HEADER DNA BINDING PROTEIN 18-DEC-01 1KN5 TITLE SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FROM SACCHAROMYCES TITLE 2 CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION REGULATORY PROTEIN ADR6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ARID DOMAIN; COMPND 5 SYNONYM: TRANSCRIPTION REGULATORY PROTEIN SWI1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: ADR6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PREP-4 KEYWDS ADR6, ARID DOMAIN, DNA-BINDING, DNA BINDING PROTEIN EXPDTA SOLUTION NMR MDLTYP MINIMIZED AVERAGE AUTHOR X.TU,J.WU,Y.XU,Y.SHI REVDAT 5 29-MAY-24 1KN5 1 REMARK REVDAT 4 23-FEB-22 1KN5 1 REMARK SEQADV REVDAT 3 24-FEB-09 1KN5 1 VERSN REVDAT 2 04-DEC-02 1KN5 1 REMARK REVDAT 1 17-JUL-02 1KN5 0 JRNL AUTH X.TU,J.WU,Y.XU,Y.SHI JRNL TITL 1H, 13C AND 15N RESONANCE ASSIGNMENTS AND SECONDARY JRNL TITL 2 STRUCTURE OF ADR6 DNA-BINDING DOMAIN. JRNL REF J.BIOMOL.NMR V. 21 187 2001 JRNL REFN ISSN 0925-2738 JRNL PMID 11727987 JRNL DOI 10.1023/A:1012434510376 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.TU,J.WU,Y.XU,Y.SHI REMARK 1 TITL 1H, 13C AND 15N RESONANCE ASSIGNMENTS AND SECONDARY REMARK 1 TITL 2 STRUCTURE OF ADR6 DNA-BINDING DOMAIN REMARK 1 REF J.BIOMOL.NMR V. 21 187 2001 REMARK 1 REFN ISSN 0925-2738 REMARK 1 DOI 10.1023/A:1012434510376 REMARK 1 REFERENCE 2 REMARK 1 AUTH X.TU,Y.XIAO,W.ZENG,Y.SHI REMARK 1 TITL EXPRESSION AND PURIFICATION OF A RECOMBINANT DNA-BINDING REMARK 1 TITL 2 DOMAIN OF ADR6 PROTEIN FROM ESCHERICHIA COLI AND ITS REMARK 1 TITL 3 SECONDARY STRUCTURE CHARACTERIZATION REMARK 1 REF BIOCHIM.BIOPHYS.ACTA V.1481 167 2000 REMARK 1 REFN ISSN 0006-3002 REMARK 1 DOI 10.1016/S0167-4838(00)00095-9 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS V 1.0 REMARK 3 AUTHORS : A.T. BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KN5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-DEC-01. REMARK 100 THE DEPOSITION ID IS D_1000015132. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 4.9 REMARK 210 IONIC STRENGTH : 50MM PHOSPHATE BUFFER REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM ADR6 ARID DOMAIN U-15N, U REMARK 210 -13C, 50MM PHOSPHATE BUFFER REMARK 210 PH4.9, 90% H2O, 10%D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 LEU A 105 REMARK 465 GLN A 106 REMARK 465 PRO A 107 REMARK 465 SER A 108 REMARK 465 LEU A 109 REMARK 465 ILE A 110 REMARK 465 SER A 111 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB VAL A 45 HZ3 TRP A 60 1.28 REMARK 500 O VAL A 45 H PHE A 48 1.54 REMARK 500 O ALA A 51 H THR A 55 1.55 REMARK 500 HG13 ILE A 78 N TYR A 79 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 9 -73.32 -69.94 REMARK 500 LEU A 25 -41.97 179.43 REMARK 500 SER A 27 137.59 164.72 REMARK 500 PRO A 29 64.18 -68.20 REMARK 500 GLU A 30 81.74 -48.84 REMARK 500 ASN A 33 31.99 168.98 REMARK 500 ARG A 34 -168.88 171.88 REMARK 500 LEU A 38 -79.31 -38.54 REMARK 500 TYR A 40 -80.67 -66.50 REMARK 500 GLN A 46 -31.93 -39.85 REMARK 500 VAL A 63 -72.71 -60.05 REMARK 500 TYR A 72 -29.19 -36.62 REMARK 500 LEU A 83 56.08 -159.40 REMARK 500 ILE A 91 -46.80 -143.65 REMARK 500 GLN A 93 -44.77 -179.75 REMARK 500 ILE A 96 32.61 36.97 REMARK 500 LYS A 97 16.09 -154.33 REMARK 500 GLU A 98 -59.99 -141.38 REMARK 500 THR A 99 -79.67 -80.95 REMARK 500 LYS A 102 66.18 38.28 REMARK 500 ARG A 103 -62.24 70.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KKX RELATED DB: PDB REMARK 900 1KKX IS THE ENSEMBLE OF 10 STRUCTURES. REMARK 900 RELATED ID: 5061 RELATED DB: BMRB REMARK 900 5061 IS CHEMICAL_SHIFTS FOR THIS PROTEIN. DBREF 1KN5 A 3 104 UNP P09547 SWI1_YEAST 405 506 SEQADV 1KN5 MET A -11 UNP P09547 EXPRESSION TAG SEQADV 1KN5 ARG A -10 UNP P09547 EXPRESSION TAG SEQADV 1KN5 GLY A -9 UNP P09547 EXPRESSION TAG SEQADV 1KN5 SER A -8 UNP P09547 EXPRESSION TAG SEQADV 1KN5 GLY A -7 UNP P09547 EXPRESSION TAG SEQADV 1KN5 SER A -6 UNP P09547 EXPRESSION TAG SEQADV 1KN5 HIS A -5 UNP P09547 EXPRESSION TAG SEQADV 1KN5 HIS A -4 UNP P09547 EXPRESSION TAG SEQADV 1KN5 HIS A -3 UNP P09547 EXPRESSION TAG SEQADV 1KN5 HIS A -2 UNP P09547 EXPRESSION TAG SEQADV 1KN5 HIS A -1 UNP P09547 EXPRESSION TAG SEQADV 1KN5 HIS A 0 UNP P09547 EXPRESSION TAG SEQADV 1KN5 GLY A 1 UNP P09547 EXPRESSION TAG SEQADV 1KN5 SER A 2 UNP P09547 EXPRESSION TAG SEQADV 1KN5 LEU A 105 UNP P09547 CLONING ARTIFACT SEQADV 1KN5 GLN A 106 UNP P09547 CLONING ARTIFACT SEQADV 1KN5 PRO A 107 UNP P09547 CLONING ARTIFACT SEQADV 1KN5 SER A 108 UNP P09547 CLONING ARTIFACT SEQADV 1KN5 LEU A 109 UNP P09547 CLONING ARTIFACT SEQADV 1KN5 ILE A 110 UNP P09547 CLONING ARTIFACT SEQADV 1KN5 SER A 111 UNP P09547 CLONING ARTIFACT SEQRES 1 A 123 MET ARG GLY SER GLY SER HIS HIS HIS HIS HIS HIS GLY SEQRES 2 A 123 SER ASN ASN LYS GLN TYR GLU LEU PHE MET LYS SER LEU SEQRES 3 A 123 ILE GLU ASN CYS LYS LYS ARG ASN MET PRO LEU GLN SER SEQRES 4 A 123 ILE PRO GLU ILE GLY ASN ARG LYS ILE ASN LEU PHE TYR SEQRES 5 A 123 LEU TYR MET LEU VAL GLN LYS PHE GLY GLY ALA ASP GLN SEQRES 6 A 123 VAL THR ARG THR GLN GLN TRP SER MET VAL ALA GLN ARG SEQRES 7 A 123 LEU GLN ILE SER ASP TYR GLN GLN LEU GLU SER ILE TYR SEQRES 8 A 123 PHE ARG ILE LEU LEU PRO TYR GLU ARG HIS MET ILE SER SEQRES 9 A 123 GLN GLU GLY ILE LYS GLU THR GLN ALA LYS ARG ILE LEU SEQRES 10 A 123 GLN PRO SER LEU ILE SER HELIX 1 1 LYS A 5 ARG A 21 1 17 HELIX 2 2 ASN A 37 GLN A 46 1 10 HELIX 3 3 GLY A 50 THR A 55 1 6 HELIX 4 4 GLN A 58 LEU A 67 1 10 HELIX 5 5 ASP A 71 MET A 90 1 20 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000