data_1KQU # _entry.id 1KQU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1KQU RCSB RCSB015245 WWPDB D_1000015245 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1D4K 'HIV-1 PROTEASE COMPLEXED WITH A MACROCYCLIC PEPTIDOMIMETIC INHIBITOR' unspecified PDB 1D4L 'HIV-1 PROTEASE COMPLEXED WITH A MACROCYCLIC PEPTIDOMIMETIC INHIBITOR' unspecified PDB 1KQT 'HIV-1 PROTEASE COMPLEXED WITH A MACROCYCLIC PEPTIDOMIMETIC INHIBITOR' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KQU _pdbx_database_status.recvd_initial_deposition_date 2002-01-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tyndall, J.D.' 1 'Martin, J.L.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;D-Tyrosine as a chiral precusor to potent inhibitors of human nonpancreatic secretory phospholipase A2 (IIa) with antiinflammatory activity. ; Chembiochem 4 181 185 2003 ? GE 1439-4227 ? ? 12616631 10.1002/cbic.200390029 1 ;D-Tyrosine as a Chiral Precusor to Potent Inhibitors of Human Nonpancreatic Secretory Phospholipase A2 (IIa) with Antiinflammatory Activity ; Chembiochem 4 181 185 2003 ? GE 1439-4227 ? ? ? 10.1002/cbic.200390029 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hansford, K.A.' 1 primary 'Reid, R.C.' 2 primary 'Clark, C.I.' 3 primary 'Tyndall, J.D.' 4 primary 'Whitehouse, M.W.' 5 primary 'Guthrie, T.' 6 primary 'McGeary, R.P.' 7 primary 'Schafer, K.' 8 primary 'Martin, J.L.' 9 primary 'Fairlie, D.P.' 10 1 'Hansford, K.A.' 11 1 'Reid, R.C.' 12 1 'Clark, C.I.' 13 1 'Tyndall, J.D.' 14 1 'Whitehouse, M.W.' 15 1 'Guthrie, T.' 16 1 'McGeary, R.P.' 17 1 'Schafer, K.' 18 1 'Martin, J.L.' 19 1 'Fairlie, D.P.' 20 # _cell.entry_id 1KQU _cell.length_a 76.550 _cell.length_b 76.550 _cell.length_c 93.460 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KQU _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phospholipase A2, membrane associated' 13945.012 1 3.1.1.4 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 non-polymer syn '6-PHENYL-4(R)-(7-PHENYL-HEPTANOYLAMINO)-HEXANOIC ACID' 395.534 1 ? ? ? ? 4 water nat water 18.015 75 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Phosphatidylcholine 2-acylhydrolase, Group IIA phospholipase A2, GIIC sPLA2, Non-pancreatic secretory phospholipase A2, NPS-PLA2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;NLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQ DSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC ; _entity_poly.pdbx_seq_one_letter_code_can ;NLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQ DSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LEU n 1 3 VAL n 1 4 ASN n 1 5 PHE n 1 6 HIS n 1 7 ARG n 1 8 MET n 1 9 ILE n 1 10 LYS n 1 11 LEU n 1 12 THR n 1 13 THR n 1 14 GLY n 1 15 LYS n 1 16 GLU n 1 17 ALA n 1 18 ALA n 1 19 LEU n 1 20 SER n 1 21 TYR n 1 22 GLY n 1 23 PHE n 1 24 TYR n 1 25 GLY n 1 26 CYS n 1 27 HIS n 1 28 CYS n 1 29 GLY n 1 30 VAL n 1 31 GLY n 1 32 GLY n 1 33 ARG n 1 34 GLY n 1 35 SER n 1 36 PRO n 1 37 LYS n 1 38 ASP n 1 39 ALA n 1 40 THR n 1 41 ASP n 1 42 ARG n 1 43 CYS n 1 44 CYS n 1 45 VAL n 1 46 THR n 1 47 HIS n 1 48 ASP n 1 49 CYS n 1 50 CYS n 1 51 TYR n 1 52 LYS n 1 53 ARG n 1 54 LEU n 1 55 GLU n 1 56 LYS n 1 57 ARG n 1 58 GLY n 1 59 CYS n 1 60 GLY n 1 61 THR n 1 62 LYS n 1 63 PHE n 1 64 LEU n 1 65 SER n 1 66 TYR n 1 67 LYS n 1 68 PHE n 1 69 SER n 1 70 ASN n 1 71 SER n 1 72 GLY n 1 73 SER n 1 74 ARG n 1 75 ILE n 1 76 THR n 1 77 CYS n 1 78 ALA n 1 79 LYS n 1 80 GLN n 1 81 ASP n 1 82 SER n 1 83 CYS n 1 84 ARG n 1 85 SER n 1 86 GLN n 1 87 LEU n 1 88 CYS n 1 89 GLU n 1 90 CYS n 1 91 ASP n 1 92 LYS n 1 93 ALA n 1 94 ALA n 1 95 ALA n 1 96 THR n 1 97 CYS n 1 98 PHE n 1 99 ALA n 1 100 ARG n 1 101 ASN n 1 102 LYS n 1 103 THR n 1 104 THR n 1 105 TYR n 1 106 ASN n 1 107 LYS n 1 108 LYS n 1 109 TYR n 1 110 GLN n 1 111 TYR n 1 112 TYR n 1 113 SER n 1 114 ASN n 1 115 LYS n 1 116 HIS n 1 117 CYS n 1 118 ARG n 1 119 GLY n 1 120 SER n 1 121 THR n 1 122 PRO n 1 123 ARG n 1 124 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PA2GA_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCG TKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P14555 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KQU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 124 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P14555 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 144 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 124 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BR4 non-polymer . '6-PHENYL-4(R)-(7-PHENYL-HEPTANOYLAMINO)-HEXANOIC ACID' ? 'C25 H33 N O3' 395.534 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1KQU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 56.60 _exptl_crystal.density_Matthews 2.83 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_details 'sodium Chloride, Calcium Chloride, pH 7.8, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1999-01-04 _diffrn_detector.details 'YALE MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Ni FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 1KQU _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.10 _reflns.number_obs 9218 _reflns.number_all 9371 _reflns.percent_possible_obs 93.8 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.3 _reflns.B_iso_Wilson_estimate 20.8 _reflns.pdbx_redundancy 5.93 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 92.5 _reflns_shell.Rmerge_I_obs 0.346 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.18 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 898 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1KQU _refine.ls_number_reflns_obs 9218 _refine.ls_number_reflns_all 9218 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.001000 _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 94.8 _refine.ls_R_factor_obs 0.209 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.209 _refine.ls_R_factor_R_free 0.24 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.4 _refine.ls_number_reflns_R_free 955 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 33.4 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1POD' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1KQU _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.27 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.29 _refine_analyze.Luzzati_sigma_a_free 0.27 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 959 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 75 _refine_hist.number_atoms_total 1065 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.1 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.01 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.36 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.29 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.23 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 3.37 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.23 _refine_ls_shell.number_reflns_R_work 1318 _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.percent_reflns_obs 92.8 _refine_ls_shell.R_factor_R_free 0.295 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free 10.2 _refine_ls_shell.number_reflns_R_free 149 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1KQU _struct.title 'Human phospholipase A2 complexed with a substrate anologue' _struct.pdbx_descriptor 'Phospholipase A2, membrane associated (E.C.3.1.1.4)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KQU _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Phospholipase A2, Inhibitor, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 1 ? GLY A 14 ? ASN A 1 GLY A 14 1 ? 14 HELX_P HELX_P2 2 GLU A 16 ? TYR A 21 ? GLU A 16 TYR A 21 1 ? 6 HELX_P HELX_P3 3 ASP A 38 ? ARG A 57 ? ASP A 38 ARG A 57 1 ? 20 HELX_P HELX_P4 4 ASP A 81 ? ASN A 101 ? ASP A 81 ASN A 101 1 ? 21 HELX_P HELX_P5 5 LYS A 102 ? TYR A 105 ? LYS A 102 TYR A 105 5 ? 4 HELX_P HELX_P6 6 SER A 113 ? CYS A 117 ? SER A 113 CYS A 117 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 117 SG ? ? A CYS 26 A CYS 117 1_555 ? ? ? ? ? ? ? 2.024 ? disulf2 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 28 A CYS 44 1_555 ? ? ? ? ? ? ? 2.023 ? disulf3 disulf ? ? A CYS 43 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 43 A CYS 97 1_555 ? ? ? ? ? ? ? 2.024 ? disulf4 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 124 SG ? ? A CYS 49 A CYS 124 1_555 ? ? ? ? ? ? ? 2.034 ? disulf5 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 90 SG ? ? A CYS 50 A CYS 90 1_555 ? ? ? ? ? ? ? 2.026 ? disulf6 disulf ? ? A CYS 59 SG ? ? ? 1_555 A CYS 83 SG ? ? A CYS 59 A CYS 83 1_555 ? ? ? ? ? ? ? 2.029 ? disulf7 disulf ? ? A CYS 77 SG ? ? ? 1_555 A CYS 88 SG ? ? A CYS 77 A CYS 88 1_555 ? ? ? ? ? ? ? 2.026 ? metalc1 metalc ? ? B CA . CA ? ? ? 1_555 A HIS 27 O ? ? A CA 301 A HIS 27 1_555 ? ? ? ? ? ? ? 2.402 ? metalc2 metalc ? ? B CA . CA ? ? ? 1_555 A GLY 29 O ? ? A CA 301 A GLY 29 1_555 ? ? ? ? ? ? ? 2.457 ? metalc3 metalc ? ? B CA . CA ? ? ? 1_555 A GLY 31 O ? ? A CA 301 A GLY 31 1_555 ? ? ? ? ? ? ? 2.450 ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 48 OD1 ? ? A CA 301 A ASP 48 1_555 ? ? ? ? ? ? ? 2.691 ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 48 OD2 ? ? A CA 301 A ASP 48 1_555 ? ? ? ? ? ? ? 2.534 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 D BR4 . O1 ? ? A CA 301 A BR4 501 1_555 ? ? ? ? ? ? ? 2.479 ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 D BR4 . O2 ? ? A CA 301 A BR4 501 1_555 ? ? ? ? ? ? ? 2.471 ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 A GLY 25 O ? ? A CA 302 A GLY 25 1_555 ? ? ? ? ? ? ? 2.454 ? metalc9 metalc ? ? C CA . CA ? ? ? 1_555 A TYR 112 O ? ? A CA 302 A TYR 112 1_555 ? ? ? ? ? ? ? 2.459 ? metalc10 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 302 A HOH 225 1_555 ? ? ? ? ? ? ? 2.451 ? metalc11 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 302 A HOH 232 1_555 ? ? ? ? ? ? ? 2.329 ? metalc12 metalc ? ? C CA . CA ? ? ? 1_555 A ASN 114 OD1 ? ? A CA 302 A ASN 114 1_555 ? ? ? ? ? ? ? 2.449 ? metalc13 metalc ? ? C CA . CA ? ? ? 1_555 A PHE 23 O ? ? A CA 302 A PHE 23 1_555 ? ? ? ? ? ? ? 2.559 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 68 ? ASN A 70 ? PHE A 68 ASN A 70 A 2 ILE A 75 ? CYS A 77 ? ILE A 75 CYS A 77 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id SER _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 69 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id SER _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 69 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id THR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 76 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id THR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 76 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CA A 301' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 302' AC3 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE BR4 A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 27 ? HIS A 27 . ? 1_555 ? 2 AC1 5 GLY A 29 ? GLY A 29 . ? 1_555 ? 3 AC1 5 GLY A 31 ? GLY A 31 . ? 1_555 ? 4 AC1 5 ASP A 48 ? ASP A 48 . ? 1_555 ? 5 AC1 5 BR4 D . ? BR4 A 501 . ? 1_555 ? 6 AC2 6 PHE A 23 ? PHE A 23 . ? 1_555 ? 7 AC2 6 GLY A 25 ? GLY A 25 . ? 1_555 ? 8 AC2 6 TYR A 112 ? TYR A 112 . ? 1_555 ? 9 AC2 6 ASN A 114 ? ASN A 114 . ? 1_555 ? 10 AC2 6 HOH E . ? HOH A 225 . ? 1_555 ? 11 AC2 6 HOH E . ? HOH A 232 . ? 1_555 ? 12 AC3 15 LEU A 2 ? LEU A 2 . ? 1_555 ? 13 AC3 15 ALA A 17 ? ALA A 17 . ? 1_555 ? 14 AC3 15 LEU A 19 ? LEU A 19 . ? 12_556 ? 15 AC3 15 TYR A 21 ? TYR A 21 . ? 1_555 ? 16 AC3 15 PHE A 23 ? PHE A 23 . ? 12_556 ? 17 AC3 15 HIS A 27 ? HIS A 27 . ? 1_555 ? 18 AC3 15 GLY A 29 ? GLY A 29 . ? 1_555 ? 19 AC3 15 VAL A 30 ? VAL A 30 . ? 1_555 ? 20 AC3 15 GLY A 31 ? GLY A 31 . ? 1_555 ? 21 AC3 15 HIS A 47 ? HIS A 47 . ? 1_555 ? 22 AC3 15 ASP A 48 ? ASP A 48 . ? 1_555 ? 23 AC3 15 TYR A 51 ? TYR A 51 . ? 1_555 ? 24 AC3 15 HOH E . ? HOH A 243 . ? 1_555 ? 25 AC3 15 HOH E . ? HOH A 253 . ? 1_555 ? 26 AC3 15 CA B . ? CA A 301 . ? 1_555 ? # _database_PDB_matrix.entry_id 1KQU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KQU _atom_sites.fract_transf_matrix[1][1] 0.013063 _atom_sites.fract_transf_matrix[1][2] 0.007542 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015084 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010700 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 TYR 21 21 21 TYR TYR A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 CYS 28 28 28 CYS CYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 HIS 47 47 47 HIS HIS A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 LYS 56 56 56 LYS ALA A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 CYS 59 59 59 CYS CYS A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 ARG 74 74 74 ARG ALA A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 LYS 79 79 79 LYS ALA A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 CYS 83 83 83 CYS CYS A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 CYS 90 90 90 CYS CYS A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 CYS 97 97 97 CYS CYS A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 LYS 108 108 108 LYS ALA A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 TYR 112 112 112 TYR TYR A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 HIS 116 116 116 HIS HIS A . n A 1 117 CYS 117 117 117 CYS CYS A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 ARG 123 123 123 ARG ALA A . n A 1 124 CYS 124 124 124 CYS CYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 268 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A HIS 27 ? A HIS 27 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? A GLY 29 ? A GLY 29 ? 1_555 93.9 ? 2 O ? A HIS 27 ? A HIS 27 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? A GLY 31 ? A GLY 31 ? 1_555 86.1 ? 3 O ? A GLY 29 ? A GLY 29 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O ? A GLY 31 ? A GLY 31 ? 1_555 81.8 ? 4 O ? A HIS 27 ? A HIS 27 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD1 ? A ASP 48 ? A ASP 48 ? 1_555 94.9 ? 5 O ? A GLY 29 ? A GLY 29 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD1 ? A ASP 48 ? A ASP 48 ? 1_555 146.4 ? 6 O ? A GLY 31 ? A GLY 31 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD1 ? A ASP 48 ? A ASP 48 ? 1_555 131.1 ? 7 O ? A HIS 27 ? A HIS 27 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 48 ? A ASP 48 ? 1_555 93.1 ? 8 O ? A GLY 29 ? A GLY 29 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 48 ? A ASP 48 ? 1_555 161.6 ? 9 O ? A GLY 31 ? A GLY 31 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 48 ? A ASP 48 ? 1_555 81.8 ? 10 OD1 ? A ASP 48 ? A ASP 48 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 OD2 ? A ASP 48 ? A ASP 48 ? 1_555 49.3 ? 11 O ? A HIS 27 ? A HIS 27 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O1 ? D BR4 . ? A BR4 501 ? 1_555 84.7 ? 12 O ? A GLY 29 ? A GLY 29 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O1 ? D BR4 . ? A BR4 501 ? 1_555 75.3 ? 13 O ? A GLY 31 ? A GLY 31 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O1 ? D BR4 . ? A BR4 501 ? 1_555 154.6 ? 14 OD1 ? A ASP 48 ? A ASP 48 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O1 ? D BR4 . ? A BR4 501 ? 1_555 73.3 ? 15 OD2 ? A ASP 48 ? A ASP 48 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O1 ? D BR4 . ? A BR4 501 ? 1_555 122.3 ? 16 O ? A HIS 27 ? A HIS 27 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O2 ? D BR4 . ? A BR4 501 ? 1_555 171.6 ? 17 O ? A GLY 29 ? A GLY 29 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O2 ? D BR4 . ? A BR4 501 ? 1_555 85.2 ? 18 O ? A GLY 31 ? A GLY 31 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O2 ? D BR4 . ? A BR4 501 ? 1_555 85.5 ? 19 OD1 ? A ASP 48 ? A ASP 48 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O2 ? D BR4 . ? A BR4 501 ? 1_555 90.4 ? 20 OD2 ? A ASP 48 ? A ASP 48 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O2 ? D BR4 . ? A BR4 501 ? 1_555 85.4 ? 21 O1 ? D BR4 . ? A BR4 501 ? 1_555 CA ? B CA . ? A CA 301 ? 1_555 O2 ? D BR4 . ? A BR4 501 ? 1_555 103.1 ? 22 O ? A GLY 25 ? A GLY 25 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? A TYR 112 ? A TYR 112 ? 1_555 90.8 ? 23 O ? A GLY 25 ? A GLY 25 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? E HOH . ? A HOH 225 ? 1_555 177.0 ? 24 O ? A TYR 112 ? A TYR 112 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? E HOH . ? A HOH 225 ? 1_555 91.9 ? 25 O ? A GLY 25 ? A GLY 25 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 86.3 ? 26 O ? A TYR 112 ? A TYR 112 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 171.2 ? 27 O ? E HOH . ? A HOH 225 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 91.2 ? 28 O ? A GLY 25 ? A GLY 25 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 OD1 ? A ASN 114 ? A ASN 114 ? 1_555 86.0 ? 29 O ? A TYR 112 ? A TYR 112 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 OD1 ? A ASN 114 ? A ASN 114 ? 1_555 97.3 ? 30 O ? E HOH . ? A HOH 225 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 OD1 ? A ASN 114 ? A ASN 114 ? 1_555 92.4 ? 31 O ? E HOH . ? A HOH 232 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 OD1 ? A ASN 114 ? A ASN 114 ? 1_555 90.7 ? 32 O ? A GLY 25 ? A GLY 25 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? A PHE 23 ? A PHE 23 ? 1_555 93.2 ? 33 O ? A TYR 112 ? A TYR 112 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? A PHE 23 ? A PHE 23 ? 1_555 89.5 ? 34 O ? E HOH . ? A HOH 225 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? A PHE 23 ? A PHE 23 ? 1_555 88.1 ? 35 O ? E HOH . ? A HOH 232 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? A PHE 23 ? A PHE 23 ? 1_555 82.4 ? 36 OD1 ? A ASN 114 ? A ASN 114 ? 1_555 CA ? C CA . ? A CA 302 ? 1_555 O ? A PHE 23 ? A PHE 23 ? 1_555 173.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-11-11 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' . ? 3 X-PLOR refinement 3.851 ? 4 X-PLOR phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 61 ? ? -132.23 -90.38 2 1 SER A 71 ? ? -109.43 64.83 3 1 LYS A 79 ? B -31.33 -74.37 4 1 GLN A 80 ? B 27.70 165.39 5 1 TYR A 111 ? ? -115.90 56.61 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 56 ? CG ? A LYS 56 CG 2 1 Y 1 A LYS 56 ? CD ? A LYS 56 CD 3 1 Y 1 A LYS 56 ? CE ? A LYS 56 CE 4 1 Y 1 A LYS 56 ? NZ ? A LYS 56 NZ 5 1 Y 1 A ARG 74 ? CG ? A ARG 74 CG 6 1 Y 1 A ARG 74 ? CD ? A ARG 74 CD 7 1 Y 1 A ARG 74 ? NE ? A ARG 74 NE 8 1 Y 1 A ARG 74 ? CZ ? A ARG 74 CZ 9 1 Y 1 A ARG 74 ? NH1 ? A ARG 74 NH1 10 1 Y 1 A ARG 74 ? NH2 ? A ARG 74 NH2 11 1 Y 1 A LYS 79 ? CG ? A LYS 79 CG 12 1 Y 1 A LYS 79 ? CD ? A LYS 79 CD 13 1 Y 1 A LYS 79 ? CE ? A LYS 79 CE 14 1 Y 1 A LYS 79 ? NZ ? A LYS 79 NZ 15 1 Y 1 A LYS 108 ? CG ? A LYS 108 CG 16 1 Y 1 A LYS 108 ? CD ? A LYS 108 CD 17 1 Y 1 A LYS 108 ? CE ? A LYS 108 CE 18 1 Y 1 A LYS 108 ? NZ ? A LYS 108 NZ 19 1 Y 1 A ARG 123 ? CG ? A ARG 123 CG 20 1 Y 1 A ARG 123 ? CD ? A ARG 123 CD 21 1 Y 1 A ARG 123 ? NE ? A ARG 123 NE 22 1 Y 1 A ARG 123 ? CZ ? A ARG 123 CZ 23 1 Y 1 A ARG 123 ? NH1 ? A ARG 123 NH1 24 1 Y 1 A ARG 123 ? NH2 ? A ARG 123 NH2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 '6-PHENYL-4(R)-(7-PHENYL-HEPTANOYLAMINO)-HEXANOIC ACID' BR4 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 301 301 CA CA A . C 2 CA 1 302 302 CA CA A . D 3 BR4 1 501 501 BR4 BR4 A . E 4 HOH 1 201 201 HOH HOH A . E 4 HOH 2 202 202 HOH HOH A . E 4 HOH 3 203 203 HOH HOH A . E 4 HOH 4 204 204 HOH HOH A . E 4 HOH 5 205 205 HOH HOH A . E 4 HOH 6 206 206 HOH HOH A . E 4 HOH 7 207 207 HOH HOH A . E 4 HOH 8 208 208 HOH HOH A . E 4 HOH 9 209 209 HOH HOH A . E 4 HOH 10 210 210 HOH HOH A . E 4 HOH 11 211 211 HOH HOH A . E 4 HOH 12 212 212 HOH HOH A . E 4 HOH 13 213 213 HOH HOH A . E 4 HOH 14 214 214 HOH HOH A . E 4 HOH 15 215 215 HOH HOH A . E 4 HOH 16 216 216 HOH HOH A . E 4 HOH 17 217 217 HOH HOH A . E 4 HOH 18 218 218 HOH HOH A . E 4 HOH 19 219 219 HOH HOH A . E 4 HOH 20 220 220 HOH HOH A . E 4 HOH 21 221 221 HOH HOH A . E 4 HOH 22 222 222 HOH HOH A . E 4 HOH 23 223 223 HOH HOH A . E 4 HOH 24 224 224 HOH HOH A . E 4 HOH 25 225 225 HOH HOH A . E 4 HOH 26 226 226 HOH HOH A . E 4 HOH 27 227 227 HOH HOH A . E 4 HOH 28 228 228 HOH HOH A . E 4 HOH 29 229 229 HOH HOH A . E 4 HOH 30 230 230 HOH HOH A . E 4 HOH 31 231 231 HOH HOH A . E 4 HOH 32 232 232 HOH HOH A . E 4 HOH 33 233 233 HOH HOH A . E 4 HOH 34 234 234 HOH HOH A . E 4 HOH 35 235 235 HOH HOH A . E 4 HOH 36 236 236 HOH HOH A . E 4 HOH 37 237 237 HOH HOH A . E 4 HOH 38 238 238 HOH HOH A . E 4 HOH 39 239 239 HOH HOH A . E 4 HOH 40 240 240 HOH HOH A . E 4 HOH 41 241 241 HOH HOH A . E 4 HOH 42 242 242 HOH HOH A . E 4 HOH 43 243 243 HOH HOH A . E 4 HOH 44 244 244 HOH HOH A . E 4 HOH 45 245 245 HOH HOH A . E 4 HOH 46 246 246 HOH HOH A . E 4 HOH 47 247 247 HOH HOH A . E 4 HOH 48 248 248 HOH HOH A . E 4 HOH 49 249 249 HOH HOH A . E 4 HOH 50 250 250 HOH HOH A . E 4 HOH 51 251 251 HOH HOH A . E 4 HOH 52 252 252 HOH HOH A . E 4 HOH 53 253 253 HOH HOH A . E 4 HOH 54 254 254 HOH HOH A . E 4 HOH 55 255 255 HOH HOH A . E 4 HOH 56 256 256 HOH HOH A . E 4 HOH 57 257 257 HOH HOH A . E 4 HOH 58 258 258 HOH HOH A . E 4 HOH 59 259 259 HOH HOH A . E 4 HOH 60 260 260 HOH HOH A . E 4 HOH 61 261 261 HOH HOH A . E 4 HOH 62 262 262 HOH HOH A . E 4 HOH 63 263 263 HOH HOH A . E 4 HOH 64 264 264 HOH HOH A . E 4 HOH 65 265 265 HOH HOH A . E 4 HOH 66 266 266 HOH HOH A . E 4 HOH 67 267 267 HOH HOH A . E 4 HOH 68 268 268 HOH HOH A . E 4 HOH 69 269 269 HOH HOH A . E 4 HOH 70 270 270 HOH HOH A . E 4 HOH 71 271 271 HOH HOH A . E 4 HOH 72 272 272 HOH HOH A . E 4 HOH 73 273 273 HOH HOH A . E 4 HOH 74 274 274 HOH HOH A . E 4 HOH 75 275 275 HOH HOH A . #