data_1KGD # _entry.id 1KGD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KGD pdb_00001kgd 10.2210/pdb1kgd/pdb RCSB RCSB014929 ? ? WWPDB D_1000014929 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-12-19 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KGD _pdbx_database_status.recvd_initial_deposition_date 2001-11-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, Y.' 1 'Spangenberg, O.' 2 'Paarmann, I.' 3 'Konrad, M.' 4 'Lavie, A.' 5 # _citation.id primary _citation.title 'Structural basis for nucleotide-dependent regulation of membrane-associated guanylate kinase-like domains.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 277 _citation.page_first 4159 _citation.page_last 4165 _citation.year 2002 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11729206 _citation.pdbx_database_id_DOI 10.1074/jbc.M110792200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.' 1 ? primary 'Spangenberg, O.' 2 ? primary 'Paarmann, I.' 3 ? primary 'Konrad, M.' 4 ? primary 'Lavie, A.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PERIPHERAL PLASMA MEMBRANE CASK' 20754.535 1 ? ? 'guanylate kinase like domain' ? 2 non-polymer syn 'FORMIC ACID' 46.025 5 ? ? ? ? 3 water nat water 18.015 218 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name CASK # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDA MYGTKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLNEDESLQRLQKESDILQRTYAHYFDLTI INNEIDETIRHLEEAVELVC ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDA MYGTKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLNEDESLQRLQKESDILQRTYAHYFDLTI INNEIDETIRHLEEAVELVC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ARG n 1 6 LYS n 1 7 THR n 1 8 LEU n 1 9 VAL n 1 10 LEU n 1 11 LEU n 1 12 GLY n 1 13 ALA n 1 14 HIS n 1 15 GLY n 1 16 VAL n 1 17 GLY n 1 18 ARG n 1 19 ARG n 1 20 HIS n 1 21 ILE n 1 22 LYS n 1 23 ASN n 1 24 THR n 1 25 LEU n 1 26 ILE n 1 27 THR n 1 28 LYS n 1 29 HIS n 1 30 PRO n 1 31 ASP n 1 32 ARG n 1 33 PHE n 1 34 ALA n 1 35 TYR n 1 36 PRO n 1 37 ILE n 1 38 PRO n 1 39 HIS n 1 40 THR n 1 41 THR n 1 42 ARG n 1 43 PRO n 1 44 PRO n 1 45 LYS n 1 46 LYS n 1 47 ASP n 1 48 GLU n 1 49 GLU n 1 50 ASN n 1 51 GLY n 1 52 LYS n 1 53 ASN n 1 54 TYR n 1 55 TYR n 1 56 PHE n 1 57 VAL n 1 58 SER n 1 59 HIS n 1 60 ASP n 1 61 GLN n 1 62 MET n 1 63 MET n 1 64 GLN n 1 65 ASP n 1 66 ILE n 1 67 SER n 1 68 ASN n 1 69 ASN n 1 70 GLU n 1 71 TYR n 1 72 LEU n 1 73 GLU n 1 74 TYR n 1 75 GLY n 1 76 SER n 1 77 HIS n 1 78 GLU n 1 79 ASP n 1 80 ALA n 1 81 MET n 1 82 TYR n 1 83 GLY n 1 84 THR n 1 85 LYS n 1 86 LEU n 1 87 GLU n 1 88 THR n 1 89 ILE n 1 90 ARG n 1 91 LYS n 1 92 ILE n 1 93 HIS n 1 94 GLU n 1 95 GLN n 1 96 GLY n 1 97 LEU n 1 98 ILE n 1 99 ALA n 1 100 ILE n 1 101 LEU n 1 102 ASP n 1 103 VAL n 1 104 GLU n 1 105 PRO n 1 106 GLN n 1 107 ALA n 1 108 LEU n 1 109 LYS n 1 110 VAL n 1 111 LEU n 1 112 ARG n 1 113 THR n 1 114 ALA n 1 115 GLU n 1 116 PHE n 1 117 ALA n 1 118 PRO n 1 119 PHE n 1 120 VAL n 1 121 VAL n 1 122 PHE n 1 123 ILE n 1 124 ALA n 1 125 ALA n 1 126 PRO n 1 127 THR n 1 128 ILE n 1 129 THR n 1 130 PRO n 1 131 GLY n 1 132 LEU n 1 133 ASN n 1 134 GLU n 1 135 ASP n 1 136 GLU n 1 137 SER n 1 138 LEU n 1 139 GLN n 1 140 ARG n 1 141 LEU n 1 142 GLN n 1 143 LYS n 1 144 GLU n 1 145 SER n 1 146 ASP n 1 147 ILE n 1 148 LEU n 1 149 GLN n 1 150 ARG n 1 151 THR n 1 152 TYR n 1 153 ALA n 1 154 HIS n 1 155 TYR n 1 156 PHE n 1 157 ASP n 1 158 LEU n 1 159 THR n 1 160 ILE n 1 161 ILE n 1 162 ASN n 1 163 ASN n 1 164 GLU n 1 165 ILE n 1 166 ASP n 1 167 GLU n 1 168 THR n 1 169 ILE n 1 170 ARG n 1 171 HIS n 1 172 LEU n 1 173 GLU n 1 174 GLU n 1 175 ALA n 1 176 VAL n 1 177 GLU n 1 178 LEU n 1 179 VAL n 1 180 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 730 ? ? ? A . n A 1 2 SER 2 731 ? ? ? A . n A 1 3 HIS 3 732 732 HIS HIS A . n A 1 4 MET 4 733 733 MET MET A . n A 1 5 ARG 5 734 734 ARG ARG A . n A 1 6 LYS 6 735 735 LYS LYS A . n A 1 7 THR 7 736 736 THR THR A . n A 1 8 LEU 8 737 737 LEU LEU A . n A 1 9 VAL 9 738 738 VAL VAL A . n A 1 10 LEU 10 739 739 LEU LEU A . n A 1 11 LEU 11 740 740 LEU LEU A . n A 1 12 GLY 12 741 741 GLY GLY A . n A 1 13 ALA 13 742 742 ALA ALA A . n A 1 14 HIS 14 743 743 HIS HIS A . n A 1 15 GLY 15 744 744 GLY GLY A . n A 1 16 VAL 16 745 745 VAL VAL A . n A 1 17 GLY 17 746 746 GLY GLY A . n A 1 18 ARG 18 747 747 ARG ARG A . n A 1 19 ARG 19 748 748 ARG ARG A . n A 1 20 HIS 20 749 749 HIS HIS A . n A 1 21 ILE 21 750 750 ILE ILE A . n A 1 22 LYS 22 751 751 LYS LYS A . n A 1 23 ASN 23 752 752 ASN ASN A . n A 1 24 THR 24 753 753 THR THR A . n A 1 25 LEU 25 754 754 LEU LEU A . n A 1 26 ILE 26 755 755 ILE ILE A . n A 1 27 THR 27 756 756 THR THR A . n A 1 28 LYS 28 757 757 LYS LYS A . n A 1 29 HIS 29 758 758 HIS HIS A . n A 1 30 PRO 30 759 759 PRO PRO A . n A 1 31 ASP 31 760 760 ASP ASP A . n A 1 32 ARG 32 761 761 ARG ARG A . n A 1 33 PHE 33 762 762 PHE PHE A . n A 1 34 ALA 34 763 763 ALA ALA A . n A 1 35 TYR 35 764 764 TYR TYR A . n A 1 36 PRO 36 765 765 PRO PRO A . n A 1 37 ILE 37 766 766 ILE ILE A . n A 1 38 PRO 38 767 767 PRO PRO A . n A 1 39 HIS 39 768 768 HIS HIS A . n A 1 40 THR 40 769 769 THR THR A . n A 1 41 THR 41 770 770 THR THR A . n A 1 42 ARG 42 771 771 ARG ARG A . n A 1 43 PRO 43 772 772 PRO PRO A . n A 1 44 PRO 44 773 773 PRO PRO A . n A 1 45 LYS 45 774 ? ? ? A . n A 1 46 LYS 46 775 ? ? ? A . n A 1 47 ASP 47 776 ? ? ? A . n A 1 48 GLU 48 777 777 GLU GLU A . n A 1 49 GLU 49 778 778 GLU GLU A . n A 1 50 ASN 50 779 779 ASN ASN A . n A 1 51 GLY 51 780 780 GLY GLY A . n A 1 52 LYS 52 781 781 LYS LYS A . n A 1 53 ASN 53 782 782 ASN ASN A . n A 1 54 TYR 54 783 783 TYR TYR A . n A 1 55 TYR 55 784 784 TYR TYR A . n A 1 56 PHE 56 785 785 PHE PHE A . n A 1 57 VAL 57 786 786 VAL VAL A . n A 1 58 SER 58 787 787 SER SER A . n A 1 59 HIS 59 788 788 HIS HIS A . n A 1 60 ASP 60 789 789 ASP ASP A . n A 1 61 GLN 61 790 790 GLN GLN A . n A 1 62 MET 62 791 791 MET MET A . n A 1 63 MET 63 792 792 MET MET A . n A 1 64 GLN 64 793 793 GLN GLN A . n A 1 65 ASP 65 794 794 ASP ASP A . n A 1 66 ILE 66 795 795 ILE ILE A . n A 1 67 SER 67 796 796 SER SER A . n A 1 68 ASN 68 797 797 ASN ASN A . n A 1 69 ASN 69 798 798 ASN ASN A . n A 1 70 GLU 70 799 799 GLU GLU A . n A 1 71 TYR 71 800 800 TYR TYR A . n A 1 72 LEU 72 801 801 LEU LEU A . n A 1 73 GLU 73 802 802 GLU GLU A . n A 1 74 TYR 74 803 803 TYR TYR A . n A 1 75 GLY 75 804 804 GLY GLY A . n A 1 76 SER 76 805 805 SER SER A . n A 1 77 HIS 77 806 806 HIS HIS A . n A 1 78 GLU 78 807 807 GLU GLU A . n A 1 79 ASP 79 808 808 ASP ASP A . n A 1 80 ALA 80 809 809 ALA ALA A . n A 1 81 MET 81 810 810 MET MET A . n A 1 82 TYR 82 811 811 TYR TYR A . n A 1 83 GLY 83 812 812 GLY GLY A . n A 1 84 THR 84 813 813 THR THR A . n A 1 85 LYS 85 814 814 LYS LYS A . n A 1 86 LEU 86 815 815 LEU LEU A . n A 1 87 GLU 87 816 816 GLU GLU A . n A 1 88 THR 88 817 817 THR THR A . n A 1 89 ILE 89 818 818 ILE ILE A . n A 1 90 ARG 90 819 819 ARG ARG A . n A 1 91 LYS 91 820 820 LYS LYS A . n A 1 92 ILE 92 821 821 ILE ILE A . n A 1 93 HIS 93 822 822 HIS HIS A . n A 1 94 GLU 94 823 823 GLU GLU A . n A 1 95 GLN 95 824 824 GLN GLN A . n A 1 96 GLY 96 825 825 GLY GLY A . n A 1 97 LEU 97 826 826 LEU LEU A . n A 1 98 ILE 98 827 827 ILE ILE A . n A 1 99 ALA 99 828 828 ALA ALA A . n A 1 100 ILE 100 829 829 ILE ILE A . n A 1 101 LEU 101 830 830 LEU LEU A . n A 1 102 ASP 102 831 831 ASP ASP A . n A 1 103 VAL 103 832 832 VAL VAL A . n A 1 104 GLU 104 833 833 GLU GLU A . n A 1 105 PRO 105 834 834 PRO PRO A . n A 1 106 GLN 106 835 835 GLN GLN A . n A 1 107 ALA 107 836 836 ALA ALA A . n A 1 108 LEU 108 837 837 LEU LEU A . n A 1 109 LYS 109 838 838 LYS LYS A . n A 1 110 VAL 110 839 839 VAL VAL A . n A 1 111 LEU 111 840 840 LEU LEU A . n A 1 112 ARG 112 841 841 ARG ARG A . n A 1 113 THR 113 842 842 THR THR A . n A 1 114 ALA 114 843 843 ALA ALA A . n A 1 115 GLU 115 844 844 GLU GLU A . n A 1 116 PHE 116 845 845 PHE PHE A . n A 1 117 ALA 117 846 846 ALA ALA A . n A 1 118 PRO 118 847 847 PRO PRO A . n A 1 119 PHE 119 848 848 PHE PHE A . n A 1 120 VAL 120 849 849 VAL VAL A . n A 1 121 VAL 121 850 850 VAL VAL A . n A 1 122 PHE 122 851 851 PHE PHE A . n A 1 123 ILE 123 852 852 ILE ILE A . n A 1 124 ALA 124 853 853 ALA ALA A . n A 1 125 ALA 125 854 854 ALA ALA A . n A 1 126 PRO 126 855 855 PRO PRO A . n A 1 127 THR 127 856 856 THR THR A . n A 1 128 ILE 128 857 857 ILE ILE A . n A 1 129 THR 129 858 858 THR THR A . n A 1 130 PRO 130 859 859 PRO PRO A . n A 1 131 GLY 131 860 860 GLY GLY A . n A 1 132 LEU 132 861 861 LEU LEU A . n A 1 133 ASN 133 862 862 ASN ASN A . n A 1 134 GLU 134 863 863 GLU GLU A . n A 1 135 ASP 135 864 864 ASP ASP A . n A 1 136 GLU 136 865 865 GLU GLU A . n A 1 137 SER 137 866 866 SER SER A . n A 1 138 LEU 138 867 867 LEU LEU A . n A 1 139 GLN 139 868 868 GLN GLN A . n A 1 140 ARG 140 869 869 ARG ARG A . n A 1 141 LEU 141 870 870 LEU LEU A . n A 1 142 GLN 142 871 871 GLN GLN A . n A 1 143 LYS 143 872 872 LYS LYS A . n A 1 144 GLU 144 873 873 GLU GLU A . n A 1 145 SER 145 874 874 SER SER A . n A 1 146 ASP 146 875 875 ASP ASP A . n A 1 147 ILE 147 876 876 ILE ILE A . n A 1 148 LEU 148 877 877 LEU LEU A . n A 1 149 GLN 149 878 878 GLN GLN A . n A 1 150 ARG 150 879 879 ARG ARG A . n A 1 151 THR 151 880 880 THR THR A . n A 1 152 TYR 152 881 881 TYR TYR A . n A 1 153 ALA 153 882 882 ALA ALA A . n A 1 154 HIS 154 883 883 HIS HIS A . n A 1 155 TYR 155 884 884 TYR TYR A . n A 1 156 PHE 156 885 885 PHE PHE A . n A 1 157 ASP 157 886 886 ASP ASP A . n A 1 158 LEU 158 887 887 LEU LEU A . n A 1 159 THR 159 888 888 THR THR A . n A 1 160 ILE 160 889 889 ILE ILE A . n A 1 161 ILE 161 890 890 ILE ILE A . n A 1 162 ASN 162 891 891 ASN ASN A . n A 1 163 ASN 163 892 892 ASN ASN A . n A 1 164 GLU 164 893 893 GLU GLU A . n A 1 165 ILE 165 894 894 ILE ILE A . n A 1 166 ASP 166 895 895 ASP ASP A . n A 1 167 GLU 167 896 896 GLU GLU A . n A 1 168 THR 168 897 897 THR THR A . n A 1 169 ILE 169 898 898 ILE ILE A . n A 1 170 ARG 170 899 899 ARG ARG A . n A 1 171 HIS 171 900 900 HIS HIS A . n A 1 172 LEU 172 901 901 LEU LEU A . n A 1 173 GLU 173 902 902 GLU GLU A . n A 1 174 GLU 174 903 903 GLU GLU A . n A 1 175 ALA 175 904 904 ALA ALA A . n A 1 176 VAL 176 905 905 VAL VAL A . n A 1 177 GLU 177 906 906 GLU GLU A . n A 1 178 LEU 178 907 907 LEU LEU A . n A 1 179 VAL 179 908 908 VAL VAL A . n A 1 180 CYS 180 909 909 CYS CYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT 1 601 601 FMT FMT A . C 2 FMT 1 602 602 FMT FMT A . D 2 FMT 1 603 603 FMT FMT A . E 2 FMT 1 604 604 FMT FMT A . F 2 FMT 1 605 605 FMT FMT A . G 3 HOH 1 1 1 HOH HOH A . G 3 HOH 2 2 2 HOH HOH A . G 3 HOH 3 3 3 HOH HOH A . G 3 HOH 4 4 4 HOH HOH A . G 3 HOH 5 5 5 HOH HOH A . G 3 HOH 6 6 6 HOH HOH A . G 3 HOH 7 7 7 HOH HOH A . G 3 HOH 8 8 8 HOH HOH A . G 3 HOH 9 9 9 HOH HOH A . G 3 HOH 10 10 10 HOH HOH A . G 3 HOH 11 11 11 HOH HOH A . G 3 HOH 12 12 12 HOH HOH A . G 3 HOH 13 13 13 HOH HOH A . G 3 HOH 14 14 14 HOH HOH A . G 3 HOH 15 15 15 HOH HOH A . G 3 HOH 16 16 16 HOH HOH A . G 3 HOH 17 17 17 HOH HOH A . G 3 HOH 18 18 18 HOH HOH A . G 3 HOH 19 19 19 HOH HOH A . G 3 HOH 20 20 20 HOH HOH A . G 3 HOH 21 21 21 HOH HOH A . G 3 HOH 22 22 22 HOH HOH A . G 3 HOH 23 23 23 HOH HOH A . G 3 HOH 24 24 24 HOH HOH A . G 3 HOH 25 25 25 HOH HOH A . G 3 HOH 26 26 26 HOH HOH A . G 3 HOH 27 27 27 HOH HOH A . G 3 HOH 28 28 28 HOH HOH A . G 3 HOH 29 29 29 HOH HOH A . G 3 HOH 30 30 30 HOH HOH A . G 3 HOH 31 31 31 HOH HOH A . G 3 HOH 32 32 32 HOH HOH A . G 3 HOH 33 33 33 HOH HOH A . G 3 HOH 34 34 34 HOH HOH A . G 3 HOH 35 35 35 HOH HOH A . G 3 HOH 36 36 36 HOH HOH A . G 3 HOH 37 37 37 HOH HOH A . G 3 HOH 38 38 38 HOH HOH A . G 3 HOH 39 39 39 HOH HOH A . G 3 HOH 40 40 40 HOH HOH A . G 3 HOH 41 41 41 HOH HOH A . G 3 HOH 42 42 42 HOH HOH A . G 3 HOH 43 43 43 HOH HOH A . G 3 HOH 44 44 44 HOH HOH A . G 3 HOH 45 45 45 HOH HOH A . G 3 HOH 46 46 46 HOH HOH A . G 3 HOH 47 47 47 HOH HOH A . G 3 HOH 48 48 48 HOH HOH A . G 3 HOH 49 49 49 HOH HOH A . G 3 HOH 50 50 50 HOH HOH A . G 3 HOH 51 51 51 HOH HOH A . G 3 HOH 52 52 52 HOH HOH A . G 3 HOH 53 53 53 HOH HOH A . G 3 HOH 54 54 54 HOH HOH A . G 3 HOH 55 55 55 HOH HOH A . G 3 HOH 56 56 56 HOH HOH A . G 3 HOH 57 57 57 HOH HOH A . G 3 HOH 58 58 58 HOH HOH A . G 3 HOH 59 59 59 HOH HOH A . G 3 HOH 60 60 60 HOH HOH A . G 3 HOH 61 61 61 HOH HOH A . G 3 HOH 62 62 62 HOH HOH A . G 3 HOH 63 63 63 HOH HOH A . G 3 HOH 64 64 64 HOH HOH A . G 3 HOH 65 65 65 HOH HOH A . G 3 HOH 66 66 66 HOH HOH A . G 3 HOH 67 67 67 HOH HOH A . G 3 HOH 68 68 68 HOH HOH A . G 3 HOH 69 69 69 HOH HOH A . G 3 HOH 70 70 70 HOH HOH A . G 3 HOH 71 71 71 HOH HOH A . G 3 HOH 72 72 72 HOH HOH A . G 3 HOH 73 73 73 HOH HOH A . G 3 HOH 74 74 74 HOH HOH A . G 3 HOH 75 75 75 HOH HOH A . G 3 HOH 76 76 76 HOH HOH A . G 3 HOH 77 77 77 HOH HOH A . G 3 HOH 78 78 78 HOH HOH A . G 3 HOH 79 79 79 HOH HOH A . G 3 HOH 80 80 80 HOH HOH A . G 3 HOH 81 81 81 HOH HOH A . G 3 HOH 82 82 82 HOH HOH A . G 3 HOH 83 83 83 HOH HOH A . G 3 HOH 84 84 84 HOH HOH A . G 3 HOH 85 85 85 HOH HOH A . G 3 HOH 86 86 86 HOH HOH A . G 3 HOH 87 87 87 HOH HOH A . G 3 HOH 88 88 88 HOH HOH A . G 3 HOH 89 89 89 HOH HOH A . G 3 HOH 90 90 90 HOH HOH A . G 3 HOH 91 91 91 HOH HOH A . G 3 HOH 92 92 92 HOH HOH A . G 3 HOH 93 93 93 HOH HOH A . G 3 HOH 94 94 94 HOH HOH A . G 3 HOH 95 95 95 HOH HOH A . G 3 HOH 96 96 96 HOH HOH A . G 3 HOH 97 97 97 HOH HOH A . G 3 HOH 98 98 98 HOH HOH A . G 3 HOH 99 99 99 HOH HOH A . G 3 HOH 100 100 100 HOH HOH A . G 3 HOH 101 101 101 HOH HOH A . G 3 HOH 102 102 102 HOH HOH A . G 3 HOH 103 103 103 HOH HOH A . G 3 HOH 104 104 104 HOH HOH A . G 3 HOH 105 105 105 HOH HOH A . G 3 HOH 106 106 106 HOH HOH A . G 3 HOH 107 107 107 HOH HOH A . G 3 HOH 108 108 108 HOH HOH A . G 3 HOH 109 109 109 HOH HOH A . G 3 HOH 110 110 110 HOH HOH A . G 3 HOH 111 111 111 HOH HOH A . G 3 HOH 112 112 112 HOH HOH A . G 3 HOH 113 113 113 HOH HOH A . G 3 HOH 114 114 114 HOH HOH A . G 3 HOH 115 115 115 HOH HOH A . G 3 HOH 116 116 116 HOH HOH A . G 3 HOH 117 117 117 HOH HOH A . G 3 HOH 118 118 118 HOH HOH A . G 3 HOH 119 119 119 HOH HOH A . G 3 HOH 120 120 120 HOH HOH A . G 3 HOH 121 121 121 HOH HOH A . G 3 HOH 122 122 122 HOH HOH A . G 3 HOH 123 123 123 HOH HOH A . G 3 HOH 124 124 124 HOH HOH A . G 3 HOH 125 125 125 HOH HOH A . G 3 HOH 126 126 126 HOH HOH A . G 3 HOH 127 127 127 HOH HOH A . G 3 HOH 128 128 128 HOH HOH A . G 3 HOH 129 129 129 HOH HOH A . G 3 HOH 130 130 130 HOH HOH A . G 3 HOH 131 131 131 HOH HOH A . G 3 HOH 132 132 132 HOH HOH A . G 3 HOH 133 133 133 HOH HOH A . G 3 HOH 134 134 134 HOH HOH A . G 3 HOH 135 135 135 HOH HOH A . G 3 HOH 136 136 136 HOH HOH A . G 3 HOH 137 137 137 HOH HOH A . G 3 HOH 138 138 138 HOH HOH A . G 3 HOH 139 139 139 HOH HOH A . G 3 HOH 140 140 140 HOH HOH A . G 3 HOH 141 141 141 HOH HOH A . G 3 HOH 142 142 142 HOH HOH A . G 3 HOH 143 143 143 HOH HOH A . G 3 HOH 144 144 144 HOH HOH A . G 3 HOH 145 145 145 HOH HOH A . G 3 HOH 146 146 146 HOH HOH A . G 3 HOH 147 147 147 HOH HOH A . G 3 HOH 148 148 148 HOH HOH A . G 3 HOH 149 149 149 HOH HOH A . G 3 HOH 150 150 150 HOH HOH A . G 3 HOH 151 151 151 HOH HOH A . G 3 HOH 152 152 152 HOH HOH A . G 3 HOH 153 153 153 HOH HOH A . G 3 HOH 154 154 154 HOH HOH A . G 3 HOH 155 155 155 HOH HOH A . G 3 HOH 156 156 156 HOH HOH A . G 3 HOH 157 157 157 HOH HOH A . G 3 HOH 158 158 158 HOH HOH A . G 3 HOH 159 159 159 HOH HOH A . G 3 HOH 160 160 160 HOH HOH A . G 3 HOH 161 161 161 HOH HOH A . G 3 HOH 162 162 162 HOH HOH A . G 3 HOH 163 163 163 HOH HOH A . G 3 HOH 164 164 164 HOH HOH A . G 3 HOH 165 165 165 HOH HOH A . G 3 HOH 166 166 166 HOH HOH A . G 3 HOH 167 167 167 HOH HOH A . G 3 HOH 168 168 168 HOH HOH A . G 3 HOH 169 169 169 HOH HOH A . G 3 HOH 170 170 170 HOH HOH A . G 3 HOH 171 171 171 HOH HOH A . G 3 HOH 172 172 172 HOH HOH A . G 3 HOH 173 173 173 HOH HOH A . G 3 HOH 174 174 174 HOH HOH A . G 3 HOH 175 175 175 HOH HOH A . G 3 HOH 176 176 176 HOH HOH A . G 3 HOH 177 177 177 HOH HOH A . G 3 HOH 178 178 178 HOH HOH A . G 3 HOH 179 179 179 HOH HOH A . G 3 HOH 180 180 180 HOH HOH A . G 3 HOH 181 181 181 HOH HOH A . G 3 HOH 182 182 182 HOH HOH A . G 3 HOH 183 183 183 HOH HOH A . G 3 HOH 184 184 184 HOH HOH A . G 3 HOH 185 185 185 HOH HOH A . G 3 HOH 186 186 186 HOH HOH A . G 3 HOH 187 187 187 HOH HOH A . G 3 HOH 188 188 188 HOH HOH A . G 3 HOH 189 189 189 HOH HOH A . G 3 HOH 190 190 190 HOH HOH A . G 3 HOH 191 191 191 HOH HOH A . G 3 HOH 192 192 192 HOH HOH A . G 3 HOH 193 193 193 HOH HOH A . G 3 HOH 194 194 194 HOH HOH A . G 3 HOH 195 195 195 HOH HOH A . G 3 HOH 196 196 196 HOH HOH A . G 3 HOH 197 197 197 HOH HOH A . G 3 HOH 198 198 198 HOH HOH A . G 3 HOH 199 199 199 HOH HOH A . G 3 HOH 200 200 200 HOH HOH A . G 3 HOH 201 201 201 HOH HOH A . G 3 HOH 202 202 202 HOH HOH A . G 3 HOH 203 203 203 HOH HOH A . G 3 HOH 204 204 204 HOH HOH A . G 3 HOH 205 205 205 HOH HOH A . G 3 HOH 206 206 206 HOH HOH A . G 3 HOH 207 207 207 HOH HOH A . G 3 HOH 208 208 208 HOH HOH A . G 3 HOH 209 209 209 HOH HOH A . G 3 HOH 210 210 210 HOH HOH A . G 3 HOH 211 211 211 HOH HOH A . G 3 HOH 212 212 212 HOH HOH A . G 3 HOH 213 213 213 HOH HOH A . G 3 HOH 214 214 214 HOH HOH A . G 3 HOH 215 215 215 HOH HOH A . G 3 HOH 216 216 216 HOH HOH A . G 3 HOH 217 217 217 HOH HOH A . G 3 HOH 218 218 218 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 761 ? CD ? A ARG 32 CD 2 1 Y 1 A ARG 761 ? NE ? A ARG 32 NE 3 1 Y 1 A ARG 761 ? CZ ? A ARG 32 CZ 4 1 Y 1 A ARG 761 ? NH1 ? A ARG 32 NH1 5 1 Y 1 A ARG 761 ? NH2 ? A ARG 32 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SOLVE phasing . ? 1 REFMAC refinement 5.0 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 1KGD _cell.length_a 70.341 _cell.length_b 70.341 _cell.length_c 74.861 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KGD _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # _exptl.entry_id 1KGD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_percent_sol 52.23 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'sodium formate, potassium chloride, magnesium chloride, Tris, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-03-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1KGD _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.31 _reflns.number_obs 48853 _reflns.number_all ? _reflns.percent_possible_obs 94.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0340000 _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.31 _reflns_shell.d_res_low 1.40 _reflns_shell.percent_possible_all 81 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.1450000 _reflns_shell.meanI_over_sigI_obs 8.31 _reflns_shell.pdbx_redundancy 5.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1KGD _refine.ls_number_reflns_obs 43926 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 12.00 _refine.ls_d_res_high 1.314 _refine.ls_percent_reflns_obs 95.06 _refine.ls_R_factor_obs 0.1881800 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1855200 _refine.ls_R_factor_R_free 0.2124400 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 4927 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 25.768 _refine.aniso_B[1][1] 0.49 _refine.aniso_B[2][2] 0.49 _refine.aniso_B[3][3] -0.73 _refine.aniso_B[1][2] 0.24 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model 'BABINET MODEL WITH MASK' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.064 _refine.overall_SU_B 2.232 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML 0.040 _refine.pdbx_overall_ESU_R 0.070 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1466 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 233 _refine_hist.number_atoms_total 1699 _refine_hist.d_res_high 1.314 _refine_hist.d_res_low 12.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.021 ? 1466 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.262 1.952 ? 1978 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.238 3.000 ? 173 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.336 15.000 ? 268 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 221 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1112 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.249 0.300 ? 715 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.369 0.500 ? 204 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.271 0.300 ? 55 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.197 0.500 ? 22 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.937 1.500 ? 885 'X-RAY DIFFRACTION' ? r_mcangle_it 1.668 2.000 ? 1424 'X-RAY DIFFRACTION' ? r_scbond_it 2.197 3.000 ? 581 'X-RAY DIFFRACTION' ? r_scangle_it 3.559 4.500 ? 554 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.104 2.000 ? 1466 'X-RAY DIFFRACTION' ? r_sphericity_free 1.315 2.000 ? 219 'X-RAY DIFFRACTION' ? r_sphericity_bonded 1.589 2.000 ? 1440 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.314 _refine_ls_shell.d_res_low 1.348 _refine_ls_shell.number_reflns_R_work 2433 _refine_ls_shell.R_factor_R_work 0.2090000 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2360000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 281 _refine_ls_shell.number_reflns_obs 48853 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1KGD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1KGD _struct.title 'Crystal Structure of the Guanylate Kinase-like Domain of Human CASK' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KGD _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'MAGUK, CASK, GUANYLATE KINASE LIKE DOMAIN, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CSKP_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKRDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAMYGT KLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLNEDESLQRLQKESDILQRTYAHYFDLTIINNE IDETIRHLEEAVELVC ; _struct_ref.pdbx_align_begin 734 _struct_ref.pdbx_db_accession O14936 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KGD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O14936 _struct_ref_seq.db_align_beg 734 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 909 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 734 _struct_ref_seq.pdbx_auth_seq_align_end 909 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1KGD GLY A 1 ? UNP O14936 ? ? 'see remark 999' 730 1 1 1KGD SER A 2 ? UNP O14936 ? ? 'see remark 999' 731 2 1 1KGD HIS A 3 ? UNP O14936 ? ? 'see remark 999' 732 3 1 1KGD MET A 4 ? UNP O14936 ? ? 'see remark 999' 733 4 1 1KGD LYS A 46 ? UNP O14936 ARG 775 'cloning artifact' 775 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 17 ? HIS A 29 ? GLY A 746 HIS A 758 1 ? 13 HELX_P HELX_P2 2 SER A 58 ? ASN A 68 ? SER A 787 ASN A 797 1 ? 11 HELX_P HELX_P3 3 LEU A 86 ? GLN A 95 ? LEU A 815 GLN A 824 1 ? 10 HELX_P HELX_P4 4 GLU A 104 ? GLN A 106 ? GLU A 833 GLN A 835 5 ? 3 HELX_P HELX_P5 5 ALA A 107 ? ARG A 112 ? ALA A 836 ARG A 841 1 ? 6 HELX_P HELX_P6 6 ASP A 135 ? ALA A 153 ? ASP A 864 ALA A 882 1 ? 19 HELX_P HELX_P7 7 HIS A 154 ? PHE A 156 ? HIS A 883 PHE A 885 5 ? 3 HELX_P HELX_P8 8 GLU A 164 ? CYS A 180 ? GLU A 893 CYS A 909 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 33 ? ALA A 34 ? PHE A 762 ALA A 763 A 2 ILE A 98 ? ASP A 102 ? ILE A 827 ASP A 831 A 3 THR A 7 ? LEU A 11 ? THR A 736 LEU A 740 A 4 PRO A 118 ? ALA A 124 ? PRO A 847 ALA A 853 A 5 LEU A 158 ? ILE A 161 ? LEU A 887 ILE A 890 B 1 TYR A 55 ? PHE A 56 ? TYR A 784 PHE A 785 B 2 HIS A 39 ? THR A 40 ? HIS A 768 THR A 769 B 3 ALA A 80 ? LYS A 85 ? ALA A 809 LYS A 814 B 4 TYR A 71 ? HIS A 77 ? TYR A 800 HIS A 806 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 34 ? N ALA A 763 O ILE A 100 ? O ILE A 829 A 2 3 O ALA A 99 ? O ALA A 828 N LEU A 8 ? N LEU A 737 A 3 4 N LEU A 11 ? N LEU A 740 O ILE A 123 ? O ILE A 852 A 4 5 N PHE A 122 ? N PHE A 851 O LEU A 158 ? O LEU A 887 B 1 2 O TYR A 55 ? O TYR A 784 N THR A 40 ? N THR A 769 B 2 3 N HIS A 39 ? N HIS A 768 O GLY A 83 ? O GLY A 812 B 3 4 O ALA A 80 ? O ALA A 809 N HIS A 77 ? N HIS A 806 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMT 601 ? 2 'BINDING SITE FOR RESIDUE FMT A 601' AC2 Software A FMT 602 ? 4 'BINDING SITE FOR RESIDUE FMT A 602' AC3 Software A FMT 603 ? 3 'BINDING SITE FOR RESIDUE FMT A 603' AC4 Software A FMT 604 ? 6 'BINDING SITE FOR RESIDUE FMT A 604' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 TYR A 82 ? TYR A 811 . ? 1_555 ? 2 AC1 2 GLY A 83 ? GLY A 812 . ? 1_555 ? 3 AC2 4 PRO A 105 ? PRO A 834 . ? 5_665 ? 4 AC2 4 GLN A 106 ? GLN A 835 . ? 5_665 ? 5 AC2 4 TYR A 152 ? TYR A 881 . ? 5_665 ? 6 AC2 4 TYR A 155 ? TYR A 884 . ? 5_665 ? 7 AC3 3 HOH G . ? HOH A 185 . ? 5_665 ? 8 AC3 3 PRO A 30 ? PRO A 759 . ? 1_555 ? 9 AC3 3 ILE A 147 ? ILE A 876 . ? 5_665 ? 10 AC4 6 HOH G . ? HOH A 161 . ? 1_555 ? 11 AC4 6 HOH G . ? HOH A 176 . ? 1_555 ? 12 AC4 6 TYR A 35 ? TYR A 764 . ? 1_555 ? 13 AC4 6 ILE A 92 ? ILE A 821 . ? 1_555 ? 14 AC4 6 GLN A 95 ? GLN A 824 . ? 1_555 ? 15 AC4 6 ARG A 150 ? ARG A 879 . ? 5_665 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 61 ? ? O A HOH 206 ? ? 2.06 2 1 O A HOH 10 ? ? O A HOH 63 ? ? 2.08 3 1 O A HOH 155 ? ? O A HOH 207 ? ? 2.11 4 1 O A HOH 68 ? ? O A HOH 164 ? ? 2.12 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG1 A VAL 786 ? A CB A VAL 786 ? A CG2 A VAL 786 ? A 133.55 110.90 22.65 1.60 N 2 1 CG1 A VAL 786 ? B CB A VAL 786 ? B CG2 A VAL 786 ? B 134.23 110.90 23.33 1.60 N 3 1 CG1 A VAL 786 ? C CB A VAL 786 ? C CG2 A VAL 786 ? C 134.75 110.90 23.85 1.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 778 ? ? 69.82 106.67 2 1 ALA A 846 ? ? 35.52 65.97 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 730 ? A GLY 1 2 1 Y 1 A SER 731 ? A SER 2 3 1 Y 1 A LYS 774 ? A LYS 45 4 1 Y 1 A LYS 775 ? A LYS 46 5 1 Y 1 A ASP 776 ? A ASP 47 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FMT C C N N 88 FMT O1 O N N 89 FMT O2 O N N 90 FMT H H N N 91 FMT HO2 H N N 92 GLN N N N N 93 GLN CA C N S 94 GLN C C N N 95 GLN O O N N 96 GLN CB C N N 97 GLN CG C N N 98 GLN CD C N N 99 GLN OE1 O N N 100 GLN NE2 N N N 101 GLN OXT O N N 102 GLN H H N N 103 GLN H2 H N N 104 GLN HA H N N 105 GLN HB2 H N N 106 GLN HB3 H N N 107 GLN HG2 H N N 108 GLN HG3 H N N 109 GLN HE21 H N N 110 GLN HE22 H N N 111 GLN HXT H N N 112 GLU N N N N 113 GLU CA C N S 114 GLU C C N N 115 GLU O O N N 116 GLU CB C N N 117 GLU CG C N N 118 GLU CD C N N 119 GLU OE1 O N N 120 GLU OE2 O N N 121 GLU OXT O N N 122 GLU H H N N 123 GLU H2 H N N 124 GLU HA H N N 125 GLU HB2 H N N 126 GLU HB3 H N N 127 GLU HG2 H N N 128 GLU HG3 H N N 129 GLU HE2 H N N 130 GLU HXT H N N 131 GLY N N N N 132 GLY CA C N N 133 GLY C C N N 134 GLY O O N N 135 GLY OXT O N N 136 GLY H H N N 137 GLY H2 H N N 138 GLY HA2 H N N 139 GLY HA3 H N N 140 GLY HXT H N N 141 HIS N N N N 142 HIS CA C N S 143 HIS C C N N 144 HIS O O N N 145 HIS CB C N N 146 HIS CG C Y N 147 HIS ND1 N Y N 148 HIS CD2 C Y N 149 HIS CE1 C Y N 150 HIS NE2 N Y N 151 HIS OXT O N N 152 HIS H H N N 153 HIS H2 H N N 154 HIS HA H N N 155 HIS HB2 H N N 156 HIS HB3 H N N 157 HIS HD1 H N N 158 HIS HD2 H N N 159 HIS HE1 H N N 160 HIS HE2 H N N 161 HIS HXT H N N 162 HOH O O N N 163 HOH H1 H N N 164 HOH H2 H N N 165 ILE N N N N 166 ILE CA C N S 167 ILE C C N N 168 ILE O O N N 169 ILE CB C N S 170 ILE CG1 C N N 171 ILE CG2 C N N 172 ILE CD1 C N N 173 ILE OXT O N N 174 ILE H H N N 175 ILE H2 H N N 176 ILE HA H N N 177 ILE HB H N N 178 ILE HG12 H N N 179 ILE HG13 H N N 180 ILE HG21 H N N 181 ILE HG22 H N N 182 ILE HG23 H N N 183 ILE HD11 H N N 184 ILE HD12 H N N 185 ILE HD13 H N N 186 ILE HXT H N N 187 LEU N N N N 188 LEU CA C N S 189 LEU C C N N 190 LEU O O N N 191 LEU CB C N N 192 LEU CG C N N 193 LEU CD1 C N N 194 LEU CD2 C N N 195 LEU OXT O N N 196 LEU H H N N 197 LEU H2 H N N 198 LEU HA H N N 199 LEU HB2 H N N 200 LEU HB3 H N N 201 LEU HG H N N 202 LEU HD11 H N N 203 LEU HD12 H N N 204 LEU HD13 H N N 205 LEU HD21 H N N 206 LEU HD22 H N N 207 LEU HD23 H N N 208 LEU HXT H N N 209 LYS N N N N 210 LYS CA C N S 211 LYS C C N N 212 LYS O O N N 213 LYS CB C N N 214 LYS CG C N N 215 LYS CD C N N 216 LYS CE C N N 217 LYS NZ N N N 218 LYS OXT O N N 219 LYS H H N N 220 LYS H2 H N N 221 LYS HA H N N 222 LYS HB2 H N N 223 LYS HB3 H N N 224 LYS HG2 H N N 225 LYS HG3 H N N 226 LYS HD2 H N N 227 LYS HD3 H N N 228 LYS HE2 H N N 229 LYS HE3 H N N 230 LYS HZ1 H N N 231 LYS HZ2 H N N 232 LYS HZ3 H N N 233 LYS HXT H N N 234 MET N N N N 235 MET CA C N S 236 MET C C N N 237 MET O O N N 238 MET CB C N N 239 MET CG C N N 240 MET SD S N N 241 MET CE C N N 242 MET OXT O N N 243 MET H H N N 244 MET H2 H N N 245 MET HA H N N 246 MET HB2 H N N 247 MET HB3 H N N 248 MET HG2 H N N 249 MET HG3 H N N 250 MET HE1 H N N 251 MET HE2 H N N 252 MET HE3 H N N 253 MET HXT H N N 254 PHE N N N N 255 PHE CA C N S 256 PHE C C N N 257 PHE O O N N 258 PHE CB C N N 259 PHE CG C Y N 260 PHE CD1 C Y N 261 PHE CD2 C Y N 262 PHE CE1 C Y N 263 PHE CE2 C Y N 264 PHE CZ C Y N 265 PHE OXT O N N 266 PHE H H N N 267 PHE H2 H N N 268 PHE HA H N N 269 PHE HB2 H N N 270 PHE HB3 H N N 271 PHE HD1 H N N 272 PHE HD2 H N N 273 PHE HE1 H N N 274 PHE HE2 H N N 275 PHE HZ H N N 276 PHE HXT H N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 SER N N N N 295 SER CA C N S 296 SER C C N N 297 SER O O N N 298 SER CB C N N 299 SER OG O N N 300 SER OXT O N N 301 SER H H N N 302 SER H2 H N N 303 SER HA H N N 304 SER HB2 H N N 305 SER HB3 H N N 306 SER HG H N N 307 SER HXT H N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TYR N N N N 326 TYR CA C N S 327 TYR C C N N 328 TYR O O N N 329 TYR CB C N N 330 TYR CG C Y N 331 TYR CD1 C Y N 332 TYR CD2 C Y N 333 TYR CE1 C Y N 334 TYR CE2 C Y N 335 TYR CZ C Y N 336 TYR OH O N N 337 TYR OXT O N N 338 TYR H H N N 339 TYR H2 H N N 340 TYR HA H N N 341 TYR HB2 H N N 342 TYR HB3 H N N 343 TYR HD1 H N N 344 TYR HD2 H N N 345 TYR HE1 H N N 346 TYR HE2 H N N 347 TYR HH H N N 348 TYR HXT H N N 349 VAL N N N N 350 VAL CA C N S 351 VAL C C N N 352 VAL O O N N 353 VAL CB C N N 354 VAL CG1 C N N 355 VAL CG2 C N N 356 VAL OXT O N N 357 VAL H H N N 358 VAL H2 H N N 359 VAL HA H N N 360 VAL HB H N N 361 VAL HG11 H N N 362 VAL HG12 H N N 363 VAL HG13 H N N 364 VAL HG21 H N N 365 VAL HG22 H N N 366 VAL HG23 H N N 367 VAL HXT H N N 368 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FMT C O1 doub N N 83 FMT C O2 sing N N 84 FMT C H sing N N 85 FMT O2 HO2 sing N N 86 GLN N CA sing N N 87 GLN N H sing N N 88 GLN N H2 sing N N 89 GLN CA C sing N N 90 GLN CA CB sing N N 91 GLN CA HA sing N N 92 GLN C O doub N N 93 GLN C OXT sing N N 94 GLN CB CG sing N N 95 GLN CB HB2 sing N N 96 GLN CB HB3 sing N N 97 GLN CG CD sing N N 98 GLN CG HG2 sing N N 99 GLN CG HG3 sing N N 100 GLN CD OE1 doub N N 101 GLN CD NE2 sing N N 102 GLN NE2 HE21 sing N N 103 GLN NE2 HE22 sing N N 104 GLN OXT HXT sing N N 105 GLU N CA sing N N 106 GLU N H sing N N 107 GLU N H2 sing N N 108 GLU CA C sing N N 109 GLU CA CB sing N N 110 GLU CA HA sing N N 111 GLU C O doub N N 112 GLU C OXT sing N N 113 GLU CB CG sing N N 114 GLU CB HB2 sing N N 115 GLU CB HB3 sing N N 116 GLU CG CD sing N N 117 GLU CG HG2 sing N N 118 GLU CG HG3 sing N N 119 GLU CD OE1 doub N N 120 GLU CD OE2 sing N N 121 GLU OE2 HE2 sing N N 122 GLU OXT HXT sing N N 123 GLY N CA sing N N 124 GLY N H sing N N 125 GLY N H2 sing N N 126 GLY CA C sing N N 127 GLY CA HA2 sing N N 128 GLY CA HA3 sing N N 129 GLY C O doub N N 130 GLY C OXT sing N N 131 GLY OXT HXT sing N N 132 HIS N CA sing N N 133 HIS N H sing N N 134 HIS N H2 sing N N 135 HIS CA C sing N N 136 HIS CA CB sing N N 137 HIS CA HA sing N N 138 HIS C O doub N N 139 HIS C OXT sing N N 140 HIS CB CG sing N N 141 HIS CB HB2 sing N N 142 HIS CB HB3 sing N N 143 HIS CG ND1 sing Y N 144 HIS CG CD2 doub Y N 145 HIS ND1 CE1 doub Y N 146 HIS ND1 HD1 sing N N 147 HIS CD2 NE2 sing Y N 148 HIS CD2 HD2 sing N N 149 HIS CE1 NE2 sing Y N 150 HIS CE1 HE1 sing N N 151 HIS NE2 HE2 sing N N 152 HIS OXT HXT sing N N 153 HOH O H1 sing N N 154 HOH O H2 sing N N 155 ILE N CA sing N N 156 ILE N H sing N N 157 ILE N H2 sing N N 158 ILE CA C sing N N 159 ILE CA CB sing N N 160 ILE CA HA sing N N 161 ILE C O doub N N 162 ILE C OXT sing N N 163 ILE CB CG1 sing N N 164 ILE CB CG2 sing N N 165 ILE CB HB sing N N 166 ILE CG1 CD1 sing N N 167 ILE CG1 HG12 sing N N 168 ILE CG1 HG13 sing N N 169 ILE CG2 HG21 sing N N 170 ILE CG2 HG22 sing N N 171 ILE CG2 HG23 sing N N 172 ILE CD1 HD11 sing N N 173 ILE CD1 HD12 sing N N 174 ILE CD1 HD13 sing N N 175 ILE OXT HXT sing N N 176 LEU N CA sing N N 177 LEU N H sing N N 178 LEU N H2 sing N N 179 LEU CA C sing N N 180 LEU CA CB sing N N 181 LEU CA HA sing N N 182 LEU C O doub N N 183 LEU C OXT sing N N 184 LEU CB CG sing N N 185 LEU CB HB2 sing N N 186 LEU CB HB3 sing N N 187 LEU CG CD1 sing N N 188 LEU CG CD2 sing N N 189 LEU CG HG sing N N 190 LEU CD1 HD11 sing N N 191 LEU CD1 HD12 sing N N 192 LEU CD1 HD13 sing N N 193 LEU CD2 HD21 sing N N 194 LEU CD2 HD22 sing N N 195 LEU CD2 HD23 sing N N 196 LEU OXT HXT sing N N 197 LYS N CA sing N N 198 LYS N H sing N N 199 LYS N H2 sing N N 200 LYS CA C sing N N 201 LYS CA CB sing N N 202 LYS CA HA sing N N 203 LYS C O doub N N 204 LYS C OXT sing N N 205 LYS CB CG sing N N 206 LYS CB HB2 sing N N 207 LYS CB HB3 sing N N 208 LYS CG CD sing N N 209 LYS CG HG2 sing N N 210 LYS CG HG3 sing N N 211 LYS CD CE sing N N 212 LYS CD HD2 sing N N 213 LYS CD HD3 sing N N 214 LYS CE NZ sing N N 215 LYS CE HE2 sing N N 216 LYS CE HE3 sing N N 217 LYS NZ HZ1 sing N N 218 LYS NZ HZ2 sing N N 219 LYS NZ HZ3 sing N N 220 LYS OXT HXT sing N N 221 MET N CA sing N N 222 MET N H sing N N 223 MET N H2 sing N N 224 MET CA C sing N N 225 MET CA CB sing N N 226 MET CA HA sing N N 227 MET C O doub N N 228 MET C OXT sing N N 229 MET CB CG sing N N 230 MET CB HB2 sing N N 231 MET CB HB3 sing N N 232 MET CG SD sing N N 233 MET CG HG2 sing N N 234 MET CG HG3 sing N N 235 MET SD CE sing N N 236 MET CE HE1 sing N N 237 MET CE HE2 sing N N 238 MET CE HE3 sing N N 239 MET OXT HXT sing N N 240 PHE N CA sing N N 241 PHE N H sing N N 242 PHE N H2 sing N N 243 PHE CA C sing N N 244 PHE CA CB sing N N 245 PHE CA HA sing N N 246 PHE C O doub N N 247 PHE C OXT sing N N 248 PHE CB CG sing N N 249 PHE CB HB2 sing N N 250 PHE CB HB3 sing N N 251 PHE CG CD1 doub Y N 252 PHE CG CD2 sing Y N 253 PHE CD1 CE1 sing Y N 254 PHE CD1 HD1 sing N N 255 PHE CD2 CE2 doub Y N 256 PHE CD2 HD2 sing N N 257 PHE CE1 CZ doub Y N 258 PHE CE1 HE1 sing N N 259 PHE CE2 CZ sing Y N 260 PHE CE2 HE2 sing N N 261 PHE CZ HZ sing N N 262 PHE OXT HXT sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 SER N CA sing N N 281 SER N H sing N N 282 SER N H2 sing N N 283 SER CA C sing N N 284 SER CA CB sing N N 285 SER CA HA sing N N 286 SER C O doub N N 287 SER C OXT sing N N 288 SER CB OG sing N N 289 SER CB HB2 sing N N 290 SER CB HB3 sing N N 291 SER OG HG sing N N 292 SER OXT HXT sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # _atom_sites.entry_id 1KGD _atom_sites.fract_transf_matrix[1][1] 0.014216 _atom_sites.fract_transf_matrix[1][2] 0.008208 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016416 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013358 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_