HEADER HYDROLASE 09-JAN-02 1KRF TITLE STRUCTURE OF P. CITRINUM ALPHA 1,2-MANNOSIDASE REVEALS THE BASIS FOR TITLE 2 DIFFERENCES IN SPECIFICITY OF THE ER AND GOLGI CLASS I ENZYMES CAVEAT 1KRF NAG C 2 HAS WRONG CHIRALITY AT ATOM C1 NAG D 2 HAS WRONG CAVEAT 2 1KRF CHIRALITY AT ATOM C1 MAN D 3 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 1KRF NAG E 2 HAS WRONG CHIRALITY AT ATOM C1 NAG F 2 HAS WRONG CAVEAT 4 1KRF CHIRALITY AT ATOM C1 NAG G 2 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 5 1KRF MAN G 3 HAS WRONG CHIRALITY AT ATOM C1 NAG H 2 HAS WRONG CAVEAT 6 1KRF CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MAN(9)-ALPHA-MANNOSIDASE; COMPND 5 EC: 3.2.1.113; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PENICILLIUM CITRINUM; SOURCE 3 ORGANISM_TAXID: 5077; SOURCE 4 GENE: MSDC; SOURCE 5 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 5062; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: MS2; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTAPM1 KEYWDS (ALPHA/ALPHA)7-BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.D.LOBSANOV,F.VALLEE,A.IMBERTY,T.YOSHIDA,P.YIP,A.HERSCOVICS, AUTHOR 2 P.L.HOWELL REVDAT 7 06-NOV-24 1KRF 1 REMARK REVDAT 6 16-AUG-23 1KRF 1 HETSYN REVDAT 5 29-JUL-20 1KRF 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 13-JUL-11 1KRF 1 VERSN REVDAT 3 24-FEB-09 1KRF 1 VERSN REVDAT 2 01-APR-03 1KRF 1 JRNL REVDAT 1 20-FEB-02 1KRF 0 JRNL AUTH Y.D.LOBSANOV,F.VALLEE,A.IMBERTY,T.YOSHIDA,P.YIP, JRNL AUTH 2 A.HERSCOVICS,P.L.HOWELL JRNL TITL STRUCTURE OF PENICILLIUM CITRINUM ALPHA 1,2-MANNOSIDASE JRNL TITL 2 REVEALS THE BASIS FOR DIFFERENCES IN SPECIFICITY OF THE JRNL TITL 3 ENDOPLASMIC RETICULUM AND GOLGI CLASS I ENZYMES. JRNL REF J.BIOL.CHEM. V. 277 5620 2002 JRNL REFN ISSN 0021-9258 JRNL PMID 11714724 JRNL DOI 10.1074/JBC.M110243200 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 51385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.180 REMARK 3 FREE R VALUE TEST SET COUNT : 5233 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7448 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 268 REMARK 3 SOLVENT ATOMS : 196 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KRF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-02. REMARK 100 THE DEPOSITION ID IS D_1000015263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-00 REMARK 200 TEMPERATURE (KELVIN) : 293.0 REMARK 200 PH : 4.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : YALE MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57692 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.910 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : 0.07400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.37600 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1KKT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, POTASSIUM PHOSPHATE, PH REMARK 280 4.60, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 55.49850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 LEU A 3 REMARK 465 PRO A 4 REMARK 465 VAL A 5 REMARK 465 SER A 6 REMARK 465 PHE A 7 REMARK 465 PRO A 8 REMARK 465 LEU A 9 REMARK 465 THR A 10 REMARK 465 VAL A 11 REMARK 465 LEU A 12 REMARK 465 SER A 13 REMARK 465 LEU A 14 REMARK 465 LEU A 15 REMARK 465 GLY A 16 REMARK 465 SER A 17 REMARK 465 THR A 18 REMARK 465 ILE A 19 REMARK 465 ALA A 20 REMARK 465 HIS A 21 REMARK 465 PRO A 22 REMARK 465 TYR A 23 REMARK 465 GLY A 24 REMARK 465 GLU A 25 REMARK 465 THR A 26 REMARK 465 GLU A 27 REMARK 465 ALA A 28 REMARK 465 VAL A 29 REMARK 465 LEU A 30 REMARK 465 ARG A 31 REMARK 465 SER A 32 REMARK 465 GLU A 33 REMARK 465 PRO A 34 REMARK 465 LYS A 35 REMARK 465 ASN A 511 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 LEU B 3 REMARK 465 PRO B 4 REMARK 465 VAL B 5 REMARK 465 SER B 6 REMARK 465 PHE B 7 REMARK 465 PRO B 8 REMARK 465 LEU B 9 REMARK 465 THR B 10 REMARK 465 VAL B 11 REMARK 465 LEU B 12 REMARK 465 SER B 13 REMARK 465 LEU B 14 REMARK 465 LEU B 15 REMARK 465 GLY B 16 REMARK 465 SER B 17 REMARK 465 THR B 18 REMARK 465 ILE B 19 REMARK 465 ALA B 20 REMARK 465 HIS B 21 REMARK 465 PRO B 22 REMARK 465 TYR B 23 REMARK 465 GLY B 24 REMARK 465 GLU B 25 REMARK 465 THR B 26 REMARK 465 GLU B 27 REMARK 465 ALA B 28 REMARK 465 VAL B 29 REMARK 465 LEU B 30 REMARK 465 ARG B 31 REMARK 465 SER B 32 REMARK 465 GLU B 33 REMARK 465 PRO B 34 REMARK 465 LYS B 35 REMARK 465 ASN B 511 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 111 4.12 -66.37 REMARK 500 ARG A 126 -66.68 -99.97 REMARK 500 ASN A 148 106.70 -55.20 REMARK 500 ASP A 266 -51.25 -122.72 REMARK 500 ASP A 267 -76.88 -14.77 REMARK 500 ASP A 280 92.54 -160.80 REMARK 500 ARG A 321 -11.62 76.18 REMARK 500 TRP A 379 20.01 -147.60 REMARK 500 VAL A 405 42.06 -104.91 REMARK 500 PHE B 111 12.96 -62.64 REMARK 500 ARG B 126 -64.27 -98.64 REMARK 500 LEU B 145 -40.85 -147.69 REMARK 500 ASP B 252 -70.82 -77.98 REMARK 500 ASP B 267 -77.13 -13.97 REMARK 500 SER B 319 -95.00 -111.44 REMARK 500 ARG B 321 -26.70 73.32 REMARK 500 TRP B 379 19.94 -141.37 REMARK 500 SER B 401 114.15 -160.82 REMARK 500 VAL B 405 43.26 -104.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 550 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 501 O REMARK 620 2 THR A 501 OG1 71.7 REMARK 620 3 KIF A 901 O3 73.1 120.1 REMARK 620 4 KIF A 901 O2 86.5 67.9 63.0 REMARK 620 5 HOH A1026 O 86.1 149.8 69.7 132.3 REMARK 620 6 HOH A1027 O 148.2 128.3 75.2 81.1 81.0 REMARK 620 7 HOH A1028 O 142.5 72.7 137.4 91.1 121.3 67.4 REMARK 620 8 HOH A1029 O 86.0 84.8 138.2 152.7 73.2 117.3 79.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 551 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 501 O REMARK 620 2 THR B 501 OG1 69.8 REMARK 620 3 KIF B 902 O3 70.5 116.6 REMARK 620 4 KIF B 902 O2 82.2 66.6 60.7 REMARK 620 5 HOH B 936 O 86.3 87.3 136.1 153.7 REMARK 620 6 HOH B 937 O 86.2 149.3 70.0 130.5 71.8 REMARK 620 7 HOH B 938 O 144.8 129.2 74.2 81.1 120.1 81.4 REMARK 620 8 HOH B 958 O 147.9 79.0 133.6 92.7 84.5 119.6 63.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KKT RELATED DB: PDB REMARK 900 STRUCTURE OF P. CITRINUM ALPHA 1,2-MANNOSIDASE REVEALS THE BASIS REMARK 900 FOR DIFFERENCES IN SPECIFICITY OF THE ER AND GOLGI CLASS I ENZYMES REMARK 900 RELATED ID: 1KRE RELATED DB: PDB REMARK 900 STRUCTURE OF P. CITRINUM ALPHA 1,2-MANNOSIDASE REVEALS THE BASIS REMARK 900 FOR DIFFERENCES IN SPECIFICITY OF THE ER AND GOLGI CLASS I ENZYMES DBREF 1KRF A 1 511 UNP P31723 MA12_PENCI 1 511 DBREF 1KRF B 1 511 UNP P31723 MA12_PENCI 1 511 SEQRES 1 A 511 MET ARG LEU PRO VAL SER PHE PRO LEU THR VAL LEU SER SEQRES 2 A 511 LEU LEU GLY SER THR ILE ALA HIS PRO TYR GLY GLU THR SEQRES 3 A 511 GLU ALA VAL LEU ARG SER GLU PRO LYS SER ASN GLN ALA SEQRES 4 A 511 LYS ALA ASP ALA VAL LYS GLU ALA PHE GLN HIS ALA TRP SEQRES 5 A 511 ASN GLY TYR MET LYS TYR ALA PHE PRO HIS ASP GLU LEU SEQRES 6 A 511 THR PRO VAL SER ASN GLY HIS ALA ASP SER ARG ASN GLY SEQRES 7 A 511 TRP GLY ALA SER ALA VAL ASP ALA LEU SER THR ALA VAL SEQRES 8 A 511 ILE MET GLY LYS ALA ASP VAL VAL ASN ALA ILE LEU GLU SEQRES 9 A 511 HIS VAL ALA ASP ILE ASP PHE SER LYS THR SER ASP THR SEQRES 10 A 511 VAL SER LEU PHE GLU THR THR ILE ARG TYR LEU ALA GLY SEQRES 11 A 511 MET LEU SER GLY TYR ASP LEU LEU GLN GLY PRO ALA LYS SEQRES 12 A 511 ASN LEU VAL ASP ASN GLN ASP LEU ILE ASP GLY LEU LEU SEQRES 13 A 511 ASP GLN SER ARG ASN LEU ALA ASP VAL LEU LYS PHE ALA SEQRES 14 A 511 PHE ASP THR PRO SER GLY VAL PRO TYR ASN ASN ILE ASN SEQRES 15 A 511 ILE THR SER HIS GLY ASN ASP GLY ALA THR THR ASN GLY SEQRES 16 A 511 LEU ALA VAL THR GLY THR LEU VAL LEU GLU TRP THR ARG SEQRES 17 A 511 LEU SER ASP LEU THR GLY ASP GLU GLU TYR ALA LYS LEU SEQRES 18 A 511 SER GLN LYS ALA GLU SER TYR LEU LEU LYS PRO GLN PRO SEQRES 19 A 511 SER SER SER GLU PRO PHE PRO GLY LEU VAL GLY SER SER SEQRES 20 A 511 ILE ASN ILE ASN ASP GLY GLN PHE ALA ASP SER ARG VAL SEQRES 21 A 511 SER TRP ASN GLY GLY ASP ASP SER PHE TYR GLU TYR LEU SEQRES 22 A 511 ILE LYS MET TYR VAL TYR ASP PRO LYS ARG PHE GLU THR SEQRES 23 A 511 TYR LYS ASP ARG TRP VAL LEU ALA ALA GLU SER THR ILE SEQRES 24 A 511 LYS HIS LEU LYS SER HIS PRO LYS SER ARG PRO ASP LEU SEQRES 25 A 511 THR PHE LEU SER SER TYR SER ASN ARG ASN TYR ASP LEU SEQRES 26 A 511 SER SER GLN HIS LEU THR CYS PHE ASP GLY GLY SER PHE SEQRES 27 A 511 LEU LEU GLY GLY THR VAL LEU ASP ARG GLN ASP PHE ILE SEQRES 28 A 511 ASP PHE GLY LEU GLU LEU VAL ASP GLY CYS GLU ALA THR SEQRES 29 A 511 TYR ASN SER THR LEU THR LYS ILE GLY PRO ASP SER TRP SEQRES 30 A 511 GLY TRP ASP PRO LYS LYS VAL PRO SER ASP GLN LYS GLU SEQRES 31 A 511 PHE TYR GLU LYS ALA GLY PHE TYR ILE SER SER GLY SER SEQRES 32 A 511 TYR VAL LEU ARG PRO GLU VAL ILE GLU SER PHE TYR TYR SEQRES 33 A 511 ALA HIS ARG VAL THR GLY LYS GLU ILE TYR ARG ASP TRP SEQRES 34 A 511 VAL TRP ASN ALA PHE VAL ALA ILE ASN SER THR CYS ARG SEQRES 35 A 511 THR ASP SER GLY PHE ALA ALA VAL SER ASP VAL ASN LYS SEQRES 36 A 511 ALA ASN GLY GLY SER LYS TYR ASP ASN GLN GLU SER PHE SEQRES 37 A 511 LEU PHE ALA GLU VAL MET LYS TYR SER TYR LEU ALA HIS SEQRES 38 A 511 SER GLU ASP ALA ALA TRP GLN VAL GLN LYS GLY GLY LYS SEQRES 39 A 511 ASN THR PHE VAL TYR ASN THR GLU ALA HIS PRO ILE SER SEQRES 40 A 511 VAL ALA ARG ASN SEQRES 1 B 511 MET ARG LEU PRO VAL SER PHE PRO LEU THR VAL LEU SER SEQRES 2 B 511 LEU LEU GLY SER THR ILE ALA HIS PRO TYR GLY GLU THR SEQRES 3 B 511 GLU ALA VAL LEU ARG SER GLU PRO LYS SER ASN GLN ALA SEQRES 4 B 511 LYS ALA ASP ALA VAL LYS GLU ALA PHE GLN HIS ALA TRP SEQRES 5 B 511 ASN GLY TYR MET LYS TYR ALA PHE PRO HIS ASP GLU LEU SEQRES 6 B 511 THR PRO VAL SER ASN GLY HIS ALA ASP SER ARG ASN GLY SEQRES 7 B 511 TRP GLY ALA SER ALA VAL ASP ALA LEU SER THR ALA VAL SEQRES 8 B 511 ILE MET GLY LYS ALA ASP VAL VAL ASN ALA ILE LEU GLU SEQRES 9 B 511 HIS VAL ALA ASP ILE ASP PHE SER LYS THR SER ASP THR SEQRES 10 B 511 VAL SER LEU PHE GLU THR THR ILE ARG TYR LEU ALA GLY SEQRES 11 B 511 MET LEU SER GLY TYR ASP LEU LEU GLN GLY PRO ALA LYS SEQRES 12 B 511 ASN LEU VAL ASP ASN GLN ASP LEU ILE ASP GLY LEU LEU SEQRES 13 B 511 ASP GLN SER ARG ASN LEU ALA ASP VAL LEU LYS PHE ALA SEQRES 14 B 511 PHE ASP THR PRO SER GLY VAL PRO TYR ASN ASN ILE ASN SEQRES 15 B 511 ILE THR SER HIS GLY ASN ASP GLY ALA THR THR ASN GLY SEQRES 16 B 511 LEU ALA VAL THR GLY THR LEU VAL LEU GLU TRP THR ARG SEQRES 17 B 511 LEU SER ASP LEU THR GLY ASP GLU GLU TYR ALA LYS LEU SEQRES 18 B 511 SER GLN LYS ALA GLU SER TYR LEU LEU LYS PRO GLN PRO SEQRES 19 B 511 SER SER SER GLU PRO PHE PRO GLY LEU VAL GLY SER SER SEQRES 20 B 511 ILE ASN ILE ASN ASP GLY GLN PHE ALA ASP SER ARG VAL SEQRES 21 B 511 SER TRP ASN GLY GLY ASP ASP SER PHE TYR GLU TYR LEU SEQRES 22 B 511 ILE LYS MET TYR VAL TYR ASP PRO LYS ARG PHE GLU THR SEQRES 23 B 511 TYR LYS ASP ARG TRP VAL LEU ALA ALA GLU SER THR ILE SEQRES 24 B 511 LYS HIS LEU LYS SER HIS PRO LYS SER ARG PRO ASP LEU SEQRES 25 B 511 THR PHE LEU SER SER TYR SER ASN ARG ASN TYR ASP LEU SEQRES 26 B 511 SER SER GLN HIS LEU THR CYS PHE ASP GLY GLY SER PHE SEQRES 27 B 511 LEU LEU GLY GLY THR VAL LEU ASP ARG GLN ASP PHE ILE SEQRES 28 B 511 ASP PHE GLY LEU GLU LEU VAL ASP GLY CYS GLU ALA THR SEQRES 29 B 511 TYR ASN SER THR LEU THR LYS ILE GLY PRO ASP SER TRP SEQRES 30 B 511 GLY TRP ASP PRO LYS LYS VAL PRO SER ASP GLN LYS GLU SEQRES 31 B 511 PHE TYR GLU LYS ALA GLY PHE TYR ILE SER SER GLY SER SEQRES 32 B 511 TYR VAL LEU ARG PRO GLU VAL ILE GLU SER PHE TYR TYR SEQRES 33 B 511 ALA HIS ARG VAL THR GLY LYS GLU ILE TYR ARG ASP TRP SEQRES 34 B 511 VAL TRP ASN ALA PHE VAL ALA ILE ASN SER THR CYS ARG SEQRES 35 B 511 THR ASP SER GLY PHE ALA ALA VAL SER ASP VAL ASN LYS SEQRES 36 B 511 ALA ASN GLY GLY SER LYS TYR ASP ASN GLN GLU SER PHE SEQRES 37 B 511 LEU PHE ALA GLU VAL MET LYS TYR SER TYR LEU ALA HIS SEQRES 38 B 511 SER GLU ASP ALA ALA TRP GLN VAL GLN LYS GLY GLY LYS SEQRES 39 B 511 ASN THR PHE VAL TYR ASN THR GLU ALA HIS PRO ILE SER SEQRES 40 B 511 VAL ALA ARG ASN MODRES 1KRF ASN A 182 ASN GLYCOSYLATION SITE MODRES 1KRF ASN A 366 ASN GLYCOSYLATION SITE MODRES 1KRF ASN A 438 ASN GLYCOSYLATION SITE MODRES 1KRF ASN B 182 ASN GLYCOSYLATION SITE MODRES 1KRF ASN B 366 ASN GLYCOSYLATION SITE MODRES 1KRF ASN B 438 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET MAN D 4 11 HET MAN D 5 11 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET MAN G 3 11 HET MAN G 4 11 HET MAN G 5 11 HET NAG H 1 14 HET NAG H 2 14 HET CA A 550 1 HET KIF A 901 16 HET CA B 551 1 HET KIF B 902 16 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETNAM KIF KIFUNENSINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 12(C8 H15 N O6) FORMUL 4 MAN 6(C6 H12 O6) FORMUL 9 CA 2(CA 2+) FORMUL 10 KIF 2(C8 H12 N2 O6) FORMUL 13 HOH *196(H2 O) HELIX 1 1 SER A 36 ALA A 59 1 24 HELIX 2 2 GLY A 80 GLY A 94 1 15 HELIX 3 3 LYS A 95 ASP A 108 1 14 HELIX 4 4 LEU A 120 ARG A 126 1 7 HELIX 5 5 ARG A 126 GLN A 139 1 14 HELIX 6 6 ASN A 148 LYS A 167 1 20 HELIX 7 7 PHE A 168 ASP A 171 5 4 HELIX 8 8 LEU A 196 THR A 201 1 6 HELIX 9 9 LEU A 202 GLY A 214 1 13 HELIX 10 10 GLU A 216 LYS A 231 1 16 HELIX 11 11 PRO A 234 GLU A 238 5 5 HELIX 12 12 ASP A 267 ASP A 280 1 14 HELIX 13 13 PHE A 284 LEU A 302 1 19 HELIX 14 14 LEU A 330 CYS A 332 5 3 HELIX 15 15 PHE A 333 ASP A 346 1 14 HELIX 16 16 ARG A 347 SER A 367 1 21 HELIX 17 17 ASP A 380 VAL A 384 5 5 HELIX 18 18 PRO A 385 ASP A 387 5 3 HELIX 19 19 GLN A 388 GLY A 396 1 9 HELIX 20 20 PRO A 408 GLY A 422 1 15 HELIX 21 21 LYS A 423 ARG A 442 1 20 HELIX 22 22 LYS A 455 GLY A 459 5 5 HELIX 23 23 SER A 467 GLU A 472 1 6 HELIX 24 24 GLU A 472 ALA A 480 1 9 HELIX 25 25 SER B 36 ALA B 59 1 24 HELIX 26 26 GLY B 80 MET B 93 1 14 HELIX 27 27 LYS B 95 ASP B 108 1 14 HELIX 28 28 LEU B 120 ARG B 126 1 7 HELIX 29 29 ARG B 126 GLN B 139 1 14 HELIX 30 30 ASN B 148 LYS B 167 1 20 HELIX 31 31 PHE B 168 ASP B 171 5 4 HELIX 32 32 LEU B 196 THR B 201 1 6 HELIX 33 33 LEU B 202 GLY B 214 1 13 HELIX 34 34 GLU B 216 LYS B 231 1 16 HELIX 35 35 PRO B 234 GLU B 238 5 5 HELIX 36 36 ASP B 267 ASP B 280 1 14 HELIX 37 37 PHE B 284 LEU B 302 1 19 HELIX 38 38 CYS B 332 LEU B 345 1 14 HELIX 39 39 ARG B 347 SER B 367 1 21 HELIX 40 40 ASP B 380 VAL B 384 5 5 HELIX 41 41 GLN B 388 GLY B 396 1 9 HELIX 42 42 PRO B 408 GLY B 422 1 15 HELIX 43 43 LYS B 423 ARG B 442 1 20 HELIX 44 44 LYS B 455 GLY B 459 5 5 HELIX 45 45 SER B 467 GLU B 472 1 6 HELIX 46 46 GLU B 472 ALA B 480 1 9 SHEET 1 A 2 GLU A 64 THR A 66 0 SHEET 2 A 2 GLY A 71 ALA A 73 -1 O ALA A 73 N GLU A 64 SHEET 1 B 3 VAL A 118 SER A 119 0 SHEET 2 B 3 ASN A 180 ASN A 182 -1 O ILE A 181 N VAL A 118 SHEET 3 B 3 GLY A 187 ASN A 188 -1 O GLY A 187 N ASN A 182 SHEET 1 C 2 THR A 193 GLY A 195 0 SHEET 2 C 2 SER A 247 ASN A 249 -1 O ILE A 248 N ASN A 194 SHEET 1 D 2 LYS A 303 SER A 304 0 SHEET 2 D 2 PHE A 314 LEU A 315 -1 O PHE A 314 N SER A 304 SHEET 1 E 2 SER A 317 SER A 319 0 SHEET 2 E 2 ASN A 322 ASP A 324 -1 O ASP A 324 N SER A 317 SHEET 1 F 3 SER A 326 GLN A 328 0 SHEET 2 F 3 SER A 376 GLY A 378 -1 O TRP A 377 N SER A 327 SHEET 3 F 3 TYR A 398 SER A 401 -1 O TYR A 398 N GLY A 378 SHEET 1 G 2 PHE A 497 TYR A 499 0 SHEET 2 G 2 PRO A 505 SER A 507 -1 O ILE A 506 N VAL A 498 SHEET 1 H 2 GLU B 64 THR B 66 0 SHEET 2 H 2 GLY B 71 ALA B 73 -1 O ALA B 73 N GLU B 64 SHEET 1 I 3 VAL B 118 SER B 119 0 SHEET 2 I 3 ASN B 180 ASN B 182 -1 O ILE B 181 N VAL B 118 SHEET 3 I 3 GLY B 187 ASN B 188 -1 O GLY B 187 N ASN B 182 SHEET 1 J 2 THR B 193 GLY B 195 0 SHEET 2 J 2 SER B 247 ASN B 249 -1 O ILE B 248 N ASN B 194 SHEET 1 K 2 LYS B 303 SER B 304 0 SHEET 2 K 2 PHE B 314 LEU B 315 -1 O PHE B 314 N SER B 304 SHEET 1 L 2 SER B 317 TYR B 318 0 SHEET 2 L 2 TYR B 323 ASP B 324 -1 O ASP B 324 N SER B 317 SHEET 1 M 3 SER B 326 GLN B 328 0 SHEET 2 M 3 SER B 376 GLY B 378 -1 O TRP B 377 N SER B 327 SHEET 3 M 3 TYR B 398 SER B 401 -1 O TYR B 398 N GLY B 378 SHEET 1 N 2 PHE B 497 TYR B 499 0 SHEET 2 N 2 PRO B 505 SER B 507 -1 O ILE B 506 N VAL B 498 SSBOND 1 CYS A 332 CYS A 361 1555 1555 2.03 SSBOND 2 CYS B 332 CYS B 361 1555 1555 2.03 LINK ND2 ASN A 182 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 366 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN A 438 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN B 182 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN B 366 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN B 438 C1 NAG H 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.39 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.40 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.39 LINK O3 MAN D 3 C1 MAN D 4 1555 1555 1.40 LINK O6 MAN D 3 C1 MAN D 5 1555 1555 1.40 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.38 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.39 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.40 LINK O4 NAG G 2 C1 MAN G 3 1555 1555 1.39 LINK O3 MAN G 3 C1 MAN G 4 1555 1555 1.40 LINK O6 MAN G 3 C1 MAN G 5 1555 1555 1.40 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.39 LINK O THR A 501 CA CA A 550 1555 1555 2.56 LINK OG1 THR A 501 CA CA A 550 1555 1555 2.56 LINK CA CA A 550 O3 KIF A 901 1555 1555 2.70 LINK CA CA A 550 O2 KIF A 901 1555 1555 2.64 LINK CA CA A 550 O HOH A1026 1555 1555 2.65 LINK CA CA A 550 O HOH A1027 1555 1555 2.66 LINK CA CA A 550 O HOH A1028 1555 1555 2.64 LINK CA CA A 550 O HOH A1029 1555 1555 2.68 LINK O THR B 501 CA CA B 551 1555 1555 2.61 LINK OG1 THR B 501 CA CA B 551 1555 1555 2.65 LINK CA CA B 551 O3 KIF B 902 1555 1555 2.82 LINK CA CA B 551 O2 KIF B 902 1555 1555 2.68 LINK CA CA B 551 O HOH B 936 1555 1555 2.69 LINK CA CA B 551 O HOH B 937 1555 1555 2.65 LINK CA CA B 551 O HOH B 938 1555 1555 2.68 LINK CA CA B 551 O HOH B 958 1555 1555 2.77 CISPEP 1 PHE A 60 PRO A 61 0 0.37 CISPEP 2 GLN A 233 PRO A 234 0 -0.06 CISPEP 3 PHE B 60 PRO B 61 0 0.40 CISPEP 4 GLN B 233 PRO B 234 0 -0.18 CRYST1 56.487 110.997 86.235 90.00 99.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017703 0.000000 0.002858 0.00000 SCALE2 0.000000 0.009009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011746 0.00000