data_1KQE # _entry.id 1KQE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KQE pdb_00001kqe 10.2210/pdb1kqe/pdb RCSB RCSB015229 ? ? WWPDB D_1000015229 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1TK2 unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN S COMPLEXED WITH ALKALINE PROTEINASE SAVINASE' PDB 2XDC unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A FROM CRYSTALS GROWN IN A LIPID CUBIC PHASE.' PDB 1AV2 unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLEXED WITH CESIUM CHLORIDE' PDB 1BDW unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A FROM BACILLUS BREVIS' PDB 1C4D unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLEXED WITH CESIUM CHLORIDE' PDB 1GMK unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLRXED WITH POTASSIUM THIOCYANATE' PDB 1GRM unspecified 'SOLUTION STRUCTURE OF THE GRAMICIDIN A' PDB 1JNO unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN SODIUM DODECYL SULFATE MICELLES' PDB 1MAG unspecified 'SOLID STATE NMR STRUCTURE OF GRAMICIDIN A IN HYDRATED DMPC BILAYERS,' PDB 1MIC unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN METHANOL IN THE PRESENCE OF CACL' PDB 1NG8 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A (W15G) IN SODIUM DODECYL SULFATE MICELLES' PDB 1NRM unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN DODECYL PHOSPHOCHOLINE MICELLES' PDB 1NRU unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN DODECYL PHOSPHOCHOLINE MICELLES IN THE PRESENCE OF EXCESS NA+' PDB 1NT5 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A (V1F) IN SODIUM DODECYL SULFATE MICELLES' PDB 1JO3 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN B IN SODIUM DODECYL SULFATE MICELLES' PDB 1JO4 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN C IN SODIUM DODECYL SULFATE MICELLES' PDB 1NT6 unspecified 'SOLUTION STRUCTURE OF F1-GRAMICIDIN C IN SODIUM DODECYL SULFATE MICELLES' PDB 1TKQ unspecified 'SOLUTION STRUCTURE OF A LINKED UNSYMMETRIC GRAMICIDIN A IN A MEMBRANE-ISOELECTRICAL SOLVENTS MIXTURE, IN THE PRESENCE OF CSCL' PDB 1W5U unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN ETHANOL' PDB 2IZQ unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D COMPLEX WITH KI IN METHANOL' PDB 3L8L unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D COMPLEX WITH NAI' PDB 1AL4 unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN N-PROPANOL' PDB 1ALX unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN METHANOL' PDB 1ALZ unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN ETHANOL' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KQE _pdbx_database_status.recvd_initial_deposition_date 2002-01-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arndt, H.D.' 1 'Bockelmann, D.' 2 'Knoll, A.' 3 'Lamberth, S.' 4 'Griesinger, C.' 5 'Koert, U.' 6 # _citation.id primary _citation.title 'Cation Control in Functional Helical Programming: Structures of a D,L-Peptide Ion Channel' _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_volume 41 _citation.page_first 4062 _citation.page_last ? _citation.year 2002 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1433-7851 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12412082 _citation.pdbx_database_id_DOI '10.1002/1521-3773(20021104)41:21<4062::AID-ANIE4062>3.0.CO;2-U' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arndt, H.D.' 1 ? primary 'Bockelmann, D.' 2 ? primary 'Knoll, A.' 3 ? primary 'Lamberth, S.' 4 ? primary 'Griesinger, C.' 5 ? primary 'Koert, U.' 6 ? # _cell.entry_id 1KQE _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KQE _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'MINI-GRAMICIDIN A' 1613.939 2 ? ? ? 'GRAMICIDIN A RESIDUES 5-16' 2 polymer syn 'MINI-GRAMICIDIN A' 1513.866 2 ? ? ? 'GRAMICIDIN A RESIDUES 5-16' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(X5P)(DVA)V(DVA)W(DLE)W(DLE)W(DLE)W(ETA)' AVVVWLWLWLWX A,D ? 2 'polypeptide(L)' no yes 'A(DVA)V(DVA)W(DLE)W(DLE)W(DLE)W(ETA)' AVVVWLWLWLWX B,E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 X5P n 1 2 DVA n 1 3 VAL n 1 4 DVA n 1 5 TRP n 1 6 DLE n 1 7 TRP n 1 8 DLE n 1 9 TRP n 1 10 DLE n 1 11 TRP n 1 12 ETA n 2 1 ALA n 2 2 DVA n 2 3 VAL n 2 4 DVA n 2 5 TRP n 2 6 DLE n 2 7 TRP n 2 8 DLE n 2 9 TRP n 2 10 DLE n 2 11 TRP n 2 12 ETA n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 12 'Brevibacillus brevis' ? 1393 ? 2 1 sample 1 12 'Brevibacillus brevis' ? 1393 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 1KQE 1KQE ? 1 ? 1 2 PDB 1KQE 1KQE ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1KQE A 1 ? 12 ? 1KQE 5 ? 16 ? 5 16 2 2 1KQE B 1 ? 12 ? 1KQE 5 ? 16 ? 5 16 3 1 1KQE D 1 ? 12 ? 1KQE 5 ? 16 ? 5 16 4 2 1KQE E 1 ? 12 ? 1KQE 5 ? 16 ? 5 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DVA 'D-peptide linking' . D-VALINE ? 'C5 H11 N O2' 117.146 ETA 'L-peptide COOH carboxy terminus' . ETHANOLAMINE ? 'C2 H7 N O' 61.083 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 X5P 'L-peptide NH3 amino terminus' n '4-oxidanylidene-4-[[(2~{S})-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]butanoic acid' ? 'C7 H11 N O5' 189.166 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 DQF-COSY 1 2 1 '2D NOESY' 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH ? _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AMX _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1KQE _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1KQE _pdbx_nmr_details.text ;MINIMIZED AVERAGE STRUCTURE CALCULATED FROM THE SIXTEEN ENERGETICALLY FAVOURED STRUCTURES OUT OF THE TOTAL 200 CALCULATED STRUCTURES ; # _pdbx_nmr_ensemble.entry_id 1KQE _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1KQE _pdbx_nmr_representative.conformer_id ? _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR ? BRUNGER 1 'structure solution' X-PLOR ? ? 2 # _exptl.entry_id 1KQE _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1KQE _struct.title 'Solution structure of a linked shortened gramicidin A in benzene/acetone 10:1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KQE _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'GRAMICIDIN, ANTIFUNGAL, ANTIBACTERIAL, ANTIBIOTIC, MEMBRANE ION CHANNEL, LINEAR GRAMICIDIN, METAL TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A X5P 1 C1 ? ? ? 1_555 B ALA 1 N ? ? A X5P 5 B ALA 5 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale both ? A DVA 2 C ? ? ? 1_555 A VAL 3 N ? ? A DVA 6 A VAL 7 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A VAL 3 C ? ? ? 1_555 A DVA 4 N ? ? A VAL 7 A DVA 8 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A DVA 4 C ? ? ? 1_555 A TRP 5 N ? ? A DVA 8 A TRP 9 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale5 covale both ? A TRP 5 C ? ? ? 1_555 A DLE 6 N ? ? A TRP 9 A DLE 10 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale6 covale both ? A DLE 6 C ? ? ? 1_555 A TRP 7 N ? ? A DLE 10 A TRP 11 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale7 covale both ? A TRP 7 C ? ? ? 1_555 A DLE 8 N ? ? A TRP 11 A DLE 12 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? A DLE 8 C ? ? ? 1_555 A TRP 9 N ? ? A DLE 12 A TRP 13 1_555 ? ? ? ? ? ? ? 1.309 ? ? covale9 covale both ? A TRP 9 C ? ? ? 1_555 A DLE 10 N ? ? A TRP 13 A DLE 14 1_555 ? ? ? ? ? ? ? 1.306 ? ? covale10 covale both ? A DLE 10 C ? ? ? 1_555 A TRP 11 N ? ? A DLE 14 A TRP 15 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale11 covale both ? A TRP 11 C ? ? ? 1_555 A ETA 12 N ? ? A TRP 15 A ETA 16 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale12 covale both ? B ALA 1 C ? ? ? 1_555 B DVA 2 N ? ? B ALA 5 B DVA 6 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? B DVA 2 C ? ? ? 1_555 B VAL 3 N ? ? B DVA 6 B VAL 7 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale14 covale both ? B VAL 3 C ? ? ? 1_555 B DVA 4 N ? ? B VAL 7 B DVA 8 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale15 covale both ? B DVA 4 C ? ? ? 1_555 B TRP 5 N ? ? B DVA 8 B TRP 9 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale16 covale both ? B TRP 5 C ? ? ? 1_555 B DLE 6 N ? ? B TRP 9 B DLE 10 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale17 covale both ? B DLE 6 C ? ? ? 1_555 B TRP 7 N ? ? B DLE 10 B TRP 11 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale18 covale both ? B TRP 7 C ? ? ? 1_555 B DLE 8 N ? ? B TRP 11 B DLE 12 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale19 covale both ? B DLE 8 C ? ? ? 1_555 B TRP 9 N ? ? B DLE 12 B TRP 13 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale20 covale both ? B TRP 9 C ? ? ? 1_555 B DLE 10 N ? ? B TRP 13 B DLE 14 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale21 covale both ? B DLE 10 C ? ? ? 1_555 B TRP 11 N ? ? B DLE 14 B TRP 15 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale22 covale both ? B TRP 11 C ? ? ? 1_555 B ETA 12 N ? ? B TRP 15 B ETA 16 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale23 covale both ? C X5P 1 C1 ? ? ? 1_555 D ALA 1 N ? ? D X5P 5 E ALA 5 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale24 covale both ? C DVA 2 C ? ? ? 1_555 C VAL 3 N ? ? D DVA 6 D VAL 7 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale25 covale both ? C VAL 3 C ? ? ? 1_555 C DVA 4 N ? ? D VAL 7 D DVA 8 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale26 covale both ? C DVA 4 C ? ? ? 1_555 C TRP 5 N ? ? D DVA 8 D TRP 9 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale27 covale both ? C TRP 5 C ? ? ? 1_555 C DLE 6 N ? ? D TRP 9 D DLE 10 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale28 covale both ? C DLE 6 C ? ? ? 1_555 C TRP 7 N ? ? D DLE 10 D TRP 11 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale29 covale both ? C TRP 7 C ? ? ? 1_555 C DLE 8 N ? ? D TRP 11 D DLE 12 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale30 covale both ? C DLE 8 C ? ? ? 1_555 C TRP 9 N ? ? D DLE 12 D TRP 13 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale31 covale both ? C TRP 9 C ? ? ? 1_555 C DLE 10 N ? ? D TRP 13 D DLE 14 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale32 covale both ? C DLE 10 C ? ? ? 1_555 C TRP 11 N ? ? D DLE 14 D TRP 15 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale33 covale both ? C TRP 11 C ? ? ? 1_555 C ETA 12 N ? ? D TRP 15 D ETA 16 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale34 covale both ? D ALA 1 C ? ? ? 1_555 D DVA 2 N ? ? E ALA 5 E DVA 6 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale35 covale both ? D DVA 2 C ? ? ? 1_555 D VAL 3 N ? ? E DVA 6 E VAL 7 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale36 covale both ? D VAL 3 C ? ? ? 1_555 D DVA 4 N ? ? E VAL 7 E DVA 8 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale37 covale both ? D DVA 4 C ? ? ? 1_555 D TRP 5 N ? ? E DVA 8 E TRP 9 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale38 covale both ? D TRP 5 C ? ? ? 1_555 D DLE 6 N ? ? E TRP 9 E DLE 10 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale39 covale both ? D DLE 6 C ? ? ? 1_555 D TRP 7 N ? ? E DLE 10 E TRP 11 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale40 covale both ? D TRP 7 C ? ? ? 1_555 D DLE 8 N ? ? E TRP 11 E DLE 12 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale41 covale both ? D DLE 8 C ? ? ? 1_555 D TRP 9 N ? ? E DLE 12 E TRP 13 1_555 ? ? ? ? ? ? ? 1.312 ? ? covale42 covale both ? D TRP 9 C ? ? ? 1_555 D DLE 10 N ? ? E TRP 13 E DLE 14 1_555 ? ? ? ? ? ? ? 1.305 ? ? covale43 covale both ? D DLE 10 C ? ? ? 1_555 D TRP 11 N ? ? E DLE 14 E TRP 15 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale44 covale both ? D TRP 11 C ? ? ? 1_555 D ETA 12 N ? ? E TRP 15 E ETA 16 1_555 ? ? ? ? ? ? ? 1.339 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? BA ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel BA 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 DVA A 2 ? DLE A 10 ? DVA A 6 DLE A 14 AA 2 DVA D 2 ? DLE D 10 ? DVA E 6 DLE E 14 BA 1 DVA B 2 ? DLE B 10 ? DVA B 6 DLE B 14 BA 2 DVA C 2 ? DLE C 10 ? DVA D 6 DLE D 14 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 O DVA A 4 ? O DVA A 8 N VAL D 3 ? N VAL E 7 BA 1 2 O DVA B 4 ? O DVA B 8 N VAL C 3 ? N VAL D 7 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 23 'BINDING SITE FOR CHAINS A AND B OF A LINKED GRAMICIDIN' AC2 Software ? ? ? ? 23 'BINDING SITE FOR CHAINS D AND E OF A LINKED GRAMICIDIN' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 DVA C 2 ? DVA D 6 . ? 1_555 ? 2 AC1 23 VAL C 3 ? VAL D 7 . ? 1_555 ? 3 AC1 23 DVA C 4 ? DVA D 8 . ? 1_555 ? 4 AC1 23 TRP C 5 ? TRP D 9 . ? 1_555 ? 5 AC1 23 DLE C 6 ? DLE D 10 . ? 1_555 ? 6 AC1 23 TRP C 7 ? TRP D 11 . ? 1_555 ? 7 AC1 23 DLE C 8 ? DLE D 12 . ? 1_555 ? 8 AC1 23 TRP C 9 ? TRP D 13 . ? 1_555 ? 9 AC1 23 DLE C 10 ? DLE D 14 . ? 1_555 ? 10 AC1 23 TRP C 11 ? TRP D 15 . ? 1_555 ? 11 AC1 23 ETA C 12 ? ETA D 16 . ? 1_555 ? 12 AC1 23 ALA D 1 ? ALA E 5 . ? 1_555 ? 13 AC1 23 DVA D 2 ? DVA E 6 . ? 1_555 ? 14 AC1 23 VAL D 3 ? VAL E 7 . ? 1_555 ? 15 AC1 23 DVA D 4 ? DVA E 8 . ? 1_555 ? 16 AC1 23 TRP D 5 ? TRP E 9 . ? 1_555 ? 17 AC1 23 DLE D 6 ? DLE E 10 . ? 1_555 ? 18 AC1 23 TRP D 7 ? TRP E 11 . ? 1_555 ? 19 AC1 23 DLE D 8 ? DLE E 12 . ? 1_555 ? 20 AC1 23 TRP D 9 ? TRP E 13 . ? 1_555 ? 21 AC1 23 DLE D 10 ? DLE E 14 . ? 1_555 ? 22 AC1 23 TRP D 11 ? TRP E 15 . ? 1_555 ? 23 AC1 23 ETA D 12 ? ETA E 16 . ? 1_555 ? 24 AC2 23 DVA A 2 ? DVA A 6 . ? 1_555 ? 25 AC2 23 VAL A 3 ? VAL A 7 . ? 1_555 ? 26 AC2 23 DVA A 4 ? DVA A 8 . ? 1_555 ? 27 AC2 23 TRP A 5 ? TRP A 9 . ? 1_555 ? 28 AC2 23 DLE A 6 ? DLE A 10 . ? 1_555 ? 29 AC2 23 TRP A 7 ? TRP A 11 . ? 1_555 ? 30 AC2 23 DLE A 8 ? DLE A 12 . ? 1_555 ? 31 AC2 23 TRP A 9 ? TRP A 13 . ? 1_555 ? 32 AC2 23 DLE A 10 ? DLE A 14 . ? 1_555 ? 33 AC2 23 TRP A 11 ? TRP A 15 . ? 1_555 ? 34 AC2 23 ETA A 12 ? ETA A 16 . ? 1_555 ? 35 AC2 23 ALA B 1 ? ALA B 5 . ? 1_555 ? 36 AC2 23 DVA B 2 ? DVA B 6 . ? 1_555 ? 37 AC2 23 VAL B 3 ? VAL B 7 . ? 1_555 ? 38 AC2 23 DVA B 4 ? DVA B 8 . ? 1_555 ? 39 AC2 23 TRP B 5 ? TRP B 9 . ? 1_555 ? 40 AC2 23 DLE B 6 ? DLE B 10 . ? 1_555 ? 41 AC2 23 TRP B 7 ? TRP B 11 . ? 1_555 ? 42 AC2 23 DLE B 8 ? DLE B 12 . ? 1_555 ? 43 AC2 23 TRP B 9 ? TRP B 13 . ? 1_555 ? 44 AC2 23 DLE B 10 ? DLE B 14 . ? 1_555 ? 45 AC2 23 TRP B 11 ? TRP B 15 . ? 1_555 ? 46 AC2 23 ETA B 12 ? ETA B 16 . ? 1_555 ? # _database_PDB_matrix.entry_id 1KQE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KQE _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 X5P 1 5 5 X5P XXX A . n A 1 2 DVA 2 6 6 DVA DVA A . n A 1 3 VAL 3 7 7 VAL VAL A . n A 1 4 DVA 4 8 8 DVA DVA A . n A 1 5 TRP 5 9 9 TRP TRP A . n A 1 6 DLE 6 10 10 DLE DLE A . n A 1 7 TRP 7 11 11 TRP TRP A . n A 1 8 DLE 8 12 12 DLE DLE A . n A 1 9 TRP 9 13 13 TRP TRP A . n A 1 10 DLE 10 14 14 DLE DLE A . n A 1 11 TRP 11 15 15 TRP TRP A . n A 1 12 ETA 12 16 16 ETA ETA A . n B 2 1 ALA 1 5 5 ALA ALA B . n B 2 2 DVA 2 6 6 DVA DVA B . n B 2 3 VAL 3 7 7 VAL VAL B . n B 2 4 DVA 4 8 8 DVA DVA B . n B 2 5 TRP 5 9 9 TRP TRP B . n B 2 6 DLE 6 10 10 DLE DLE B . n B 2 7 TRP 7 11 11 TRP TRP B . n B 2 8 DLE 8 12 12 DLE DLE B . n B 2 9 TRP 9 13 13 TRP TRP B . n B 2 10 DLE 10 14 14 DLE DLE B . n B 2 11 TRP 11 15 15 TRP TRP B . n B 2 12 ETA 12 16 16 ETA ETA B . n C 1 1 X5P 1 5 5 X5P XXX D . n C 1 2 DVA 2 6 6 DVA DVA D . n C 1 3 VAL 3 7 7 VAL VAL D . n C 1 4 DVA 4 8 8 DVA DVA D . n C 1 5 TRP 5 9 9 TRP TRP D . n C 1 6 DLE 6 10 10 DLE DLE D . n C 1 7 TRP 7 11 11 TRP TRP D . n C 1 8 DLE 8 12 12 DLE DLE D . n C 1 9 TRP 9 13 13 TRP TRP D . n C 1 10 DLE 10 14 14 DLE DLE D . n C 1 11 TRP 11 15 15 TRP TRP D . n C 1 12 ETA 12 16 16 ETA ETA D . n D 2 1 ALA 1 5 5 ALA ALA E . n D 2 2 DVA 2 6 6 DVA DVA E . n D 2 3 VAL 3 7 7 VAL VAL E . n D 2 4 DVA 4 8 8 DVA DVA E . n D 2 5 TRP 5 9 9 TRP TRP E . n D 2 6 DLE 6 10 10 DLE DLE E . n D 2 7 TRP 7 11 11 TRP TRP E . n D 2 8 DLE 8 12 12 DLE DLE E . n D 2 9 TRP 9 13 13 TRP TRP E . n D 2 10 DLE 10 14 14 DLE DLE E . n D 2 11 TRP 11 15 15 TRP TRP E . n D 2 12 ETA 12 16 16 ETA ETA E . n # _pdbx_molecule_features.prd_id PRD_000154 _pdbx_molecule_features.name 'MINI-GRAMICIDIN A DIMER' _pdbx_molecule_features.type Polypeptide _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details 'THE N-TERMINI OF THE TWO IDENTICAL PEPTIDES, EACH A TRUNCATED GRAMICIDIN A WERE LINKED BY A SUCCINIC ACID IN A HEAD-TO-HEAD MANNER.' # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000154 A 1 PRD_000154 B 2 PRD_000154 C 2 PRD_000154 D # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-11-27 2 'Structure model' 1 1 2011-06-14 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-27 5 'Structure model' 1 4 2011-08-10 6 'Structure model' 1 5 2012-12-12 7 'Structure model' 1 6 2013-03-06 8 'Structure model' 1 7 2013-03-27 9 'Structure model' 1 8 2013-04-10 10 'Structure model' 1 9 2018-07-18 11 'Structure model' 2 0 2023-06-14 12 'Structure model' 3 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' Advisory 9 6 'Structure model' Other 10 7 'Structure model' 'Structure summary' 11 8 'Structure model' 'Database references' 12 9 'Structure model' 'Derived calculations' 13 10 'Structure model' 'Data collection' 14 10 'Structure model' 'Structure summary' 15 11 'Structure model' 'Atomic model' 16 11 'Structure model' 'Data collection' 17 11 'Structure model' 'Database references' 18 11 'Structure model' 'Derived calculations' 19 11 'Structure model' 'Non-polymer description' 20 11 'Structure model' 'Polymer sequence' 21 11 'Structure model' 'Source and taxonomy' 22 11 'Structure model' 'Structure summary' 23 12 'Structure model' 'Atomic model' 24 12 'Structure model' 'Data collection' 25 12 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 10 'Structure model' pdbx_molecule_features 2 11 'Structure model' atom_site 3 11 'Structure model' chem_comp 4 11 'Structure model' database_2 5 11 'Structure model' entity 6 11 'Structure model' entity_poly 7 11 'Structure model' entity_poly_seq 8 11 'Structure model' pdbx_entity_nonpoly 9 11 'Structure model' pdbx_entity_src_syn 10 11 'Structure model' pdbx_molecule 11 11 'Structure model' pdbx_nonpoly_scheme 12 11 'Structure model' pdbx_poly_seq_scheme 13 11 'Structure model' pdbx_struct_assembly_gen 14 11 'Structure model' struct_asym 15 11 'Structure model' struct_conn 16 11 'Structure model' struct_ref 17 11 'Structure model' struct_ref_seq 18 11 'Structure model' struct_site 19 11 'Structure model' struct_site_gen 20 12 'Structure model' atom_site 21 12 'Structure model' chem_comp_atom 22 12 'Structure model' chem_comp_bond 23 12 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 10 'Structure model' '_pdbx_molecule_features.details' 2 11 'Structure model' '_atom_site.Cartn_x' 3 11 'Structure model' '_atom_site.Cartn_y' 4 11 'Structure model' '_atom_site.Cartn_z' 5 11 'Structure model' '_atom_site.auth_asym_id' 6 11 'Structure model' '_atom_site.auth_atom_id' 7 11 'Structure model' '_atom_site.auth_comp_id' 8 11 'Structure model' '_atom_site.auth_seq_id' 9 11 'Structure model' '_atom_site.group_PDB' 10 11 'Structure model' '_atom_site.label_asym_id' 11 11 'Structure model' '_atom_site.label_atom_id' 12 11 'Structure model' '_atom_site.label_comp_id' 13 11 'Structure model' '_atom_site.label_entity_id' 14 11 'Structure model' '_atom_site.label_seq_id' 15 11 'Structure model' '_atom_site.type_symbol' 16 11 'Structure model' '_chem_comp.formula' 17 11 'Structure model' '_chem_comp.formula_weight' 18 11 'Structure model' '_chem_comp.id' 19 11 'Structure model' '_chem_comp.mon_nstd_flag' 20 11 'Structure model' '_chem_comp.name' 21 11 'Structure model' '_chem_comp.type' 22 11 'Structure model' '_database_2.pdbx_DOI' 23 11 'Structure model' '_database_2.pdbx_database_accession' 24 11 'Structure model' '_entity.details' 25 11 'Structure model' '_entity.formula_weight' 26 11 'Structure model' '_entity.pdbx_description' 27 11 'Structure model' '_entity.pdbx_number_of_molecules' 28 11 'Structure model' '_entity.type' 29 11 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 30 11 'Structure model' '_pdbx_poly_seq_scheme.entity_id' 31 11 'Structure model' '_pdbx_poly_seq_scheme.mon_id' 32 11 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 33 11 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 34 11 'Structure model' '_struct_ref_seq.pdbx_db_accession' 35 11 'Structure model' '_struct_ref_seq.ref_id' 36 11 'Structure model' '_struct_site.pdbx_num_residues' 37 12 'Structure model' '_atom_site.auth_atom_id' 38 12 'Structure model' '_atom_site.label_atom_id' 39 12 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Felix2000 'data collection' . ? 1 X-PLOR refinement . ? 2 FELIX2000 'data reduction' . ? 3 # _pdbx_entry_details.entry_id 1KQE _pdbx_entry_details.compound_details ;GRAMICIDIN IS A HETEROGENEOUS MIXTURE OF SEVERAL COMPOUNDS INCLUDING GRAMICIDIN A, B AND C WHICH ARE OBTAINED FROM BACILLUS BREVIS AND CALLED COLLECTIVELY GRAMICIDIN D HERE, A MODIFIDED GRAMICIDIN A IS REPRESENTED BY TWO SEQUENCES (SEQRES) AND ONE HET (SIN) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A DLE 14 ? ? O E TRP 11 ? ? 1.52 2 1 O A TRP 11 ? ? H E DLE 14 ? ? 1.53 3 1 O B TRP 11 ? ? H D DLE 14 ? ? 1.55 4 1 H B DLE 14 ? ? O D TRP 11 ? ? 1.56 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 DVA A 8 ? ? 124.00 165.26 2 1 TRP A 13 ? ? -161.16 101.64 3 1 DVA B 8 ? ? 125.10 167.57 4 1 TRP B 13 ? ? -160.06 100.74 5 1 TRP B 15 ? ? -156.63 38.50 6 1 DVA D 8 ? ? 125.02 167.21 7 1 TRP D 15 ? ? -156.98 42.47 8 1 DVA E 8 ? ? 124.12 165.85 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 TRP A 15 ? ? 13.52 2 1 TRP E 15 ? ? 13.77 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 DLE N N N N 14 DLE CA C N R 15 DLE CB C N N 16 DLE CG C N N 17 DLE CD1 C N N 18 DLE CD2 C N N 19 DLE C C N N 20 DLE O O N N 21 DLE OXT O N N 22 DLE H H N N 23 DLE H2 H N N 24 DLE HA H N N 25 DLE HB2 H N N 26 DLE HB3 H N N 27 DLE HG H N N 28 DLE HD11 H N N 29 DLE HD12 H N N 30 DLE HD13 H N N 31 DLE HD21 H N N 32 DLE HD22 H N N 33 DLE HD23 H N N 34 DLE HXT H N N 35 DVA N N N N 36 DVA CA C N R 37 DVA CB C N N 38 DVA CG1 C N N 39 DVA CG2 C N N 40 DVA C C N N 41 DVA O O N N 42 DVA OXT O N N 43 DVA H H N N 44 DVA H2 H N N 45 DVA HA H N N 46 DVA HB H N N 47 DVA HG11 H N N 48 DVA HG12 H N N 49 DVA HG13 H N N 50 DVA HG21 H N N 51 DVA HG22 H N N 52 DVA HG23 H N N 53 DVA HXT H N N 54 ETA CA C N N 55 ETA N N N N 56 ETA C C N N 57 ETA O O N N 58 ETA HA1 H N N 59 ETA HA2 H N N 60 ETA H H N N 61 ETA H2 H N N 62 ETA HB1 H N N 63 ETA HB2 H N N 64 ETA HO H N N 65 TRP N N N N 66 TRP CA C N S 67 TRP C C N N 68 TRP O O N N 69 TRP CB C N N 70 TRP CG C Y N 71 TRP CD1 C Y N 72 TRP CD2 C Y N 73 TRP NE1 N Y N 74 TRP CE2 C Y N 75 TRP CE3 C Y N 76 TRP CZ2 C Y N 77 TRP CZ3 C Y N 78 TRP CH2 C Y N 79 TRP OXT O N N 80 TRP H H N N 81 TRP H2 H N N 82 TRP HA H N N 83 TRP HB2 H N N 84 TRP HB3 H N N 85 TRP HD1 H N N 86 TRP HE1 H N N 87 TRP HE3 H N N 88 TRP HZ2 H N N 89 TRP HZ3 H N N 90 TRP HH2 H N N 91 TRP HXT H N N 92 VAL N N N N 93 VAL CA C N S 94 VAL C C N N 95 VAL O O N N 96 VAL CB C N N 97 VAL CG1 C N N 98 VAL CG2 C N N 99 VAL OXT O N N 100 VAL H H N N 101 VAL H2 H N N 102 VAL HA H N N 103 VAL HB H N N 104 VAL HG11 H N N 105 VAL HG12 H N N 106 VAL HG13 H N N 107 VAL HG21 H N N 108 VAL HG22 H N N 109 VAL HG23 H N N 110 VAL HXT H N N 111 X5P N N N N 112 X5P CA C N S 113 X5P C C N N 114 X5P O O N N 115 X5P CB C N N 116 X5P C1 C N N 117 X5P O1 O N N 118 X5P C2 C N N 119 X5P C3 C N N 120 X5P C4 C N N 121 X5P O3 O N N 122 X5P OXT O N N 123 X5P O4 O N N 124 X5P H H N N 125 X5P HA H N N 126 X5P HB2 H N N 127 X5P HB1 H N N 128 X5P HB3 H N N 129 X5P H21 H N N 130 X5P H22 H N N 131 X5P H31 H N N 132 X5P H32 H N N 133 X5P HXT H N N 134 X5P H4 H N N 135 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 DLE N CA sing N N 13 DLE N H sing N N 14 DLE N H2 sing N N 15 DLE CA CB sing N N 16 DLE CA C sing N N 17 DLE CA HA sing N N 18 DLE CB CG sing N N 19 DLE CB HB2 sing N N 20 DLE CB HB3 sing N N 21 DLE CG CD1 sing N N 22 DLE CG CD2 sing N N 23 DLE CG HG sing N N 24 DLE CD1 HD11 sing N N 25 DLE CD1 HD12 sing N N 26 DLE CD1 HD13 sing N N 27 DLE CD2 HD21 sing N N 28 DLE CD2 HD22 sing N N 29 DLE CD2 HD23 sing N N 30 DLE C O doub N N 31 DLE C OXT sing N N 32 DLE OXT HXT sing N N 33 DVA N CA sing N N 34 DVA N H sing N N 35 DVA N H2 sing N N 36 DVA CA CB sing N N 37 DVA CA C sing N N 38 DVA CA HA sing N N 39 DVA CB CG1 sing N N 40 DVA CB CG2 sing N N 41 DVA CB HB sing N N 42 DVA CG1 HG11 sing N N 43 DVA CG1 HG12 sing N N 44 DVA CG1 HG13 sing N N 45 DVA CG2 HG21 sing N N 46 DVA CG2 HG22 sing N N 47 DVA CG2 HG23 sing N N 48 DVA C O doub N N 49 DVA C OXT sing N N 50 DVA OXT HXT sing N N 51 ETA CA N sing N N 52 ETA CA C sing N N 53 ETA CA HA1 sing N N 54 ETA CA HA2 sing N N 55 ETA N H sing N N 56 ETA N H2 sing N N 57 ETA C O sing N N 58 ETA C HB1 sing N N 59 ETA C HB2 sing N N 60 ETA O HO sing N N 61 TRP N CA sing N N 62 TRP N H sing N N 63 TRP N H2 sing N N 64 TRP CA C sing N N 65 TRP CA CB sing N N 66 TRP CA HA sing N N 67 TRP C O doub N N 68 TRP C OXT sing N N 69 TRP CB CG sing N N 70 TRP CB HB2 sing N N 71 TRP CB HB3 sing N N 72 TRP CG CD1 doub Y N 73 TRP CG CD2 sing Y N 74 TRP CD1 NE1 sing Y N 75 TRP CD1 HD1 sing N N 76 TRP CD2 CE2 doub Y N 77 TRP CD2 CE3 sing Y N 78 TRP NE1 CE2 sing Y N 79 TRP NE1 HE1 sing N N 80 TRP CE2 CZ2 sing Y N 81 TRP CE3 CZ3 doub Y N 82 TRP CE3 HE3 sing N N 83 TRP CZ2 CH2 doub Y N 84 TRP CZ2 HZ2 sing N N 85 TRP CZ3 CH2 sing Y N 86 TRP CZ3 HZ3 sing N N 87 TRP CH2 HH2 sing N N 88 TRP OXT HXT sing N N 89 VAL N CA sing N N 90 VAL N H sing N N 91 VAL N H2 sing N N 92 VAL CA C sing N N 93 VAL CA CB sing N N 94 VAL CA HA sing N N 95 VAL C O doub N N 96 VAL C OXT sing N N 97 VAL CB CG1 sing N N 98 VAL CB CG2 sing N N 99 VAL CB HB sing N N 100 VAL CG1 HG11 sing N N 101 VAL CG1 HG12 sing N N 102 VAL CG1 HG13 sing N N 103 VAL CG2 HG21 sing N N 104 VAL CG2 HG22 sing N N 105 VAL CG2 HG23 sing N N 106 VAL OXT HXT sing N N 107 X5P CB CA sing N N 108 X5P O C doub N N 109 X5P CA C sing N N 110 X5P CA N sing N N 111 X5P O3 C4 doub N N 112 X5P N C4 sing N N 113 X5P C4 C3 sing N N 114 X5P C2 C3 sing N N 115 X5P C2 C1 sing N N 116 X5P C1 O1 doub N N 117 X5P C OXT sing N N 118 X5P C1 O4 sing N N 119 X5P N H sing N N 120 X5P CA HA sing N N 121 X5P CB HB2 sing N N 122 X5P CB HB1 sing N N 123 X5P CB HB3 sing N N 124 X5P C2 H21 sing N N 125 X5P C2 H22 sing N N 126 X5P C3 H31 sing N N 127 X5P C3 H32 sing N N 128 X5P OXT HXT sing N N 129 X5P O4 H4 sing N N 130 #