data_1KOS # _entry.id 1KOS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KOS pdb_00001kos 10.2210/pdb1kos/pdb RCSB RCSB000990 ? ? WWPDB D_1000000990 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-10-22 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_assembly 3 4 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' struct_conn 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KOS _pdbx_database_status.recvd_initial_deposition_date 1999-05-03 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Koshlap, K.M.' 1 'Guenther, R.' 2 'Sochacka, E.' 3 'Malkiewicz, A.' 4 'Agris, P.F.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.' Biochemistry 38 8647 8656 1999 BICHAW US 0006-2960 0033 ? 10393540 10.1021/bi990118w 1 ;Small Structural Ensembles for a 17-Nucleotide Mimic of the tRNA Tpsic-Loop Via Fitting Dipolar Relaxation Rates with the Quadratic Programming Algorithm ; Biopolymers 46 329 ? 1998 BIPMAA US 0006-3525 0161 ? ? '10.1002/(SICI)1097-0282(19981015)46:5<329::AID-BIP4>3.3.CO;2-K' 2 'The Dynamic NMR Structure of the T Psi C-Loop: Implications for the Specificity of tRNA Methylation' J.Biomol.NMR 3 229 ? 1997 JBNME9 NE 0925-2738 0800 ? ? 10.1023/A:1018618606857 3 ;Restrained Refinement of the Monoclinic Form of Yeast Phenylalanine Transfer RNA. Temperature Factors and Dynamics, Coordinated Waters, and Base-Pair Propeller Twist Angles ; Biochemistry 25 4868 ? 1986 BICHAW US 0006-2960 0033 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Koshlap, K.M.' 1 ? primary 'Guenther, R.' 2 ? primary 'Sochacka, E.' 3 ? primary 'Malkiewicz, A.' 4 ? primary 'Agris, P.F.' 5 ? 1 'Schmitz, U.' 6 ? 1 'Donati, A.' 7 ? 1 'James, T.L.' 8 ? 1 'Ulyanov, N.B.' 9 ? 1 'Yao, L.' 10 ? 2 'Yao, L.J.' 11 ? 2 'James, T.L.' 12 ? 2 'Kealey, J.T.' 13 ? 2 'Santi, D.V.' 14 ? 2 'Schmitz, U.' 15 ? 3 'Westhof, E.' 16 ? 3 'Sundaralingam, M.' 17 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;5'-R(*CP*UP*GP*UP*GP*(5MU)P*UP*CP*GP*AP*UP*(CH)P*CP*AP*CP*AP*G)- 3' ; _entity.formula_weight 5395.255 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation +C49C _entity.pdbx_fragment 'TPSIC DOMAIN OF TRNA' _entity.details 'C60 IS PROTONATED' # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'CUGUG(5MU)UCGAU(CH)CACAG' _entity_poly.pdbx_seq_one_letter_code_can CUGUGUUCGAUCCACAG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 U n 1 3 G n 1 4 U n 1 5 G n 1 6 5MU n 1 7 U n 1 8 C n 1 9 G n 1 10 A n 1 11 U n 1 12 CH n 1 13 C n 1 14 A n 1 15 C n 1 16 A n 1 17 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'SEQUENCE FROM YEAST (SACCHAROMYCES CEREVISIAE) TRNA PHE' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5MU 'RNA linking' n ;5-METHYLURIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O9 P' 338.208 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CH 'RNA linking' n ;N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE ; ? 'C9 H15 N3 O8 P 1' 324.204 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C A . n A 1 2 U 2 2 2 U U A . n A 1 3 G 3 3 3 G G A . n A 1 4 U 4 4 4 U U A . n A 1 5 G 5 5 5 G G A . n A 1 6 5MU 6 6 6 5MU 5MU A . n A 1 7 U 7 7 7 U U A . n A 1 8 C 8 8 8 C C A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 U 11 11 11 U U A . n A 1 12 CH 12 12 12 CH CH A . n A 1 13 C 13 13 13 C C A . n A 1 14 A 14 14 14 A A A . n A 1 15 C 15 15 15 C C A . n A 1 16 A 16 16 16 A A A . n A 1 17 G 17 17 17 G G A . n # _cell.entry_id 1KOS _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KOS _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1KOS _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1KOS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1KOS _struct.title 'SOLUTION NMR STRUCTURE OF AN ANALOG OF THE YEAST TRNA PHE T STEM LOOP CONTAINING RIBOTHYMIDINE AT ITS NATURALLY OCCURRING POSITION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KOS _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'TRNA, T STEM LOOP, TRNA DOMAIN, RNA HAIRPIN, RNA FOLDING, RNA' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1KOS _struct_ref.pdbx_db_accession 1KOS _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KOS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 17 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1KOS _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 17 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 17 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A G 5 "O3'" ? ? ? 1_555 A 5MU 6 P ? ? A G 5 A 5MU 6 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale2 covale both ? A 5MU 6 "O3'" ? ? ? 1_555 A U 7 P ? ? A 5MU 6 A U 7 1_555 ? ? ? ? ? ? ? 1.632 ? ? covale3 covale both ? A U 11 "O3'" ? ? ? 1_555 A CH 12 P ? ? A U 11 A CH 12 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale4 covale both ? A CH 12 "O3'" ? ? ? 1_555 A C 13 P ? ? A CH 12 A C 13 1_555 ? ? ? ? ? ? ? 1.615 ? ? hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 A G 17 N1 ? ? A C 1 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 A G 17 O6 ? ? A C 1 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 A G 17 N2 ? ? A C 1 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 N3 ? ? ? 1_555 A A 16 N1 ? ? A U 2 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 2 O4 ? ? ? 1_555 A A 16 N6 ? ? A U 2 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 N7 ? ? ? 1_555 A CH 12 N4 ? ? A G 3 A CH 12 1_555 ? ? ? ? ? ? 'G-CH PAIR' ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 15 N3 ? ? A G 3 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 15 O2 ? ? A G 3 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 15 N4 ? ? A G 3 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 14 N1 ? ? A U 4 A A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 14 N6 ? ? A U 4 A A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 13 N3 ? ? A G 5 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 13 O2 ? ? A G 5 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 13 N4 ? ? A G 5 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "HO2'" A C 15 ? ? "O4'" A A 16 ? ? 1.57 2 1 O4 A U 2 ? ? H61 A A 16 ? ? 1.59 3 2 "O2'" A G 5 ? ? "H2'" A 5MU 6 ? ? 1.52 4 3 "HO2'" A C 15 ? ? "O4'" A A 16 ? ? 1.57 5 4 "HO2'" A C 15 ? ? "O4'" A A 16 ? ? 1.43 6 4 "O2'" A 5MU 6 ? ? "H5''" A U 7 ? ? 1.53 7 5 "O2'" A G 5 ? ? "H2'" A 5MU 6 ? ? 1.48 8 5 O4 A U 2 ? ? H61 A A 16 ? ? 1.58 9 6 "HO2'" A C 15 ? ? "O4'" A A 16 ? ? 1.52 10 6 "O2'" A G 5 ? ? "H2'" A 5MU 6 ? ? 1.55 11 7 H21 A G 5 ? ? O2 A C 13 ? ? 1.50 12 7 "HO2'" A C 15 ? ? "O4'" A A 16 ? ? 1.56 13 7 "O2'" A G 5 ? ? "H2'" A 5MU 6 ? ? 1.56 14 7 O4 A U 2 ? ? H61 A A 16 ? ? 1.56 15 8 "HO2'" A C 15 ? ? "O4'" A A 16 ? ? 1.38 16 8 "O2'" A G 5 ? ? "H2'" A 5MU 6 ? ? 1.48 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C2'" A C 1 ? ? "C1'" A C 1 ? ? 1.467 1.526 -0.059 0.008 N 2 1 "C2'" A G 3 ? ? "C1'" A G 3 ? ? 1.475 1.526 -0.051 0.008 N 3 1 C8 A G 3 ? ? N9 A G 3 ? ? 1.318 1.374 -0.056 0.007 N 4 1 "C2'" A G 5 ? ? "C1'" A G 5 ? ? 1.461 1.526 -0.065 0.008 N 5 1 C8 A G 5 ? ? N9 A G 5 ? ? 1.303 1.374 -0.071 0.007 N 6 1 N1 A C 13 ? ? C6 A C 13 ? ? 1.327 1.367 -0.040 0.006 N 7 1 C8 A G 17 ? ? N9 A G 17 ? ? 1.328 1.374 -0.046 0.007 N 8 2 "C2'" A C 1 ? ? "C1'" A C 1 ? ? 1.476 1.526 -0.050 0.008 N 9 2 "C2'" A G 3 ? ? "C1'" A G 3 ? ? 1.475 1.526 -0.051 0.008 N 10 2 C8 A G 3 ? ? N9 A G 3 ? ? 1.319 1.374 -0.055 0.007 N 11 2 "C2'" A G 5 ? ? "C1'" A G 5 ? ? 1.460 1.526 -0.066 0.008 N 12 2 C8 A G 5 ? ? N9 A G 5 ? ? 1.294 1.374 -0.080 0.007 N 13 2 "C3'" A C 8 ? ? "C2'" A C 8 ? ? 1.455 1.523 -0.068 0.011 N 14 2 N1 A C 15 ? ? C6 A C 15 ? ? 1.326 1.367 -0.041 0.006 N 15 2 C8 A G 17 ? ? N9 A G 17 ? ? 1.318 1.374 -0.056 0.007 N 16 2 N9 A G 17 ? ? C4 A G 17 ? ? 1.318 1.375 -0.057 0.008 N 17 3 "C2'" A C 1 ? ? "C1'" A C 1 ? ? 1.470 1.526 -0.056 0.008 N 18 3 "C2'" A G 3 ? ? "C1'" A G 3 ? ? 1.476 1.526 -0.050 0.008 N 19 3 C8 A G 3 ? ? N9 A G 3 ? ? 1.316 1.374 -0.058 0.007 N 20 3 "C2'" A G 5 ? ? "C1'" A G 5 ? ? 1.470 1.526 -0.056 0.008 N 21 3 C8 A G 5 ? ? N9 A G 5 ? ? 1.305 1.374 -0.069 0.007 N 22 3 C8 A G 17 ? ? N9 A G 17 ? ? 1.325 1.374 -0.049 0.007 N 23 4 "C2'" A C 1 ? ? "C1'" A C 1 ? ? 1.470 1.526 -0.056 0.008 N 24 4 "C2'" A G 3 ? ? "C1'" A G 3 ? ? 1.472 1.526 -0.054 0.008 N 25 4 C8 A G 3 ? ? N9 A G 3 ? ? 1.316 1.374 -0.058 0.007 N 26 4 "C2'" A G 5 ? ? "C1'" A G 5 ? ? 1.474 1.526 -0.052 0.008 N 27 4 C8 A G 5 ? ? N9 A G 5 ? ? 1.300 1.374 -0.074 0.007 N 28 4 C8 A G 17 ? ? N9 A G 17 ? ? 1.316 1.374 -0.058 0.007 N 29 5 "C2'" A C 1 ? ? "C1'" A C 1 ? ? 1.462 1.526 -0.064 0.008 N 30 5 "C2'" A G 3 ? ? "C1'" A G 3 ? ? 1.462 1.526 -0.064 0.008 N 31 5 C8 A G 3 ? ? N9 A G 3 ? ? 1.320 1.374 -0.054 0.007 N 32 5 "C2'" A G 5 ? ? "C1'" A G 5 ? ? 1.468 1.526 -0.058 0.008 N 33 5 C8 A G 5 ? ? N9 A G 5 ? ? 1.297 1.374 -0.077 0.007 N 34 5 N1 A C 15 ? ? C6 A C 15 ? ? 1.328 1.367 -0.039 0.006 N 35 5 C8 A G 17 ? ? N9 A G 17 ? ? 1.325 1.374 -0.049 0.007 N 36 6 "C2'" A C 1 ? ? "C1'" A C 1 ? ? 1.459 1.526 -0.067 0.008 N 37 6 C8 A G 3 ? ? N9 A G 3 ? ? 1.313 1.374 -0.061 0.007 N 38 6 "C2'" A G 5 ? ? "C1'" A G 5 ? ? 1.467 1.526 -0.059 0.008 N 39 6 C8 A G 5 ? ? N9 A G 5 ? ? 1.296 1.374 -0.078 0.007 N 40 6 C8 A G 17 ? ? N9 A G 17 ? ? 1.331 1.374 -0.043 0.007 N 41 7 "C2'" A C 1 ? ? "C1'" A C 1 ? ? 1.457 1.526 -0.069 0.008 N 42 7 "C2'" A G 3 ? ? "C1'" A G 3 ? ? 1.476 1.526 -0.050 0.008 N 43 7 C8 A G 3 ? ? N9 A G 3 ? ? 1.320 1.374 -0.054 0.007 N 44 7 C8 A G 5 ? ? N9 A G 5 ? ? 1.296 1.374 -0.078 0.007 N 45 7 "C3'" A C 8 ? ? "C2'" A C 8 ? ? 1.455 1.523 -0.068 0.011 N 46 7 N1 A C 13 ? ? C6 A C 13 ? ? 1.326 1.367 -0.041 0.006 N 47 7 N1 A C 15 ? ? C6 A C 15 ? ? 1.331 1.367 -0.036 0.006 N 48 7 C8 A G 17 ? ? N9 A G 17 ? ? 1.326 1.374 -0.048 0.007 N 49 8 "C2'" A C 1 ? ? "C1'" A C 1 ? ? 1.465 1.526 -0.061 0.008 N 50 8 C8 A G 3 ? ? N9 A G 3 ? ? 1.315 1.374 -0.059 0.007 N 51 8 "C2'" A G 5 ? ? "C1'" A G 5 ? ? 1.478 1.526 -0.048 0.008 N 52 8 C8 A G 5 ? ? N9 A G 5 ? ? 1.295 1.374 -0.079 0.007 N 53 8 C8 A G 17 ? ? N9 A G 17 ? ? 1.325 1.374 -0.049 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C1'" A C 1 ? ? "O4'" A C 1 ? ? "C4'" A C 1 ? ? 102.37 109.70 -7.33 0.70 N 2 1 "C3'" A C 1 ? ? "C2'" A C 1 ? ? "C1'" A C 1 ? ? 109.52 101.50 8.02 0.80 N 3 1 "O4'" A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 99.65 105.80 -6.15 1.00 N 4 1 N1 A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 101.61 112.00 -10.39 1.10 N 5 1 "O4'" A C 1 ? ? "C1'" A C 1 ? ? N1 A C 1 ? ? 123.38 108.50 14.88 0.70 N 6 1 N3 A C 1 ? ? C4 A C 1 ? ? N4 A C 1 ? ? 122.46 118.00 4.46 0.70 N 7 1 "C3'" A C 1 ? ? "O3'" A C 1 ? ? P A U 2 ? ? 129.33 119.70 9.63 1.20 Y 8 1 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 110.42 101.50 8.92 0.80 N 9 1 N9 A G 3 ? ? "C1'" A G 3 ? ? "C2'" A G 3 ? ? 99.45 112.00 -12.55 1.10 N 10 1 "O4'" A G 3 ? ? "C1'" A G 3 ? ? N9 A G 3 ? ? 114.23 108.50 5.73 0.70 N 11 1 C5 A G 3 ? ? N7 A G 3 ? ? C8 A G 3 ? ? 100.29 104.30 -4.01 0.50 N 12 1 N7 A G 3 ? ? C8 A G 3 ? ? N9 A G 3 ? ? 118.41 113.10 5.31 0.50 N 13 1 "C3'" A G 3 ? ? "O3'" A G 3 ? ? P A U 4 ? ? 127.07 119.70 7.37 1.20 Y 14 1 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.39 108.50 4.89 0.70 N 15 1 "C5'" A G 5 ? ? "C4'" A G 5 ? ? "O4'" A G 5 ? ? 117.55 109.80 7.75 0.90 N 16 1 "C3'" A G 5 ? ? "C2'" A G 5 ? ? "C1'" A G 5 ? ? 107.60 101.50 6.10 0.80 N 17 1 C5 A G 5 ? ? N7 A G 5 ? ? C8 A G 5 ? ? 100.19 104.30 -4.11 0.50 N 18 1 N7 A G 5 ? ? C8 A G 5 ? ? N9 A G 5 ? ? 118.80 113.10 5.70 0.50 N 19 1 "C5'" A U 7 ? ? "C4'" A U 7 ? ? "O4'" A U 7 ? ? 123.47 109.80 13.67 0.90 N 20 1 "C4'" A U 7 ? ? "C3'" A U 7 ? ? "C2'" A U 7 ? ? 95.48 102.60 -7.12 1.00 N 21 1 "C3'" A C 8 ? ? "C2'" A C 8 ? ? "C1'" A C 8 ? ? 106.86 101.50 5.36 0.80 N 22 1 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.06 108.50 4.56 0.70 N 23 1 N7 A G 9 ? ? C8 A G 9 ? ? N9 A G 9 ? ? 116.50 113.10 3.40 0.50 N 24 1 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 112.78 108.50 4.28 0.70 N 25 1 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 117.79 108.50 9.29 0.70 N 26 1 "C5'" A C 13 ? ? "C4'" A C 13 ? ? "O4'" A C 13 ? ? 117.28 109.80 7.48 0.90 N 27 1 "O4'" A C 13 ? ? "C1'" A C 13 ? ? "C2'" A C 13 ? ? 94.76 105.80 -11.04 1.00 N 28 1 "C5'" A A 14 ? ? "C4'" A A 14 ? ? "O4'" A A 14 ? ? 117.17 109.80 7.37 0.90 N 29 1 "C2'" A A 14 ? ? "C3'" A A 14 ? ? "O3'" A A 14 ? ? 125.64 113.70 11.94 1.60 N 30 1 N7 A A 14 ? ? C8 A A 14 ? ? N9 A A 14 ? ? 116.89 113.80 3.09 0.50 N 31 1 "C3'" A C 15 ? ? "C2'" A C 15 ? ? "C1'" A C 15 ? ? 109.45 101.50 7.95 0.80 N 32 1 N1 A C 15 ? ? "C1'" A C 15 ? ? "C2'" A C 15 ? ? 105.28 112.00 -6.72 1.10 N 33 1 N3 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 123.11 118.00 5.11 0.70 N 34 1 C5 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 115.31 120.20 -4.89 0.70 N 35 1 "C3'" A C 15 ? ? "O3'" A C 15 ? ? P A A 16 ? ? 129.11 119.70 9.41 1.20 Y 36 1 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 105.25 109.70 -4.45 0.70 N 37 1 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 108.35 101.50 6.85 0.80 N 38 1 N9 A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 102.28 112.00 -9.72 1.10 N 39 1 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 121.48 108.50 12.98 0.70 N 40 1 "C1'" A G 17 ? ? "O4'" A G 17 ? ? "C4'" A G 17 ? ? 103.90 109.70 -5.80 0.70 N 41 1 N9 A G 17 ? ? "C1'" A G 17 ? ? "C2'" A G 17 ? ? 93.63 112.00 -18.37 1.10 N 42 1 C5 A G 17 ? ? N7 A G 17 ? ? C8 A G 17 ? ? 100.49 104.30 -3.81 0.50 N 43 1 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 116.11 113.10 3.01 0.50 N 44 2 "C1'" A C 1 ? ? "O4'" A C 1 ? ? "C4'" A C 1 ? ? 104.94 109.70 -4.76 0.70 N 45 2 "C2'" A C 1 ? ? "C3'" A C 1 ? ? "O3'" A C 1 ? ? 123.87 113.70 10.17 1.60 N 46 2 "C4'" A C 1 ? ? "C3'" A C 1 ? ? "C2'" A C 1 ? ? 96.12 102.60 -6.48 1.00 N 47 2 "O4'" A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 96.52 105.80 -9.28 1.00 N 48 2 "O4'" A C 1 ? ? "C1'" A C 1 ? ? N1 A C 1 ? ? 120.44 108.50 11.94 0.70 N 49 2 P A U 2 ? ? "O5'" A U 2 ? ? "C5'" A U 2 ? ? 132.21 120.90 11.31 1.60 N 50 2 "C5'" A U 2 ? ? "C4'" A U 2 ? ? "O4'" A U 2 ? ? 115.24 109.80 5.44 0.90 N 51 2 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 110.33 101.50 8.83 0.80 N 52 2 N9 A G 3 ? ? "C1'" A G 3 ? ? "C2'" A G 3 ? ? 99.46 112.00 -12.54 1.10 N 53 2 "O4'" A G 3 ? ? "C1'" A G 3 ? ? N9 A G 3 ? ? 113.16 108.50 4.66 0.70 N 54 2 C5 A G 3 ? ? N7 A G 3 ? ? C8 A G 3 ? ? 100.18 104.30 -4.12 0.50 N 55 2 N7 A G 3 ? ? C8 A G 3 ? ? N9 A G 3 ? ? 118.65 113.10 5.55 0.50 N 56 2 "C3'" A G 3 ? ? "O3'" A G 3 ? ? P A U 4 ? ? 126.99 119.70 7.29 1.20 Y 57 2 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.17 108.50 4.67 0.70 N 58 2 N9 A G 5 ? ? "C1'" A G 5 ? ? "C2'" A G 5 ? ? 102.49 112.00 -9.51 1.10 N 59 2 C5 A G 5 ? ? N7 A G 5 ? ? C8 A G 5 ? ? 100.10 104.30 -4.20 0.50 N 60 2 N7 A G 5 ? ? C8 A G 5 ? ? N9 A G 5 ? ? 118.46 113.10 5.36 0.50 N 61 2 "C5'" A U 7 ? ? "C4'" A U 7 ? ? "O4'" A U 7 ? ? 119.81 109.80 10.01 0.90 N 62 2 "C4'" A U 7 ? ? "C3'" A U 7 ? ? "C2'" A U 7 ? ? 94.86 102.60 -7.74 1.00 N 63 2 "C3'" A C 8 ? ? "O3'" A C 8 ? ? P A G 9 ? ? 127.59 119.70 7.89 1.20 Y 64 2 N7 A G 9 ? ? C8 A G 9 ? ? N9 A G 9 ? ? 116.56 113.10 3.46 0.50 N 65 2 "C3'" A G 9 ? ? "O3'" A G 9 ? ? P A A 10 ? ? 126.90 119.70 7.20 1.20 Y 66 2 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 113.21 108.50 4.71 0.70 N 67 2 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 119.15 108.50 10.65 0.70 N 68 2 "C5'" A C 13 ? ? "C4'" A C 13 ? ? "O4'" A C 13 ? ? 123.50 109.80 13.70 0.90 N 69 2 "C5'" A A 14 ? ? "C4'" A A 14 ? ? "O4'" A A 14 ? ? 117.06 109.80 7.26 0.90 N 70 2 N7 A A 14 ? ? C8 A A 14 ? ? N9 A A 14 ? ? 116.86 113.80 3.06 0.50 N 71 2 "C3'" A C 15 ? ? "C2'" A C 15 ? ? "C1'" A C 15 ? ? 108.46 101.50 6.96 0.80 N 72 2 N1 A C 15 ? ? "C1'" A C 15 ? ? "C2'" A C 15 ? ? 104.26 112.00 -7.74 1.10 N 73 2 "O4'" A C 15 ? ? "C1'" A C 15 ? ? N1 A C 15 ? ? 113.45 108.50 4.95 0.70 N 74 2 N3 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 122.77 118.00 4.77 0.70 N 75 2 "C3'" A C 15 ? ? "O3'" A C 15 ? ? P A A 16 ? ? 128.64 119.70 8.94 1.20 Y 76 2 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 105.25 109.70 -4.45 0.70 N 77 2 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 107.44 101.50 5.94 0.80 N 78 2 N9 A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 100.70 112.00 -11.30 1.10 N 79 2 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 124.13 108.50 15.63 0.70 N 80 2 P A G 17 ? ? "O5'" A G 17 ? ? "C5'" A G 17 ? ? 131.07 120.90 10.17 1.60 N 81 2 "C1'" A G 17 ? ? "O4'" A G 17 ? ? "C4'" A G 17 ? ? 101.97 109.70 -7.73 0.70 N 82 2 N9 A G 17 ? ? "C1'" A G 17 ? ? "C2'" A G 17 ? ? 96.51 112.00 -15.49 1.10 N 83 2 C5 A G 17 ? ? N7 A G 17 ? ? C8 A G 17 ? ? 99.88 104.30 -4.42 0.50 N 84 2 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 116.70 113.10 3.60 0.50 N 85 3 "C1'" A C 1 ? ? "O4'" A C 1 ? ? "C4'" A C 1 ? ? 104.56 109.70 -5.14 0.70 N 86 3 "C3'" A C 1 ? ? "C2'" A C 1 ? ? "C1'" A C 1 ? ? 109.48 101.50 7.98 0.80 N 87 3 N1 A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 101.83 112.00 -10.17 1.10 N 88 3 "O4'" A C 1 ? ? "C1'" A C 1 ? ? N1 A C 1 ? ? 119.52 108.50 11.02 0.70 N 89 3 N3 A C 1 ? ? C4 A C 1 ? ? N4 A C 1 ? ? 122.41 118.00 4.41 0.70 N 90 3 "C3'" A C 1 ? ? "O3'" A C 1 ? ? P A U 2 ? ? 127.77 119.70 8.07 1.20 Y 91 3 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 110.50 101.50 9.00 0.80 N 92 3 N9 A G 3 ? ? "C1'" A G 3 ? ? "C2'" A G 3 ? ? 99.50 112.00 -12.50 1.10 N 93 3 "O4'" A G 3 ? ? "C1'" A G 3 ? ? N9 A G 3 ? ? 115.00 108.50 6.50 0.70 N 94 3 C5 A G 3 ? ? N7 A G 3 ? ? C8 A G 3 ? ? 100.33 104.30 -3.97 0.50 N 95 3 N7 A G 3 ? ? C8 A G 3 ? ? N9 A G 3 ? ? 118.41 113.10 5.31 0.50 N 96 3 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 115.15 108.50 6.65 0.70 N 97 3 "C3'" A U 4 ? ? "O3'" A U 4 ? ? P A G 5 ? ? 130.72 119.70 11.02 1.20 Y 98 3 "C3'" A G 5 ? ? "C2'" A G 5 ? ? "C1'" A G 5 ? ? 106.73 101.50 5.23 0.80 N 99 3 C5 A G 5 ? ? N7 A G 5 ? ? C8 A G 5 ? ? 100.25 104.30 -4.05 0.50 N 100 3 N7 A G 5 ? ? C8 A G 5 ? ? N9 A G 5 ? ? 118.31 113.10 5.21 0.50 N 101 3 "C5'" A U 7 ? ? "C4'" A U 7 ? ? "O4'" A U 7 ? ? 119.39 109.80 9.59 0.90 N 102 3 "C4'" A U 7 ? ? "C3'" A U 7 ? ? "C2'" A U 7 ? ? 95.57 102.60 -7.03 1.00 N 103 3 N1 A U 7 ? ? "C1'" A U 7 ? ? "C2'" A U 7 ? ? 102.84 112.00 -9.16 1.10 N 104 3 "C3'" A C 8 ? ? "C2'" A C 8 ? ? "C1'" A C 8 ? ? 109.74 101.50 8.24 0.80 N 105 3 N7 A G 9 ? ? C8 A G 9 ? ? N9 A G 9 ? ? 116.61 113.10 3.51 0.50 N 106 3 "C3'" A G 9 ? ? "O3'" A G 9 ? ? P A A 10 ? ? 128.16 119.70 8.46 1.20 Y 107 3 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 114.92 108.50 6.42 0.70 N 108 3 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 117.87 108.50 9.37 0.70 N 109 3 "C5'" A C 13 ? ? "C4'" A C 13 ? ? "O4'" A C 13 ? ? 122.04 109.80 12.24 0.90 N 110 3 "C2'" A C 13 ? ? "C3'" A C 13 ? ? "O3'" A C 13 ? ? 123.38 113.70 9.68 1.60 N 111 3 "C5'" A A 14 ? ? "C4'" A A 14 ? ? "O4'" A A 14 ? ? 116.94 109.80 7.14 0.90 N 112 3 "C2'" A A 14 ? ? "C3'" A A 14 ? ? "O3'" A A 14 ? ? 124.18 113.70 10.48 1.60 N 113 3 N7 A A 14 ? ? C8 A A 14 ? ? N9 A A 14 ? ? 117.01 113.80 3.21 0.50 N 114 3 "C3'" A C 15 ? ? "C2'" A C 15 ? ? "C1'" A C 15 ? ? 108.78 101.50 7.28 0.80 N 115 3 N1 A C 15 ? ? "C1'" A C 15 ? ? "C2'" A C 15 ? ? 103.02 112.00 -8.98 1.10 N 116 3 "O4'" A C 15 ? ? "C1'" A C 15 ? ? N1 A C 15 ? ? 114.69 108.50 6.19 0.70 N 117 3 N3 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 123.09 118.00 5.09 0.70 N 118 3 C5 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 115.64 120.20 -4.56 0.70 N 119 3 "C3'" A C 15 ? ? "O3'" A C 15 ? ? P A A 16 ? ? 128.16 119.70 8.46 1.20 Y 120 3 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 107.46 101.50 5.96 0.80 N 121 3 "O4'" A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 98.66 105.80 -7.14 1.00 N 122 3 N9 A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 102.40 112.00 -9.60 1.10 N 123 3 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.95 108.50 8.45 0.70 N 124 3 "C1'" A G 17 ? ? "O4'" A G 17 ? ? "C4'" A G 17 ? ? 105.10 109.70 -4.60 0.70 N 125 3 N9 A G 17 ? ? "C1'" A G 17 ? ? "C2'" A G 17 ? ? 94.15 112.00 -17.85 1.10 N 126 3 C5 A G 17 ? ? N7 A G 17 ? ? C8 A G 17 ? ? 100.36 104.30 -3.94 0.50 N 127 3 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 116.60 113.10 3.50 0.50 N 128 4 "C1'" A C 1 ? ? "O4'" A C 1 ? ? "C4'" A C 1 ? ? 102.90 109.70 -6.80 0.70 N 129 4 "C3'" A C 1 ? ? "C2'" A C 1 ? ? "C1'" A C 1 ? ? 109.04 101.50 7.54 0.80 N 130 4 N1 A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 102.50 112.00 -9.50 1.10 N 131 4 "O4'" A C 1 ? ? "C1'" A C 1 ? ? N1 A C 1 ? ? 119.85 108.50 11.35 0.70 N 132 4 N3 A C 1 ? ? C4 A C 1 ? ? N4 A C 1 ? ? 122.85 118.00 4.85 0.70 N 133 4 C5 A C 1 ? ? C4 A C 1 ? ? N4 A C 1 ? ? 115.39 120.20 -4.81 0.70 N 134 4 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 110.08 101.50 8.58 0.80 N 135 4 N9 A G 3 ? ? "C1'" A G 3 ? ? "C2'" A G 3 ? ? 99.89 112.00 -12.11 1.10 N 136 4 "O4'" A G 3 ? ? "C1'" A G 3 ? ? N9 A G 3 ? ? 114.04 108.50 5.54 0.70 N 137 4 C5 A G 3 ? ? N7 A G 3 ? ? C8 A G 3 ? ? 100.14 104.30 -4.16 0.50 N 138 4 N7 A G 3 ? ? C8 A G 3 ? ? N9 A G 3 ? ? 118.49 113.10 5.39 0.50 N 139 4 "C3'" A G 3 ? ? "O3'" A G 3 ? ? P A U 4 ? ? 127.18 119.70 7.48 1.20 Y 140 4 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.40 108.50 4.90 0.70 N 141 4 "C3'" A G 5 ? ? "C2'" A G 5 ? ? "C1'" A G 5 ? ? 106.67 101.50 5.17 0.80 N 142 4 N9 A G 5 ? ? "C1'" A G 5 ? ? "C2'" A G 5 ? ? 105.29 112.00 -6.71 1.10 N 143 4 C5 A G 5 ? ? N7 A G 5 ? ? C8 A G 5 ? ? 99.91 104.30 -4.39 0.50 N 144 4 N7 A G 5 ? ? C8 A G 5 ? ? N9 A G 5 ? ? 118.88 113.10 5.78 0.50 N 145 4 "C5'" A U 7 ? ? "C4'" A U 7 ? ? "O4'" A U 7 ? ? 121.02 109.80 11.22 0.90 N 146 4 "C4'" A U 7 ? ? "C3'" A U 7 ? ? "C2'" A U 7 ? ? 95.43 102.60 -7.17 1.00 N 147 4 "C3'" A C 8 ? ? "C2'" A C 8 ? ? "C1'" A C 8 ? ? 106.56 101.50 5.06 0.80 N 148 4 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.40 108.50 4.90 0.70 N 149 4 "C3'" A C 8 ? ? "O3'" A C 8 ? ? P A G 9 ? ? 127.24 119.70 7.54 1.20 Y 150 4 N7 A G 9 ? ? C8 A G 9 ? ? N9 A G 9 ? ? 116.61 113.10 3.51 0.50 N 151 4 "C3'" A A 10 ? ? "O3'" A A 10 ? ? P A U 11 ? ? 128.33 119.70 8.63 1.20 Y 152 4 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 117.87 108.50 9.37 0.70 N 153 4 "C5'" A C 13 ? ? "C4'" A C 13 ? ? "O4'" A C 13 ? ? 123.99 109.80 14.19 0.90 N 154 4 "C2'" A C 13 ? ? "C3'" A C 13 ? ? "O3'" A C 13 ? ? 127.12 113.70 13.42 1.60 N 155 4 "C4'" A C 13 ? ? "C3'" A C 13 ? ? "C2'" A C 13 ? ? 96.37 102.60 -6.23 1.00 N 156 4 N1 A C 13 ? ? "C1'" A C 13 ? ? "C2'" A C 13 ? ? 104.68 112.00 -7.32 1.10 N 157 4 "C5'" A A 14 ? ? "C4'" A A 14 ? ? "O4'" A A 14 ? ? 115.24 109.80 5.44 0.90 N 158 4 "C2'" A A 14 ? ? "C3'" A A 14 ? ? "O3'" A A 14 ? ? 124.58 113.70 10.88 1.60 N 159 4 "C3'" A A 14 ? ? "C2'" A A 14 ? ? "C1'" A A 14 ? ? 106.62 101.50 5.12 0.80 N 160 4 N7 A A 14 ? ? C8 A A 14 ? ? N9 A A 14 ? ? 117.23 113.80 3.43 0.50 N 161 4 "C3'" A C 15 ? ? "C2'" A C 15 ? ? "C1'" A C 15 ? ? 109.95 101.50 8.45 0.80 N 162 4 "O4'" A C 15 ? ? "C1'" A C 15 ? ? N1 A C 15 ? ? 112.88 108.50 4.38 0.70 N 163 4 N3 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 122.99 118.00 4.99 0.70 N 164 4 C5 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 115.76 120.20 -4.44 0.70 N 165 4 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 109.68 101.50 8.18 0.80 N 166 4 N9 A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 98.37 112.00 -13.63 1.10 N 167 4 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 121.98 108.50 13.48 0.70 N 168 4 "C1'" A G 17 ? ? "O4'" A G 17 ? ? "C4'" A G 17 ? ? 101.90 109.70 -7.80 0.70 N 169 4 N9 A G 17 ? ? "C1'" A G 17 ? ? "C2'" A G 17 ? ? 96.47 112.00 -15.53 1.10 N 170 4 C5 A G 17 ? ? N7 A G 17 ? ? C8 A G 17 ? ? 99.91 104.30 -4.39 0.50 N 171 4 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 117.17 113.10 4.07 0.50 N 172 5 "C1'" A C 1 ? ? "O4'" A C 1 ? ? "C4'" A C 1 ? ? 103.38 109.70 -6.32 0.70 N 173 5 "C3'" A C 1 ? ? "C2'" A C 1 ? ? "C1'" A C 1 ? ? 109.63 101.50 8.13 0.80 N 174 5 N1 A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 102.38 112.00 -9.62 1.10 N 175 5 "O4'" A C 1 ? ? "C1'" A C 1 ? ? N1 A C 1 ? ? 121.69 108.50 13.19 0.70 N 176 5 "C3'" A C 1 ? ? "O3'" A C 1 ? ? P A U 2 ? ? 129.73 119.70 10.03 1.20 Y 177 5 "C3'" A U 2 ? ? "O3'" A U 2 ? ? P A G 3 ? ? 128.74 119.70 9.04 1.20 Y 178 5 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 108.31 101.50 6.81 0.80 N 179 5 N9 A G 3 ? ? "C1'" A G 3 ? ? "C2'" A G 3 ? ? 100.37 112.00 -11.63 1.10 N 180 5 C5 A G 3 ? ? N7 A G 3 ? ? C8 A G 3 ? ? 100.21 104.30 -4.09 0.50 N 181 5 N7 A G 3 ? ? C8 A G 3 ? ? N9 A G 3 ? ? 117.89 113.10 4.79 0.50 N 182 5 N3 A G 3 ? ? C2 A G 3 ? ? N2 A G 3 ? ? 124.31 119.90 4.41 0.70 N 183 5 "O4'" A U 4 ? ? "C1'" A U 4 ? ? "C2'" A U 4 ? ? 99.49 105.80 -6.31 1.00 N 184 5 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 119.23 108.50 10.73 0.70 N 185 5 N9 A G 5 ? ? "C1'" A G 5 ? ? "C2'" A G 5 ? ? 103.71 112.00 -8.29 1.10 N 186 5 C5 A G 5 ? ? N7 A G 5 ? ? C8 A G 5 ? ? 100.29 104.30 -4.01 0.50 N 187 5 N7 A G 5 ? ? C8 A G 5 ? ? N9 A G 5 ? ? 118.24 113.10 5.14 0.50 N 188 5 C4 A G 5 ? ? N9 A G 5 ? ? "C1'" A G 5 ? ? 134.78 126.50 8.28 1.30 N 189 5 "C5'" A U 7 ? ? "C4'" A U 7 ? ? "O4'" A U 7 ? ? 120.57 109.80 10.77 0.90 N 190 5 "C4'" A U 7 ? ? "C3'" A U 7 ? ? "C2'" A U 7 ? ? 95.49 102.60 -7.11 1.00 N 191 5 "C3'" A C 8 ? ? "C2'" A C 8 ? ? "C1'" A C 8 ? ? 107.75 101.50 6.25 0.80 N 192 5 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 112.84 108.50 4.34 0.70 N 193 5 "C3'" A C 8 ? ? "O3'" A C 8 ? ? P A G 9 ? ? 127.03 119.70 7.33 1.20 Y 194 5 N7 A G 9 ? ? C8 A G 9 ? ? N9 A G 9 ? ? 116.76 113.10 3.66 0.50 N 195 5 "C3'" A G 9 ? ? "O3'" A G 9 ? ? P A A 10 ? ? 127.57 119.70 7.87 1.20 Y 196 5 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 113.93 108.50 5.43 0.70 N 197 5 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 117.44 108.50 8.94 0.70 N 198 5 P A C 13 ? ? "O5'" A C 13 ? ? "C5'" A C 13 ? ? 130.81 120.90 9.91 1.60 N 199 5 "C5'" A C 13 ? ? "C4'" A C 13 ? ? "O4'" A C 13 ? ? 116.76 109.80 6.96 0.90 N 200 5 "C1'" A C 13 ? ? "O4'" A C 13 ? ? "C4'" A C 13 ? ? 105.13 109.70 -4.57 0.70 N 201 5 "O4'" A C 13 ? ? "C1'" A C 13 ? ? "C2'" A C 13 ? ? 93.31 105.80 -12.49 1.00 N 202 5 "C3'" A C 13 ? ? "O3'" A C 13 ? ? P A A 14 ? ? 128.63 119.70 8.93 1.20 Y 203 5 "C5'" A A 14 ? ? "C4'" A A 14 ? ? "O4'" A A 14 ? ? 115.51 109.80 5.71 0.90 N 204 5 "C2'" A A 14 ? ? "C3'" A A 14 ? ? "O3'" A A 14 ? ? 125.48 113.70 11.78 1.60 N 205 5 N7 A A 14 ? ? C8 A A 14 ? ? N9 A A 14 ? ? 117.03 113.80 3.23 0.50 N 206 5 "C3'" A C 15 ? ? "C2'" A C 15 ? ? "C1'" A C 15 ? ? 109.63 101.50 8.13 0.80 N 207 5 N3 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 122.77 118.00 4.77 0.70 N 208 5 C5 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 115.76 120.20 -4.44 0.70 N 209 5 "C3'" A C 15 ? ? "O3'" A C 15 ? ? P A A 16 ? ? 128.82 119.70 9.12 1.20 Y 210 5 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 107.82 101.50 6.32 0.80 N 211 5 N9 A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 102.12 112.00 -9.88 1.10 N 212 5 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 120.19 108.50 11.69 0.70 N 213 5 "C1'" A G 17 ? ? "O4'" A G 17 ? ? "C4'" A G 17 ? ? 105.11 109.70 -4.59 0.70 N 214 5 N9 A G 17 ? ? "C1'" A G 17 ? ? "C2'" A G 17 ? ? 93.66 112.00 -18.34 1.10 N 215 5 C5 A G 17 ? ? N7 A G 17 ? ? C8 A G 17 ? ? 100.28 104.30 -4.02 0.50 N 216 5 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 116.51 113.10 3.41 0.50 N 217 6 "C1'" A C 1 ? ? "O4'" A C 1 ? ? "C4'" A C 1 ? ? 103.48 109.70 -6.22 0.70 N 218 6 "C3'" A C 1 ? ? "C2'" A C 1 ? ? "C1'" A C 1 ? ? 109.88 101.50 8.38 0.80 N 219 6 "O4'" A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 99.46 105.80 -6.34 1.00 N 220 6 N1 A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 101.41 112.00 -10.59 1.10 N 221 6 "O4'" A C 1 ? ? "C1'" A C 1 ? ? N1 A C 1 ? ? 121.96 108.50 13.46 0.70 N 222 6 "C3'" A C 1 ? ? "O3'" A C 1 ? ? P A U 2 ? ? 129.87 119.70 10.17 1.20 Y 223 6 "C1'" A U 2 ? ? "O4'" A U 2 ? ? "C4'" A U 2 ? ? 104.81 109.70 -4.89 0.70 N 224 6 "O4'" A U 2 ? ? "C1'" A U 2 ? ? N1 A U 2 ? ? 113.51 108.50 5.01 0.70 N 225 6 "C5'" A G 3 ? ? "C4'" A G 3 ? ? "O4'" A G 3 ? ? 116.52 109.80 6.72 0.90 N 226 6 "C1'" A G 3 ? ? "O4'" A G 3 ? ? "C4'" A G 3 ? ? 102.51 109.70 -7.19 0.70 N 227 6 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 109.94 101.50 8.44 0.80 N 228 6 N9 A G 3 ? ? "C1'" A G 3 ? ? "C2'" A G 3 ? ? 100.12 112.00 -11.88 1.10 N 229 6 "O4'" A G 3 ? ? "C1'" A G 3 ? ? N9 A G 3 ? ? 118.68 108.50 10.18 0.70 N 230 6 C5 A G 3 ? ? N7 A G 3 ? ? C8 A G 3 ? ? 100.27 104.30 -4.03 0.50 N 231 6 N7 A G 3 ? ? C8 A G 3 ? ? N9 A G 3 ? ? 118.53 113.10 5.43 0.50 N 232 6 "C3'" A G 3 ? ? "O3'" A G 3 ? ? P A U 4 ? ? 127.72 119.70 8.02 1.20 Y 233 6 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 115.40 108.50 6.90 0.70 N 234 6 "C3'" A U 4 ? ? "O3'" A U 4 ? ? P A G 5 ? ? 130.38 119.70 10.68 1.20 Y 235 6 N9 A G 5 ? ? "C1'" A G 5 ? ? "C2'" A G 5 ? ? 102.11 112.00 -9.89 1.10 N 236 6 C5 A G 5 ? ? N7 A G 5 ? ? C8 A G 5 ? ? 100.07 104.30 -4.23 0.50 N 237 6 N7 A G 5 ? ? C8 A G 5 ? ? N9 A G 5 ? ? 118.26 113.10 5.16 0.50 N 238 6 "C3'" A 5MU 6 ? ? "O3'" A 5MU 6 ? ? P A U 7 ? ? 127.01 119.70 7.31 1.20 Y 239 6 "C5'" A U 7 ? ? "C4'" A U 7 ? ? "O4'" A U 7 ? ? 118.59 109.80 8.79 0.90 N 240 6 "C4'" A U 7 ? ? "C3'" A U 7 ? ? "C2'" A U 7 ? ? 95.27 102.60 -7.33 1.00 N 241 6 "C3'" A C 8 ? ? "C2'" A C 8 ? ? "C1'" A C 8 ? ? 106.92 101.50 5.42 0.80 N 242 6 N7 A G 9 ? ? C8 A G 9 ? ? N9 A G 9 ? ? 116.39 113.10 3.29 0.50 N 243 6 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 114.45 108.50 5.95 0.70 N 244 6 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 118.08 108.50 9.58 0.70 N 245 6 "C5'" A C 13 ? ? "C4'" A C 13 ? ? "O4'" A C 13 ? ? 122.32 109.80 12.52 0.90 N 246 6 "C3'" A A 14 ? ? "C2'" A A 14 ? ? "C1'" A A 14 ? ? 107.60 101.50 6.10 0.80 N 247 6 N9 A A 14 ? ? "C1'" A A 14 ? ? "C2'" A A 14 ? ? 104.39 112.00 -7.61 1.10 N 248 6 N7 A A 14 ? ? C8 A A 14 ? ? N9 A A 14 ? ? 117.79 113.80 3.99 0.50 N 249 6 "C3'" A C 15 ? ? "C2'" A C 15 ? ? "C1'" A C 15 ? ? 109.02 101.50 7.52 0.80 N 250 6 N1 A C 15 ? ? "C1'" A C 15 ? ? "C2'" A C 15 ? ? 104.90 112.00 -7.10 1.10 N 251 6 "O4'" A C 15 ? ? "C1'" A C 15 ? ? N1 A C 15 ? ? 114.05 108.50 5.55 0.70 N 252 6 "C3'" A C 15 ? ? "O3'" A C 15 ? ? P A A 16 ? ? 128.39 119.70 8.69 1.20 Y 253 6 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 106.97 101.50 5.47 0.80 N 254 6 "O4'" A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 98.57 105.80 -7.23 1.00 N 255 6 N9 A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 102.18 112.00 -9.82 1.10 N 256 6 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.65 108.50 8.15 0.70 N 257 6 N9 A G 17 ? ? "C1'" A G 17 ? ? "C2'" A G 17 ? ? 91.28 112.00 -20.72 1.10 N 258 6 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 115.20 108.50 6.70 0.70 N 259 6 C5 A G 17 ? ? N7 A G 17 ? ? C8 A G 17 ? ? 100.51 104.30 -3.79 0.50 N 260 6 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 116.51 113.10 3.41 0.50 N 261 7 "C1'" A C 1 ? ? "O4'" A C 1 ? ? "C4'" A C 1 ? ? 103.98 109.70 -5.72 0.70 N 262 7 N1 A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 104.08 112.00 -7.92 1.10 N 263 7 "O4'" A C 1 ? ? "C1'" A C 1 ? ? N1 A C 1 ? ? 120.49 108.50 11.99 0.70 N 264 7 N3 A C 1 ? ? C4 A C 1 ? ? N4 A C 1 ? ? 122.70 118.00 4.70 0.70 N 265 7 C5 A C 1 ? ? C4 A C 1 ? ? N4 A C 1 ? ? 115.87 120.20 -4.33 0.70 N 266 7 "C3'" A C 1 ? ? "O3'" A C 1 ? ? P A U 2 ? ? 127.05 119.70 7.35 1.20 Y 267 7 "C5'" A U 2 ? ? "C4'" A U 2 ? ? "O4'" A U 2 ? ? 116.33 109.80 6.53 0.90 N 268 7 "O4'" A U 2 ? ? "C1'" A U 2 ? ? "C2'" A U 2 ? ? 98.87 105.80 -6.93 1.00 N 269 7 "O4'" A U 2 ? ? "C1'" A U 2 ? ? N1 A U 2 ? ? 113.96 108.50 5.46 0.70 N 270 7 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 110.29 101.50 8.79 0.80 N 271 7 N9 A G 3 ? ? "C1'" A G 3 ? ? "C2'" A G 3 ? ? 98.77 112.00 -13.23 1.10 N 272 7 "O4'" A G 3 ? ? "C1'" A G 3 ? ? N9 A G 3 ? ? 113.50 108.50 5.00 0.70 N 273 7 C5 A G 3 ? ? N7 A G 3 ? ? C8 A G 3 ? ? 100.17 104.30 -4.13 0.50 N 274 7 N7 A G 3 ? ? C8 A G 3 ? ? N9 A G 3 ? ? 118.50 113.10 5.40 0.50 N 275 7 "C3'" A G 3 ? ? "O3'" A G 3 ? ? P A U 4 ? ? 127.11 119.70 7.41 1.20 Y 276 7 "C3'" A U 4 ? ? "C2'" A U 4 ? ? "C1'" A U 4 ? ? 106.37 101.50 4.87 0.80 N 277 7 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.65 108.50 5.15 0.70 N 278 7 "C3'" A U 4 ? ? "O3'" A U 4 ? ? P A G 5 ? ? 128.07 119.70 8.37 1.20 Y 279 7 "C2'" A G 5 ? ? "C3'" A G 5 ? ? "O3'" A G 5 ? ? 126.05 113.70 12.35 1.60 N 280 7 "C4'" A G 5 ? ? "C3'" A G 5 ? ? "C2'" A G 5 ? ? 108.84 102.60 6.24 1.00 N 281 7 N9 A G 5 ? ? "C1'" A G 5 ? ? "C2'" A G 5 ? ? 104.99 112.00 -7.01 1.10 N 282 7 C5 A G 5 ? ? N7 A G 5 ? ? C8 A G 5 ? ? 99.90 104.30 -4.40 0.50 N 283 7 N7 A G 5 ? ? C8 A G 5 ? ? N9 A G 5 ? ? 118.36 113.10 5.26 0.50 N 284 7 "C3'" A G 5 ? ? "O3'" A G 5 ? ? P A 5MU 6 ? ? 128.64 119.70 8.94 1.20 Y 285 7 "C3'" A 5MU 6 ? ? "O3'" A 5MU 6 ? ? P A U 7 ? ? 127.27 119.70 7.57 1.20 Y 286 7 "C5'" A U 7 ? ? "C4'" A U 7 ? ? "O4'" A U 7 ? ? 122.37 109.80 12.57 0.90 N 287 7 "C4'" A U 7 ? ? "C3'" A U 7 ? ? "C2'" A U 7 ? ? 94.20 102.60 -8.40 1.00 N 288 7 "C3'" A C 8 ? ? "C2'" A C 8 ? ? "C1'" A C 8 ? ? 107.69 101.50 6.19 0.80 N 289 7 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.49 108.50 4.99 0.70 N 290 7 N7 A G 9 ? ? C8 A G 9 ? ? N9 A G 9 ? ? 116.72 113.10 3.62 0.50 N 291 7 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 113.00 108.50 4.50 0.70 N 292 7 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 118.56 108.50 10.06 0.70 N 293 7 "C3'" A CH 12 ? ? "O3'" A CH 12 ? ? P A C 13 ? ? 127.21 119.70 7.51 1.20 Y 294 7 "C5'" A C 13 ? ? "C4'" A C 13 ? ? "O4'" A C 13 ? ? 116.92 109.80 7.12 0.90 N 295 7 "C3'" A C 13 ? ? "O3'" A C 13 ? ? P A A 14 ? ? 129.35 119.70 9.65 1.20 Y 296 7 "C5'" A A 14 ? ? "C4'" A A 14 ? ? "O4'" A A 14 ? ? 119.48 109.80 9.68 0.90 N 297 7 "C2'" A A 14 ? ? "C3'" A A 14 ? ? "O3'" A A 14 ? ? 127.79 113.70 14.09 1.60 N 298 7 "C3'" A C 15 ? ? "C2'" A C 15 ? ? "C1'" A C 15 ? ? 109.42 101.50 7.92 0.80 N 299 7 N1 A C 15 ? ? "C1'" A C 15 ? ? "C2'" A C 15 ? ? 104.02 112.00 -7.98 1.10 N 300 7 N3 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 123.37 118.00 5.37 0.70 N 301 7 C5 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 115.32 120.20 -4.88 0.70 N 302 7 "C3'" A C 15 ? ? "O3'" A C 15 ? ? P A A 16 ? ? 128.66 119.70 8.96 1.20 Y 303 7 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 108.33 101.50 6.83 0.80 N 304 7 "O4'" A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 98.77 105.80 -7.03 1.00 N 305 7 N9 A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 102.30 112.00 -9.70 1.10 N 306 7 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 118.48 108.50 9.98 0.70 N 307 7 "C1'" A G 17 ? ? "O4'" A G 17 ? ? "C4'" A G 17 ? ? 104.29 109.70 -5.41 0.70 N 308 7 N9 A G 17 ? ? "C1'" A G 17 ? ? "C2'" A G 17 ? ? 94.03 112.00 -17.97 1.10 N 309 7 C5 A G 17 ? ? N7 A G 17 ? ? C8 A G 17 ? ? 100.25 104.30 -4.05 0.50 N 310 7 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 116.53 113.10 3.43 0.50 N 311 8 "C1'" A C 1 ? ? "O4'" A C 1 ? ? "C4'" A C 1 ? ? 102.70 109.70 -7.00 0.70 N 312 8 "C3'" A C 1 ? ? "C2'" A C 1 ? ? "C1'" A C 1 ? ? 109.73 101.50 8.23 0.80 N 313 8 "O4'" A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 99.31 105.80 -6.49 1.00 N 314 8 N1 A C 1 ? ? "C1'" A C 1 ? ? "C2'" A C 1 ? ? 100.78 112.00 -11.22 1.10 N 315 8 "O4'" A C 1 ? ? "C1'" A C 1 ? ? N1 A C 1 ? ? 123.73 108.50 15.23 0.70 N 316 8 N3 A C 1 ? ? C4 A C 1 ? ? N4 A C 1 ? ? 122.52 118.00 4.52 0.70 N 317 8 "C3'" A C 1 ? ? "O3'" A C 1 ? ? P A U 2 ? ? 130.05 119.70 10.35 1.20 Y 318 8 "C5'" A U 2 ? ? "C4'" A U 2 ? ? "O4'" A U 2 ? ? 115.37 109.80 5.57 0.90 N 319 8 "C1'" A U 2 ? ? "O4'" A U 2 ? ? "C4'" A U 2 ? ? 105.32 109.70 -4.38 0.70 N 320 8 "O4'" A U 2 ? ? "C1'" A U 2 ? ? N1 A U 2 ? ? 113.77 108.50 5.27 0.70 N 321 8 "C1'" A G 3 ? ? "O4'" A G 3 ? ? "C4'" A G 3 ? ? 103.96 109.70 -5.74 0.70 N 322 8 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 110.43 101.50 8.93 0.80 N 323 8 N9 A G 3 ? ? "C1'" A G 3 ? ? "C2'" A G 3 ? ? 100.81 112.00 -11.19 1.10 N 324 8 "O4'" A G 3 ? ? "C1'" A G 3 ? ? N9 A G 3 ? ? 116.51 108.50 8.01 0.70 N 325 8 C5 A G 3 ? ? N7 A G 3 ? ? C8 A G 3 ? ? 100.29 104.30 -4.01 0.50 N 326 8 N7 A G 3 ? ? C8 A G 3 ? ? N9 A G 3 ? ? 118.55 113.10 5.45 0.50 N 327 8 "C3'" A G 3 ? ? "O3'" A G 3 ? ? P A U 4 ? ? 127.76 119.70 8.06 1.20 Y 328 8 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 116.42 108.50 7.92 0.70 N 329 8 "C3'" A U 4 ? ? "O3'" A U 4 ? ? P A G 5 ? ? 130.21 119.70 10.51 1.20 Y 330 8 "C2'" A G 5 ? ? "C3'" A G 5 ? ? "O3'" A G 5 ? ? 124.49 113.70 10.79 1.60 N 331 8 N9 A G 5 ? ? "C1'" A G 5 ? ? "C2'" A G 5 ? ? 101.97 112.00 -10.03 1.10 N 332 8 C5 A G 5 ? ? N7 A G 5 ? ? C8 A G 5 ? ? 99.90 104.30 -4.40 0.50 N 333 8 N7 A G 5 ? ? C8 A G 5 ? ? N9 A G 5 ? ? 118.36 113.10 5.26 0.50 N 334 8 "C3'" A G 5 ? ? "O3'" A G 5 ? ? P A 5MU 6 ? ? 129.84 119.70 10.14 1.20 Y 335 8 "C5'" A U 7 ? ? "C4'" A U 7 ? ? "O4'" A U 7 ? ? 120.45 109.80 10.65 0.90 N 336 8 "C4'" A U 7 ? ? "C3'" A U 7 ? ? "C2'" A U 7 ? ? 94.84 102.60 -7.76 1.00 N 337 8 "C3'" A C 8 ? ? "C2'" A C 8 ? ? "C1'" A C 8 ? ? 106.72 101.50 5.22 0.80 N 338 8 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 114.35 108.50 5.85 0.70 N 339 8 N7 A G 9 ? ? C8 A G 9 ? ? N9 A G 9 ? ? 116.64 113.10 3.54 0.50 N 340 8 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 114.33 108.50 5.83 0.70 N 341 8 "C1'" A U 11 ? ? "O4'" A U 11 ? ? "C4'" A U 11 ? ? 103.54 109.70 -6.16 0.70 N 342 8 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 115.55 108.50 7.05 0.70 N 343 8 "C5'" A C 13 ? ? "C4'" A C 13 ? ? "O4'" A C 13 ? ? 121.64 109.80 11.84 0.90 N 344 8 "C2'" A C 13 ? ? "C3'" A C 13 ? ? "O3'" A C 13 ? ? 124.44 113.70 10.74 1.60 N 345 8 N1 A C 13 ? ? "C1'" A C 13 ? ? "C2'" A C 13 ? ? 104.69 112.00 -7.31 1.10 N 346 8 "C5'" A A 14 ? ? "C4'" A A 14 ? ? "O4'" A A 14 ? ? 117.59 109.80 7.79 0.90 N 347 8 "C3'" A A 14 ? ? "C2'" A A 14 ? ? "C1'" A A 14 ? ? 107.19 101.50 5.69 0.80 N 348 8 N9 A A 14 ? ? "C1'" A A 14 ? ? "C2'" A A 14 ? ? 103.81 112.00 -8.19 1.10 N 349 8 C5 A A 14 ? ? N7 A A 14 ? ? C8 A A 14 ? ? 100.56 103.90 -3.34 0.50 N 350 8 N7 A A 14 ? ? C8 A A 14 ? ? N9 A A 14 ? ? 118.22 113.80 4.42 0.50 N 351 8 N1 A A 14 ? ? C6 A A 14 ? ? N6 A A 14 ? ? 122.69 118.60 4.09 0.60 N 352 8 "C3'" A C 15 ? ? "C2'" A C 15 ? ? "C1'" A C 15 ? ? 110.40 101.50 8.90 0.80 N 353 8 N1 A C 15 ? ? "C1'" A C 15 ? ? "C2'" A C 15 ? ? 104.78 112.00 -7.22 1.10 N 354 8 "O4'" A C 15 ? ? "C1'" A C 15 ? ? N1 A C 15 ? ? 114.81 108.50 6.31 0.70 N 355 8 N3 A C 15 ? ? C4 A C 15 ? ? N4 A C 15 ? ? 122.35 118.00 4.35 0.70 N 356 8 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 105.17 109.70 -4.53 0.70 N 357 8 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 108.27 101.50 6.77 0.80 N 358 8 "O4'" A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 99.07 105.80 -6.73 1.00 N 359 8 N9 A A 16 ? ? "C1'" A A 16 ? ? "C2'" A A 16 ? ? 103.71 112.00 -8.29 1.10 N 360 8 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 117.93 108.50 9.43 0.70 N 361 8 "C1'" A G 17 ? ? "O4'" A G 17 ? ? "C4'" A G 17 ? ? 104.11 109.70 -5.59 0.70 N 362 8 N9 A G 17 ? ? "C1'" A G 17 ? ? "C2'" A G 17 ? ? 94.23 112.00 -17.77 1.10 N 363 8 C5 A G 17 ? ? N7 A G 17 ? ? C8 A G 17 ? ? 100.18 104.30 -4.12 0.50 N 364 8 N7 A G 17 ? ? C8 A G 17 ? ? N9 A G 17 ? ? 116.52 113.10 3.42 0.50 N # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 3 _pdbx_validate_chiral.auth_atom_id "C2'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id C _pdbx_validate_chiral.auth_seq_id 8 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5MU 6 A 5MU 6 ? U ;5-METHYLURIDINE 5'-MONOPHOSPHATE ; 2 A CH 12 A CH 12 ? C ;N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE ; # _pdbx_nmr_ensemble.entry_id 1KOS _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 8 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST ENERGY STRUCTURES' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '100% D2O, 94% WATER/6% D2O' _pdbx_nmr_sample_details.solvent_system ? # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 DQF-COSY 1 3 1 TOCSY 1 4 1 HSQC 1 5 1 HETCOR 1 6 1 HETEROTOCSY 1 7 1 HETEROTOCSY-NOESY 1 8 1 DQ 1 # _pdbx_nmr_details.entry_id 1KOS _pdbx_nmr_details.text 'EXPERIMENTS IN 100% D2O CONDUCTED AT 283, 288,293, AND 298 KELVIN; EXPERIMENTS IN 6% D2O/ 94% H2O CONDUCTED AT 274 AND 283 KELVIN.' # _pdbx_nmr_refine.entry_id 1KOS _pdbx_nmr_refine.method 'DISTANCE GEOMETRY AND SIMULATED ANNEALING' _pdbx_nmr_refine.details 'REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.851 BRUNGER 1 'structure solution' X-PLOR ? ? 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5MU N1 N N N 1 5MU C2 C N N 2 5MU N3 N N N 3 5MU C4 C N N 4 5MU C5 C N N 5 5MU C5M C N N 6 5MU C6 C N N 7 5MU O2 O N N 8 5MU O4 O N N 9 5MU "C1'" C N R 10 5MU "C2'" C N R 11 5MU "O2'" O N N 12 5MU "C3'" C N S 13 5MU "C4'" C N R 14 5MU "O3'" O N N 15 5MU "O4'" O N N 16 5MU "C5'" C N N 17 5MU "O5'" O N N 18 5MU P P N N 19 5MU OP1 O N N 20 5MU OP2 O N N 21 5MU OP3 O N N 22 5MU HN3 H N N 23 5MU H71 H N N 24 5MU H72 H N N 25 5MU H73 H N N 26 5MU H6 H N N 27 5MU "H1'" H N N 28 5MU "H2'" H N N 29 5MU "HO2'" H N N 30 5MU "H3'" H N N 31 5MU "H4'" H N N 32 5MU "HO3'" H N N 33 5MU "H5'" H N N 34 5MU "H5''" H N N 35 5MU HOP2 H N N 36 5MU HOP3 H N N 37 A OP3 O N N 38 A P P N N 39 A OP1 O N N 40 A OP2 O N N 41 A "O5'" O N N 42 A "C5'" C N N 43 A "C4'" C N R 44 A "O4'" O N N 45 A "C3'" C N S 46 A "O3'" O N N 47 A "C2'" C N R 48 A "O2'" O N N 49 A "C1'" C N R 50 A N9 N Y N 51 A C8 C Y N 52 A N7 N Y N 53 A C5 C Y N 54 A C6 C Y N 55 A N6 N N N 56 A N1 N Y N 57 A C2 C Y N 58 A N3 N Y N 59 A C4 C Y N 60 A HOP3 H N N 61 A HOP2 H N N 62 A "H5'" H N N 63 A "H5''" H N N 64 A "H4'" H N N 65 A "H3'" H N N 66 A "HO3'" H N N 67 A "H2'" H N N 68 A "HO2'" H N N 69 A "H1'" H N N 70 A H8 H N N 71 A H61 H N N 72 A H62 H N N 73 A H2 H N N 74 C OP3 O N N 75 C P P N N 76 C OP1 O N N 77 C OP2 O N N 78 C "O5'" O N N 79 C "C5'" C N N 80 C "C4'" C N R 81 C "O4'" O N N 82 C "C3'" C N S 83 C "O3'" O N N 84 C "C2'" C N R 85 C "O2'" O N N 86 C "C1'" C N R 87 C N1 N N N 88 C C2 C N N 89 C O2 O N N 90 C N3 N N N 91 C C4 C N N 92 C N4 N N N 93 C C5 C N N 94 C C6 C N N 95 C HOP3 H N N 96 C HOP2 H N N 97 C "H5'" H N N 98 C "H5''" H N N 99 C "H4'" H N N 100 C "H3'" H N N 101 C "HO3'" H N N 102 C "H2'" H N N 103 C "HO2'" H N N 104 C "H1'" H N N 105 C H41 H N N 106 C H42 H N N 107 C H5 H N N 108 C H6 H N N 109 CH OP3 O N N 110 CH P P N N 111 CH OP1 O N N 112 CH OP2 O N N 113 CH "O5'" O N N 114 CH "C5'" C N N 115 CH "C4'" C N R 116 CH "O4'" O N N 117 CH "C3'" C N S 118 CH "O3'" O N N 119 CH "C2'" C N R 120 CH "O2'" O N N 121 CH "C1'" C N R 122 CH N1 N N N 123 CH C2 C N N 124 CH O2 O N N 125 CH N3 N N N 126 CH C4 C N N 127 CH N4 N N N 128 CH C5 C N N 129 CH C6 C N N 130 CH HOP3 H N N 131 CH HOP2 H N N 132 CH "H5'" H N N 133 CH "H5''" H N N 134 CH "H4'" H N N 135 CH "H3'" H N N 136 CH "HO3'" H N N 137 CH "H2'" H N N 138 CH "HO2'" H N N 139 CH "H1'" H N N 140 CH HN3 H N N 141 CH H41 H N N 142 CH H42 H N N 143 CH H5 H N N 144 CH H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 U OP3 O N N 184 U P P N N 185 U OP1 O N N 186 U OP2 O N N 187 U "O5'" O N N 188 U "C5'" C N N 189 U "C4'" C N R 190 U "O4'" O N N 191 U "C3'" C N S 192 U "O3'" O N N 193 U "C2'" C N R 194 U "O2'" O N N 195 U "C1'" C N R 196 U N1 N N N 197 U C2 C N N 198 U O2 O N N 199 U N3 N N N 200 U C4 C N N 201 U O4 O N N 202 U C5 C N N 203 U C6 C N N 204 U HOP3 H N N 205 U HOP2 H N N 206 U "H5'" H N N 207 U "H5''" H N N 208 U "H4'" H N N 209 U "H3'" H N N 210 U "HO3'" H N N 211 U "H2'" H N N 212 U "HO2'" H N N 213 U "H1'" H N N 214 U H3 H N N 215 U H5 H N N 216 U H6 H N N 217 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5MU N1 C2 sing N N 1 5MU N1 C6 sing N N 2 5MU N1 "C1'" sing N N 3 5MU C2 N3 sing N N 4 5MU C2 O2 doub N N 5 5MU N3 C4 sing N N 6 5MU N3 HN3 sing N N 7 5MU C4 C5 sing N N 8 5MU C4 O4 doub N N 9 5MU C5 C5M sing N N 10 5MU C5 C6 doub N N 11 5MU C5M H71 sing N N 12 5MU C5M H72 sing N N 13 5MU C5M H73 sing N N 14 5MU C6 H6 sing N N 15 5MU "C1'" "C2'" sing N N 16 5MU "C1'" "O4'" sing N N 17 5MU "C1'" "H1'" sing N N 18 5MU "C2'" "O2'" sing N N 19 5MU "C2'" "C3'" sing N N 20 5MU "C2'" "H2'" sing N N 21 5MU "O2'" "HO2'" sing N N 22 5MU "C3'" "C4'" sing N N 23 5MU "C3'" "O3'" sing N N 24 5MU "C3'" "H3'" sing N N 25 5MU "C4'" "O4'" sing N N 26 5MU "C4'" "C5'" sing N N 27 5MU "C4'" "H4'" sing N N 28 5MU "O3'" "HO3'" sing N N 29 5MU "C5'" "O5'" sing N N 30 5MU "C5'" "H5'" sing N N 31 5MU "C5'" "H5''" sing N N 32 5MU "O5'" P sing N N 33 5MU P OP1 doub N N 34 5MU P OP2 sing N N 35 5MU P OP3 sing N N 36 5MU OP2 HOP2 sing N N 37 5MU OP3 HOP3 sing N N 38 A OP3 P sing N N 39 A OP3 HOP3 sing N N 40 A P OP1 doub N N 41 A P OP2 sing N N 42 A P "O5'" sing N N 43 A OP2 HOP2 sing N N 44 A "O5'" "C5'" sing N N 45 A "C5'" "C4'" sing N N 46 A "C5'" "H5'" sing N N 47 A "C5'" "H5''" sing N N 48 A "C4'" "O4'" sing N N 49 A "C4'" "C3'" sing N N 50 A "C4'" "H4'" sing N N 51 A "O4'" "C1'" sing N N 52 A "C3'" "O3'" sing N N 53 A "C3'" "C2'" sing N N 54 A "C3'" "H3'" sing N N 55 A "O3'" "HO3'" sing N N 56 A "C2'" "O2'" sing N N 57 A "C2'" "C1'" sing N N 58 A "C2'" "H2'" sing N N 59 A "O2'" "HO2'" sing N N 60 A "C1'" N9 sing N N 61 A "C1'" "H1'" sing N N 62 A N9 C8 sing Y N 63 A N9 C4 sing Y N 64 A C8 N7 doub Y N 65 A C8 H8 sing N N 66 A N7 C5 sing Y N 67 A C5 C6 sing Y N 68 A C5 C4 doub Y N 69 A C6 N6 sing N N 70 A C6 N1 doub Y N 71 A N6 H61 sing N N 72 A N6 H62 sing N N 73 A N1 C2 sing Y N 74 A C2 N3 doub Y N 75 A C2 H2 sing N N 76 A N3 C4 sing Y N 77 C OP3 P sing N N 78 C OP3 HOP3 sing N N 79 C P OP1 doub N N 80 C P OP2 sing N N 81 C P "O5'" sing N N 82 C OP2 HOP2 sing N N 83 C "O5'" "C5'" sing N N 84 C "C5'" "C4'" sing N N 85 C "C5'" "H5'" sing N N 86 C "C5'" "H5''" sing N N 87 C "C4'" "O4'" sing N N 88 C "C4'" "C3'" sing N N 89 C "C4'" "H4'" sing N N 90 C "O4'" "C1'" sing N N 91 C "C3'" "O3'" sing N N 92 C "C3'" "C2'" sing N N 93 C "C3'" "H3'" sing N N 94 C "O3'" "HO3'" sing N N 95 C "C2'" "O2'" sing N N 96 C "C2'" "C1'" sing N N 97 C "C2'" "H2'" sing N N 98 C "O2'" "HO2'" sing N N 99 C "C1'" N1 sing N N 100 C "C1'" "H1'" sing N N 101 C N1 C2 sing N N 102 C N1 C6 sing N N 103 C C2 O2 doub N N 104 C C2 N3 sing N N 105 C N3 C4 doub N N 106 C C4 N4 sing N N 107 C C4 C5 sing N N 108 C N4 H41 sing N N 109 C N4 H42 sing N N 110 C C5 C6 doub N N 111 C C5 H5 sing N N 112 C C6 H6 sing N N 113 CH OP3 P sing N N 114 CH OP3 HOP3 sing N N 115 CH P OP1 doub N N 116 CH P OP2 sing N N 117 CH P "O5'" sing N N 118 CH OP2 HOP2 sing N N 119 CH "O5'" "C5'" sing N N 120 CH "C5'" "C4'" sing N N 121 CH "C5'" "H5'" sing N N 122 CH "C5'" "H5''" sing N N 123 CH "C4'" "O4'" sing N N 124 CH "C4'" "C3'" sing N N 125 CH "C4'" "H4'" sing N N 126 CH "O4'" "C1'" sing N N 127 CH "C3'" "O3'" sing N N 128 CH "C3'" "C2'" sing N N 129 CH "C3'" "H3'" sing N N 130 CH "O3'" "HO3'" sing N N 131 CH "C2'" "O2'" sing N N 132 CH "C2'" "C1'" sing N N 133 CH "C2'" "H2'" sing N N 134 CH "O2'" "HO2'" sing N N 135 CH "C1'" N1 sing N N 136 CH "C1'" "H1'" sing N N 137 CH N1 C2 sing N N 138 CH N1 C6 doub N N 139 CH C2 O2 doub N N 140 CH C2 N3 sing N N 141 CH N3 C4 sing N N 142 CH N3 HN3 sing N N 143 CH C4 N4 sing N N 144 CH C4 C5 doub N N 145 CH N4 H41 sing N N 146 CH N4 H42 sing N N 147 CH C5 C6 sing N N 148 CH C5 H5 sing N N 149 CH C6 H6 sing N N 150 G OP3 P sing N N 151 G OP3 HOP3 sing N N 152 G P OP1 doub N N 153 G P OP2 sing N N 154 G P "O5'" sing N N 155 G OP2 HOP2 sing N N 156 G "O5'" "C5'" sing N N 157 G "C5'" "C4'" sing N N 158 G "C5'" "H5'" sing N N 159 G "C5'" "H5''" sing N N 160 G "C4'" "O4'" sing N N 161 G "C4'" "C3'" sing N N 162 G "C4'" "H4'" sing N N 163 G "O4'" "C1'" sing N N 164 G "C3'" "O3'" sing N N 165 G "C3'" "C2'" sing N N 166 G "C3'" "H3'" sing N N 167 G "O3'" "HO3'" sing N N 168 G "C2'" "O2'" sing N N 169 G "C2'" "C1'" sing N N 170 G "C2'" "H2'" sing N N 171 G "O2'" "HO2'" sing N N 172 G "C1'" N9 sing N N 173 G "C1'" "H1'" sing N N 174 G N9 C8 sing Y N 175 G N9 C4 sing Y N 176 G C8 N7 doub Y N 177 G C8 H8 sing N N 178 G N7 C5 sing Y N 179 G C5 C6 sing N N 180 G C5 C4 doub Y N 181 G C6 O6 doub N N 182 G C6 N1 sing N N 183 G N1 C2 sing N N 184 G N1 H1 sing N N 185 G C2 N2 sing N N 186 G C2 N3 doub N N 187 G N2 H21 sing N N 188 G N2 H22 sing N N 189 G N3 C4 sing N N 190 U OP3 P sing N N 191 U OP3 HOP3 sing N N 192 U P OP1 doub N N 193 U P OP2 sing N N 194 U P "O5'" sing N N 195 U OP2 HOP2 sing N N 196 U "O5'" "C5'" sing N N 197 U "C5'" "C4'" sing N N 198 U "C5'" "H5'" sing N N 199 U "C5'" "H5''" sing N N 200 U "C4'" "O4'" sing N N 201 U "C4'" "C3'" sing N N 202 U "C4'" "H4'" sing N N 203 U "O4'" "C1'" sing N N 204 U "C3'" "O3'" sing N N 205 U "C3'" "C2'" sing N N 206 U "C3'" "H3'" sing N N 207 U "O3'" "HO3'" sing N N 208 U "C2'" "O2'" sing N N 209 U "C2'" "C1'" sing N N 210 U "C2'" "H2'" sing N N 211 U "O2'" "HO2'" sing N N 212 U "C1'" N1 sing N N 213 U "C1'" "H1'" sing N N 214 U N1 C2 sing N N 215 U N1 C6 sing N N 216 U C2 O2 doub N N 217 U C2 N3 sing N N 218 U N3 C4 sing N N 219 U N3 H3 sing N N 220 U C4 O4 doub N N 221 U C4 C5 sing N N 222 U C5 C6 doub N N 223 U C5 H5 sing N N 224 U C6 H6 sing N N 225 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1KOS 'double helix' 1KOS 'b-form double helix' 1KOS 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 A G 17 1_555 -0.830 -1.016 -1.826 15.586 -3.804 -5.280 1 A_C1:G17_A A 1 ? A 17 ? 19 1 1 A U 2 1_555 A A 16 1_555 0.110 -0.289 -0.081 4.621 -4.443 -8.627 2 A_U2:A16_A A 2 ? A 16 ? 20 1 1 A G 3 1_555 A C 15 1_555 0.795 -0.354 -0.349 -7.816 -22.945 4.010 3 A_G3:C15_A A 3 ? A 15 ? 19 1 1 A U 4 1_555 A A 14 1_555 0.645 -0.356 0.008 -2.906 -9.380 -9.928 4 A_U4:A14_A A 4 ? A 14 ? 20 1 1 A G 5 1_555 A C 13 1_555 0.658 -0.189 0.015 -7.884 -14.092 2.490 5 A_G5:C13_A A 5 ? A 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 A G 17 1_555 A U 2 1_555 A A 16 1_555 -0.583 -0.676 4.090 -9.010 17.021 33.605 -3.618 -0.493 3.421 26.876 14.226 38.593 1 AA_C1U2:A16G17_AA A 1 ? A 17 ? A 2 ? A 16 ? 1 A U 2 1_555 A A 16 1_555 A G 3 1_555 A C 15 1_555 -0.485 -0.652 3.195 -1.251 21.296 29.596 -3.799 0.615 2.259 36.343 2.136 36.343 2 AA_U2G3:C15A16_AA A 2 ? A 16 ? A 3 ? A 15 ? 1 A G 3 1_555 A C 15 1_555 A U 4 1_555 A A 14 1_555 -0.427 -0.344 2.771 -0.124 11.448 28.624 -2.505 0.785 2.457 22.072 0.238 30.785 3 AA_G3U4:A14C15_AA A 3 ? A 15 ? A 4 ? A 14 ? 1 A U 4 1_555 A A 14 1_555 A G 5 1_555 A C 13 1_555 1.901 -0.625 3.774 6.640 -26.627 45.454 1.479 -1.597 3.810 -31.333 -7.813 52.717 4 AA_U4G5:C13A14_AA A 4 ? A 14 ? A 5 ? A 13 ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DRX500 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 1KOS _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_