data_1KNG # _entry.id 1KNG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1KNG RCSB RCSB015142 WWPDB D_1000015142 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KNG _pdbx_database_status.recvd_initial_deposition_date 2001-12-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Edeling, M.A.' 1 'Guddat, L.W.' 2 'Fabianek, R.A.' 3 'Thony-Meyer, L.' 4 'Martin, J.L.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of CcmG/DsbE at 1.14 A resolution: high-fidelity reducing activity in an indiscriminately oxidizing environment' Structure 10 973 979 2002 STRUE6 UK 0969-2126 2005 ? 12121652 '10.1016/S0969-2126(02)00794-3' 1 'Crystallization and preliminary diffraction studies of native and selenomethionine CcmG (CycY, DsbE)' 'Acta Crystallogr.,Sect.D' 57 1293 1295 2001 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444901009982 2 ;Characterization of the Bradyrhizobium japonicum CycY protein, a membrane-anchored periplasmic thioredoxin that may play a role as a reductant in the biogenesis of c-type cytochromes ; J.Biol.Chem. 272 4467 4473 1997 JBCHA3 US 0021-9258 0071 ? ? 10.1074/jbc.272.7.4467 3 ;The active-site cysteines of the periplasmic thioredoxin-like protein CcmG of Escherichia coli are important but not essential for cytochrome c maturation in vivo. ; J.BACTERIOL. 180 1947 1950 1998 JOBAAY US 0021-9193 0767 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Edeling, M.A.' 1 primary 'Guddat, L.W.' 2 primary 'Fabianek, R.A.' 3 primary 'Thony-Meyer, L.' 4 primary 'Martin, J.L.' 5 1 'Edeling, M.A.' 6 1 'Guddat, L.W.' 7 1 'Fabianek, R.A.' 8 1 'Halliday, J.A.' 9 1 'Jones, A.' 10 1 'Thony-Meyer, L.' 11 1 'Martin, J.L.' 12 2 'Fabianek, R.A.' 13 2 'Huber-Wunderlich, M.' 14 2 'Glockshuber, R.' 15 2 'Kunzler, P.' 16 2 'Hennecke, H.' 17 2 'Thony-Meyer, L.' 18 3 'Fabianek, R.A.' 19 3 'Hennecke, H.' 20 3 'Thony-Meyer, L.' 21 # _cell.entry_id 1KNG _cell.length_a 35.1 _cell.length_b 48.2 _cell.length_c 90.2 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1KNG _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'THIOL:DISULFIDE INTERCHANGE PROTEIN CYCY' 16893.371 1 ? ? ? ? 2 water nat water 18.015 154 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'thioredoxin-like protein CcmG' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DPSRIPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINY KDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKALK ; _entity_poly.pdbx_seq_one_letter_code_can ;DPSRIPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINY KDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKALK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PRO n 1 3 SER n 1 4 ARG n 1 5 ILE n 1 6 PRO n 1 7 SER n 1 8 ALA n 1 9 LEU n 1 10 ILE n 1 11 GLY n 1 12 ARG n 1 13 PRO n 1 14 ALA n 1 15 PRO n 1 16 GLN n 1 17 THR n 1 18 ALA n 1 19 LEU n 1 20 PRO n 1 21 PRO n 1 22 LEU n 1 23 GLU n 1 24 GLY n 1 25 LEU n 1 26 GLN n 1 27 ALA n 1 28 ASP n 1 29 ASN n 1 30 VAL n 1 31 GLN n 1 32 VAL n 1 33 PRO n 1 34 GLY n 1 35 LEU n 1 36 ASP n 1 37 PRO n 1 38 ALA n 1 39 ALA n 1 40 PHE n 1 41 LYS n 1 42 GLY n 1 43 LYS n 1 44 VAL n 1 45 SER n 1 46 LEU n 1 47 VAL n 1 48 ASN n 1 49 VAL n 1 50 TRP n 1 51 ALA n 1 52 SER n 1 53 TRP n 1 54 CYS n 1 55 VAL n 1 56 PRO n 1 57 CYS n 1 58 HIS n 1 59 ASP n 1 60 GLU n 1 61 ALA n 1 62 PRO n 1 63 LEU n 1 64 LEU n 1 65 THR n 1 66 GLU n 1 67 LEU n 1 68 GLY n 1 69 LYS n 1 70 ASP n 1 71 LYS n 1 72 ARG n 1 73 PHE n 1 74 GLN n 1 75 LEU n 1 76 VAL n 1 77 GLY n 1 78 ILE n 1 79 ASN n 1 80 TYR n 1 81 LYS n 1 82 ASP n 1 83 ALA n 1 84 ALA n 1 85 ASP n 1 86 ASN n 1 87 ALA n 1 88 ARG n 1 89 ARG n 1 90 PHE n 1 91 LEU n 1 92 GLY n 1 93 ARG n 1 94 TYR n 1 95 GLY n 1 96 ASN n 1 97 PRO n 1 98 PHE n 1 99 GLY n 1 100 ARG n 1 101 VAL n 1 102 GLY n 1 103 VAL n 1 104 ASP n 1 105 ALA n 1 106 ASN n 1 107 GLY n 1 108 ARG n 1 109 ALA n 1 110 SER n 1 111 ILE n 1 112 GLU n 1 113 TRP n 1 114 GLY n 1 115 VAL n 1 116 TYR n 1 117 GLY n 1 118 VAL n 1 119 PRO n 1 120 GLU n 1 121 THR n 1 122 PHE n 1 123 VAL n 1 124 VAL n 1 125 GLY n 1 126 ARG n 1 127 GLU n 1 128 GLY n 1 129 THR n 1 130 ILE n 1 131 VAL n 1 132 TYR n 1 133 LYS n 1 134 LEU n 1 135 VAL n 1 136 GLY n 1 137 PRO n 1 138 ILE n 1 139 THR n 1 140 PRO n 1 141 ASP n 1 142 ASN n 1 143 LEU n 1 144 ARG n 1 145 SER n 1 146 VAL n 1 147 LEU n 1 148 LEU n 1 149 PRO n 1 150 GLN n 1 151 MET n 1 152 GLU n 1 153 LYS n 1 154 ALA n 1 155 LEU n 1 156 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bradyrhizobium _entity_src_gen.pdbx_gene_src_gene cycy _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bradyrhizobium japonicum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 375 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pRJ2766 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CYCY_BRAJA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DPSRIPSALIGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINY KDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKALK ; _struct_ref.pdbx_align_begin 39 _struct_ref.pdbx_db_accession P30960 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KNG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 156 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P30960 _struct_ref_seq.db_align_beg 39 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 194 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 39 _struct_ref_seq.pdbx_auth_seq_align_end 194 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1KNG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.1M HEPES pH 6.5, 2% PEG 400, 2M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 277 ? 1 2 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-02 _diffrn_detector.details ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ;58 cm long, Pt-coated, fused silica, vertical focussing mirror, Cylindrically bent triangular Si(111) asymmetric cut, horizontal focus monochromator ; 'SINGLE WAVELENGTH' x-ray 2 1 M 'bent cylindrical Si-mirror (Rh coating), Si(111) double-crystal monochromator' MAD x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.08 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.08 # _reflns.entry_id 1KNG _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20 _reflns.d_resolution_high 1.14 _reflns.number_obs 50056 _reflns.number_all 50056 _reflns.percent_possible_obs 88.4 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.49 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.d_res_high 1.14 _reflns_shell.d_res_low 1.18 _reflns_shell.percent_possible_all 80.8 _reflns_shell.Rmerge_I_obs 0.291 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.64 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4512 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.entry_id 1KNG _refine.ls_number_reflns_obs 50042 _refine.ls_number_reflns_all 50042 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.14 _refine.ls_percent_reflns_obs 88.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.151 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 5037 _refine.ls_number_parameters 11353 _refine.ls_number_restraints 7075 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS WERE GENERATED ACCORDING TO THE RIDING MODEL WHICH IS BASED ON GEOMETRIC CRITERIA. TO GENERATE THE HYDROGENS REFER TO THE LYSOZYME TUTORIAL ON THE SHELX HOMEPAGE. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model anisotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1,2 _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1KNG _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 8 _refine_analyze.occupancy_sum_hydrogen 1018 _refine_analyze.occupancy_sum_non_hydrogen 1195 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1077 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 154 _refine_hist.number_atoms_total 1231 _refine_hist.d_res_high 1.14 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.090 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.082 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.019 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.110 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.029 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.006 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1KNG _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.118 _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.1089 _pdbx_refine.free_R_factor_4sig_cutoff 0.1417 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 4080 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 40312 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1KNG _struct.title 'Crystal structure of CcmG reducing oxidoreductase at 1.14 A' _struct.pdbx_descriptor 'THIOL:DISULFIDE INTERCHANGE PROTEIN CYCY' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KNG _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'thioredoxin fold, cytochrome c maturation, atomic resolution, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 36 ? LYS A 41 ? ASP A 74 LYS A 79 5 ? 6 HELX_P HELX_P2 2 CYS A 54 ? GLY A 68 ? CYS A 92 GLY A 106 1 ? 15 HELX_P HELX_P3 3 ALA A 83 ? GLY A 95 ? ALA A 121 GLY A 133 1 ? 13 HELX_P HELX_P4 4 GLY A 107 ? TRP A 113 ? GLY A 145 TRP A 151 1 ? 7 HELX_P HELX_P5 5 THR A 139 ? VAL A 146 ? THR A 177 VAL A 184 1 ? 8 HELX_P HELX_P6 6 VAL A 146 ? LEU A 155 ? VAL A 184 LEU A 193 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 54 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 57 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 92 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 95 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.042 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 118 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 156 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 119 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 157 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 26 ? ALA A 27 ? GLN A 64 ALA A 65 A 2 VAL A 30 ? GLN A 31 ? VAL A 68 GLN A 69 B 1 ARG A 100 ? ASP A 104 ? ARG A 138 ASP A 142 B 2 GLN A 74 ? TYR A 80 ? GLN A 112 TYR A 118 B 3 SER A 45 ? TRP A 50 ? SER A 83 TRP A 88 B 4 GLU A 120 ? VAL A 124 ? GLU A 158 VAL A 162 B 5 ILE A 130 ? VAL A 135 ? ILE A 168 VAL A 173 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 27 ? N ALA A 65 O VAL A 30 ? O VAL A 68 B 1 2 O ASP A 104 ? O ASP A 142 N ASN A 79 ? N ASN A 117 B 2 3 O VAL A 76 ? O VAL A 114 N LEU A 46 ? N LEU A 84 B 3 4 N SER A 45 ? N SER A 83 O VAL A 124 ? O VAL A 162 B 4 5 N THR A 121 ? N THR A 159 O LEU A 134 ? O LEU A 172 # _database_PDB_matrix.entry_id 1KNG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KNG _atom_sites.fract_transf_matrix[1][1] 0.028502 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020766 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011092 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 39 ? ? ? A . n A 1 2 PRO 2 40 ? ? ? A . n A 1 3 SER 3 41 ? ? ? A . n A 1 4 ARG 4 42 ? ? ? A . n A 1 5 ILE 5 43 ? ? ? A . n A 1 6 PRO 6 44 ? ? ? A . n A 1 7 SER 7 45 ? ? ? A . n A 1 8 ALA 8 46 ? ? ? A . n A 1 9 LEU 9 47 ? ? ? A . n A 1 10 ILE 10 48 ? ? ? A . n A 1 11 GLY 11 49 ? ? ? A . n A 1 12 ARG 12 50 50 ARG ALA A . n A 1 13 PRO 13 51 51 PRO PRO A . n A 1 14 ALA 14 52 52 ALA ALA A . n A 1 15 PRO 15 53 53 PRO PRO A . n A 1 16 GLN 16 54 54 GLN GLN A . n A 1 17 THR 17 55 55 THR THR A . n A 1 18 ALA 18 56 56 ALA ALA A . n A 1 19 LEU 19 57 57 LEU LEU A . n A 1 20 PRO 20 58 58 PRO PRO A . n A 1 21 PRO 21 59 59 PRO PRO A . n A 1 22 LEU 22 60 60 LEU LEU A . n A 1 23 GLU 23 61 61 GLU GLU A . n A 1 24 GLY 24 62 62 GLY GLY A . n A 1 25 LEU 25 63 63 LEU LEU A . n A 1 26 GLN 26 64 64 GLN GLN A . n A 1 27 ALA 27 65 65 ALA ALA A . n A 1 28 ASP 28 66 66 ASP ASP A . n A 1 29 ASN 29 67 67 ASN ASN A . n A 1 30 VAL 30 68 68 VAL VAL A . n A 1 31 GLN 31 69 69 GLN GLN A . n A 1 32 VAL 32 70 70 VAL VAL A . n A 1 33 PRO 33 71 71 PRO PRO A . n A 1 34 GLY 34 72 72 GLY GLY A . n A 1 35 LEU 35 73 73 LEU LEU A . n A 1 36 ASP 36 74 74 ASP ASP A . n A 1 37 PRO 37 75 75 PRO PRO A . n A 1 38 ALA 38 76 76 ALA ALA A . n A 1 39 ALA 39 77 77 ALA ALA A . n A 1 40 PHE 40 78 78 PHE PHE A . n A 1 41 LYS 41 79 79 LYS LYS A . n A 1 42 GLY 42 80 80 GLY GLY A . n A 1 43 LYS 43 81 81 LYS LYS A . n A 1 44 VAL 44 82 82 VAL VAL A . n A 1 45 SER 45 83 83 SER SER A . n A 1 46 LEU 46 84 84 LEU LEU A . n A 1 47 VAL 47 85 85 VAL VAL A . n A 1 48 ASN 48 86 86 ASN ASN A . n A 1 49 VAL 49 87 87 VAL VAL A . n A 1 50 TRP 50 88 88 TRP TRP A . n A 1 51 ALA 51 89 89 ALA ALA A . n A 1 52 SER 52 90 90 SER SER A . n A 1 53 TRP 53 91 91 TRP TRP A . n A 1 54 CYS 54 92 92 CYS CYS A . n A 1 55 VAL 55 93 93 VAL VAL A . n A 1 56 PRO 56 94 94 PRO PRO A . n A 1 57 CYS 57 95 95 CYS CYS A . n A 1 58 HIS 58 96 96 HIS HIS A . n A 1 59 ASP 59 97 97 ASP ASP A . n A 1 60 GLU 60 98 98 GLU GLU A . n A 1 61 ALA 61 99 99 ALA ALA A . n A 1 62 PRO 62 100 100 PRO PRO A . n A 1 63 LEU 63 101 101 LEU LEU A . n A 1 64 LEU 64 102 102 LEU LEU A . n A 1 65 THR 65 103 103 THR THR A . n A 1 66 GLU 66 104 104 GLU GLU A . n A 1 67 LEU 67 105 105 LEU LEU A . n A 1 68 GLY 68 106 106 GLY GLY A . n A 1 69 LYS 69 107 107 LYS ALA A . n A 1 70 ASP 70 108 108 ASP ASP A . n A 1 71 LYS 71 109 109 LYS ALA A . n A 1 72 ARG 72 110 110 ARG ARG A . n A 1 73 PHE 73 111 111 PHE PHE A . n A 1 74 GLN 74 112 112 GLN GLN A . n A 1 75 LEU 75 113 113 LEU LEU A . n A 1 76 VAL 76 114 114 VAL VAL A . n A 1 77 GLY 77 115 115 GLY GLY A . n A 1 78 ILE 78 116 116 ILE ILE A . n A 1 79 ASN 79 117 117 ASN ASN A . n A 1 80 TYR 80 118 118 TYR TYR A . n A 1 81 LYS 81 119 119 LYS LYS A . n A 1 82 ASP 82 120 120 ASP ASP A . n A 1 83 ALA 83 121 121 ALA ALA A . n A 1 84 ALA 84 122 122 ALA ALA A . n A 1 85 ASP 85 123 123 ASP ASP A . n A 1 86 ASN 86 124 124 ASN ASN A . n A 1 87 ALA 87 125 125 ALA ALA A . n A 1 88 ARG 88 126 126 ARG ARG A . n A 1 89 ARG 89 127 127 ARG ARG A . n A 1 90 PHE 90 128 128 PHE PHE A . n A 1 91 LEU 91 129 129 LEU LEU A . n A 1 92 GLY 92 130 130 GLY GLY A . n A 1 93 ARG 93 131 131 ARG ARG A . n A 1 94 TYR 94 132 132 TYR TYR A . n A 1 95 GLY 95 133 133 GLY GLY A . n A 1 96 ASN 96 134 134 ASN ASN A . n A 1 97 PRO 97 135 135 PRO PRO A . n A 1 98 PHE 98 136 136 PHE PHE A . n A 1 99 GLY 99 137 137 GLY GLY A . n A 1 100 ARG 100 138 138 ARG ARG A . n A 1 101 VAL 101 139 139 VAL VAL A . n A 1 102 GLY 102 140 140 GLY GLY A . n A 1 103 VAL 103 141 141 VAL VAL A . n A 1 104 ASP 104 142 142 ASP ASP A . n A 1 105 ALA 105 143 143 ALA ALA A . n A 1 106 ASN 106 144 144 ASN ASN A . n A 1 107 GLY 107 145 145 GLY GLY A . n A 1 108 ARG 108 146 146 ARG ARG A . n A 1 109 ALA 109 147 147 ALA ALA A . n A 1 110 SER 110 148 148 SER SER A . n A 1 111 ILE 111 149 149 ILE ILE A . n A 1 112 GLU 112 150 150 GLU GLU A . n A 1 113 TRP 113 151 151 TRP TRP A . n A 1 114 GLY 114 152 152 GLY GLY A . n A 1 115 VAL 115 153 153 VAL VAL A . n A 1 116 TYR 116 154 154 TYR ALA A . n A 1 117 GLY 117 155 155 GLY GLY A . n A 1 118 VAL 118 156 156 VAL VAL A . n A 1 119 PRO 119 157 157 PRO PRO A . n A 1 120 GLU 120 158 158 GLU GLU A . n A 1 121 THR 121 159 159 THR THR A . n A 1 122 PHE 122 160 160 PHE PHE A . n A 1 123 VAL 123 161 161 VAL VAL A . n A 1 124 VAL 124 162 162 VAL VAL A . n A 1 125 GLY 125 163 163 GLY GLY A . n A 1 126 ARG 126 164 164 ARG ARG A . n A 1 127 GLU 127 165 165 GLU GLU A . n A 1 128 GLY 128 166 166 GLY GLY A . n A 1 129 THR 129 167 167 THR THR A . n A 1 130 ILE 130 168 168 ILE ILE A . n A 1 131 VAL 131 169 169 VAL VAL A . n A 1 132 TYR 132 170 170 TYR TYR A . n A 1 133 LYS 133 171 171 LYS LYS A . n A 1 134 LEU 134 172 172 LEU LEU A . n A 1 135 VAL 135 173 173 VAL VAL A . n A 1 136 GLY 136 174 174 GLY GLY A . n A 1 137 PRO 137 175 175 PRO PRO A . n A 1 138 ILE 138 176 176 ILE ILE A . n A 1 139 THR 139 177 177 THR THR A . n A 1 140 PRO 140 178 178 PRO PRO A . n A 1 141 ASP 141 179 179 ASP ASP A . n A 1 142 ASN 142 180 180 ASN ASN A . n A 1 143 LEU 143 181 181 LEU LEU A . n A 1 144 ARG 144 182 182 ARG ALA A . n A 1 145 SER 145 183 183 SER SER A . n A 1 146 VAL 146 184 184 VAL VAL A . n A 1 147 LEU 147 185 185 LEU LEU A . n A 1 148 LEU 148 186 186 LEU LEU A . n A 1 149 PRO 149 187 187 PRO PRO A . n A 1 150 GLN 150 188 188 GLN GLN A . n A 1 151 MET 151 189 189 MET MET A . n A 1 152 GLU 152 190 190 GLU GLU A . n A 1 153 LYS 153 191 191 LYS LYS A . n A 1 154 ALA 154 192 192 ALA ALA A . n A 1 155 LEU 155 193 193 LEU LEU A . n A 1 156 LYS 156 194 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-07-17 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 SHARP phasing . ? 4 SOLOMON phasing . ? 5 SHELXL-97 refinement . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 164 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 A _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1050 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 127 ? ? CZ A ARG 127 ? ? NH1 A ARG 127 ? ? 123.44 120.30 3.14 0.50 N 2 1 NH1 A ARG 131 ? A CZ A ARG 131 ? A NH2 A ARG 131 ? A 111.74 119.40 -7.66 1.10 N 3 1 NE A ARG 131 ? ? CZ A ARG 131 ? A NH1 A ARG 131 ? A 133.00 120.30 12.70 0.50 N 4 1 NE A ARG 131 ? ? CZ A ARG 131 ? A NH2 A ARG 131 ? A 115.27 120.30 -5.03 0.50 N 5 1 NE A ARG 138 ? ? CZ A ARG 138 ? ? NH2 A ARG 138 ? ? 115.91 120.30 -4.39 0.50 N 6 1 CA A ILE 149 ? ? CB A ILE 149 ? ? CG1 A ILE 149 ? ? 123.44 111.00 12.44 1.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 54 ? ? -90.08 38.19 2 1 ASP A 142 ? ? -112.98 76.06 3 1 VAL A 184 ? ? -129.91 -60.95 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 50 ? CG ? A ARG 12 CG 2 1 Y 1 A ARG 50 ? CD ? A ARG 12 CD 3 1 Y 1 A ARG 50 ? NE ? A ARG 12 NE 4 1 Y 1 A ARG 50 ? CZ ? A ARG 12 CZ 5 1 Y 1 A ARG 50 ? NH1 ? A ARG 12 NH1 6 1 Y 1 A ARG 50 ? NH2 ? A ARG 12 NH2 7 1 Y 0 A LYS 81 ? NZ A A LYS 43 NZ 8 1 Y 1 A LYS 107 ? CG ? A LYS 69 CG 9 1 Y 1 A LYS 107 ? CD ? A LYS 69 CD 10 1 Y 1 A LYS 107 ? CE ? A LYS 69 CE 11 1 Y 1 A LYS 107 ? NZ ? A LYS 69 NZ 12 1 Y 1 A LYS 109 ? CG ? A LYS 71 CG 13 1 Y 1 A LYS 109 ? CD ? A LYS 71 CD 14 1 Y 1 A LYS 109 ? CE ? A LYS 71 CE 15 1 Y 1 A LYS 109 ? NZ ? A LYS 71 NZ 16 1 Y 0 A ILE 149 ? CD1 ? A ILE 111 CD1 17 1 Y 1 A TYR 154 ? CG ? A TYR 116 CG 18 1 Y 1 A TYR 154 ? CD1 ? A TYR 116 CD1 19 1 Y 1 A TYR 154 ? CD2 ? A TYR 116 CD2 20 1 Y 1 A TYR 154 ? CE1 ? A TYR 116 CE1 21 1 Y 1 A TYR 154 ? CE2 ? A TYR 116 CE2 22 1 Y 1 A TYR 154 ? CZ ? A TYR 116 CZ 23 1 Y 1 A TYR 154 ? OH ? A TYR 116 OH 24 1 Y 0 A ARG 164 ? NE ? A ARG 126 NE 25 1 Y 0 A ARG 164 ? CZ A A ARG 126 CZ 26 1 Y 0 A ARG 164 ? NH1 A A ARG 126 NH1 27 1 Y 0 A ARG 164 ? NH2 A A ARG 126 NH2 28 1 Y 1 A ARG 182 ? CG ? A ARG 144 CG 29 1 Y 1 A ARG 182 ? CD ? A ARG 144 CD 30 1 Y 1 A ARG 182 ? NE ? A ARG 144 NE 31 1 Y 1 A ARG 182 ? CZ ? A ARG 144 CZ 32 1 Y 1 A ARG 182 ? NH1 ? A ARG 144 NH1 33 1 Y 1 A ARG 182 ? NH2 ? A ARG 144 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 39 ? A ASP 1 2 1 Y 1 A PRO 40 ? A PRO 2 3 1 Y 1 A SER 41 ? A SER 3 4 1 Y 1 A ARG 42 ? A ARG 4 5 1 Y 1 A ILE 43 ? A ILE 5 6 1 Y 1 A PRO 44 ? A PRO 6 7 1 Y 1 A SER 45 ? A SER 7 8 1 Y 1 A ALA 46 ? A ALA 8 9 1 Y 1 A LEU 47 ? A LEU 9 10 1 Y 1 A ILE 48 ? A ILE 10 11 1 Y 1 A GLY 49 ? A GLY 11 12 1 Y 1 A LYS 194 ? A LYS 156 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1001 1001 HOH HOH A . B 2 HOH 2 1002 1002 HOH HOH A . B 2 HOH 3 1003 1003 HOH HOH A . B 2 HOH 4 1004 1004 HOH HOH A . B 2 HOH 5 1005 1005 HOH HOH A . B 2 HOH 6 1006 1006 HOH HOH A . B 2 HOH 7 1007 1007 HOH HOH A . B 2 HOH 8 1008 1008 HOH HOH A . B 2 HOH 9 1009 1009 HOH HOH A . B 2 HOH 10 1010 1010 HOH HOH A . B 2 HOH 11 1011 1011 HOH HOH A . B 2 HOH 12 1012 1012 HOH HOH A . B 2 HOH 13 1013 1013 HOH HOH A . B 2 HOH 14 1014 1014 HOH HOH A . B 2 HOH 15 1015 1015 HOH HOH A . B 2 HOH 16 1016 1016 HOH HOH A . B 2 HOH 17 1017 1017 HOH HOH A . B 2 HOH 18 1018 1018 HOH HOH A . B 2 HOH 19 1019 1019 HOH HOH A . B 2 HOH 20 1020 1020 HOH HOH A . B 2 HOH 21 1021 1021 HOH HOH A . B 2 HOH 22 1022 1022 HOH HOH A . B 2 HOH 23 1023 1023 HOH HOH A . B 2 HOH 24 1024 1024 HOH HOH A . B 2 HOH 25 1025 1025 HOH HOH A . B 2 HOH 26 1026 1026 HOH HOH A . B 2 HOH 27 1027 1027 HOH HOH A . B 2 HOH 28 1028 1028 HOH HOH A . B 2 HOH 29 1029 1029 HOH HOH A . B 2 HOH 30 1030 1030 HOH HOH A . B 2 HOH 31 1031 1031 HOH HOH A . B 2 HOH 32 1032 1032 HOH HOH A . B 2 HOH 33 1033 1033 HOH HOH A . B 2 HOH 34 1034 1034 HOH HOH A . B 2 HOH 35 1035 1035 HOH HOH A . B 2 HOH 36 1036 1036 HOH HOH A . B 2 HOH 37 1037 1037 HOH HOH A . B 2 HOH 38 1038 1038 HOH HOH A . B 2 HOH 39 1039 1039 HOH HOH A . B 2 HOH 40 1040 1040 HOH HOH A . B 2 HOH 41 1041 1041 HOH HOH A . B 2 HOH 42 1042 1042 HOH HOH A . B 2 HOH 43 1043 1043 HOH HOH A . B 2 HOH 44 1044 1044 HOH HOH A . B 2 HOH 45 1045 1045 HOH HOH A . B 2 HOH 46 1046 1046 HOH HOH A . B 2 HOH 47 1047 1047 HOH HOH A . B 2 HOH 48 1048 1048 HOH HOH A . B 2 HOH 49 1049 1049 HOH HOH A . B 2 HOH 50 1050 1050 HOH HOH A . B 2 HOH 51 1051 1051 HOH HOH A . B 2 HOH 52 1052 1052 HOH HOH A . B 2 HOH 53 1053 1053 HOH HOH A . B 2 HOH 54 1054 1054 HOH HOH A . B 2 HOH 55 1055 1055 HOH HOH A . B 2 HOH 56 1056 1056 HOH HOH A . B 2 HOH 57 1057 1057 HOH HOH A . B 2 HOH 58 1058 1058 HOH HOH A . B 2 HOH 59 1059 1059 HOH HOH A . B 2 HOH 60 1060 1060 HOH HOH A . B 2 HOH 61 1061 1061 HOH HOH A . B 2 HOH 62 1062 1062 HOH HOH A . B 2 HOH 63 1063 1063 HOH HOH A . B 2 HOH 64 1064 1064 HOH HOH A . B 2 HOH 65 1065 1065 HOH HOH A . B 2 HOH 66 1066 1066 HOH HOH A . B 2 HOH 67 1067 1067 HOH HOH A . B 2 HOH 68 1068 1068 HOH HOH A . B 2 HOH 69 1069 1069 HOH HOH A . B 2 HOH 70 1070 1070 HOH HOH A . B 2 HOH 71 1071 1071 HOH HOH A . B 2 HOH 72 1072 1072 HOH HOH A . B 2 HOH 73 1073 1073 HOH HOH A . B 2 HOH 74 1074 1074 HOH HOH A . B 2 HOH 75 1075 1075 HOH HOH A . B 2 HOH 76 1076 1076 HOH HOH A . B 2 HOH 77 1077 1077 HOH HOH A . B 2 HOH 78 1078 1078 HOH HOH A . B 2 HOH 79 1079 1079 HOH HOH A . B 2 HOH 80 1080 1080 HOH HOH A . B 2 HOH 81 1081 1081 HOH HOH A . B 2 HOH 82 1082 1082 HOH HOH A . B 2 HOH 83 1083 1083 HOH HOH A . B 2 HOH 84 1084 1084 HOH HOH A . B 2 HOH 85 1085 1085 HOH HOH A . B 2 HOH 86 1086 1086 HOH HOH A . B 2 HOH 87 1087 1087 HOH HOH A . B 2 HOH 88 1088 1088 HOH HOH A . B 2 HOH 89 1089 1089 HOH HOH A . B 2 HOH 90 1090 1090 HOH HOH A . B 2 HOH 91 1091 1091 HOH HOH A . B 2 HOH 92 1092 1092 HOH HOH A . B 2 HOH 93 1093 1093 HOH HOH A . B 2 HOH 94 1094 1094 HOH HOH A . B 2 HOH 95 1095 1095 HOH HOH A . B 2 HOH 96 1096 1096 HOH HOH A . B 2 HOH 97 1097 1097 HOH HOH A . B 2 HOH 98 1098 1098 HOH HOH A . B 2 HOH 99 1099 1099 HOH HOH A . B 2 HOH 100 1100 1100 HOH HOH A . B 2 HOH 101 1101 1101 HOH HOH A . B 2 HOH 102 1102 1102 HOH HOH A . B 2 HOH 103 1103 1103 HOH HOH A . B 2 HOH 104 1104 1104 HOH HOH A . B 2 HOH 105 1105 1105 HOH HOH A . B 2 HOH 106 1106 1106 HOH HOH A . B 2 HOH 107 1107 1107 HOH HOH A . B 2 HOH 108 1108 1108 HOH HOH A . B 2 HOH 109 1109 1109 HOH HOH A . B 2 HOH 110 1110 1110 HOH HOH A . B 2 HOH 111 1111 1111 HOH HOH A . B 2 HOH 112 1112 1112 HOH HOH A . B 2 HOH 113 1113 1113 HOH HOH A . B 2 HOH 114 1114 1114 HOH HOH A . B 2 HOH 115 1115 1115 HOH HOH A . B 2 HOH 116 1116 1116 HOH HOH A . B 2 HOH 117 1117 1117 HOH HOH A . B 2 HOH 118 1118 1118 HOH HOH A . B 2 HOH 119 1119 1119 HOH HOH A . B 2 HOH 120 1120 1120 HOH HOH A . B 2 HOH 121 1121 1121 HOH HOH A . B 2 HOH 122 1122 1122 HOH HOH A . B 2 HOH 123 1123 1123 HOH HOH A . B 2 HOH 124 1124 1124 HOH HOH A . B 2 HOH 125 1125 1125 HOH HOH A . B 2 HOH 126 1126 1126 HOH HOH A . B 2 HOH 127 1127 1127 HOH HOH A . B 2 HOH 128 1128 1128 HOH HOH A . B 2 HOH 129 1129 1129 HOH HOH A . B 2 HOH 130 1130 1130 HOH HOH A . B 2 HOH 131 1131 1131 HOH HOH A . B 2 HOH 132 1132 1132 HOH HOH A . B 2 HOH 133 1133 1133 HOH HOH A . B 2 HOH 134 1134 1134 HOH HOH A . B 2 HOH 135 1135 1135 HOH HOH A . B 2 HOH 136 1136 1136 HOH HOH A . B 2 HOH 137 1137 1137 HOH HOH A . B 2 HOH 138 1138 1138 HOH HOH A . B 2 HOH 139 1139 1139 HOH HOH A . B 2 HOH 140 1140 1140 HOH HOH A . B 2 HOH 141 1141 1141 HOH HOH A . B 2 HOH 142 1142 1142 HOH HOH A . B 2 HOH 143 1143 1143 HOH HOH A . B 2 HOH 144 1144 1144 HOH HOH A . B 2 HOH 145 1145 1145 HOH HOH A . B 2 HOH 146 1146 1146 HOH HOH A . B 2 HOH 147 1147 1147 HOH HOH A . B 2 HOH 148 1148 1148 HOH HOH A . B 2 HOH 149 1149 1149 HOH HOH A . B 2 HOH 150 1150 1150 HOH HOH A . B 2 HOH 151 1151 1151 HOH HOH A . B 2 HOH 152 1152 1152 HOH HOH A . B 2 HOH 153 1153 1153 HOH HOH A . B 2 HOH 154 1154 1154 HOH HOH A . #