VAL A 415 5 ? 3 HELX_P HELX_P16 16 ARG B 295 ? THR B 304 ? ARG A 442 THR A 451 1 ? 10 HELX_P HELX_P17 17 SER B 306 ? LYS B 322 ? SER A 453 LYS A 469 1 ? 17 HELX_P HELX_P18 18 SER B 343 ? GLY B 352 ? SER A 490 GLY A 499 1 ? 10 HELX_P HELX_P19 19 GLU B 357 ? ARG B 361 ? GLU A 504 ARG A 508 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A BRU 1 "O3'" ? ? ? 1_555 A BRU 2 P ? ? D BRU 1 D BRU 2 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale2 covale both ? A BRU 2 "O3'" ? ? ? 1_555 A BRU 3 P ? ? D BRU 2 D BRU 3 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale3 covale both ? A BRU 3 "O3'" ? ? ? 1_555 A BRU 4 P ? ? D BRU 3 D BRU 4 1_555 ? ? ? ? ? ? ? 1.614 ? ? metalc1 metalc ? ? A BRU 2 OP1 ? ? ? 1_555 D NA . NA ? ? D BRU 2 A NA 2 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc2 metalc ? ? A BRU 3 "O3'" ? ? ? 1_555 C MG . MG ? ? D BRU 3 A MG 1 1_555 ? ? ? ? ? ? ? 2.818 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 B ASP 287 OD2 ? ? A MG 1 A ASP 434 1_555 ? ? ? ? ? ? ? 1.894 ? ? metalc4 metalc ? ? D NA . NA ? ? ? 1_555 B THR 106 O ? ? A NA 2 A THR 253 1_555 ? ? ? ? ? ? ? 2.401 ? ? metalc5 metalc ? ? D NA . NA ? ? ? 1_555 B VAL 108 O ? ? A NA 2 A VAL 255 1_555 ? ? ? ? ? ? ? 3.115 ? ? metalc6 metalc ? ? D NA . NA ? ? ? 1_555 B VAL 111 O ? ? A NA 2 A VAL 258 1_555 ? ? ? ? ? ? ? 2.341 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 305 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 452 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 306 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 453 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.13 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU B 180 ? THR B 184 ? LEU A 327 THR A 331 A 2 ASP B 196 ? SER B 203 ? ASP A 343 SER A 350 A 3 TRP B 281 ? PRO B 292 ? TRP A 428 PRO A 439 A 4 LYS B 256 ? ASP B 264 ? LYS A 403 ASP A 411 A 5 LEU B 228 ? ASP B 232 ? LEU A 375 ASP A 379 B 1 MET B 323 ? LEU B 325 ? MET A 470 LEU A 472 B 2 LEU B 330 ? ASP B 332 ? LEU A 477 ASP A 479 B 3 VAL B 337 ? LEU B 339 ? VAL A 484 LEU A 486 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU B 180 ? N LEU A 327 O THR B 202 ? O THR A 349 A 2 3 N ILE B 201 ? N ILE A 348 O VAL B 289 ? O VAL A 436 A 3 4 O ILE B 284 ? O ILE A 431 N LEU B 261 ? N LEU A 408 A 4 5 O PHE B 258 ? O PHE A 405 N ASP B 232 ? N ASP A 379 B 1 2 N MET B 324 ? N MET A 471 O TYR B 331 ? O TYR A 478 B 2 3 N LEU B 330 ? N LEU A 477 O LEU B 339 ? O LEU A 486 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1 ? 6 'BINDING SITE FOR RESIDUE MG A 1' AC2 Software A NA 2 ? 4 'BINDING SITE FOR RESIDUE NA A 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP B 196 ? ASP A 343 . ? 1_555 ? 2 AC1 6 ASP B 198 ? ASP A 345 . ? 1_555 ? 3 AC1 6 ASP B 287 ? ASP A 434 . ? 1_555 ? 4 AC1 6 TRP B 303 ? TRP A 450 . ? 1_555 ? 5 AC1 6 BRU A 3 ? BRU D 3 . ? 1_555 ? 6 AC1 6 BRU A 4 ? BRU D 4 . ? 1_555 ? 7 AC2 4 THR B 106 ? THR A 253 . ? 1_555 ? 8 AC2 4 VAL B 108 ? VAL A 255 . ? 1_555 ? 9 AC2 4 VAL B 111 ? VAL A 258 . ? 1_555 ? 10 AC2 4 BRU A 2 ? BRU D 2 . ? 1_555 ? # _database_PDB_matrix.entry_id 1KDH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KDH _atom_sites.fract_transf_matrix[1][1] 0.021368 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011765 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008977 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 BRU 1 1 1 BRU +U D . n A 1 2 BRU 2 2 2 BRU +U D . n A 1 3 BRU 3 3 3 BRU +U D . n A 1 4 BRU 4 4 4 BRU +U D . n B 2 1 LYS 1 148 148 LYS LYS A . n B 2 2 LYS 2 149 149 LYS LYS A . n B 2 3 ILE 3 150 150 ILE ILE A . n B 2 4 SER 4 151 151 SER SER A . n B 2 5 GLN 5 152 152 GLN GLN A . n B 2 6 TYR 6 153 153 TYR TYR A . n B 2 7 ALA 7 154 154 ALA ALA A . n B 2 8 CYS 8 155 155 CYS CYS A . n B 2 9 GLN 9 156 156 GLN GLN A . n B 2 10 ARG 10 157 157 ARG ARG A . n B 2 11 ARG 11 158 158 ARG ARG A . n B 2 12 THR 12 159 159 THR THR A . n B 2 13 THR 13 160 160 THR THR A . n B 2 14 LEU 14 161 161 LEU LEU A . n B 2 15 ASN 15 162 162 ASN ASN A . n B 2 16 ASN 16 163 163 ASN ASN A . n B 2 17 TYR 17 164 164 TYR TYR A . n B 2 18 ASN 18 165 165 ASN ASN A . n B 2 19 GLN 19 166 166 GLN GLN A . n B 2 20 LEU 20 167 167 LEU LEU A . n B 2 21 PHE 21 168 168 PHE PHE A . n B 2 22 THR 22 169 169 THR THR A . n B 2 23 ASP 23 170 170 ASP ASP A . n B 2 24 ALA 24 171 171 ALA ALA A . n B 2 25 LEU 25 172 172 LEU LEU A . n B 2 26 ASP 26 173 173 ASP ASP A . n B 2 27 ILE 27 174 174 ILE ILE A . n B 2 28 LEU 28 175 175 LEU LEU A . n B 2 29 ALA 29 176 176 ALA ALA A . n B 2 30 GLU 30 177 177 GLU GLU A . n B 2 31 ASN 31 178 178 ASN ASN A . n B 2 32 ASP 32 179 179 ASP ASP A . n B 2 33 GLU 33 180 180 GLU GLU A . n B 2 34 LEU 34 181 181 LEU LEU A . n B 2 35 ARG 35 182 182 ARG ARG A . n B 2 36 GLU 36 183 183 GLU GLU A . n B 2 37 ASN 37 184 184 ASN ASN A . n B 2 38 GLU 38 185 185 GLU GLU A . n B 2 39 GLY 39 186 186 GLY GLY A . n B 2 40 SER 40 187 187 SER SER A . n B 2 41 CYS 41 188 188 CYS CYS A . n B 2 42 LEU 42 189 189 LEU LEU A . n B 2 43 ALA 43 190 190 ALA ALA A . n B 2 44 PHE 44 191 191 PHE PHE A . n B 2 45 MET 45 192 192 MET MET A . n B 2 46 ARG 46 193 193 ARG ARG A . n B 2 47 ALA 47 194 194 ALA ALA A . n B 2 48 SER 48 195 195 SER SER A . n B 2 49 SER 49 196 196 SER SER A . n B 2 50 VAL 50 197 197 VAL VAL A . n B 2 51 LEU 51 198 198 LEU LEU A . n B 2 52 LYS 52 199 199 LYS LYS A . n B 2 53 SER 53 200 200 SER SER A . n B 2 54 LEU 54 201 201 LEU LEU A . n B 2 55 PRO 55 202 202 PRO PRO A . n B 2 56 PHE 56 203 203 PHE PHE A . n B 2 57 PRO 57 204 204 PRO PRO A . n B 2 58 ILE 58 205 205 ILE ILE A . n B 2 59 THR 59 206 206 THR THR A . n B 2 60 SER 60 207 207 SER SER A . n B 2 61 MET 61 208 208 MET MET A . n B 2 62 LYS 62 209 209 LYS LYS A . n B 2 63 ASP 63 210 210 ASP ASP A . n B 2 64 THR 64 211 211 THR THR A . n B 2 65 GLU 65 212 212 GLU GLU A . n B 2 66 GLY 66 213 213 GLY GLY A . n B 2 67 ILE 67 214 214 ILE ILE A . n B 2 68 PRO 68 215 215 PRO PRO A . n B 2 69 CYS 69 216 216 CYS CYS A . n B 2 70 LEU 70 217 217 LEU LEU A . n B 2 71 GLY 71 218 218 GLY GLY A . n B 2 72 ASP 72 219 219 ASP ASP A . n B 2 73 LYS 73 220 220 LYS LYS A . n B 2 74 VAL 74 221 221 VAL VAL A . n B 2 75 LYS 75 222 222 LYS LYS A . n B 2 76 SER 76 223 223 SER SER A . n B 2 77 ILE 77 224 224 ILE ILE A . n B 2 78 ILE 78 225 225 ILE ILE A . n B 2 79 GLU 79 226 226 GLU GLU A . n B 2 80 GLY 80 227 227 GLY GLY A . n B 2 81 ILE 81 228 228 ILE ILE A . n B 2 82 ILE 82 229 229 ILE ILE A . n B 2 83 GLU 83 230 230 GLU GLU A . n B 2 84 ASP 84 231 231 ASP ASP A . n B 2 85 GLY 85 232 232 GLY GLY A . n B 2 86 GLU 86 233 233 GLU GLU A . n B 2 87 SER 87 234 234 SER SER A . n B 2 88 SER 88 235 235 SER SER A . n B 2 89 GLU 89 236 236 GLU GLU A . n B 2 90 ALA 90 237 237 ALA ALA A . n B 2 91 LYS 91 238 238 LYS LYS A . n B 2 92 ALA 92 239 239 ALA ALA A . n B 2 93 VAL 93 240 240 VAL VAL A . n B 2 94 LEU 94 241 241 LEU LEU A . n B 2 95 ASN 95 242 242 ASN ASN A . n B 2 96 ASP 96 243 243 ASP ASP A . n B 2 97 GLU 97 244 244 GLU GLU A . n B 2 98 ARG 98 245 245 ARG ARG A . n B 2 99 TYR 99 246 246 TYR TYR A . n B 2 100 LYS 100 247 247 LYS LYS A . n B 2 101 SER 101 248 248 SER SER A . n B 2 102 PHE 102 249 249 PHE PHE A . n B 2 103 LYS 103 250 250 LYS LYS A . n B 2 104 LEU 104 251 251 LEU LEU A . n B 2 105 PHE 105 252 252 PHE PHE A . n B 2 106 THR 106 253 253 THR THR A . n B 2 107 SER 107 254 254 SER SER A . n B 2 108 VAL 108 255 255 VAL VAL A . n B 2 109 PHE 109 256 256 PHE PHE A . n B 2 110 GLY 110 257 257 GLY GLY A . n B 2 111 VAL 111 258 258 VAL VAL A . n B 2 112 GLY 112 259 259 GLY GLY A . n B 2 113 LEU 113 260 260 LEU LEU A . n B 2 114 LYS 114 261 261 LYS LYS A . n B 2 115 THR 115 262 262 THR THR A . n B 2 116 ALA 116 263 263 ALA ALA A . n B 2 117 GLU 117 264 264 GLU GLU A . n B 2 118 LYS 118 265 265 LYS LYS A . n B 2 119 TRP 119 266 266 TRP TRP A . n B 2 120 PHE 120 267 267 PHE PHE A . n B 2 121 ARG 121 268 268 ARG ARG A . n B 2 122 MET 122 269 269 MET MET A . n B 2 123 GLY 123 270 270 GLY GLY A . n B 2 124 PHE 124 271 271 PHE PHE A . n B 2 125 ARG 125 272 272 ARG ARG A . n B 2 126 THR 126 273 273 THR THR A . n B 2 127 LEU 127 274 274 LEU LEU A . n B 2 128 SER 128 275 275 SER SER A . n B 2 129 LYS 129 276 276 LYS LYS A . n B 2 130 ILE 130 277 277 ILE ILE A . n B 2 131 GLN 131 278 278 GLN GLN A . n B 2 132 SER 132 279 279 SER SER A . n B 2 133 ASP 133 280 280 ASP ASP A . n B 2 134 LYS 134 281 281 LYS LYS A . n B 2 135 SER 135 282 282 SER SER A . n B 2 136 LEU 136 283 283 LEU LEU A . n B 2 137 ARG 137 284 284 ARG ARG A . n B 2 138 PHE 138 285 285 PHE PHE A . n B 2 139 THR 139 286 286 THR THR A . n B 2 140 GLN 140 287 287 GLN GLN A . n B 2 141 MET 141 288 288 MET MET A . n B 2 142 GLN 142 289 289 GLN GLN A . n B 2 143 LYS 143 290 290 LYS LYS A . n B 2 144 ALA 144 291 291 ALA ALA A . n B 2 145 GLY 145 292 292 GLY GLY A . n B 2 146 PHE 146 293 293 PHE PHE A . n B 2 147 LEU 147 294 294 LEU LEU A . n B 2 148 TYR 148 295 295 TYR TYR A . n B 2 149 TYR 149 296 296 TYR TYR A . n B 2 150 GLU 150 297 297 GLU GLU A . n B 2 151 ASP 151 298 298 ASP ASP A . n B 2 152 LEU 152 299 299 LEU LEU A . n B 2 153 VAL 153 300 300 VAL VAL A . n B 2 154 SER 154 301 301 SER SER A . n B 2 155 CYS 155 302 302 CYS CYS A . n B 2 156 VAL 156 303 303 VAL VAL A . n B 2 157 ASN 157 304 304 ASN ASN A . n B 2 158 ARG 158 305 305 ARG ARG A . n B 2 159 PRO 159 306 306 PRO PRO A . n B 2 160 GLU 160 307 307 GLU GLU A . n B 2 161 ALA 161 308 308 ALA ALA A . n B 2 162 GLU 162 309 309 GLU GLU A . n B 2 163 ALA 163 310 310 ALA ALA A . n B 2 164 VAL 164 311 311 VAL VAL A . n B 2 165 SER 165 312 312 SER SER A . n B 2 166 MET 166 313 313 MET MET A . n B 2 167 LEU 167 314 314 LEU LEU A . n B 2 168 VAL 168 315 315 VAL VAL A . n B 2 169 LYS 169 316 316 LYS LYS A . n B 2 170 GLU 170 317 317 GLU GLU A . n B 2 171 ALA 171 318 318 ALA ALA A . n B 2 172 VAL 172 319 319 VAL VAL A . n B 2 173 VAL 173 320 320 VAL VAL A . n B 2 174 THR 174 321 321 THR THR A . n B 2 175 PHE 175 322 322 PHE PHE A . n B 2 176 LEU 176 323 323 LEU LEU A . n B 2 177 PRO 177 324 324 PRO PRO A . n B 2 178 ASP 178 325 325 ASP ASP A . n B 2 179 ALA 179 326 326 ALA ALA A . n B 2 180 LEU 180 327 327 LEU LEU A . n B 2 181 VAL 181 328 328 VAL VAL A . n B 2 182 THR 182 329 329 THR THR A . n B 2 183 MET 183 330 330 MET MET A . n B 2 184 THR 184 331 331 THR THR A . n B 2 185 GLY 185 332 332 GLY GLY A . n B 2 186 GLY 186 333 333 GLY GLY A . n B 2 187 PHE 187 334 334 PHE PHE A . n B 2 188 ARG 188 335 335 ARG ARG A . n B 2 189 ARG 189 336 336 ARG ARG A . n B 2 190 GLY 190 337 337 GLY GLY A . n B 2 191 LYS 191 338 338 LYS LYS A . n B 2 192 MET 192 339 339 MET MET A . n B 2 193 THR 193 340 340 THR THR A . n B 2 194 GLY 194 341 341 GLY GLY A . n B 2 195 HIS 195 342 342 HIS HIS A . n B 2 196 ASP 196 343 343 ASP ASP A . n B 2 197 VAL 197 344 344 VAL VAL A . n B 2 198 ASP 198 345 345 ASP ASP A . n B 2 199 PHE 199 346 346 PHE PHE A . n B 2 200 LEU 200 347 347 LEU LEU A . n B 2 201 ILE 201 348 348 ILE ILE A . n B 2 202 THR 202 349 349 THR THR A . n B 2 203 SER 203 350 350 SER SER A . n B 2 204 PRO 204 351 351 PRO PRO A . n B 2 205 GLU 205 352 352 GLU GLU A . n B 2 206 ALA 206 353 353 ALA ALA A . n B 2 207 THR 207 354 354 THR THR A . n B 2 208 GLU 208 355 355 GLU GLU A . n B 2 209 ASP 209 356 356 ASP ASP A . n B 2 210 GLU 210 357 357 GLU GLU A . n B 2 211 GLU 211 358 358 GLU GLU A . n B 2 212 GLN 212 359 359 GLN GLN A . n B 2 213 GLN 213 360 360 GLN GLN A . n B 2 214 LEU 214 361 361 LEU LEU A . n B 2 215 LEU 215 362 362 LEU LEU A . n B 2 216 HIS 216 363 363 HIS HIS A . n B 2 217 LYS 217 364 364 LYS LYS A . n B 2 218 VAL 218 365 365 VAL VAL A . n B 2 219 THR 219 366 366 THR THR A . n B 2 220 ASP 220 367 367 ASP ASP A . n B 2 221 PHE 221 368 368 PHE PHE A . n B 2 222 TRP 222 369 369 TRP TRP A . n B 2 223 LYS 223 370 370 LYS LYS A . n B 2 224 GLN 224 371 371 GLN GLN A . n B 2 225 GLN 225 372 372 GLN GLN A . n B 2 226 GLY 226 373 373 GLY GLY A . n B 2 227 LEU 227 374 374 LEU LEU A . n B 2 228 LEU 228 375 375 LEU LEU A . n B 2 229 LEU 229 376 376 LEU LEU A . n B 2 230 TYR 230 377 377 TYR TYR A . n B 2 231 CYS 231 378 378 CYS CYS A . n B 2 232 ASP 232 379 379 ASP ASP A . n B 2 233 ILE 233 380 380 ILE ILE A . n B 2 234 LEU 234 381 381 LEU LEU A . n B 2 235 GLU 235 382 382 GLU GLU A . n B 2 236 SER 236 383 383 SER SER A . n B 2 237 THR 237 384 384 THR THR A . n B 2 238 PHE 238 385 385 PHE PHE A . n B 2 239 GLU 239 386 386 GLU GLU A . n B 2 240 LYS 240 387 387 LYS LYS A . n B 2 241 PHE 241 388 388 PHE PHE A . n B 2 242 LYS 242 389 389 LYS LYS A . n B 2 243 GLN 243 390 390 GLN GLN A . n B 2 244 PRO 244 391 391 PRO PRO A . n B 2 245 SER 245 392 392 SER SER A . n B 2 246 ARG 246 393 393 ARG ARG A . n B 2 247 LYS 247 394 ? ? ? A . n B 2 248 VAL 248 395 ? ? ? A . n B 2 249 ASP 249 396 ? ? ? A . n B 2 250 ALA 250 397 ? ? ? A . n B 2 251 LEU 251 398 398 LEU LEU A . n B 2 252 ASP 252 399 399 ASP ASP A . n B 2 253 HIS 253 400 400 HIS HIS A . n B 2 254 PHE 254 401 401 PHE PHE A . n B 2 255 GLN 255 402 402 GLN GLN A . n B 2 256 LYS 256 403 403 LYS LYS A . n B 2 257 CYS 257 404 404 CYS CYS A . n B 2 258 PHE 258 405 405 PHE PHE A . n B 2 259 LEU 259 406 406 LEU LEU A . n B 2 260 ILE 260 407 407 ILE ILE A . n B 2 261 LEU 261 408 408 LEU LEU A . n B 2 262 LYS 262 409 409 LYS LYS A . n B 2 263 LEU 263 410 410 LEU LEU A . n B 2 264 ASP 264 411 411 ASP ASP A . n B 2 265 HIS 265 412 412 HIS HIS A . n B 2 266 GLY 266 413 413 GLY GLY A . n B 2 267 ARG 267 414 414 ARG ARG A . n B 2 268 VAL 268 415 415 VAL VAL A . n B 2 269 HIS 269 416 416 HIS HIS A . n B 2 270 SER 270 417 417 SER SER A . n B 2 271 GLU 271 418 418 GLU GLU A . n B 2 272 LYS 272 419 419 LYS LYS A . n B 2 273 SER 273 420 420 SER SER A . n B 2 274 GLY 274 421 ? ? ? A . n B 2 275 GLN 275 422 ? ? ? A . n B 2 276 GLN 276 423 ? ? ? A . n B 2 277 GLU 277 424 424 GLU GLU A . n B 2 278 GLY 278 425 425 GLY GLY A . n B 2 279 LYS 279 426 426 LYS LYS A . n B 2 280 GLY 280 427 427 GLY GLY A . n B 2 281 TRP 281 428 428 TRP TRP A . n B 2 282 LYS 282 429 429 LYS LYS A . n B 2 283 ALA 283 430 430 ALA ALA A . n B 2 284 ILE 284 431 431 ILE ILE A . n B 2 285 ARG 285 432 432 ARG ARG A . n B 2 286 VAL 286 433 433 VAL VAL A . n B 2 287 ASP 287 434 434 ASP ASP A . n B 2 288 LEU 288 435 435 LEU LEU A . n B 2 289 VAL 289 436 436 VAL VAL A . n B 2 290 MET 290 437 437 MET MET A . n B 2 291 CYS 291 438 438 CYS CYS A . n B 2 292 PRO 292 439 439 PRO PRO A . n B 2 293 TYR 293 440 440 TYR TYR A . n B 2 294 ASP 294 441 441 ASP ASP A . n B 2 295 ARG 295 442 442 ARG ARG A . n B 2 296 ARG 296 443 443 ARG ARG A . n B 2 297 ALA 297 444 444 ALA ALA A . n B 2 298 PHE 298 445 445 PHE PHE A . n B 2 299 ALA 299 446 446 ALA ALA A . n B 2 300 LEU 300 447 447 LEU LEU A . n B 2 301 LEU 301 448 448 LEU LEU A . n B 2 302 GLY 302 449 449 GLY GLY A . n B 2 303 TRP 303 450 450 TRP TRP A . n B 2 304 THR 304 451 451 THR THR A . n B 2 305 GLY 305 452 452 GLY GLY A . n B 2 306 SER 306 453 453 SER SER A . n B 2 307 ARG 307 454 454 ARG ARG A . n B 2 308 GLN 308 455 455 GLN GLN A . n B 2 309 PHE 309 456 456 PHE PHE A . n B 2 310 GLU 310 457 457 GLU GLU A . n B 2 311 ARG 311 458 458 ARG ARG A . n B 2 312 ASP 312 459 459 ASP ASP A . n B 2 313 LEU 313 460 460 LEU LEU A . n B 2 314 ARG 314 461 461 ARG ARG A . n B 2 315 ARG 315 462 462 ARG ARG A . n B 2 316 TYR 316 463 463 TYR TYR A . n B 2 317 ALA 317 464 464 ALA ALA A . n B 2 318 THR 318 465 465 THR THR A . n B 2 319 HIS 319 466 466 HIS HIS A . n B 2 320 GLU 320 467 467 GLU GLU A . n B 2 321 ARG 321 468 468 ARG ARG A . n B 2 322 LYS 322 469 469 LYS LYS A . n B 2 323 MET 323 470 470 MET MET A . n B 2 324 MET 324 471 471 MET MET A . n B 2 325 LEU 325 472 472 LEU LEU A . n B 2 326 ASP 326 473 473 ASP ASP A . n B 2 327 ASN 327 474 474 ASN ASN A . n B 2 328 HIS 328 475 475 HIS HIS A . n B 2 329 ALA 329 476 476 ALA ALA A . n B 2 330 LEU 330 477 477 LEU LEU A . n B 2 331 TYR 331 478 478 TYR TYR A . n B 2 332 ASP 332 479 479 ASP ASP A . n B 2 333 ARG 333 480 480 ARG ARG A . n B 2 334 THR 334 481 481 THR THR A . n B 2 335 LYS 335 482 482 LYS LYS A . n B 2 336 ARG 336 483 483 ARG ARG A . n B 2 337 VAL 337 484 484 VAL VAL A . n B 2 338 PHE 338 485 485 PHE PHE A . n B 2 339 LEU 339 486 486 LEU LEU A . n B 2 340 GLU 340 487 487 GLU GLU A . n B 2 341 ALA 341 488 488 ALA ALA A . n B 2 342 GLU 342 489 489 GLU GLU A . n B 2 343 SER 343 490 490 SER SER A . n B 2 344 GLU 344 491 491 GLU GLU A . n B 2 345 GLU 345 492 492 GLU GLU A . n B 2 346 GLU 346 493 493 GLU GLU A . n B 2 347 ILE 347 494 494 ILE ILE A . n B 2 348 PHE 348 495 495 PHE PHE A . n B 2 349 ALA 349 496 496 ALA ALA A . n B 2 350 HIS 350 497 497 HIS HIS A . n B 2 351 LEU 351 498 498 LEU LEU A . n B 2 352 GLY 352 499 499 GLY GLY A . n B 2 353 LEU 353 500 500 LEU LEU A . n B 2 354 ASP 354 501 501 ASP ASP A . n B 2 355 TYR 355 502 502 TYR TYR A . n B 2 356 ILE 356 503 503 ILE ILE A . n B 2 357 GLU 357 504 504 GLU GLU A . n B 2 358 PRO 358 505 505 PRO PRO A . n B 2 359 TRP 359 506 506 TRP TRP A . n B 2 360 GLU 360 507 507 GLU GLU A . n B 2 361 ARG 361 508 508 ARG ARG A . n B 2 362 ASN 362 509 509 ASN ASN A . n B 2 363 ALA 363 510 510 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 1 1 MG MG A . D 4 NA 1 2 2 NA NA A . E 5 HOH 1 3 3 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A BRU 1 D BRU 1 ? DU ? 2 A BRU 2 D BRU 2 ? DU ? 3 A BRU 3 D BRU 3 ? DU ? 4 A BRU 4 D BRU 4 ? DU ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A BRU 2 ? D BRU 2 ? 1_555 NA ? D NA . ? A NA 2 ? 1_555 O ? B THR 106 ? A THR 253 ? 1_555 151.3 ? 2 OP1 ? A BRU 2 ? D BRU 2 ? 1_555 NA ? D NA . ? A NA 2 ? 1_555 O ? B VAL 108 ? A VAL 255 ? 1_555 77.3 ? 3 O ? B THR 106 ? A THR 253 ? 1_555 NA ? D NA . ? A NA 2 ? 1_555 O ? B VAL 108 ? A VAL 255 ? 1_555 76.4 ? 4 OP1 ? A BRU 2 ? D BRU 2 ? 1_555 NA ? D NA . ? A NA 2 ? 1_555 O ? B VAL 111 ? A VAL 258 ? 1_555 82.5 ? 5 O ? B THR 106 ? A THR 253 ? 1_555 NA ? D NA . ? A NA 2 ? 1_555 O ? B VAL 111 ? A VAL 258 ? 1_555 86.0 ? 6 O ? B VAL 108 ? A VAL 255 ? 1_555 NA ? D NA . ? A NA 2 ? 1_555 O ? B VAL 111 ? A VAL 258 ? 1_555 89.2 ? 7 "O3'" ? A BRU 3 ? D BRU 3 ? 1_555 MG ? C MG . ? A MG 1 ? 1_555 OD2 ? B ASP 287 ? A ASP 434 ? 1_555 156.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-05-13 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-11-20 5 'Structure model' 1 4 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_conn_angle 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_conn_type 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' struct_conn 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_struct_conn_type.id' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.conn_type_id' 5 5 'Structure model' '_struct_conn.id' 6 5 'Structure model' '_struct_conn.pdbx_dist_value' 7 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 NE1 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 TRP _pdbx_validate_rmsd_bond.auth_seq_id_1 428 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 TRP _pdbx_validate_rmsd_bond.auth_seq_id_2 428 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.484 _pdbx_validate_rmsd_bond.bond_target_value 1.371 _pdbx_validate_rmsd_bond.bond_deviation 0.113 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 201 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 202 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 202 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.68 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.38 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 149 ? ? 50.11 81.94 2 1 SER A 151 ? ? -45.46 156.41 3 1 THR A 160 ? ? -79.90 -157.75 4 1 ASN A 162 ? ? -105.74 72.49 5 1 ASN A 184 ? ? -114.26 74.61 6 1 GLU A 212 ? ? -67.54 67.13 7 1 GLU A 230 ? ? -83.65 -85.57 8 1 SER A 254 ? ? -66.68 0.12 9 1 LYS A 261 ? ? -49.83 -78.99 10 1 ASP A 280 ? ? -43.08 107.78 11 1 SER A 282 ? ? -162.87 -58.66 12 1 LEU A 323 ? ? -157.02 74.50 13 1 PRO A 324 ? ? -57.34 -5.61 14 1 THR A 331 ? ? -109.07 -166.47 15 1 ALA A 353 ? ? -36.54 130.91 16 1 GLN A 359 ? ? -88.04 -74.13 17 1 ASP A 399 ? ? 48.04 76.72 18 1 GLN A 402 ? ? -63.32 99.39 19 1 CYS A 404 ? ? -166.78 104.74 20 1 THR A 465 ? ? -66.78 -73.36 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 148 ? CG ? B LYS 1 CG 2 1 Y 1 A LYS 148 ? CD ? B LYS 1 CD 3 1 Y 1 A LYS 148 ? CE ? B LYS 1 CE 4 1 Y 1 A LYS 148 ? NZ ? B LYS 1 NZ 5 1 Y 1 A LYS 149 ? CG ? B LYS 2 CG 6 1 Y 1 A LYS 149 ? CD ? B LYS 2 CD 7 1 Y 1 A LYS 149 ? CE ? B LYS 2 CE 8 1 Y 1 A LYS 149 ? NZ ? B LYS 2 NZ 9 1 Y 1 A GLU 212 ? CG ? B GLU 65 CG 10 1 Y 1 A GLU 212 ? CD ? B GLU 65 CD 11 1 Y 1 A GLU 212 ? OE1 ? B GLU 65 OE1 12 1 Y 1 A GLU 212 ? OE2 ? B GLU 65 OE2 13 1 Y 1 A LYS 238 ? CG ? B LYS 91 CG 14 1 Y 1 A LYS 238 ? CD ? B LYS 91 CD 15 1 Y 1 A LYS 238 ? CE ? B LYS 91 CE 16 1 Y 1 A LYS 238 ? NZ ? B LYS 91 NZ 17 1 Y 1 A LYS 387 ? CG ? B LYS 240 CG 18 1 Y 1 A LYS 387 ? CD ? B LYS 240 CD 19 1 Y 1 A LYS 387 ? CE ? B LYS 240 CE 20 1 Y 1 A LYS 387 ? NZ ? B LYS 240 NZ 21 1 Y 1 A ARG 393 ? CG ? B ARG 246 CG 22 1 Y 1 A ARG 393 ? CD ? B ARG 246 CD 23 1 Y 1 A ARG 393 ? NE ? B ARG 246 NE 24 1 Y 1 A ARG 393 ? CZ ? B ARG 246 CZ 25 1 Y 1 A ARG 393 ? NH1 ? B ARG 246 NH1 26 1 Y 1 A ARG 393 ? NH2 ? B ARG 246 NH2 27 1 Y 1 A LEU 398 ? CG ? B LEU 251 CG 28 1 Y 1 A LEU 398 ? CD1 ? B LEU 251 CD1 29 1 Y 1 A LEU 398 ? CD2 ? B LEU 251 CD2 30 1 Y 1 A GLU 418 ? CG ? B GLU 271 CG 31 1 Y 1 A GLU 418 ? CD ? B GLU 271 CD 32 1 Y 1 A GLU 418 ? OE1 ? B GLU 271 OE1 33 1 Y 1 A GLU 418 ? OE2 ? B GLU 271 OE2 34 1 Y 1 A LYS 419 ? CG ? B LYS 272 CG 35 1 Y 1 A LYS 419 ? CD ? B LYS 272 CD 36 1 Y 1 A LYS 419 ? CE ? B LYS 272 CE 37 1 Y 1 A LYS 419 ? NZ ? B LYS 272 NZ 38 1 Y 1 A SER 420 ? OG ? B SER 273 OG 39 1 Y 1 A GLU 424 ? CG ? B GLU 277 CG 40 1 Y 1 A GLU 424 ? CD ? B GLU 277 CD 41 1 Y 1 A GLU 424 ? OE1 ? B GLU 277 OE1 42 1 Y 1 A GLU 424 ? OE2 ? B GLU 277 OE2 43 1 Y 1 A LYS 426 ? CG ? B LYS 279 CG 44 1 Y 1 A LYS 426 ? CD ? B LYS 279 CD 45 1 Y 1 A LYS 426 ? CE ? B LYS 279 CE 46 1 Y 1 A LYS 426 ? NZ ? B LYS 279 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 394 ? B LYS 247 2 1 Y 1 A VAL 395 ? B VAL 248 3 1 Y 1 A ASP 396 ? B ASP 249 4 1 Y 1 A ALA 397 ? B ALA 250 5 1 Y 1 A GLY 421 ? B GLY 274 6 1 Y 1 A GLN 422 ? B GLN 275 7 1 Y 1 A GLN 423 ? B GLN 276 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BRU N1 N N N 74 BRU C2 C N N 75 BRU N3 N N N 76 BRU C4 C N N 77 BRU C5 C N N 78 BRU C6 C N N 79 BRU O2 O N N 80 BRU O4 O N N 81 BRU BR BR N N 82 BRU "C1'" C N R 83 BRU "C2'" C N N 84 BRU "C3'" C N S 85 BRU "C4'" C N R 86 BRU "O3'" O N N 87 BRU "O4'" O N N 88 BRU "C5'" C N N 89 BRU "O5'" O N N 90 BRU P P N N 91 BRU OP1 O N N 92 BRU OP2 O N N 93 BRU OP3 O N N 94 BRU HN3 H N N 95 BRU H6 H N N 96 BRU "H1'" H N N 97 BRU "H2'" H N N 98 BRU "H2''" H N N 99 BRU "H3'" H N N 100 BRU "H4'" H N N 101 BRU "HO3'" H N N 102 BRU "H5'" H N N 103 BRU "H5''" H N N 104 BRU HOP2 H N N 105 BRU HOP3 H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 MG MG MG N N 283 NA NA NA N N 284 PHE N N N N 285 PHE CA C N S 286 PHE C C N N 287 PHE O O N N 288 PHE CB C N N 289 PHE CG C Y N 290 PHE CD1 C Y N 291 PHE CD2 C Y N 292 PHE CE1 C Y N 293 PHE CE2 C Y N 294 PHE CZ C Y N 295 PHE OXT O N N 296 PHE H H N N 297 PHE H2 H N N 298 PHE HA H N N 299 PHE HB2 H N N 300 PHE HB3 H N N 301 PHE HD1 H N N 302 PHE HD2 H N N 303 PHE HE1 H N N 304 PHE HE2 H N N 305 PHE HZ H N N 306 PHE HXT H N N 307 PRO N N N N 308 PRO CA C N S 309 PRO C C N N 310 PRO O O N N 311 PRO CB C N N 312 PRO CG C N N 313 PRO CD C N N 314 PRO OXT O N N 315 PRO H H N N 316 PRO HA H N N 317 PRO HB2 H N N 318 PRO HB3 H N N 319 PRO HG2 H N N 320 PRO HG3 H N N 321 PRO HD2 H N N 322 PRO HD3 H N N 323 PRO HXT H N N 324 SER N N N N 325 SER CA C N S 326 SER C C N N 327 SER O O N N 328 SER CB C N N 329 SER OG O N N 330 SER OXT O N N 331 SER H H N N 332 SER H2 H N N 333 SER HA H N N 334 SER HB2 H N N 335 SER HB3 H N N 336 SER HG H N N 337 SER HXT H N N 338 THR N N N N 339 THR CA C N S 340 THR C C N N 341 THR O O N N 342 THR CB C N R 343 THR OG1 O N N 344 THR CG2 C N N 345 THR OXT O N N 346 THR H H N N 347 THR H2 H N N 348 THR HA H N N 349 THR HB H N N 350 THR HG1 H N N 351 THR HG21 H N N 352 THR HG22 H N N 353 THR HG23 H N N 354 THR HXT H N N 355 TRP N N N N 356 TRP CA C N S 357 TRP C C N N 358 TRP O O N N 359 TRP CB C N N 360 TRP CG C Y N 361 TRP CD1 C Y N 362 TRP CD2 C Y N 363 TRP NE1 N Y N 364 TRP CE2 C Y N 365 TRP CE3 C Y N 366 TRP CZ2 C Y N 367 TRP CZ3 C Y N 368 TRP CH2 C Y N 369 TRP OXT O N N 370 TRP H H N N 371 TRP H2 H N N 372 TRP HA H N N 373 TRP HB2 H N N 374 TRP HB3 H N N 375 TRP HD1 H N N 376 TRP HE1 H N N 377 TRP HE3 H N N 378 TRP HZ2 H N N 379 TRP HZ3 H N N 380 TRP HH2 H N N 381 TRP HXT H N N 382 TYR N N N N 383 TYR CA C N S 384 TYR C C N N 385 TYR O O N N 386 TYR CB C N N 387 TYR CG C Y N 388 TYR CD1 C Y N 389 TYR CD2 C Y N 390 TYR CE1 C Y N 391 TYR CE2 C Y N 392 TYR CZ C Y N 393 TYR OH O N N 394 TYR OXT O N N 395 TYR H H N N 396 TYR H2 H N N 397 TYR HA H N N 398 TYR HB2 H N N 399 TYR HB3 H N N 400 TYR HD1 H N N 401 TYR HD2 H N N 402 TYR HE1 H N N 403 TYR HE2 H N N 404 TYR HH H N N 405 TYR HXT H N N 406 VAL N N N N 407 VAL CA C N S 408 VAL C C N N 409 VAL O O N N 410 VAL CB C N N 411 VAL CG1 C N N 412 VAL CG2 C N N 413 VAL OXT O N N 414 VAL H H N N 415 VAL H2 H N N 416 VAL HA H N N 417 VAL HB H N N 418 VAL HG11 H N N 419 VAL HG12 H N N 420 VAL HG13 H N N 421 VAL HG21 H N N 422 VAL HG22 H N N 423 VAL HG23 H N N 424 VAL HXT H N N 425 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BRU N1 C2 sing N N 70 BRU N1 C6 sing N N 71 BRU N1 "C1'" sing N N 72 BRU C2 N3 sing N N 73 BRU C2 O2 doub N N 74 BRU N3 C4 sing N N 75 BRU N3 HN3 sing N N 76 BRU C4 C5 sing N N 77 BRU C4 O4 doub N N 78 BRU C5 C6 doub N N 79 BRU C5 BR sing N N 80 BRU C6 H6 sing N N 81 BRU "C1'" "C2'" sing N N 82 BRU "C1'" "O4'" sing N N 83 BRU "C1'" "H1'" sing N N 84 BRU "C2'" "C3'" sing N N 85 BRU "C2'" "H2'" sing N N 86 BRU "C2'" "H2''" sing N N 87 BRU "C3'" "C4'" sing N N 88 BRU "C3'" "O3'" sing N N 89 BRU "C3'" "H3'" sing N N 90 BRU "C4'" "O4'" sing N N 91 BRU "C4'" "C5'" sing N N 92 BRU "C4'" "H4'" sing N N 93 BRU "O3'" "HO3'" sing N N 94 BRU "C5'" "O5'" sing N N 95 BRU "C5'" "H5'" sing N N 96 BRU "C5'" "H5''" sing N N 97 BRU "O5'" P sing N N 98 BRU P OP1 doub N N 99 BRU P OP2 sing N N 100 BRU P OP3 sing N N 101 BRU OP2 HOP2 sing N N 102 BRU OP3 HOP3 sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 GLN N CA sing N N 117 GLN N H sing N N 118 GLN N H2 sing N N 119 GLN CA C sing N N 120 GLN CA CB sing N N 121 GLN CA HA sing N N 122 GLN C O doub N N 123 GLN C OXT sing N N 124 GLN CB CG sing N N 125 GLN CB HB2 sing N N 126 GLN CB HB3 sing N N 127 GLN CG CD sing N N 128 GLN CG HG2 sing N N 129 GLN CG HG3 sing N N 130 GLN CD OE1 doub N N 131 GLN CD NE2 sing N N 132 GLN NE2 HE21 sing N N 133 GLN NE2 HE22 sing N N 134 GLN OXT HXT sing N N 135 GLU N CA sing N N 136 GLU N H sing N N 137 GLU N H2 sing N N 138 GLU CA C sing N N 139 GLU CA CB sing N N 140 GLU CA HA sing N N 141 GLU C O doub N N 142 GLU C OXT sing N N 143 GLU CB CG sing N N 144 GLU CB HB2 sing N N 145 GLU CB HB3 sing N N 146 GLU CG CD sing N N 147 GLU CG HG2 sing N N 148 GLU CG HG3 sing N N 149 GLU CD OE1 doub N N 150 GLU CD OE2 sing N N 151 GLU OE2 HE2 sing N N 152 GLU OXT HXT sing N N 153 GLY N CA sing N N 154 GLY N H sing N N 155 GLY N H2 sing N N 156 GLY CA C sing N N 157 GLY CA HA2 sing N N 158 GLY CA HA3 sing N N 159 GLY C O doub N N 160 GLY C OXT sing N N 161 GLY OXT HXT sing N N 162 HIS N CA sing N N 163 HIS N H sing N N 164 HIS N H2 sing N N 165 HIS CA C sing N N 166 HIS CA CB sing N N 167 HIS CA HA sing N N 168 HIS C O doub N N 169 HIS C OXT sing N N 170 HIS CB CG sing N N 171 HIS CB HB2 sing N N 172 HIS CB HB3 sing N N 173 HIS CG ND1 sing Y N 174 HIS CG CD2 doub Y N 175 HIS ND1 CE1 doub Y N 176 HIS ND1 HD1 sing N N 177 HIS CD2 NE2 sing Y N 178 HIS CD2 HD2 sing N N 179 HIS CE1 NE2 sing Y N 180 HIS CE1 HE1 sing N N 181 HIS NE2 HE2 sing N N 182 HIS OXT HXT sing N N 183 HOH O H1 sing N N 184 HOH O H2 sing N N 185 ILE N CA sing N N 186 ILE N H sing N N 187 ILE N H2 sing N N 188 ILE CA C sing N N 189 ILE CA CB sing N N 190 ILE CA HA sing N N 191 ILE C O doub N N 192 ILE C OXT sing N N 193 ILE CB CG1 sing N N 194 ILE CB CG2 sing N N 195 ILE CB HB sing N N 196 ILE CG1 CD1 sing N N 197 ILE CG1 HG12 sing N N 198 ILE CG1 HG13 sing N N 199 ILE CG2 HG21 sing N N 200 ILE CG2 HG22 sing N N 201 ILE CG2 HG23 sing N N 202 ILE CD1 HD11 sing N N 203 ILE CD1 HD12 sing N N 204 ILE CD1 HD13 sing N N 205 ILE OXT HXT sing N N 206 LEU N CA sing N N 207 LEU N H sing N N 208 LEU N H2 sing N N 209 LEU CA C sing N N 210 LEU CA CB sing N N 211 LEU CA HA sing N N 212 LEU C O doub N N 213 LEU C OXT sing N N 214 LEU CB CG sing N N 215 LEU CB HB2 sing N N 216 LEU CB HB3 sing N N 217 LEU CG CD1 sing N N 218 LEU CG CD2 sing N N 219 LEU CG HG sing N N 220 LEU CD1 HD11 sing N N 221 LEU CD1 HD12 sing N N 222 LEU CD1 HD13 sing N N 223 LEU CD2 HD21 sing N N 224 LEU CD2 HD22 sing N N 225 LEU CD2 HD23 sing N N 226 LEU OXT HXT sing N N 227 LYS N CA sing N N 228 LYS N H sing N N 229 LYS N H2 sing N N 230 LYS CA C sing N N 231 LYS CA CB sing N N 232 LYS CA HA sing N N 233 LYS C O doub N N 234 LYS C OXT sing N N 235 LYS CB CG sing N N 236 LYS CB HB2 sing N N 237 LYS CB HB3 sing N N 238 LYS CG CD sing N N 239 LYS CG HG2 sing N N 240 LYS CG HG3 sing N N 241 LYS CD CE sing N N 242 LYS CD HD2 sing N N 243 LYS CD HD3 sing N N 244 LYS CE NZ sing N N 245 LYS CE HE2 sing N N 246 LYS CE HE3 sing N N 247 LYS NZ HZ1 sing N N 248 LYS NZ HZ2 sing N N 249 LYS NZ HZ3 sing N N 250 LYS OXT HXT sing N N 251 MET N CA sing N N 252 MET N H sing N N 253 MET N H2 sing N N 254 MET CA C sing N N 255 MET CA CB sing N N 256 MET CA HA sing N N 257 MET C O doub N N 258 MET C OXT sing N N 259 MET CB CG sing N N 260 MET CB HB2 sing N N 261 MET CB HB3 sing N N 262 MET CG SD sing N N 263 MET CG HG2 sing N N 264 MET CG HG3 sing N N 265 MET SD CE sing N N 266 MET CE HE1 sing N N 267 MET CE HE2 sing N N 268 MET CE HE3 sing N N 269 MET OXT HXT sing N N 270 PHE N CA sing N N 271 PHE N H sing N N 272 PHE N H2 sing N N 273 PHE CA C sing N N 274 PHE CA CB sing N N 275 PHE CA HA sing N N 276 PHE C O doub N N 277 PHE C OXT sing N N 278 PHE CB CG sing N N 279 PHE CB HB2 sing N N 280 PHE CB HB3 sing N N 281 PHE CG CD1 doub Y N 282 PHE CG CD2 sing Y N 283 PHE CD1 CE1 sing Y N 284 PHE CD1 HD1 sing N N 285 PHE CD2 CE2 doub Y N 286 PHE CD2 HD2 sing N N 287 PHE CE1 CZ doub Y N 288 PHE CE1 HE1 sing N N 289 PHE CE2 CZ sing Y N 290 PHE CE2 HE2 sing N N 291 PHE CZ HZ sing N N 292 PHE OXT HXT sing N N 293 PRO N CA sing N N 294 PRO N CD sing N N 295 PRO N H sing N N 296 PRO CA C sing N N 297 PRO CA CB sing N N 298 PRO CA HA sing N N 299 PRO C O doub N N 300 PRO C OXT sing N N 301 PRO CB CG sing N N 302 PRO CB HB2 sing N N 303 PRO CB HB3 sing N N 304 PRO CG CD sing N N 305 PRO CG HG2 sing N N 306 PRO CG HG3 sing N N 307 PRO CD HD2 sing N N 308 PRO CD HD3 sing N N 309 PRO OXT HXT sing N N 310 SER N CA sing N N 311 SER N H sing N N 312 SER N H2 sing N N 313 SER CA C sing N N 314 SER CA CB sing N N 315 SER CA HA sing N N 316 SER C O doub N N 317 SER C OXT sing N N 318 SER CB OG sing N N 319 SER CB HB2 sing N N 320 SER CB HB3 sing N N 321 SER OG HG sing N N 322 SER OXT HXT sing N N 323 THR N CA sing N N 324 THR N H sing N N 325 THR N H2 sing N N 326 THR CA C sing N N 327 THR CA CB sing N N 328 THR CA HA sing N N 329 THR C O doub N N 330 THR C OXT sing N N 331 THR CB OG1 sing N N 332 THR CB CG2 sing N N 333 THR CB HB sing N N 334 THR OG1 HG1 sing N N 335 THR CG2 HG21 sing N N 336 THR CG2 HG22 sing N N 337 THR CG2 HG23 sing N N 338 THR OXT HXT sing N N 339 TRP N CA sing N N 340 TRP N H sing N N 341 TRP N H2 sing N N 342 TRP CA C sing N N 343 TRP CA CB sing N N 344 TRP CA HA sing N N 345 TRP C O doub N N 346 TRP C OXT sing N N 347 TRP CB CG sing N N 348 TRP CB HB2 sing N N 349 TRP CB HB3 sing N N 350 TRP CG CD1 doub Y N 351 TRP CG CD2 sing Y N 352 TRP CD1 NE1 sing Y N 353 TRP CD1 HD1 sing N N 354 TRP CD2 CE2 doub Y N 355 TRP CD2 CE3 sing Y N 356 TRP NE1 CE2 sing Y N 357 TRP NE1 HE1 sing N N 358 TRP CE2 CZ2 sing Y N 359 TRP CE3 CZ3 doub Y N 360 TRP CE3 HE3 sing N N 361 TRP CZ2 CH2 doub Y N 362 TRP CZ2 HZ2 sing N N 363 TRP CZ3 CH2 sing Y N 364 TRP CZ3 HZ3 sing N N 365 TRP CH2 HH2 sing N N 366 TRP OXT HXT sing N N 367 TYR N CA sing N N 368 TYR N H sing N N 369 TYR N H2 sing N N 370 TYR CA C sing N N 371 TYR CA CB sing N N 372 TYR CA HA sing N N 373 TYR C O doub N N 374 TYR C OXT sing N N 375 TYR CB CG sing N N 376 TYR CB HB2 sing N N 377 TYR CB HB3 sing N N 378 TYR CG CD1 doub Y N 379 TYR CG CD2 sing Y N 380 TYR CD1 CE1 sing Y N 381 TYR CD1 HD1 sing N N 382 TYR CD2 CE2 doub Y N 383 TYR CD2 HD2 sing N N 384 TYR CE1 CZ doub Y N 385 TYR CE1 HE1 sing N N 386 TYR CE2 CZ sing Y N 387 TYR CE2 HE2 sing N N 388 TYR CZ OH sing N N 389 TYR OH HH sing N N 390 TYR OXT HXT sing N N 391 VAL N CA sing N N 392 VAL N H sing N N 393 VAL N H2 sing N N 394 VAL CA C sing N N 395 VAL CA CB sing N N 396 VAL CA HA sing N N 397 VAL C O doub N N 398 VAL C OXT sing N N 399 VAL CB CG1 sing N N 400 VAL CB CG2 sing N N 401 VAL CB HB sing N N 402 VAL CG1 HG11 sing N N 403 VAL CG1 HG12 sing N N 404 VAL CG1 HG13 sing N N 405 VAL CG2 HG21 sing N N 406 VAL CG2 HG22 sing N N 407 VAL CG2 HG23 sing N N 408 VAL OXT HXT sing N N 409 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 'SODIUM ION' NA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1JMS _pdbx_initial_refinement_model.details 'pdb entry 1jms' #