HEADER TRANSFERASE 16-NOV-01 1KEJ TITLE CRYSTAL STRUCTURE OF MURINE TERMINAL DEOXYNUCLEOTIDYL TRANSFERASE TITLE 2 COMPLEXED WITH DDATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TERMINAL DEOXYNUCLEOTIDYLTRANSFERASE SHORT ISOFORM; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.31; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS POLYMERASE, NUCLEOTIDYL TRANSFERASE, POL X FAMILY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.DELARUE,J.B.BOULE,J.LESCAR,N.EXPERT-BEZANCON,N.JOURDAN,N.SUKUMAR, AUTHOR 2 F.ROUGEON,C.PAPANICOLAOU REVDAT 3 16-AUG-23 1KEJ 1 REMARK LINK REVDAT 2 24-FEB-09 1KEJ 1 VERSN REVDAT 1 16-MAY-02 1KEJ 0 JRNL AUTH M.DELARUE,J.B.BOULE,J.LESCAR,N.EXPERT-BEZANCON,N.JOURDAN, JRNL AUTH 2 N.SUKUMAR,F.ROUGEON,C.PAPANICOLAOU JRNL TITL CRYSTAL STRUCTURES OF A TEMPLATE-INDEPENDENT DNA POLYMERASE: JRNL TITL 2 MURINE TERMINAL DEOXYNUCLEOTIDYLTRANSFERASE. JRNL REF EMBO J. V. 21 427 2002 JRNL REFN ISSN 0261-4189 JRNL PMID 11823435 JRNL DOI 10.1093/EMBOJ/21.3.427 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 7908 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.309 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 770 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2826 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 22.99300 REMARK 3 B22 (A**2) : 27.59100 REMARK 3 B33 (A**2) : -50.58400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.510 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : CIS_PEPTIDE.PARAM REMARK 3 PARAMETER FILE 5 : ATP.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KEJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-01. REMARK 100 THE DEPOSITION ID IS D_1000014870. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.940 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8995 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : 0.07400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : 0.48000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1JMS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6K, 1M LICL, PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.45000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.15000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.65000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.15000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.45000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.65000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 387 REMARK 465 PHE A 388 REMARK 465 LYS A 389 REMARK 465 GLY A 421 REMARK 465 GLN A 422 REMARK 465 GLN A 423 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 GLU A 212 CG CD OE1 OE2 REMARK 470 LYS A 238 CG CD CE NZ REMARK 470 PHE A 385 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 386 CG CD OE1 OE2 REMARK 470 GLN A 390 CG CD OE1 NE2 REMARK 470 SER A 392 OG REMARK 470 ARG A 393 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 394 CG CD CE NZ REMARK 470 VAL A 395 CG1 CG2 REMARK 470 ASP A 396 CG OD1 OD2 REMARK 470 LEU A 398 CG CD1 CD2 REMARK 470 GLU A 418 CG CD OE1 OE2 REMARK 470 LYS A 419 CG CD CE NZ REMARK 470 SER A 420 OG REMARK 470 GLU A 424 CG CD OE1 OE2 REMARK 470 LYS A 426 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 150 -176.59 -65.83 REMARK 500 ASN A 165 29.68 -142.36 REMARK 500 LEU A 167 -70.99 -57.37 REMARK 500 ARG A 182 40.16 -79.32 REMARK 500 GLU A 183 59.67 30.79 REMARK 500 GLU A 185 3.38 -55.00 REMARK 500 THR A 206 -72.28 -107.74 REMARK 500 CYS A 216 13.43 57.38 REMARK 500 GLU A 230 34.96 -91.77 REMARK 500 ASP A 231 -56.81 -164.27 REMARK 500 TYR A 246 -80.13 -54.71 REMARK 500 LYS A 247 -58.50 -23.39 REMARK 500 LYS A 276 41.66 -104.96 REMARK 500 ILE A 277 -60.61 -134.09 REMARK 500 ASP A 280 107.89 -42.68 REMARK 500 SER A 282 -62.53 -139.15 REMARK 500 CYS A 302 -176.49 -67.08 REMARK 500 GLU A 317 -19.42 -47.47 REMARK 500 ALA A 318 -72.01 -93.35 REMARK 500 LEU A 323 87.65 -179.15 REMARK 500 THR A 340 140.34 -173.98 REMARK 500 SER A 350 129.94 -175.18 REMARK 500 ALA A 353 124.20 -170.59 REMARK 500 GLN A 359 30.79 -70.06 REMARK 500 GLN A 360 -23.13 -141.48 REMARK 500 ASP A 379 82.13 -153.08 REMARK 500 PHE A 385 176.11 -57.40 REMARK 500 SER A 392 168.64 -47.21 REMARK 500 ARG A 393 -7.05 -149.54 REMARK 500 VAL A 395 43.68 30.89 REMARK 500 HIS A 416 76.77 -117.57 REMARK 500 LYS A 426 77.15 60.39 REMARK 500 TRP A 428 -169.70 -110.01 REMARK 500 ASP A 441 9.66 -67.53 REMARK 500 THR A 465 -92.63 -62.54 REMARK 500 HIS A 466 -32.16 -31.44 REMARK 500 ARG A 480 -18.56 -48.65 REMARK 500 ARG A 483 51.43 37.23 REMARK 500 TYR A 502 144.04 -38.36 REMARK 500 ARG A 508 46.06 -104.23 REMARK 500 ASN A 509 45.77 -103.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 703 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 253 O REMARK 620 2 VAL A 255 O 63.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 701 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 343 OD1 REMARK 620 2 ASP A 345 OD2 107.0 REMARK 620 3 DAD A 601 O2G 95.3 153.3 REMARK 620 4 DAD A 601 O2B 163.4 86.6 69.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 702 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 343 OD2 REMARK 620 2 ASP A 345 OD1 105.9 REMARK 620 3 ASP A 434 OD1 82.2 80.0 REMARK 620 4 DAD A 601 O1A 90.0 115.6 164.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DAD A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JMS RELATED DB: PDB REMARK 900 TDT NATIVE REMARK 900 RELATED ID: 1KDH RELATED DB: PDB REMARK 900 TDT COMPLEXED WITH A PRIMER STRAND REMARK 900 RELATED ID: 1BPY RELATED DB: PDB REMARK 900 POLYMERASE BETA (CLOSED FORM) DBREF 1KEJ A 148 510 UNP P09838 TDT_MOUSE 148 510 SEQRES 1 A 363 LYS LYS ILE SER GLN TYR ALA CYS GLN ARG ARG THR THR SEQRES 2 A 363 LEU ASN ASN TYR ASN GLN LEU PHE THR ASP ALA LEU ASP SEQRES 3 A 363 ILE LEU ALA GLU ASN ASP GLU LEU ARG GLU ASN GLU GLY SEQRES 4 A 363 SER CYS LEU ALA PHE MET ARG ALA SER SER VAL LEU LYS SEQRES 5 A 363 SER LEU PRO PHE PRO ILE THR SER MET LYS ASP THR GLU SEQRES 6 A 363 GLY ILE PRO CYS LEU GLY ASP LYS VAL LYS SER ILE ILE SEQRES 7 A 363 GLU GLY ILE ILE GLU ASP GLY GLU SER SER GLU ALA LYS SEQRES 8 A 363 ALA VAL LEU ASN ASP GLU ARG TYR LYS SER PHE LYS LEU SEQRES 9 A 363 PHE THR SER VAL PHE GLY VAL GLY LEU LYS THR ALA GLU SEQRES 10 A 363 LYS TRP PHE ARG MET GLY PHE ARG THR LEU SER LYS ILE SEQRES 11 A 363 GLN SER ASP LYS SER LEU ARG PHE THR GLN MET GLN LYS SEQRES 12 A 363 ALA GLY PHE LEU TYR TYR GLU ASP LEU VAL SER CYS VAL SEQRES 13 A 363 ASN ARG PRO GLU ALA GLU ALA VAL SER MET LEU VAL LYS SEQRES 14 A 363 GLU ALA VAL VAL THR PHE LEU PRO ASP ALA LEU VAL THR SEQRES 15 A 363 MET THR GLY GLY PHE ARG ARG GLY LYS MET THR GLY HIS SEQRES 16 A 363 ASP VAL ASP PHE LEU ILE THR SER PRO GLU ALA THR GLU SEQRES 17 A 363 ASP GLU GLU GLN GLN LEU LEU HIS LYS VAL THR ASP PHE SEQRES 18 A 363 TRP LYS GLN GLN GLY LEU LEU LEU TYR CYS ASP ILE LEU SEQRES 19 A 363 GLU SER THR PHE GLU LYS PHE LYS GLN PRO SER ARG LYS SEQRES 20 A 363 VAL ASP ALA LEU ASP HIS PHE GLN LYS CYS PHE LEU ILE SEQRES 21 A 363 LEU LYS LEU ASP HIS GLY ARG VAL HIS SER GLU LYS SER SEQRES 22 A 363 GLY GLN GLN GLU GLY LYS GLY TRP LYS ALA ILE ARG VAL SEQRES 23 A 363 ASP LEU VAL MET CYS PRO TYR ASP ARG ARG ALA PHE ALA SEQRES 24 A 363 LEU LEU GLY TRP THR GLY SER ARG GLN PHE GLU ARG ASP SEQRES 25 A 363 LEU ARG ARG TYR ALA THR HIS GLU ARG LYS MET MET LEU SEQRES 26 A 363 ASP ASN HIS ALA LEU TYR ASP ARG THR LYS ARG VAL PHE SEQRES 27 A 363 LEU GLU ALA GLU SER GLU GLU GLU ILE PHE ALA HIS LEU SEQRES 28 A 363 GLY LEU ASP TYR ILE GLU PRO TRP GLU ARG ASN ALA HET CO A 701 1 HET CO A 702 1 HET NA A 703 1 HET DAD A 601 29 HETNAM CO COBALT (II) ION HETNAM NA SODIUM ION HETNAM DAD 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE FORMUL 2 CO 2(CO 2+) FORMUL 4 NA NA 1+ FORMUL 5 DAD C10 H16 N5 O11 P3 FORMUL 6 HOH *18(H2 O) HELIX 1 1 TYR A 153 ARG A 157 5 5 HELIX 2 2 ASN A 165 ARG A 182 1 18 HELIX 3 3 SER A 187 LEU A 201 1 15 HELIX 4 4 GLY A 218 GLU A 230 1 13 HELIX 5 5 SER A 234 LEU A 241 1 8 HELIX 6 6 ASP A 243 THR A 253 1 11 HELIX 7 7 LYS A 261 GLY A 270 1 10 HELIX 8 8 THR A 273 ILE A 277 5 5 HELIX 9 9 THR A 286 TYR A 295 1 10 HELIX 10 10 TYR A 295 SER A 301 1 7 HELIX 11 11 ARG A 305 VAL A 320 1 16 HELIX 12 12 THR A 321 LEU A 323 5 3 HELIX 13 13 GLY A 332 GLY A 337 5 6 HELIX 14 14 GLU A 357 GLN A 359 5 3 HELIX 15 15 GLN A 360 GLN A 371 1 12 HELIX 16 16 ASP A 411 VAL A 415 5 5 HELIX 17 17 PRO A 439 ASP A 441 5 3 HELIX 18 18 ARG A 442 GLY A 452 1 11 HELIX 19 19 SER A 453 LYS A 469 1 17 HELIX 20 20 SER A 490 GLY A 499 1 10 HELIX 21 21 GLU A 504 ARG A 508 5 5 SHEET 1 A 2 VAL A 303 ASN A 304 0 SHEET 2 A 2 THR A 340 GLY A 341 -1 O GLY A 341 N VAL A 303 SHEET 1 B 5 LEU A 327 THR A 331 0 SHEET 2 B 5 ASP A 345 THR A 349 -1 O THR A 349 N LEU A 327 SHEET 3 B 5 ALA A 430 MET A 437 1 O VAL A 436 N ILE A 348 SHEET 4 B 5 GLN A 402 LYS A 409 -1 N LEU A 408 O ILE A 431 SHEET 5 B 5 LEU A 375 LEU A 381 -1 N LEU A 381 O LYS A 403 SHEET 1 C 2 MET A 470 LEU A 472 0 SHEET 2 C 2 LEU A 477 ASP A 479 -1 O TYR A 478 N MET A 471 LINK O THR A 253 NA NA A 703 1555 1555 3.00 LINK O VAL A 255 NA NA A 703 1555 1555 2.93 LINK OD1 ASP A 343 CO CO A 701 1555 1555 1.73 LINK OD2 ASP A 343 CO CO A 702 1555 1555 2.45 LINK OD2 ASP A 345 CO CO A 701 1555 1555 1.81 LINK OD1 ASP A 345 CO CO A 702 1555 1555 2.42 LINK OD1 ASP A 434 CO CO A 702 1555 1555 2.28 LINK O2G DAD A 601 CO CO A 701 1555 1555 1.74 LINK O2B DAD A 601 CO CO A 701 1555 1555 2.71 LINK O1A DAD A 601 CO CO A 702 1555 1555 2.03 CISPEP 1 GLY A 452 SER A 453 0 -0.20 SITE 1 AC1 4 ASP A 343 ASP A 345 DAD A 601 CO A 702 SITE 1 AC2 5 ASP A 343 ASP A 345 ASP A 434 DAD A 601 SITE 2 AC2 5 CO A 701 SITE 1 AC3 3 THR A 253 VAL A 255 VAL A 258 SITE 1 AC4 10 GLY A 333 ARG A 336 GLY A 341 HIS A 342 SITE 2 AC4 10 ASP A 343 ASP A 345 ALA A 397 ARG A 454 SITE 3 AC4 10 CO A 701 CO A 702 CRYST1 46.900 85.300 108.300 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021322 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011723 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009234 0.00000