data_1KIS # _entry.id 1KIS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.313 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1KIS WWPDB D_1000174442 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KIS _pdbx_database_status.recvd_initial_deposition_date 1997-06-11 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chang, K.Y.' 1 ? 'Tinoco Jr, I.' 2 ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;The structure of an RNA "kissing" hairpin complex of the HIV TAR hairpin loop and its complement. ; J.Mol.Biol. 269 52 66 1997 JMOBAK UK 0022-2836 0070 ? 9193000 10.1006/jmbi.1997.1021 1 ;Characterization of a "Kissing" Hairpin Complex Derived from the Human Immunodeficiency Virus Genome ; Proc.Natl.Acad.Sci.USA 91 8705 ? 1994 PNASA6 US 0027-8424 0040 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chang, K.Y.' 1 ? primary 'Tinoco Jr., I.' 2 ? 1 'Chang, K.Y.' 3 ? 1 'Tinoco Jr, I.' 4 ? # _cell.entry_id 1KIS _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KIS _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*GP*AP*GP*CP*CP*CP*UP*GP*GP*GP*AP*GP*GP*CP*UP*C)-3') ; 5168.135 1 ? ? 'TRANSCRIPTIONAL ACTIVATION RESPONSE (TAR) REGION' ? 2 polymer syn ;RNA (5'-R(*GP*CP*UP*GP*UP*UP*CP*CP*CP*AP*GP*AP*CP*AP*GP*C)-3') ; 5073.071 1 ? ? 'COMPLEMENTARY LOOP SEQUENCE (TAR*) REGION' ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GAGCCCUGGGAGGCUC GAGCCCUGGGAGGCUC A ? 2 polyribonucleotide no no GCUGUUCCCAGACAGC GCUGUUCCCAGACAGC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 G n 1 4 C n 1 5 C n 1 6 C n 1 7 U n 1 8 G n 1 9 G n 1 10 G n 1 11 A n 1 12 G n 1 13 G n 1 14 C n 1 15 U n 1 16 C n 2 1 G n 2 2 C n 2 3 U n 2 4 G n 2 5 U n 2 6 U n 2 7 C n 2 8 C n 2 9 C n 2 10 A n 2 11 G n 2 12 A n 2 13 C n 2 14 A n 2 15 G n 2 16 C n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'synthetic construct' ? 32630 'THE OLIGONUCLEOTIDES WERE SYNTHESIZED ENZYMATICALLY.' 2 1 sample ? ? 'synthetic construct' ? 32630 'THE OLIGONUCLEOTIDES WERE SYNTHESIZED ENZYMATICALLY.' # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1KIS 1KIS ? ? ? 2 2 PDB 1KIS 1KIS ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1KIS A 1 ? 16 ? 1KIS 1 ? 16 ? 1 16 2 2 1KIS B 1 ? 16 ? 1KIS 17 ? 32 ? 17 32 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 OMEGA GE 500 ? 2 AMX Bruker 600 ? # _pdbx_nmr_refine.entry_id 1KIS _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'simulated annealing-restrained molecular dynamics protocol followed by an energy minimization step' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1KIS _pdbx_nmr_ensemble.conformers_calculated_total_number 17 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 1KIS _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_software.classification refinement _pdbx_nmr_software.name X-PLOR _pdbx_nmr_software.version 3.1 _pdbx_nmr_software.authors BRUNGER _pdbx_nmr_software.ordinal 1 # _exptl.entry_id 1KIS _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1KIS _struct.title ;TAR-TAR "KISSING" HAIRPIN COMPLEX DERIVED FROM THE HIV GENOME, NMR, 1 STRUCTURE ; _struct.pdbx_descriptor ;5'-R(*GP*AP*GP*CP*CP*CP*UP*GP*GP*GP*AP*GP*GP*CP*UP*C)-3', 5'-R(*GP*CP*UP*GP*UP*UP*CP*CP*CP*AP*GP*AP*CP*AP*GP*C)-3' ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KIS _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RIBONUCLEIC ACID, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 16 N3 ? ? A G 1 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 16 O2 ? ? A G 1 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 16 N4 ? ? A G 1 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 A U 15 N3 ? ? A A 2 A U 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 A U 15 O4 ? ? A A 2 A U 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 14 N3 ? ? A G 3 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 14 O2 ? ? A G 3 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 14 N4 ? ? A G 3 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 12 N1 ? ? A C 5 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 12 O6 ? ? A C 5 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 12 N2 ? ? A C 5 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 11 N1 ? ? A C 6 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 11 O6 ? ? A C 6 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 11 N2 ? ? A C 6 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A U 7 N3 ? ? ? 1_555 B A 10 N1 ? ? A U 7 B A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A U 7 O4 ? ? ? 1_555 B A 10 N6 ? ? A U 7 B A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 8 B C 24 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog21 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 9 N3 ? ? A G 8 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 9 O2 ? ? A G 8 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 9 N4 ? ? A G 8 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A G 9 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 9 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A G 9 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 9 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? A G 9 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 9 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 7 N3 ? ? A G 10 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 7 O2 ? ? A G 10 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 7 N4 ? ? A G 10 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? A A 11 N1 ? ? ? 1_555 B U 6 N3 ? ? A A 11 B U 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? A A 11 N6 ? ? ? 1_555 B U 6 O4 ? ? A A 11 B U 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 16 N3 ? ? B G 17 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 16 O2 ? ? B G 17 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 16 N4 ? ? B G 17 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? B C 2 N3 ? ? ? 1_555 B G 15 N1 ? ? B C 18 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? B C 2 N4 ? ? ? 1_555 B G 15 O6 ? ? B C 18 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? B C 2 O2 ? ? ? 1_555 B G 15 N2 ? ? B C 18 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? B U 3 N3 ? ? ? 1_555 B A 14 N1 ? ? B U 19 B A 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? B U 3 O4 ? ? ? 1_555 B A 14 N6 ? ? B U 19 B A 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 13 N3 ? ? B G 20 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog41 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 13 O2 ? ? B G 20 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog42 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 13 N4 ? ? B G 20 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog43 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 12 N1 ? ? B U 21 B A 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog44 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 12 N6 ? ? B U 21 B A 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1KIS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KIS _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 A 2 2 2 A A A . n A 1 3 G 3 3 3 G G A . n A 1 4 C 4 4 4 C C A . n A 1 5 C 5 5 5 C C A . n A 1 6 C 6 6 6 C C A . n A 1 7 U 7 7 7 U U A . n A 1 8 G 8 8 8 G G A . n A 1 9 G 9 9 9 G G A . n A 1 10 G 10 10 10 G G A . n A 1 11 A 11 11 11 A A A . n A 1 12 G 12 12 12 G G A . n A 1 13 G 13 13 13 G G A . n A 1 14 C 14 14 14 C C A . n A 1 15 U 15 15 15 U U A . n A 1 16 C 16 16 16 C C A . n B 2 1 G 1 17 17 G G B . n B 2 2 C 2 18 18 C C B . n B 2 3 U 3 19 19 U U B . n B 2 4 G 4 20 20 G G B . n B 2 5 U 5 21 21 U U B . n B 2 6 U 6 22 22 U U B . n B 2 7 C 7 23 23 C C B . n B 2 8 C 8 24 24 C C B . n B 2 9 C 9 25 25 C C B . n B 2 10 A 10 26 26 A A B . n B 2 11 G 11 27 27 G G B . n B 2 12 A 12 28 28 A A B . n B 2 13 C 13 29 29 C C B . n B 2 14 A 14 30 30 A A B . n B 2 15 G 15 31 31 G G B . n B 2 16 C 16 32 32 C C B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 850 ? 1 MORE -3 ? 1 'SSA (A^2)' 5990 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-10-15 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-08-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' 8 4 'Structure model' 'Source and taxonomy' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' citation_author 3 4 'Structure model' entity 4 4 'Structure model' ndb_struct_conf_na 5 4 'Structure model' ndb_struct_na_base_pair 6 4 'Structure model' ndb_struct_na_base_pair_step 7 4 'Structure model' pdbx_database_status 8 4 'Structure model' pdbx_entity_src_syn 9 4 'Structure model' pdbx_nmr_ensemble 10 4 'Structure model' pdbx_nmr_refine 11 4 'Structure model' pdbx_nmr_representative 12 4 'Structure model' pdbx_nmr_spectrometer 13 4 'Structure model' pdbx_struct_assembly 14 4 'Structure model' pdbx_struct_assembly_prop 15 4 'Structure model' pdbx_struct_oper_list 16 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.name' 2 4 'Structure model' '_citation_author.name' 3 4 'Structure model' '_entity.details' 4 4 'Structure model' '_entity.pdbx_fragment' 5 4 'Structure model' '_ndb_struct_conf_na.feature' 6 4 'Structure model' '_pdbx_database_status.process_site' 7 4 'Structure model' '_pdbx_entity_src_syn.details' 8 4 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 9 4 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 10 4 'Structure model' '_pdbx_nmr_ensemble.conformer_selection_criteria' 11 4 'Structure model' '_pdbx_nmr_refine.details' 12 4 'Structure model' '_pdbx_nmr_refine.method' 13 4 'Structure model' '_pdbx_nmr_spectrometer.field_strength' 14 4 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 X-PLOR phasing 3.1 ? 3 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1KIS 'double helix' 1KIS 'a-form double helix' 1KIS 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 16 1_555 -0.085 -0.138 0.755 -23.917 -8.368 -5.982 1 A_G1:C16_A A 1 ? A 16 ? 19 1 1 A A 2 1_555 A U 15 1_555 0.316 -0.111 1.238 3.144 8.371 -4.184 2 A_A2:U15_A A 2 ? A 15 ? 20 1 1 A G 3 1_555 A C 14 1_555 -0.091 -0.304 -1.031 20.745 1.056 -1.525 3 A_G3:C14_A A 3 ? A 14 ? 19 1 1 A C 4 1_555 A G 13 1_555 -0.300 -1.171 1.921 5.964 -0.668 -7.842 4 A_C4:G13_A A 4 ? A 13 ? 19 1 1 A C 5 1_555 A G 12 1_555 -0.052 -0.590 1.458 11.513 -3.715 -7.576 5 A_C5:G12_A A 5 ? A 12 ? 19 1 1 B U 6 1_555 A A 11 1_555 -0.512 -0.005 -1.194 26.961 -24.863 -0.751 6 B_U22:A11_A B 22 ? A 11 ? 20 1 1 B C 7 1_555 A G 10 1_555 -0.055 -1.323 2.077 -0.001 3.078 -2.114 7 B_C23:G10_A B 23 ? A 10 ? 19 1 1 B C 8 1_555 A G 9 1_555 -0.447 -1.134 2.020 -1.365 3.423 -6.085 8 B_C24:G9_A B 24 ? A 9 ? 19 1 1 B C 9 1_555 A G 8 1_555 -0.341 -0.921 2.129 -13.415 5.557 -8.078 9 B_C25:G8_A B 25 ? A 8 ? 19 1 1 B A 10 1_555 A U 7 1_555 0.633 -0.954 2.137 15.052 -0.805 -11.280 10 B_A26:U7_A B 26 ? A 7 ? 20 1 1 B G 11 1_555 A C 6 1_555 -0.517 -0.145 0.150 -13.517 -37.995 -6.130 11 B_G27:C6_A B 27 ? A 6 ? 19 1 1 B A 12 1_555 B U 5 1_555 0.469 0.089 -1.049 -30.909 -25.495 -2.814 12 B_A28:U21_B B 28 ? B 21 ? 20 1 1 B C 13 1_555 B G 4 1_555 0.026 0.131 -0.040 -1.661 -2.919 -6.607 13 B_C29:G20_B B 29 ? B 20 ? 19 1 1 B A 14 1_555 B U 3 1_555 0.515 0.327 0.560 38.041 -6.078 -6.435 14 B_A30:U19_B B 30 ? B 19 ? 20 1 1 B G 15 1_555 B C 2 1_555 -0.213 -0.725 -1.396 19.472 -4.743 6.861 15 B_G31:C18_B B 31 ? B 18 ? 19 1 1 B C 16 1_555 B G 1 1_555 0.064 -0.056 0.888 1.499 1.155 -5.715 16 B_C32:G17_B B 32 ? B 17 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 16 1_555 A A 2 1_555 A U 15 1_555 -0.832 -1.400 2.606 -3.762 3.214 33.557 -2.808 0.949 2.540 5.529 6.472 33.909 1 AA_G1A2:U15C16_AA A 1 ? A 16 ? A 2 ? A 15 ? 1 A A 2 1_555 A U 15 1_555 A G 3 1_555 A C 14 1_555 -0.145 -1.006 3.518 11.119 5.974 26.997 -3.259 2.702 2.947 12.000 -22.333 29.752 2 AA_A2G3:C14U15_AA A 2 ? A 15 ? A 3 ? A 14 ? 1 A G 3 1_555 A C 14 1_555 A C 4 1_555 A G 13 1_555 -0.605 -1.062 4.400 -14.916 31.179 34.142 -4.462 -0.772 2.678 42.094 20.138 48.213 3 AA_G3C4:G13C14_AA A 3 ? A 14 ? A 4 ? A 13 ? 1 A C 4 1_555 A G 13 1_555 A C 5 1_555 A G 12 1_555 0.504 -1.734 3.258 3.642 14.705 35.070 -4.341 -0.355 2.405 23.116 -5.726 38.108 4 AA_C4C5:G12G13_AA A 4 ? A 13 ? A 5 ? A 12 ? 1 A C 5 1_555 A G 12 1_555 B U 6 1_555 A A 11 1_555 -0.938 -0.551 3.297 12.866 -21.623 39.316 1.172 2.304 2.812 -28.841 -17.161 46.408 5 AB_C5U22:A11G12_AA A 5 ? A 12 ? B 22 ? A 11 ? 1 B U 6 1_555 A A 11 1_555 B C 7 1_555 A G 10 1_555 -0.336 -1.522 4.638 -22.655 10.770 40.912 -3.095 -2.137 3.832 13.944 29.333 47.707 6 BB_U22C23:G10A11_AA B 22 ? A 11 ? B 23 ? A 10 ? 1 B C 7 1_555 A G 10 1_555 B C 8 1_555 A G 9 1_555 0.315 -0.966 4.075 -1.813 10.036 23.719 -5.492 -1.307 3.360 23.096 4.172 25.790 7 BB_C23C24:G9G10_AA B 23 ? A 10 ? B 24 ? A 9 ? 1 B C 8 1_555 A G 9 1_555 B C 9 1_555 A G 8 1_555 0.414 -2.147 3.602 -1.678 27.089 45.781 -4.069 -0.568 2.095 31.761 1.967 52.847 8 BB_C24C25:G8G9_AA B 24 ? A 9 ? B 25 ? A 8 ? 1 B C 9 1_555 A G 8 1_555 B A 10 1_555 A U 7 1_555 0.537 -2.129 1.955 -0.069 5.678 32.685 -4.249 -0.946 1.572 9.995 0.122 33.162 9 BB_C25A26:U7G8_AA B 25 ? A 8 ? B 26 ? A 7 ? 1 B A 10 1_555 A U 7 1_555 B G 11 1_555 A C 6 1_555 0.668 -1.963 3.799 16.150 11.874 41.551 -3.674 0.720 3.192 15.688 -21.338 45.940 10 BB_A26G27:C6U7_AA B 26 ? A 7 ? B 27 ? A 6 ? 1 B G 11 1_555 A C 6 1_555 B A 12 1_555 B U 5 1_555 1.371 0.689 3.722 7.351 4.876 58.197 0.407 -0.952 3.896 4.981 -7.510 58.804 11 BB_G27A28:U21C6_BA B 27 ? A 6 ? B 28 ? B 21 ? 1 B A 12 1_555 B U 5 1_555 B C 13 1_555 B G 4 1_555 -0.526 -0.454 2.407 -7.005 9.489 25.484 -2.582 -0.129 2.169 20.189 14.904 28.040 12 BB_A28C29:G20U21_BB B 28 ? B 21 ? B 29 ? B 20 ? 1 B C 13 1_555 B G 4 1_555 B A 14 1_555 B U 3 1_555 0.683 -0.655 2.220 -3.696 3.396 30.314 -1.673 -1.765 2.041 6.439 7.006 30.717 13 BB_C29A30:U19G20_BB B 29 ? B 20 ? B 30 ? B 19 ? 1 B A 14 1_555 B U 3 1_555 B G 15 1_555 B C 2 1_555 1.120 -0.869 5.152 8.548 -0.502 29.376 -1.487 0.633 5.275 -0.964 -16.422 30.572 14 BB_A30G31:C18U19_BB B 30 ? B 19 ? B 31 ? B 18 ? 1 B G 15 1_555 B C 2 1_555 B C 16 1_555 B G 1 1_555 -0.554 -2.007 4.277 -8.178 11.902 32.836 -5.372 -0.546 3.408 19.898 13.674 35.791 15 BB_G31C32:G17C18_BB B 31 ? B 18 ? B 32 ? B 17 ? #