HEADER SIGNALING PROTEIN 17-DEC-01 1KMQ TITLE CRYSTAL STRUCTURE OF A CONSTITUTIVELY ACTIVATED RHOA MUTANT (Q63L) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSFORMING PROTEIN RHOA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H12; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GTPASE, CONSTITUTIVE MUTANT, GTP-ANALOG, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.LONGENECKER,P.READ,S.-K.LIN,A.P.SOMLYO,R.K.NAKAMOTO,Z.S.DEREWENDA REVDAT 4 14-FEB-24 1KMQ 1 REMARK REVDAT 3 27-OCT-21 1KMQ 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1KMQ 1 VERSN REVDAT 1 06-MAY-03 1KMQ 0 JRNL AUTH K.LONGENECKER,P.READ,S.K.LIN,A.P.SOMLYO,R.K.NAKAMOTO, JRNL AUTH 2 Z.S.DEREWENDA JRNL TITL STRUCTURE OF A CONSTITUTIVELY ACTIVATED RHOA MUTANT (Q63L) JRNL TITL 2 AT 1.55 A RESOLUTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 59 876 2003 JRNL REFN ISSN 0907-4449 JRNL PMID 12777804 JRNL DOI 10.1107/S0907444903005390 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 29355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1562 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1832 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1570 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.1910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.90000 REMARK 3 B22 (A**2) : 0.25000 REMARK 3 B33 (A**2) : 0.65000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.086 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.072 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.121 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1459 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1301 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1980 ; 2.343 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3037 ; 1.247 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 176 ; 5.096 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 274 ;15.687 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 218 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1575 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 269 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 304 ; 0.236 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1283 ; 0.189 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 160 ; 0.189 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 4 ; 0.266 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 6 ; 0.248 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 20 ; 0.173 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 30 ; 0.171 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 885 ; 2.697 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1432 ; 3.947 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 574 ; 3.489 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 548 ; 5.293 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1459 ; 1.708 ; 2.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 212 ; 3.578 ; 2.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1430 ; 2.884 ; 2.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KMQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-DEC-01. REMARK 100 THE DEPOSITION ID IS D_1000015117. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9671 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30966 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03600 REMARK 200 FOR THE DATA SET : 18.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.28000 REMARK 200 FOR SHELL : 5.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, HEPES, DIOXANE, MAGNESIUM REMARK 280 CHLORIDE, 2-MERCAPTOETHANOL, PH 6.9, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 282K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 30.29050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.29050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.67000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 PRO A 3 REMARK 465 ALA A 181 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 26 OG REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 ASP A 28 CG OD1 OD2 REMARK 470 GLN A 29 CG CD OE1 NE2 REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 VAL A 33 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 457 O HOH A 575 1.83 REMARK 500 O HOH A 494 O HOH A 595 1.99 REMARK 500 NH1 ARG A 5 O HOH A 589 2.04 REMARK 500 NH2 ARG A 150 O HOH A 528 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 34 N - CA - CB ANGL. DEV. = 11.1 DEGREES REMARK 500 ASP A 49 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 65 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 70 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 70 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 GLU A 97 OE1 - CD - OE2 ANGL. DEV. = 7.7 DEGREES REMARK 500 LYS A 164 CD - CE - NZ ANGL. DEV. = 16.0 DEGREES REMARK 500 ARG A 168 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 27 -2.18 -140.93 REMARK 500 ASP A 28 -11.34 67.07 REMARK 500 VAL A 38 -71.73 -96.47 REMARK 500 LYS A 98 -39.89 -135.61 REMARK 500 LYS A 164 -3.33 84.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 19 OG1 REMARK 620 2 THR A 37 OG1 83.7 REMARK 620 3 GNP A 300 O3G 174.3 90.8 REMARK 620 4 GNP A 300 O2B 91.7 174.0 93.9 REMARK 620 5 HOH A 551 O 89.6 87.7 91.9 88.4 REMARK 620 6 HOH A 578 O 86.6 91.0 91.7 92.6 176.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 94 OD1 REMARK 620 2 GLU A 97 OE1 88.2 REMARK 620 3 HOH A 409 O 89.7 89.3 REMARK 620 4 HOH A 410 O 91.2 179.2 90.2 REMARK 620 5 HOH A 412 O 90.9 93.2 177.5 87.3 REMARK 620 6 HOH A 424 O 178.0 92.0 92.3 88.6 87.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DIO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DIO A 302 DBREF 1KMQ A 4 181 UNP P61586 RHOA_HUMAN 4 181 SEQADV 1KMQ GLY A -2 UNP P61586 CLONING ARTIFACT SEQADV 1KMQ ALA A -1 UNP P61586 CLONING ARTIFACT SEQADV 1KMQ MET A 0 UNP P61586 CLONING ARTIFACT SEQADV 1KMQ GLY A 1 UNP P61586 CLONING ARTIFACT SEQADV 1KMQ SER A 2 UNP P61586 CLONING ARTIFACT SEQADV 1KMQ PRO A 3 UNP P61586 CLONING ARTIFACT SEQADV 1KMQ ASN A 25 UNP P61586 PHE 25 ENGINEERED MUTATION SEQADV 1KMQ LEU A 63 UNP P61586 GLN 63 ENGINEERED MUTATION SEQRES 1 A 184 GLY ALA MET GLY SER PRO ILE ARG LYS LYS LEU VAL ILE SEQRES 2 A 184 VAL GLY ASP GLY ALA CYS GLY LYS THR CYS LEU LEU ILE SEQRES 3 A 184 VAL ASN SER LYS ASP GLN PHE PRO GLU VAL TYR VAL PRO SEQRES 4 A 184 THR VAL PHE GLU ASN TYR VAL ALA ASP ILE GLU VAL ASP SEQRES 5 A 184 GLY LYS GLN VAL GLU LEU ALA LEU TRP ASP THR ALA GLY SEQRES 6 A 184 LEU GLU ASP TYR ASP ARG LEU ARG PRO LEU SER TYR PRO SEQRES 7 A 184 ASP THR ASP VAL ILE LEU MET CYS PHE SER ILE ASP SER SEQRES 8 A 184 PRO ASP SER LEU GLU ASN ILE PRO GLU LYS TRP THR PRO SEQRES 9 A 184 GLU VAL LYS HIS PHE CYS PRO ASN VAL PRO ILE ILE LEU SEQRES 10 A 184 VAL GLY ASN LYS LYS ASP LEU ARG ASN ASP GLU HIS THR SEQRES 11 A 184 ARG ARG GLU LEU ALA LYS MET LYS GLN GLU PRO VAL LYS SEQRES 12 A 184 PRO GLU GLU GLY ARG ASP MET ALA ASN ARG ILE GLY ALA SEQRES 13 A 184 PHE GLY TYR MET GLU CYS SER ALA LYS THR LYS ASP GLY SEQRES 14 A 184 VAL ARG GLU VAL PHE GLU MET ALA THR ARG ALA ALA LEU SEQRES 15 A 184 GLN ALA HET MG A 401 1 HET MG A 402 1 HET GNP A 300 32 HET DIO A 301 6 HET DIO A 302 6 HETNAM MG MAGNESIUM ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM DIO 1,4-DIETHYLENE DIOXIDE FORMUL 2 MG 2(MG 2+) FORMUL 4 GNP C10 H17 N6 O13 P3 FORMUL 5 DIO 2(C4 H8 O2) FORMUL 7 HOH *210(H2 O) HELIX 1 1 GLY A 17 ASP A 28 1 12 HELIX 2 2 LEU A 63 ASP A 67 5 5 HELIX 3 3 LEU A 69 TYR A 74 5 6 HELIX 4 4 SER A 88 LYS A 98 1 11 HELIX 5 5 LYS A 98 CYS A 107 1 10 HELIX 6 6 LYS A 118 ARG A 122 5 5 HELIX 7 7 ASP A 124 MET A 134 1 11 HELIX 8 8 LYS A 140 ILE A 151 1 12 HELIX 9 9 GLY A 166 GLN A 180 1 15 SHEET 1 A 6 PHE A 39 VAL A 48 0 SHEET 2 A 6 LYS A 51 THR A 60 -1 O LEU A 55 N ALA A 44 SHEET 3 A 6 ARG A 5 GLY A 12 1 N LEU A 8 O ALA A 56 SHEET 4 A 6 VAL A 79 SER A 85 1 O CYS A 83 N VAL A 11 SHEET 5 A 6 ILE A 112 ASN A 117 1 O ASN A 117 N PHE A 84 SHEET 6 A 6 GLY A 155 GLU A 158 1 O MET A 157 N GLY A 116 LINK OG1 THR A 19 MG MG A 401 1555 1555 2.09 LINK OG1 THR A 37 MG MG A 401 1555 1555 2.10 LINK OD1 ASN A 94 MG MG A 402 1555 1555 2.09 LINK OE1 GLU A 97 MG MG A 402 1555 1555 2.02 LINK O3G GNP A 300 MG MG A 401 1555 1555 1.96 LINK O2B GNP A 300 MG MG A 401 1555 1555 2.04 LINK MG MG A 401 O HOH A 551 1555 1555 2.15 LINK MG MG A 401 O HOH A 578 1555 1555 2.06 LINK MG MG A 402 O HOH A 409 1555 1555 2.07 LINK MG MG A 402 O HOH A 410 1555 1555 2.12 LINK MG MG A 402 O HOH A 412 1555 4455 2.04 LINK MG MG A 402 O HOH A 424 1555 4455 2.05 SITE 1 AC1 5 THR A 19 THR A 37 GNP A 300 HOH A 551 SITE 2 AC1 5 HOH A 578 SITE 1 AC2 6 ASN A 94 GLU A 97 HOH A 409 HOH A 410 SITE 2 AC2 6 HOH A 412 HOH A 424 SITE 1 AC3 27 GLY A 14 ALA A 15 CYS A 16 GLY A 17 SITE 2 AC3 27 LYS A 18 THR A 19 CYS A 20 TYR A 34 SITE 3 AC3 27 PRO A 36 THR A 37 GLY A 62 LYS A 118 SITE 4 AC3 27 ASP A 120 LEU A 121 SER A 160 ALA A 161 SITE 5 AC3 27 LYS A 162 MG A 401 HOH A 406 HOH A 408 SITE 6 AC3 27 HOH A 428 HOH A 438 HOH A 451 HOH A 480 SITE 7 AC3 27 HOH A 517 HOH A 551 HOH A 578 SITE 1 AC4 6 ALA A 148 ASN A 149 ALA A 153 GLY A 155 SITE 2 AC4 6 TYR A 156 HOH A 573 SITE 1 AC5 5 TRP A 58 LEU A 72 SER A 73 HOH A 444 SITE 2 AC5 5 HOH A 586 CRYST1 60.581 73.340 48.041 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016507 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013635 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020816 0.00000