data_1KF1 # _entry.id 1KF1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KF1 pdb_00001kf1 10.2210/pdb1kf1/pdb NDB UD0017 ? ? RCSB RCSB014884 ? ? WWPDB D_1000014884 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KF1 _pdbx_database_status.recvd_initial_deposition_date 2001-11-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Parkinson, G.N.' 1 ? 'Lee, M.P.H.' 2 ? 'Neidle, S.' 3 ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI _citation.pdbx_database_id_patent primary 'Crystal structure of parallel quadruplexes from human telomeric DNA.' Nature 417 876 880 2002 NATUAS UK 0028-0836 0006 ? 12050675 10.1038/nature755 ? 1 'Crystal Structure of G-Quadruplex' Patent ? ? ? 2002 ? UK ? ? ? ? ? 0207623.0 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Parkinson, G.N.' 1 ? primary 'Lee, M.P.' 2 ? primary 'Neidle, S.' 3 ? 1 'Parkinson, G.N.' 4 ? 1 'Lee, M.P.H.' 5 ? 1 'Neidle, S.' 6 ? # _cell.entry_id 1KF1 _cell.length_a 56.682 _cell.length_b 56.682 _cell.length_c 42.106 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KF1 _symmetry.space_group_name_H-M 'P 6' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3" 6983.497 1 ? ? ? 'HUMAN TELOMERE REPEAT SEQUENCE' 2 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 3 water nat water 18.015 68 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG) (DG)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can AGGGTTAGGGTTAGGGTTAGGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DT n 1 7 DA n 1 8 DG n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 DT n 1 13 DA n 1 14 DG n 1 15 DG n 1 16 DG n 1 17 DT n 1 18 DT n 1 19 DA n 1 20 DG n 1 21 DG n 1 22 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence occurs naturally in humans' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1KF1 _struct_ref.pdbx_db_accession 1KF1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KF1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1KF1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # _exptl.entry_id 1KF1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_percent_sol 54.40 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 285 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 400, potassium iodide, potassium chloride, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 285K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 KI ? ? ? 1 3 1 KCl ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 103 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-03-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.901 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.901 # _reflns.entry_id 1KF1 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.1 _reflns.number_obs 4304 _reflns.number_all 4495 _reflns.percent_possible_obs 93.8 _reflns.pdbx_Rmerge_I_obs 0.0520000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.17 _reflns_shell.percent_possible_all 97.8 _reflns_shell.Rmerge_I_obs 0.1170000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 15.0 _reflns_shell.pdbx_redundancy 4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 440 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1KF1 _refine.ls_number_reflns_obs 4227 _refine.ls_number_reflns_all 4416 _refine.pdbx_ls_sigma_I 4.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 10 _refine.ls_d_res_high 2.1 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2310000 _refine.ls_R_factor_all 0.2350000 _refine.ls_R_factor_R_work 0.2290000 _refine.ls_R_factor_R_free 0.2630000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 441 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1K8P' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'parkinson et al.' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 465 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 536 _refine_hist.d_res_high 2.1 _refine_hist.d_res_low 10 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_angle_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.003 ? ? ? 'X-RAY DIFFRACTION' ? s_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.007 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.09 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.2960000 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1KF1 _struct.title 'Structure and Packing of Human Telomeric DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KF1 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'QUADRUPLEX DNA, DOUBLE CHAIN REVERSAL LOOP, HUMAN TELOMERE SEQUENCE, G(ANTI).G(ANTI).G(ANTI), PARALLEL STRANDED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 2 O6 ? ? ? 1_555 C K . K ? ? A DG 2 A K 25 1_555 ? ? ? ? ? ? ? 2.738 ? ? metalc2 metalc ? ? A DG 2 O6 ? ? ? 1_555 D K . K ? ? A DG 2 A K 26 1_555 ? ? ? ? ? ? ? 2.828 ? ? metalc3 metalc ? ? A DG 2 O6 ? ? ? 4_655 D K . K ? ? A DG 2 A K 26 1_555 ? ? ? ? ? ? ? 2.828 ? ? metalc4 metalc ? ? A DG 3 O6 ? ? ? 1_555 B K . K ? ? A DG 3 A K 24 1_555 ? ? ? ? ? ? ? 3.178 ? ? metalc5 metalc ? ? A DG 3 O6 ? ? ? 1_555 C K . K ? ? A DG 3 A K 25 1_555 ? ? ? ? ? ? ? 2.657 ? ? metalc6 metalc ? ? A DG 4 O6 ? ? ? 1_555 B K . K ? ? A DG 4 A K 24 1_555 ? ? ? ? ? ? ? 2.594 ? ? metalc7 metalc ? ? A DG 8 O6 ? ? ? 1_555 C K . K ? ? A DG 8 A K 25 1_555 ? ? ? ? ? ? ? 2.785 ? ? metalc8 metalc ? ? A DG 8 O6 ? ? ? 1_555 D K . K ? ? A DG 8 A K 26 1_555 ? ? ? ? ? ? ? 2.814 ? ? metalc9 metalc ? ? A DG 8 O6 ? ? ? 4_655 D K . K ? ? A DG 8 A K 26 1_555 ? ? ? ? ? ? ? 2.814 ? ? metalc10 metalc ? ? A DG 9 O6 ? ? ? 1_555 B K . K ? ? A DG 9 A K 24 1_555 ? ? ? ? ? ? ? 2.904 ? ? metalc11 metalc ? ? A DG 9 O6 ? ? ? 1_555 C K . K ? ? A DG 9 A K 25 1_555 ? ? ? ? ? ? ? 2.684 ? ? metalc12 metalc ? ? A DG 10 O6 ? ? ? 1_555 B K . K ? ? A DG 10 A K 24 1_555 ? ? ? ? ? ? ? 2.434 ? ? metalc13 metalc ? ? A DG 14 O6 ? ? ? 1_555 C K . K ? ? A DG 14 A K 25 1_555 ? ? ? ? ? ? ? 2.777 ? ? metalc14 metalc ? ? A DG 14 O6 ? ? ? 1_555 D K . K ? ? A DG 14 A K 26 1_555 ? ? ? ? ? ? ? 2.803 ? ? metalc15 metalc ? ? A DG 14 O6 ? ? ? 4_655 D K . K ? ? A DG 14 A K 26 1_555 ? ? ? ? ? ? ? 2.803 ? ? metalc16 metalc ? ? A DG 15 O6 ? ? ? 1_555 B K . K ? ? A DG 15 A K 24 1_555 ? ? ? ? ? ? ? 3.011 ? ? metalc17 metalc ? ? A DG 15 O6 ? ? ? 1_555 C K . K ? ? A DG 15 A K 25 1_555 ? ? ? ? ? ? ? 2.735 ? ? metalc18 metalc ? ? A DG 16 O6 ? ? ? 1_555 B K . K ? ? A DG 16 A K 24 1_555 ? ? ? ? ? ? ? 2.612 ? ? metalc19 metalc ? ? A DG 20 O6 ? ? ? 1_555 C K . K ? ? A DG 20 A K 25 1_555 ? ? ? ? ? ? ? 2.858 ? ? metalc20 metalc ? ? A DG 20 O6 ? ? ? 1_555 D K . K ? ? A DG 20 A K 26 1_555 ? ? ? ? ? ? ? 2.620 ? ? metalc21 metalc ? ? A DG 20 O6 ? ? ? 4_655 D K . K ? ? A DG 20 A K 26 1_555 ? ? ? ? ? ? ? 2.620 ? ? metalc22 metalc ? ? A DG 21 O6 ? ? ? 1_555 B K . K ? ? A DG 21 A K 24 1_555 ? ? ? ? ? ? ? 2.917 ? ? metalc23 metalc ? ? A DG 21 O6 ? ? ? 1_555 C K . K ? ? A DG 21 A K 25 1_555 ? ? ? ? ? ? ? 2.787 ? ? metalc24 metalc ? ? A DG 22 O6 ? ? ? 1_555 B K . K ? ? A DG 22 A K 24 1_555 ? ? ? ? ? ? ? 2.629 ? ? metalc25 metalc ? ? B K . K ? ? ? 1_555 C K . K ? ? A K 24 A K 25 1_555 ? ? ? ? ? ? ? 3.507 ? ? metalc26 metalc ? ? C K . K ? ? ? 1_555 D K . K ? ? A K 25 A K 26 1_555 ? ? ? ? ? ? ? 3.307 ? ? metalc27 metalc ? ? C K . K ? ? ? 1_555 D K . K ? ? A K 25 A K 26 4_655 ? ? ? ? ? ? ? 3.307 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 2 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 2 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 20 N2 ? ? A DG 2 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 20 N1 ? ? A DG 2 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 3 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 3 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 4 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 4 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 22 N2 ? ? A DG 4 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 22 N1 ? ? A DG 4 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 8 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 8 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 16 O6 ? ? A DG 10 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 16 N7 ? ? A DG 10 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 20 O6 ? ? A DG 14 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 20 N7 ? ? A DG 14 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 15 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 15 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 16 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 16 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 24 ? 9 'BINDING SITE FOR RESIDUE K A 24' AC2 Software A K 25 ? 11 'BINDING SITE FOR RESIDUE K A 25' AC3 Software A K 26 ? 10 'BINDING SITE FOR RESIDUE K A 26' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DG A 3 ? DG A 3 . ? 1_555 ? 2 AC1 9 DG A 4 ? DG A 4 . ? 1_555 ? 3 AC1 9 DG A 9 ? DG A 9 . ? 1_555 ? 4 AC1 9 DG A 10 ? DG A 10 . ? 1_555 ? 5 AC1 9 DG A 15 ? DG A 15 . ? 1_555 ? 6 AC1 9 DG A 16 ? DG A 16 . ? 1_555 ? 7 AC1 9 DG A 21 ? DG A 21 . ? 1_555 ? 8 AC1 9 DG A 22 ? DG A 22 . ? 1_555 ? 9 AC1 9 K C . ? K A 25 . ? 1_555 ? 10 AC2 11 DG A 2 ? DG A 2 . ? 1_555 ? 11 AC2 11 DG A 3 ? DG A 3 . ? 1_555 ? 12 AC2 11 DG A 8 ? DG A 8 . ? 1_555 ? 13 AC2 11 DG A 9 ? DG A 9 . ? 1_555 ? 14 AC2 11 DG A 14 ? DG A 14 . ? 1_555 ? 15 AC2 11 DG A 15 ? DG A 15 . ? 1_555 ? 16 AC2 11 DG A 20 ? DG A 20 . ? 1_555 ? 17 AC2 11 DG A 21 ? DG A 21 . ? 1_555 ? 18 AC2 11 K B . ? K A 24 . ? 1_555 ? 19 AC2 11 K D . ? K A 26 . ? 4_655 ? 20 AC2 11 K D . ? K A 26 . ? 1_555 ? 21 AC3 10 DG A 2 ? DG A 2 . ? 1_555 ? 22 AC3 10 DG A 2 ? DG A 2 . ? 4_655 ? 23 AC3 10 DG A 8 ? DG A 8 . ? 1_555 ? 24 AC3 10 DG A 8 ? DG A 8 . ? 4_655 ? 25 AC3 10 DG A 14 ? DG A 14 . ? 4_655 ? 26 AC3 10 DG A 14 ? DG A 14 . ? 1_555 ? 27 AC3 10 DG A 20 ? DG A 20 . ? 4_655 ? 28 AC3 10 DG A 20 ? DG A 20 . ? 1_555 ? 29 AC3 10 K C . ? K A 25 . ? 4_655 ? 30 AC3 10 K C . ? K A 25 . ? 1_555 ? # _database_PDB_matrix.entry_id 1KF1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KF1 _atom_sites.fract_transf_matrix[1][1] 0.017642 _atom_sites.fract_transf_matrix[1][2] 0.010186 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020372 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023750 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C K N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DT 6 6 6 DT T A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DG 8 8 8 DG G A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DT 11 11 11 DT T A . n A 1 12 DT 12 12 12 DT T A . n A 1 13 DA 13 13 13 DA A A . n A 1 14 DG 14 14 14 DG G A . n A 1 15 DG 15 15 15 DG G A . n A 1 16 DG 16 16 16 DG G A . n A 1 17 DT 17 17 17 DT T A . n A 1 18 DT 18 18 18 DT T A . n A 1 19 DA 19 19 19 DA A A . n A 1 20 DG 20 20 20 DG G A . n A 1 21 DG 21 21 21 DG G A . n A 1 22 DG 22 22 22 DG G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 24 24 K K A . C 2 K 1 25 25 K K A . D 2 K 1 26 26 K K A . E 3 HOH 1 1001 1001 HOH HOH A . E 3 HOH 2 1002 1002 HOH HOH A . E 3 HOH 3 1003 1003 HOH HOH A . E 3 HOH 4 1004 1004 HOH HOH A . E 3 HOH 5 1005 1005 HOH HOH A . E 3 HOH 6 1006 1006 HOH HOH A . E 3 HOH 7 1007 1007 HOH HOH A . E 3 HOH 8 1008 1008 HOH HOH A . E 3 HOH 9 1009 1009 HOH HOH A . E 3 HOH 10 1010 1010 HOH HOH A . E 3 HOH 11 1011 1011 HOH HOH A . E 3 HOH 12 1012 1012 HOH HOH A . E 3 HOH 13 1013 1013 HOH HOH A . E 3 HOH 14 1014 1014 HOH HOH A . E 3 HOH 15 1015 1015 HOH HOH A . E 3 HOH 16 1016 1016 HOH HOH A . E 3 HOH 17 1017 1017 HOH HOH A . E 3 HOH 18 1018 1018 HOH HOH A . E 3 HOH 19 1019 1019 HOH HOH A . E 3 HOH 20 1020 1020 HOH HOH A . E 3 HOH 21 1021 1021 HOH HOH A . E 3 HOH 22 1022 1022 HOH HOH A . E 3 HOH 23 1023 1023 HOH HOH A . E 3 HOH 24 1024 1024 HOH HOH A . E 3 HOH 25 1025 1025 HOH HOH A . E 3 HOH 26 1026 1026 HOH HOH A . E 3 HOH 27 1027 1027 HOH HOH A . E 3 HOH 28 1028 1028 HOH HOH A . E 3 HOH 29 1029 1029 HOH HOH A . E 3 HOH 30 1030 1030 HOH HOH A . E 3 HOH 31 1031 1031 HOH HOH A . E 3 HOH 32 1032 1032 HOH HOH A . E 3 HOH 33 1033 1033 HOH HOH A . E 3 HOH 34 1034 1034 HOH HOH A . E 3 HOH 35 1035 1035 HOH HOH A . E 3 HOH 36 1036 1036 HOH HOH A . E 3 HOH 37 1037 1037 HOH HOH A . E 3 HOH 38 1038 1038 HOH HOH A . E 3 HOH 39 1039 1039 HOH HOH A . E 3 HOH 40 1040 1040 HOH HOH A . E 3 HOH 41 1041 1041 HOH HOH A . E 3 HOH 42 1042 1042 HOH HOH A . E 3 HOH 43 1043 1043 HOH HOH A . E 3 HOH 44 1044 1044 HOH HOH A . E 3 HOH 45 1045 1045 HOH HOH A . E 3 HOH 46 1046 1046 HOH HOH A . E 3 HOH 47 1047 1047 HOH HOH A . E 3 HOH 48 1048 1048 HOH HOH A . E 3 HOH 49 1049 1049 HOH HOH A . E 3 HOH 50 1050 1050 HOH HOH A . E 3 HOH 51 1051 1051 HOH HOH A . E 3 HOH 52 1052 1052 HOH HOH A . E 3 HOH 53 1053 1053 HOH HOH A . E 3 HOH 54 1054 1054 HOH HOH A . E 3 HOH 55 1055 1055 HOH HOH A . E 3 HOH 56 1056 1056 HOH HOH A . E 3 HOH 57 1057 1057 HOH HOH A . E 3 HOH 58 1058 1058 HOH HOH A . E 3 HOH 59 1059 1059 HOH HOH A . E 3 HOH 60 1060 1060 HOH HOH A . E 3 HOH 61 1061 1061 HOH HOH A . E 3 HOH 62 1062 1062 HOH HOH A . E 3 HOH 63 1063 1063 HOH HOH A . E 3 HOH 64 1064 1064 HOH HOH A . E 3 HOH 65 1065 1065 HOH HOH A . E 3 HOH 66 1066 1066 HOH HOH A . E 3 HOH 67 1067 1067 HOH HOH A . E 3 HOH 68 1068 1068 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id K _pdbx_struct_special_symmetry.auth_seq_id 26 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id K _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 72.6 ? 2 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 71.1 ? 3 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 91.0 ? 4 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 135.2 ? 5 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 75.0 ? 6 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 79.4 ? 7 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 108.8 ? 8 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 157.8 ? 9 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 69.5 ? 10 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 90.6 ? 11 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 155.9 ? 12 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 116.3 ? 13 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 128.2 ? 14 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 68.0 ? 15 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 71.8 ? 16 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 66.2 ? 17 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 128.0 ? 18 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 103.8 ? 19 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 156.1 ? 20 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 69.1 ? 21 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 92.9 ? 22 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 90.6 ? 23 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 71.7 ? 24 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 158.2 ? 25 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 107.7 ? 26 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 129.7 ? 27 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 72.8 ? 28 O6 ? A DG 20 ? A DG 20 ? 1_555 K ? C K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 78.2 ? 29 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 1_555 54.8 ? 30 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 1_555 122.8 ? 31 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 1_555 54.2 ? 32 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 1_555 127.7 ? 33 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 1_555 54.0 ? 34 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 1_555 120.9 ? 35 O6 ? A DG 20 ? A DG 20 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 1_555 49.6 ? 36 O6 ? A DG 21 ? A DG 21 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 1_555 124.4 ? 37 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 54.8 ? 38 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 122.8 ? 39 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 54.2 ? 40 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 127.7 ? 41 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 54.0 ? 42 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 120.9 ? 43 O6 ? A DG 20 ? A DG 20 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 49.6 ? 44 O6 ? A DG 21 ? A DG 21 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 124.4 ? 45 K ? D K . ? A K 26 ? 1_555 K ? C K . ? A K 25 ? 1_555 K ? D K . ? A K 26 ? 4_655 0.0 ? 46 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 4_655 137.3 ? 47 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 69.4 ? 48 O6 ? A DG 2 ? A DG 2 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 79.2 ? 49 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 4_655 79.2 ? 50 O6 ? A DG 2 ? A DG 2 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 4_655 69.4 ? 51 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 4_655 84.6 ? 52 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 105.6 ? 53 O6 ? A DG 2 ? A DG 2 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 88.3 ? 54 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 68.7 ? 55 O6 ? A DG 8 ? A DG 8 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 148.3 ? 56 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 4_655 88.3 ? 57 O6 ? A DG 2 ? A DG 2 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 4_655 105.6 ? 58 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 4_655 148.3 ? 59 O6 ? A DG 8 ? A DG 8 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 4_655 68.7 ? 60 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 4_655 141.5 ? 61 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 68.1 ? 62 O6 ? A DG 2 ? A DG 2 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 152.8 ? 63 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 109.6 ? 64 O6 ? A DG 8 ? A DG 8 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 135.6 ? 65 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 72.2 ? 66 O6 ? A DG 14 ? A DG 14 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 80.7 ? 67 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 4_655 152.8 ? 68 O6 ? A DG 2 ? A DG 2 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 4_655 68.1 ? 69 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 4_655 135.6 ? 70 O6 ? A DG 8 ? A DG 8 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 4_655 109.6 ? 71 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 4_655 80.7 ? 72 O6 ? A DG 14 ? A DG 14 ? 4_655 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 4_655 72.2 ? 73 O6 ? A DG 20 ? A DG 20 ? 1_555 K ? D K . ? A K 26 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 4_655 89.6 ? 74 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 75.2 ? 75 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 64.5 ? 76 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 92.1 ? 77 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 132.7 ? 78 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 78.0 ? 79 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 78.4 ? 80 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 95.4 ? 81 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 153.3 ? 82 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 61.6 ? 83 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 91.4 ? 84 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 150.2 ? 85 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 121.5 ? 86 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 132.1 ? 87 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 77.0 ? 88 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 78.6 ? 89 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 63.0 ? 90 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 125.9 ? 91 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 98.8 ? 92 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 156.1 ? 93 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 67.1 ? 94 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 88.2 ? 95 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 85.2 ? 96 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 77.1 ? 97 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 149.6 ? 98 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 125.4 ? 99 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 127.7 ? 100 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 76.2 ? 101 O6 ? A DG 21 ? A DG 21 ? 1_555 K ? B K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 67.1 ? 102 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 24 ? 1_555 K ? C K . ? A K 25 ? 1_555 46.5 ? 103 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 24 ? 1_555 K ? C K . ? A K 25 ? 1_555 117.6 ? 104 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 24 ? 1_555 K ? C K . ? A K 25 ? 1_555 48.4 ? 105 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 24 ? 1_555 K ? C K . ? A K 25 ? 1_555 122.7 ? 106 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 24 ? 1_555 K ? C K . ? A K 25 ? 1_555 48.9 ? 107 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? B K . ? A K 24 ? 1_555 K ? C K . ? A K 25 ? 1_555 120.5 ? 108 O6 ? A DG 21 ? A DG 21 ? 1_555 K ? B K . ? A K 24 ? 1_555 K ? C K . ? A K 25 ? 1_555 50.4 ? 109 O6 ? A DG 22 ? A DG 22 ? 1_555 K ? B K . ? A K 24 ? 1_555 K ? C K . ? A K 25 ? 1_555 111.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-05-31 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2021-02-03 6 'Structure model' 1 5 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' citation 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_site 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_citation.country' 3 5 'Structure model' '_citation.pdbx_database_id_patent' 4 5 'Structure model' '_citation.title' 5 5 'Structure model' '_citation.year' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 22 5 'Structure model' '_pdbx_struct_conn_angle.value' 23 5 'Structure model' '_struct_conn.pdbx_dist_value' 24 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 5 'Structure model' '_struct_conn.ptnr1_symmetry' 31 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_symmetry' 38 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 41 6 'Structure model' '_database_2.pdbx_DOI' 42 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 refinement . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DA 1 ? ? "C1'" A DA 1 ? ? N9 A DA 1 ? ? 112.81 108.30 4.51 0.30 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.81 108.30 5.51 0.30 N 3 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 113.86 108.30 5.56 0.30 N 4 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.60 108.30 3.30 0.30 N 5 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.42 108.30 2.12 0.30 N 6 1 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 111.95 108.30 3.65 0.30 N 7 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.38 108.30 3.08 0.30 N 8 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.61 108.30 4.31 0.30 N 9 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.17 108.30 2.87 0.30 N 10 1 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.19 108.30 1.89 0.30 N 11 1 "O4'" A DA 13 ? ? "C1'" A DA 13 ? ? N9 A DA 13 ? ? 110.84 108.30 2.54 0.30 N 12 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.12 108.30 3.82 0.30 N 13 1 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.95 108.30 3.65 0.30 N 14 1 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.96 108.30 2.66 0.30 N 15 1 "O4'" A DA 19 ? ? "C1'" A DA 19 ? ? N9 A DA 19 ? ? 111.87 108.30 3.57 0.30 N 16 1 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.72 108.30 3.42 0.30 N 17 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.31 108.30 4.01 0.30 N 18 1 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 111.22 108.30 2.92 0.30 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DG OP3 O N N 37 DG P P N N 38 DG OP1 O N N 39 DG OP2 O N N 40 DG "O5'" O N N 41 DG "C5'" C N N 42 DG "C4'" C N R 43 DG "O4'" O N N 44 DG "C3'" C N S 45 DG "O3'" O N N 46 DG "C2'" C N N 47 DG "C1'" C N R 48 DG N9 N Y N 49 DG C8 C Y N 50 DG N7 N Y N 51 DG C5 C Y N 52 DG C6 C N N 53 DG O6 O N N 54 DG N1 N N N 55 DG C2 C N N 56 DG N2 N N N 57 DG N3 N N N 58 DG C4 C Y N 59 DG HOP3 H N N 60 DG HOP2 H N N 61 DG "H5'" H N N 62 DG "H5''" H N N 63 DG "H4'" H N N 64 DG "H3'" H N N 65 DG "HO3'" H N N 66 DG "H2'" H N N 67 DG "H2''" H N N 68 DG "H1'" H N N 69 DG H8 H N N 70 DG H1 H N N 71 DG H21 H N N 72 DG H22 H N N 73 DT OP3 O N N 74 DT P P N N 75 DT OP1 O N N 76 DT OP2 O N N 77 DT "O5'" O N N 78 DT "C5'" C N N 79 DT "C4'" C N R 80 DT "O4'" O N N 81 DT "C3'" C N S 82 DT "O3'" O N N 83 DT "C2'" C N N 84 DT "C1'" C N R 85 DT N1 N N N 86 DT C2 C N N 87 DT O2 O N N 88 DT N3 N N N 89 DT C4 C N N 90 DT O4 O N N 91 DT C5 C N N 92 DT C7 C N N 93 DT C6 C N N 94 DT HOP3 H N N 95 DT HOP2 H N N 96 DT "H5'" H N N 97 DT "H5''" H N N 98 DT "H4'" H N N 99 DT "H3'" H N N 100 DT "HO3'" H N N 101 DT "H2'" H N N 102 DT "H2''" H N N 103 DT "H1'" H N N 104 DT H3 H N N 105 DT H71 H N N 106 DT H72 H N N 107 DT H73 H N N 108 DT H6 H N N 109 HOH O O N N 110 HOH H1 H N N 111 HOH H2 H N N 112 K K K N N 113 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DG OP3 P sing N N 39 DG OP3 HOP3 sing N N 40 DG P OP1 doub N N 41 DG P OP2 sing N N 42 DG P "O5'" sing N N 43 DG OP2 HOP2 sing N N 44 DG "O5'" "C5'" sing N N 45 DG "C5'" "C4'" sing N N 46 DG "C5'" "H5'" sing N N 47 DG "C5'" "H5''" sing N N 48 DG "C4'" "O4'" sing N N 49 DG "C4'" "C3'" sing N N 50 DG "C4'" "H4'" sing N N 51 DG "O4'" "C1'" sing N N 52 DG "C3'" "O3'" sing N N 53 DG "C3'" "C2'" sing N N 54 DG "C3'" "H3'" sing N N 55 DG "O3'" "HO3'" sing N N 56 DG "C2'" "C1'" sing N N 57 DG "C2'" "H2'" sing N N 58 DG "C2'" "H2''" sing N N 59 DG "C1'" N9 sing N N 60 DG "C1'" "H1'" sing N N 61 DG N9 C8 sing Y N 62 DG N9 C4 sing Y N 63 DG C8 N7 doub Y N 64 DG C8 H8 sing N N 65 DG N7 C5 sing Y N 66 DG C5 C6 sing N N 67 DG C5 C4 doub Y N 68 DG C6 O6 doub N N 69 DG C6 N1 sing N N 70 DG N1 C2 sing N N 71 DG N1 H1 sing N N 72 DG C2 N2 sing N N 73 DG C2 N3 doub N N 74 DG N2 H21 sing N N 75 DG N2 H22 sing N N 76 DG N3 C4 sing N N 77 DT OP3 P sing N N 78 DT OP3 HOP3 sing N N 79 DT P OP1 doub N N 80 DT P OP2 sing N N 81 DT P "O5'" sing N N 82 DT OP2 HOP2 sing N N 83 DT "O5'" "C5'" sing N N 84 DT "C5'" "C4'" sing N N 85 DT "C5'" "H5'" sing N N 86 DT "C5'" "H5''" sing N N 87 DT "C4'" "O4'" sing N N 88 DT "C4'" "C3'" sing N N 89 DT "C4'" "H4'" sing N N 90 DT "O4'" "C1'" sing N N 91 DT "C3'" "O3'" sing N N 92 DT "C3'" "C2'" sing N N 93 DT "C3'" "H3'" sing N N 94 DT "O3'" "HO3'" sing N N 95 DT "C2'" "C1'" sing N N 96 DT "C2'" "H2'" sing N N 97 DT "C2'" "H2''" sing N N 98 DT "C1'" N1 sing N N 99 DT "C1'" "H1'" sing N N 100 DT N1 C2 sing N N 101 DT N1 C6 sing N N 102 DT C2 O2 doub N N 103 DT C2 N3 sing N N 104 DT N3 C4 sing N N 105 DT N3 H3 sing N N 106 DT C4 O4 doub N N 107 DT C4 C5 sing N N 108 DT C5 C7 sing N N 109 DT C5 C6 doub N N 110 DT C7 H71 sing N N 111 DT C7 H72 sing N N 112 DT C7 H73 sing N N 113 DT C6 H6 sing N N 114 HOH O H1 sing N N 115 HOH O H2 sing N N 116 # _ndb_struct_conf_na.entry_id 1KF1 _ndb_struct_conf_na.feature 'quadruple helix' # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1K8P _pdbx_initial_refinement_model.details 'PDB ENTRY 1K8P' #